Citrus Sinensis ID: 002517

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910---
Protein Sequence
MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKKLLSFADDEEEKSEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHcccccccccccHHHHcccccccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEccccccccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccEEEEEccEccccccccHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEcccccEEEcccccccccccccHHcccEEcccccccHHHHHHHHHHHcccccccHHHHccccccHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHc
Coil and Loop (DISEMBL)
msssrarnfrrradddednnddntpsaatttatkkppssskpkkllsfaddeeekseiptsnrdrtrpssrlskpssshkitaskerqsssatssstsLLSNVQAQAGTYTEEYLLELRKNtktlkapsskppaepvvvlrgsikpedsnltrvqqkpsrdssdsdsdhkaETEKRFASLgvgkiavqsgviydEAEIKAIRAKKDRLrqsgakapdyipldggssslrgdaegssdeepefprrvamfgertasgkkkkgvfedddvdederpvvarvendyeyvdedvMWEEEQVRKGLgkriddgsvrvgantsssvampqqqqqfsysttvtpipsiggaigasqgldTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQtnlpvkldefgrdmnLQKRRDMERRAESrqhrrtrfdlkqlssmdadissqklegesttdesdseTEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSsyrdaymslstpaimspyvrlellkwdplhedadfsemkWHNLLFnyglpkdgedfahddadanlvpTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSgvwagpsvtgscchklqPLVDFMLSLAKTLekkhlpgvteseTAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Flexible Loop (DISEMBL)
msssrarnfrrradddednnddntpsaatttatkkppssskpkkllsfaddeeekseiptsnrdrtrpssrlskpssshkitaskerqsssatssstsllsnvqAQAGTYTEEYLLELRKNtktlkapsskppaepvvvlrgsikpedsnltrvqqkpsrdssdsdsdhkaetekrfaslgvgkiavqsgviydeaEIKAIRAKkdrlrqsgakapdyipldggssslrgdaegssdeepefprrvamfgertasgkkkkgvfedddvdederpvvarvendyeyvdedvmweEEQVRkglgkriddgsvRVGANtsssvampqqqQQFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLkeshartmsslkktdedlssSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILErraadnddeMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKeqtnlpvkldefgrdmnlqkrrdmerraesrqhrrtrfdlkqlssmdadissqklegesttdesdseTEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRsiasnvhdaisRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLekkhlpgvtesetaglARRLKKMLVELneydnardiaRTFHLKEAL
Low Complexity Region (SEG)
MSSSrarnfrrradddednnddntpsaatttatkkppssskpkkLLSFADDEEEKSEIPTSNRDRTrpssrlskpsssHKITASKERQsssatssstsllsNVQAQAGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRdssdsdsdHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGvfedddvdederpvvarveNDYEYVDEDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNsaskliaassaaqaaaaaaVKEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGesttdesdseteAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Disordered region (IsUnstruct)
*************************************************************************************************************YTEEYLL*************************************************************ASLGVGKIAVQSGVIYDEAEIKAI**************************************************************************VARVENDYEYVDEDVMWEE****************************************************************************************************************SAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLE*******************************AIKAATLVIG*************************************************************************************************************IFS*AAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVT****AGLARRLKKMLVELNEYDNARDIART*******
Disordered Region (DISOPRED)
******R*********************************************************************************************************************************************************************************************EIK*********************************************************************************************************************************************************************************************************************FIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEA***********************************************************************************************************SNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNY****************NLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLA****PNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGV****************LVDFMLSLAK*****************LARRLKKMLVELNEYDNARDIARTFHLKEAL
Disordered Region (DISEMBL)
******************************************************************************************************VQAQAGTYTEEYLLELRKNTK***********EPVVVLRGSIKPEDS**************************RFASLGVGKIAVQSGVIYDEAEIKAIRA*********AKAPDYIPLDGGSSS*************EFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLGKRIDDGSVRVGA******************TTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLI***************EQTNLPVKLDEFGRDMNLQK**************RTRFDLKQLSSMD**************************NREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Disordered Region (DISPRO)
*********************************************************************************************************************LRKN*************EPVVV*RGSIK********************************************GVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSL****************RVAMFGERTA****K****EDDDV*********************VMWEEEQVRK*L******************************STTVTPI*S***********DTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIG**********A*S*A**************LPVKLDEFGRDMNLQKRRDMER******HRRTR****************************SETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKD*****HDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKKLLSFADDEEEKSEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDTMSIxxxxxxxxxxxxxxxxxxxxxHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYxxxxxxxxxxxxxxxxxxxxxxxxxxxxDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	913	2.2.26 [Sep-21-2011]
Q9Y5B6	917	GC-rich sequence DNA-bind	yes	no	0.728	0.725	0.261	5e-47
P58501	917	GC-rich sequence DNA-bind	yes	no	0.731	0.728	0.261	3e-45
P16383	781	GC-rich sequence DNA-bind	no	no	0.654	0.765	0.219	3e-30
Q8BKT3	769	GC-rich sequence DNA-bind	no	no	0.330	0.392	0.238	9e-23

>sp|Q9Y5B6|GCFC1_HUMAN GC-rich sequence DNA-binding factor 1 OS=Homo sapiens GN=GCFC1 PE=1 SV=2

 Score =  190 bits (482), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 198/758 (26%), Positives = 333/758 (43%), Gaps = 93/758 (12%)

Query: 186 AVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLD---GGSSSLRGDAEGSSDEEPEF 242
            ++ G I D A I A R K+   R+ G    D+ P D   G    +R D   +SD+E + 
Sbjct: 213 VLRPGEIPDAAFIHAARKKRQMARELG----DFTPHDNEPGKGRLVREDENDASDDEDDD 268

Query: 243 PRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLG 302
            +R  +F  +  S ++K  + E+  ++  +   +   E D    +E   WE+EQ+RKG+ 
Sbjct: 269 EKRRIVFSVKEKSQRQK--IAEEIGIEGSDDDALVTGEQD----EELSRWEQEQIRKGIN 322

Query: 303 KRIDDGSVRVGANTSSSVAMPQQQ--QQFSYSTTVTPIPSIGGAIGAS----QGLDTMSI 356
                   +V A+  + V M  Q   Q   Y ++   IP    A G+S    Q  D    
Sbjct: 323 ------IPQVQASQPAEVNMYYQNTYQTMPYGSSYG-IPYSYTAYGSSDAKSQKTDNTVP 375

Query: 357 AQKAESAM---------KALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLS 407
            +   + M         K L+  ++ +KE H       +K  +    S   I  LE S  
Sbjct: 376 FKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSG 435

Query: 408 AAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEM 467
             GE++ F+Q++R YV  + +   +K P I  LE+ + +L K+RAS +++RR  D  DE 
Sbjct: 436 GIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDES 495

Query: 468 TEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQK 527
           +E                         SS +  A  A           LD FGRD  L +
Sbjct: 496 SEF------------------------SSHSNKALMAP---------NLDSFGRDRALYQ 522

Query: 528 RRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDE-SDSETEAYQSNREELL 586
                R AE    R  R   ++ +   AD     LEG S+ DE + ++   +   ++ + 
Sbjct: 523 EHAKRRIAEREARRTRRRQAREQTGKMAD----HLEGLSSDDEETSTDITNFNLEKDRIS 578

Query: 587 KTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWD 646
           K +  +F D  E +  +  +K +FE W+  Y +SY+DAY+ L  P + +P +RL+LL W 
Sbjct: 579 KESGKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWT 638

Query: 647 PLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCW 705
           PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV LP L       W
Sbjct: 639 PLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVILPKLTVIAENMW 696

Query: 706 DMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCLAEAVANIAVPTW 757
           D  ST +T   V  T+ ++   P+   A        LK LL+ +   L +   ++ +P +
Sbjct: 697 DPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTLDD---DVFMPLY 753

Query: 758 SSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVR 816
               +    +   +   R F  SV+L+ N   W  +F+   L++L++D LL R +L   +
Sbjct: 754 PKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYILMAFQ 813

Query: 817 SIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVT 876
           + +    D+I + + ++      W           +L+    +++ LA T+ +  + G +
Sbjct: 814 N-SEYGDDSIKKAQNVINCFPKQWFMNLKGERTISQLENFCRYLVHLADTIYRNSI-GCS 871

Query: 877 ESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
           + E       +K   K+L  +   D+A  +A   ++KE
Sbjct: 872 DVEKRNARENIKQIVKLLASVRALDHAMSVASDHNVKE 909

Possible transcription factor.
Homo sapiens (taxid: 9606)

>sp|P58501|GCFC1_MOUSE GC-rich sequence DNA-binding factor 1 OS=Mus musculus GN=Gcfc1 PE=1 SV=2

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 198/757 (26%), Positives = 331/757 (43%), Gaps = 89/757 (11%)

Query: 186 AVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLD---GGSSSLRGDAEGSSDEEPEF 242
            ++ G I D A I A R K+   R+ G    D+ P D   G    +R D   +SD+E + 
Sbjct: 213 VLRPGEIPDAAFIHAARKKRQLARELG----DFTPHDSEPGKGRLVREDENDASDDEDDD 268

Query: 243 PRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLG 302
            +R  +F  +  S ++K  + E+  ++  +   +   E D    +E   WE+EQ+RKG  
Sbjct: 269 EKRRIVFSVKEKSQRQK--IAEEIGIEGSDDDALVTGEQD----EELSRWEQEQIRKG-- 320

Query: 303 KRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGAS----QGLDTMSIAQ 358
             I+   V+    +  +V      Q   Y  +   IP    A G+S    Q  D     +
Sbjct: 321 --INIPQVQASQPSEVNVYYQNTYQTMPYGASYG-IPYSYTAYGSSDAKSQKTDNTVPFK 377

Query: 359 KAESAM---------KALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAA 409
              + M         + L+  ++ +KE H       +K  +    S   I  LE S    
Sbjct: 378 TPSNEMAPVTIDLVKRQLKDRLDSMKELHKTNQQQHEKHLQSRVDSTRAIERLEGSSGGI 437

Query: 410 GEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTE 469
           GE++ F+Q++R YV  + +   +K P I  LE+ + +L K+RAS +++RR  D  DE +E
Sbjct: 438 GERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSE 497

Query: 470 VEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRR 529
             +    A             L+A +                    LD FGRD  L +  
Sbjct: 498 FSSHSSQA-------------LMAPN--------------------LDSFGRDRALYQEH 524

Query: 530 DMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDS-ETEAYQSNREELLKT 588
              R AE    R  R   ++ +   AD     LEG S+ DE  S +   +   ++ +LK 
Sbjct: 525 AKRRIAEREARRTRRRQAREQTGQMAD----HLEGLSSDDEETSTDITNFNLEKDRILKE 580

Query: 589 AEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPL 648
           +  +F D  E +  +  +K +FE W+  Y  SY+DAY+ L  P + +P +RL+LL W PL
Sbjct: 581 SSKVFEDVLESFYSIDCIKAQFEAWRSKYYMSYKDAYIGLCLPKLFNPLIRLQLLTWTPL 640

Query: 649 HEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDM 707
                DF  M W   L  YG  +D E    D+AD  L+PT+VEKV LP L       WD 
Sbjct: 641 EAKCRDFETMLWFESLLFYGC-EDREQ-EKDEADVALLPTIVEKVILPKLTVIAETMWDP 698

Query: 708 LSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCLAEAVANIAVPTWSS 759
            ST +T   V  T+ ++   P+   A        LK LL+ +   L +   ++ +P +  
Sbjct: 699 FSTTQTSRMVGITMKLINGYPSVVNADNKNTQVYLKALLLRMRRTLDD---DVFMPLYPK 755

Query: 760 LAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSI 818
             +    +   +   R F  SV+L+ N   W  +F+   L++L++D LL R +L   ++ 
Sbjct: 756 NVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYILMAFQN- 814

Query: 819 ASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTES 878
           +    D+I + + ++      W           +L+    +++ LA T+ +  + G ++ 
Sbjct: 815 SEYGDDSIRKAQNVINCFPKQWFVNLKGERTISQLENFCRYLVHLADTIYRNSI-GCSDV 873

Query: 879 ETAGLARRLK---KMLVELNEYDNARDIARTFHLKEA 912
           E       +K   K+L  +   D+A  +A   ++KE 
Sbjct: 874 EKRNARENIKQIVKLLASVRALDHAISVASDHNVKEV 910

Possible transcription factor.

Mus musculus (taxid: 10090)

>sp|P16383|GCFC2_HUMAN GC-rich sequence DNA-binding factor 2 OS=Homo sapiens GN=GCFC2 PE=1 SV=2

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 155/707 (21%), Positives = 306/707 (43%), Gaps = 109/707 (15%)

Query: 182 VGKIAVQSGV-IYDEAEIKAIRAKKDRLRQSGAKAPDYIPLD----GGSSSLRGDAEGSS 236
           +G+  + S V I D A I+A R K++  R       DYI LD       S ++ ++E   
Sbjct: 123 LGEKELSSTVKIPDAAFIQAARRKRELARAQD----DYISLDVQHTSSISGMKRESEDDP 178

Query: 237 DEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDV---MWE 293
           + EP+   +   F  R  + +++                ++R E   E   ED     WE
Sbjct: 179 ESEPDDHEKRIPFTLRPQTLRQRMA-----------EESISRNEETSEESQEDEKQDTWE 227

Query: 294 EEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDT 353
           ++Q+RK + K I++  + +     SS       ++F  S +  P+               
Sbjct: 228 QQQMRKAV-KIIEERDIDLSCGNGSSKV-----KKFDTSISFPPV--------------- 266

Query: 354 MSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKF 413
                  E   K L T +  L+E+H   +   +K  +D+ SS   I +LESS S      
Sbjct: 267 -----NLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESS-SNQALNC 320

Query: 414 IFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAA 473
            F + ++ YV  + D L +K   I+ +E+ M  L  ++A   ++RR  +   E T ++  
Sbjct: 321 KFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQ- 379

Query: 474 IKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRRDMER 533
                             ++       +   +V E+T   ++                  
Sbjct: 380 ------------------LSRKDETSTSGNFSVDEKTQWILE------------------ 403

Query: 534 RAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDS-ETEAYQSNREELLKTAEHI 592
             ESR+ +R     +Q   +  + + Q  EG S+ DE  S E   +Q ++ ++L+  + +
Sbjct: 404 EIESRRTKR-----RQARVLSGNCNHQ--EGTSSDDELPSAEMIDFQKSQGDILQKQKKV 456

Query: 593 FSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLH-ED 651
           F +  +++  +  +  +F++W+  +  SY +A++SL  P +++P +R++L+ W+PL  E 
Sbjct: 457 FEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLES 516

Query: 652 ADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTR 711
               EM W   +  +      +      +D  ++  ++ K  +P L   + + WD LST 
Sbjct: 517 TGLKEMPWFKSVEEFMDSSVEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTS 576

Query: 712 ETKNAVSATILVMAYVPTS----SEALKDLLVAIHTCLAEAVA-NIAVPTWSSLAMSAVP 766
           +T + ++   +++    T     S++ +DLL +I + + +AV  ++ +P +     SAV 
Sbjct: 577 QTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPK---SAVE 633

Query: 767 NA----ARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNV 822
           N     ++    +F   ++L RNI LW  +     L++L L +LL R ++  + + A+  
Sbjct: 634 NKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLN-ATPG 692

Query: 823 HDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEK 869
            D + +  ++ A L   W   S   +   +L+  + F+L  A  L +
Sbjct: 693 PDVVKKCNQVAACLPEKWFENSAMRTSIPQLENFIQFLLQSAHKLSR 739

Factor that represses transcription. It binds to the GC-rich sequences (5'-GCGGGGC-3') present in the epidermal growth factor receptor, beta-actin, and calcium-dependent protease promoters.

Homo sapiens (taxid: 9606)

>sp|Q8BKT3|GCFC2_MOUSE GC-rich sequence DNA-binding factor 2 OS=Mus musculus GN=Gcfc2 PE=1 SV=2

 Score =  109 bits (273), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 154/314 (49%), Gaps = 12/314 (3%)

Query: 563 EGESTTDE-SDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSY 621
           EG S+ DE S +E   +   + ++L+  + +F D  +++  +  +  +F++W+  +  SY
Sbjct: 415 EGMSSDDELSPAEMTNFHKCQGDILQDCKKVFEDVHDDFCNVQNILLKFQQWREKFPDSY 474

Query: 622 RDAYMSLSTPAIMSPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDD- 679
            +A++    P ++SP +R++LL W+PL  D+    +M W   +  + +    +D   +D 
Sbjct: 475 YEAFVGFCLPKLLSPLIRVQLLDWNPLKMDSIGLDKMPWFTAITEF-MESSMDDIGKEDG 533

Query: 680 ADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALK---D 736
           +D  ++  ++ K  +P L   +   WD LST +T++      +      + +E  K   D
Sbjct: 534 SDKKILAAVINKTVVPRLTDFVETIWDPLSTSQTRSLTVHCRVAFEQFASENEVSKNKQD 593

Query: 737 LLVAIHTCLAEAVA-NIAVPTW--SSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVF 793
           LL +I   + +++  +I +P +  SS      P+ ++    +F  +++L RNI LW  + 
Sbjct: 594 LLKSIVARMKKSIEDDIFIPLYPKSSEEGKMSPH-SKFQERQFWGALKLFRNILLWNGLL 652

Query: 794 ALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKL 853
               L+ L L +LL R ++  + + A    D + +  +I A L   W   S   +   +L
Sbjct: 653 PDDTLQDLGLGKLLNRYLIISLTN-AVPGPDVVKKCSQIAACLPERWFENSAMRTSIPQL 711

Query: 854 QPLVDFMLSLAKTL 867
           +  + F+L  A+ L
Sbjct: 712 ENFIKFLLQSAQKL 725

Factor that represses transcription. It binds to the GC-rich sequences (5'-GCGGGGC-3') present in the epidermal growth factor receptor, beta-actin, and calcium-dependent protease promoters.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	913
359472706	913	PREDICTED: GC-rich sequence DNA-binding	0.943	0.943	0.586	0.0
449434664	920	PREDICTED: GC-rich sequence DNA-binding	0.970	0.963	0.589	0.0
449493506	889	PREDICTED: GC-rich sequence DNA-binding	0.948	0.974	0.592	0.0
356577171	904	PREDICTED: GC-rich sequence DNA-binding	0.963	0.973	0.567	0.0
255544183	885	gc-rich sequence DNA-binding factor, put	0.951	0.981	0.582	0.0
357481093	892	GC-rich sequence DNA-binding factor-like	0.943	0.965	0.569	0.0
356519824	913	PREDICTED: GC-rich sequence DNA-binding	0.963	0.963	0.551	0.0
356523352	896	PREDICTED: GC-rich sequence DNA-binding	0.948	0.966	0.564	0.0
15242310	908	GC-rich sequence DNA-binding factor [Ara	0.961	0.966	0.539	0.0
297810973	908	increased level of polyploidy1-1D [Arabi	0.959	0.964	0.541	0.0

>gi|359472706|ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Vitis vinifera]

 Score =  986 bits (2549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/962 (58%), Positives = 681/962 (70%), Gaps = 101/962 (10%)

Query: 3   SSRARNFRRRADDDEDNNDDNTPSAATTTATKKPP-------------------SSSKPK 43
           SSR RNFRRRA                 T    PP                      KP 
Sbjct: 2   SSRPRNFRRRA----------DDDDNDDTNGDGPPLIKPTSKPSTTTATTAAAAKPKKPP 51

Query: 44  KLLSFADDEEEKSEIPTSNRDRTRPSSRLSKPSS---------SHKITASKERQSSSATS 94
           KLLSFADDEE +S    S+   T+P SR SK SS         SHKIT +K+R     T 
Sbjct: 52  KLLSFADDEENESPS-RSSSRSTQPPSRPSKTSSRFTKLSSSSSHKITTTKDR----LTP 106

Query: 95  SSTSLLSNVQAQAGTYTEEYLLELRKNTKTLKA--PSS---KPPAEPVVVLRGSIKP--- 146
           SS SL SNVQ QAGTYT+E L EL+KNT+TL +  P+S   KP  EPV+VL+G +KP   
Sbjct: 107 SSASLPSNVQPQAGTYTKEALRELQKNTRTLASSRPASSEPKPSLEPVIVLKGLVKPISA 166

Query: 147 -EDSNL---TRVQQKPSRDSSDSDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIR 202
            ED+ +      ++  S+D    DS                        I D+A I AIR
Sbjct: 167 AEDAVIDEENVEEEPESKDKGGRDS------------------------IPDQATINAIR 202

Query: 203 AKKDRLRQSGAKAPDYIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGV 262
           AK++RLRQS A APDYI LDGGS+   G AEG SDEEPEF  R+AMFGE+  SGKK  GV
Sbjct: 203 AKRERLRQSRAAAPDYISLDGGSN--HGAAEGLSDEEPEFQGRIAMFGEKPESGKK--GV 258

Query: 263 FEDDDVDEDERPVVARVENDYEYVDEDVMWEEE---QVRKGLGKRIDDGSVRVGANTSSS 319
           FED     DER +    + D    D++   +     Q RKGLGKR+DDGS RV +++   
Sbjct: 259 FED----VDERGMEGGFKKDAHDSDDEEEEKIWEEEQFRKGLGKRMDDGSSRVVSSSVPV 314

Query: 320 VAMPQQQQQFSYS--TTVTPIP------SIGGAIGASQGLDTMSIAQKAESAMKALQTNV 371
           V    QQQ+F YS  T  T +P      +IGGA+G   G D MS++Q+AE A KAL  N+
Sbjct: 315 VQK-VQQQKFMYSSVTAYTSVPGVSAPLNIGGAVGPLPGFDAMSLSQQAELAKKALHENL 373

Query: 372 NRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQ 431
            RLKESH RTMSSL +TDE+LSSSL  IT LE SL+AAGEKFIFMQ LRD+VSVICDFLQ
Sbjct: 374 RRLKESHGRTMSSLTRTDENLSSSLSNITTLEKSLTAAGEKFIFMQXLRDFVSVICDFLQ 433

Query: 432 DKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKL 491
            KAP+IE LE +MQKL++ERASAILERRAADND EM E++A++ AA  V    G S   +
Sbjct: 434 HKAPFIEELEEQMQKLHEERASAILERRAADND-EMMEIQASVDAAMSVFTKSG-SNEAM 491

Query: 492 IAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLS 551
           +AA+  A  AA+AA++EQTNLPVKLDE+GRD+NLQK  D  RR+E+RQ +R R+D K+++
Sbjct: 492 VAAARTAAQAASAAMREQTNLPVKLDEYGRDINLQKCMDKNRRSEARQRKRDRWDAKRMT 551

Query: 552 SMDADISSQKLEGESTTDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFE 611
            ++ + S QK+EGES+TDESDSET AYQSNR+ LL+TAE IF DAAEEYSQLS VKER E
Sbjct: 552 FLENESSHQKIEGESSTDESDSETTAYQSNRDLLLQTAEQIFGDAAEEYSQLSAVKERIE 611

Query: 612 KWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKD 671
           +WK+ YSSSYRDAYMSLS PAI SPYVRLELLKWDPL+E+ADF +MKWH+LLFNYGL +D
Sbjct: 612 RWKKQYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLYEEADFDDMKWHSLLFNYGLSED 671

Query: 672 GEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSS 731
           G DF+ DDADANLVP LVE+VALPILHH++A+CWD+ STRETKNAVSAT LV+ Y+P SS
Sbjct: 672 GNDFSPDDADANLVPELVERVALPILHHELAHCWDIFSTRETKNAVSATNLVIRYIPASS 731

Query: 732 EALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKE 791
           EAL +LL  +H  L +A+ N  VP W+ L M AVPNAAR+AAYRFG+S+RLMRNICLWK+
Sbjct: 732 EALGELLAVVHKRLYKALTNFMVPPWNILVMKAVPNAARVAAYRFGMSIRLMRNICLWKD 791

Query: 792 VFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCH 851
           + ALP+LEKL LD+LL  +VLPH+ +IAS+VHDAI+RTERI++SLSGVWAGPSVTG   +
Sbjct: 792 ILALPVLEKLVLDQLLSGQVLPHIENIASDVHDAITRTERIISSLSGVWAGPSVTGERSN 851

Query: 852 KLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKE 911
           KLQPLVD++L L K LEK+HLPGVTES+T+ LARRLK+MLVELNEYD ARDI+RTFHLKE
Sbjct: 852 KLQPLVDYVLRLGKRLEKRHLPGVTESDTSRLARRLKRMLVELNEYDKARDISRTFHLKE 911

Query: 912 AL 913
           AL
Sbjct: 912 AL 913

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434664|ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis sativus]

 Score =  961 bits (2485), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/947 (58%), Positives = 702/947 (74%), Gaps = 61/947 (6%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPS--------SSKPKK-------L 45
           MS SRARNFRRRADD++D+++    +A + +A+             ++KPKK       L
Sbjct: 1   MSGSRARNFRRRADDNDDDDEPKGSTAPSISASNASSKPSSTSSVVATKPKKANPQGLKL 60

Query: 46  LSFADDEEEKSEI----PTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLS 101
           LSFA DEE  + +      S+  +   S+RL+KPSS+HKITA K+R + S++ S++   S
Sbjct: 61  LSFASDEENDAPLRPSSSKSSSSKKPSSARLAKPSSTHKITALKDRIAHSSSISASVP-S 119

Query: 102 NVQAQAGTYTEEYLLELRKNTKTLKA--PSS--KPPAEPVVVLRGSIKPEDSNLTRVQQK 157
           NVQ QAG YT+E L EL+KNT+TL +  PSS  KP AEPV+VL+G +KP        +Q 
Sbjct: 120 NVQPQAGVYTKEALRELQKNTRTLASSRPSSESKPSAEPVIVLKGLLKP-------AEQV 172

Query: 158 PSRDSSDSDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPD 217
           P  DS+    +  +E ++       G+       I D+A I AIRAK++R+RQ+G  APD
Sbjct: 173 P--DSAREAKESSSEDDE------AGRKDSSGSSIPDQATINAIRAKRERMRQAGVAAPD 224

Query: 218 YIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVA 277
           YI LD GS+  R      SDEE EFP R+AM G +  S KK  GVFE+     DE+ +  
Sbjct: 225 YISLDAGSN--RTAPGELSDEEAEFPGRIAMIGGKLESSKK--GVFEE----VDEQGIDG 276

Query: 278 RVENDYEYVDEDVMWEEE---QVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTT 334
              N  E+ DED   +     Q RKGLGKR+DDGS RV  +TS  V    Q Q   Y TT
Sbjct: 277 ARTNIIEHSDEDEEEKIWEEEQFRKGLGKRMDDGSTRV-ESTSVPVVPSVQPQNLIYPTT 335

Query: 335 V--TPIPS------IGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLK 386
           +  + +PS      IGG++  SQGLD +SI+Q+AE A  A+Q ++ RLKES+ RT  S+ 
Sbjct: 336 IGYSSVPSMSTATSIGGSVSISQGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVL 395

Query: 387 KTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQK 446
           KTDE+LS+SLLKITDLE +LSAAG+KF+FMQKLRD+VSVICDFLQ KAP+IE LE +MQK
Sbjct: 396 KTDENLSASLLKITDLEKALSAAGDKFMFMQKLRDFVSVICDFLQHKAPFIEELEEQMQK 455

Query: 447 LNKERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAV 506
           L++ERAS ++ERR ADNDDEM E+E A+KAA  ++  +G S+++++ A+++A  AA A  
Sbjct: 456 LHEERASTVVERRVADNDDEMVEIETAVKAAISILNKKG-SSNEMVTAATSAAQAAIALS 514

Query: 507 KEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGES 566
           +EQ NLP KLDEFGRD+NLQKR DM+RRAE+R+ RR+++D K+L+SM+ D   QK+EGES
Sbjct: 515 REQANLPTKLDEFGRDLNLQKRMDMKRRAEARKRRRSQYDSKRLASMEVD-GHQKVEGES 573

Query: 567 TTDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYM 626
           +TDESDS++ AYQSNR+ LL+TAE IFSDAAEE+SQLSVVK+RFE WKRDYS++YRDAYM
Sbjct: 574 STDESDSDSAAYQSNRDLLLQTAEQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYM 633

Query: 627 SLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVP 686
           SLS PAI SPYVRLELLKWDPLHE ADF +M WH+LLFNYG+P+DG DFA +DADANLVP
Sbjct: 634 SLSIPAIFSPYVRLELLKWDPLHESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVP 693

Query: 687 TLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLA 746
            LVEKVALPILHH+IA+CWDMLSTRET+NA  AT L+  YVP SSEAL +LLV I T L+
Sbjct: 694 ELVEKVALPILHHEIAHCWDMLSTRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLS 753

Query: 747 EAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDEL 806
            A+ ++ VPTW+SL   AVPNAARIAAYRFG+SVRLMRNICLWKE+ ALPILEKLAL+EL
Sbjct: 754 GAIEDLTVPTWNSLVTKAVPNAARIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEEL 813

Query: 807 LCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKT 866
           L  KVLPHVRSI +N+HDA++RTERI+ASL+GVW G  + G   HKLQPLVD++L L +T
Sbjct: 814 LYGKVLPHVRSITANIHDAVTRTERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRT 873

Query: 867 LEKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           LEKKH+ G+ ESET+GLARRLKKMLVELNEYDNARDIA+TFHLKEAL
Sbjct: 874 LEKKHISGIAESETSGLARRLKKMLVELNEYDNARDIAKTFHLKEAL 920

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493506|ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis sativus]

 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/936 (59%), Positives = 694/936 (74%), Gaps = 70/936 (7%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPS--------SSKPKKLLSFADDE 52
           MS SRARNFRRRADD++D+++    +A + +A+             ++KPKK        
Sbjct: 1   MSGSRARNFRRRADDNDDDDEPKGSTAPSISASNASSKPSSTSSVVATKPKKF------- 53

Query: 53  EEKSEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTE 112
           +E S            S+RL+KPSS+HKITA K+R + S++ S++   SNVQ QAG YT+
Sbjct: 54  QEPS------------SARLAKPSSTHKITALKDRIAHSSSISASVP-SNVQPQAGVYTK 100

Query: 113 EYLLELRKNTKTLKA--PSS--KPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDSD 168
           E L EL+KNT+TL +  PSS  KP AEPV+VL+G +KP        +Q P  DS+    +
Sbjct: 101 EALRELQKNTRTLASSRPSSESKPSAEPVIVLKGLLKP-------AEQVP--DSAREAKE 151

Query: 169 HKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSL 228
             +E ++       GK +  S  I D+A I AIRAK++R+RQ+G  APDYI LD GS+  
Sbjct: 152 SSSEDDE------AGKDSSGSS-IPDQATINAIRAKRERMRQAGVAAPDYISLDAGSN-- 202

Query: 229 RGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVDE 288
           R      SDEE EFP R+AM G +  S KK  GVFE+     DE+ +     N  E+ DE
Sbjct: 203 RTAPGELSDEEAEFPGRIAMIGGKLESSKK--GVFEE----VDEQGIDGARTNIIEHSDE 256

Query: 289 DVMWEEE---QVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTV--TPIPS--- 340
           D   +     Q RKGLGKR+DDGS RV  +TS  V    Q Q   Y TT+  + +PS   
Sbjct: 257 DEEEKIWEEEQFRKGLGKRMDDGSTRV-ESTSVPVVPSVQPQNLIYPTTIGYSSVPSVST 315

Query: 341 ---IGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLL 397
              IGG++  SQGLD +SI+Q+AE A  A+Q ++ RLKES+ RT  S+ KTDE+LS+SLL
Sbjct: 316 ATSIGGSVSISQGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLL 375

Query: 398 KITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILE 457
           KITDLE +LSAAG+KFIFMQKLRD+VSVICDFLQ KAP+IE LE +MQKL++ERAS ++E
Sbjct: 376 KITDLEKALSAAGDKFIFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVE 435

Query: 458 RRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLD 517
           RR ADNDDEM E+E A+KAA  ++  +G S++++I A+++A  AA A  +EQ NLP KLD
Sbjct: 436 RRVADNDDEMVEIETAVKAAISILNKKG-SSNEMITAATSAAQAAIALSREQANLPTKLD 494

Query: 518 EFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDSETEA 577
           EFGRD+NLQKR DM+RRAE+R+ RR+++D K+L+SM+ D   QK+EGES+TDESDS++ A
Sbjct: 495 EFGRDLNLQKRMDMKRRAEARKRRRSQYDSKRLASMEVD-GHQKVEGESSTDESDSDSAA 553

Query: 578 YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPY 637
           YQSNR+ LL+TAE IFSDAAEE+SQLSVVK+RFE WKRDYS++YRDAYMSLS PAI SPY
Sbjct: 554 YQSNRDLLLQTAEQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPY 613

Query: 638 VRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPIL 697
           VRLELLKWDPLHE ADF +M WH+LLFNYG+P+DG DFA +DADANLVP LVEKVALPIL
Sbjct: 614 VRLELLKWDPLHESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVPELVEKVALPIL 673

Query: 698 HHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTW 757
           HH+IA+CWDMLSTRET+NA  AT L+  YVP SSEAL +LLV I T L+ A+ ++ VPTW
Sbjct: 674 HHEIAHCWDMLSTRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLSGAIEDLTVPTW 733

Query: 758 SSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRS 817
           +SL   AVPNAARIAAYRFG+SVRLMRNICLWKE+ ALPILEKLAL+ELL  KVLPHVRS
Sbjct: 734 NSLVTKAVPNAARIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEELLYGKVLPHVRS 793

Query: 818 IASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTE 877
           I +N+HDA++RTERI+ASL+GVW G  + G   HKLQPLVD++L L +TLEKKH+ G+ E
Sbjct: 794 ITANIHDAVTRTERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRTLEKKHISGIAE 853

Query: 878 SETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           SET+GLARRLKKMLVELNEYDNARDIA+TFHLKEAL
Sbjct: 854 SETSGLARRLKKMLVELNEYDNARDIAKTFHLKEAL 889

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577171|ref|XP_003556701.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]

 Score =  923 bits (2385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/937 (56%), Positives = 678/937 (72%), Gaps = 57/937 (6%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKK------LLSFADDEEE 54
           MS++++RNFRRR  DD ++NDDN     +TT   KPPSS+KPKK      LLSFADDE+E
Sbjct: 1   MSTAKSRNFRRRGGDDTESNDDNDGDTTSTTLPSKPPSSAKPKKKPQAPKLLSFADDEDE 60

Query: 55  KSEIPTSNRDRT-RPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTEE 113
             E P     +  R ++   KPSSSHKIT  K+R    A +SS S+ +NVQ QAGTYT+E
Sbjct: 61  TDENPRPRASKPHRTAATAKKPSSSHKITTLKDR---IAHTSSPSVPTNVQPQAGTYTKE 117

Query: 114 YLLELRKNTKTL-----KAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDS-SDSDS 167
            L EL+KNT+TL          KP +EPV+VL+G +KP         +   RDS SDS+ 
Sbjct: 118 ALRELQKNTRTLVSSSSSRSDPKPSSEPVIVLKGHVKPLGP------ETQGRDSDSDSEG 171

Query: 168 DHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSS 227
           +H+ E E + A++G+     +     DE  I+AIRAK++RLR +   APDYI LDGGS+ 
Sbjct: 172 EHR-EVEAKLATVGIQN--KEDSFYPDEETIRAIRAKRERLRLARPAAPDYISLDGGSN- 227

Query: 228 LRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVD 287
             G AEG SDEEPEF  R+AMFGE+   GKK  GVFE+     +ER V  R +   E V 
Sbjct: 228 -HGAAEGLSDEEPEFRGRIAMFGEKVDGGKK--GVFEE----VEERRVDLRFKGGEEEVL 280

Query: 288 EDVMWEEE------QVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSY--STTVTPIP 339
           +D   EEE      Q RKGLGKR+D+GS RV  N      +P   + +    S   +  P
Sbjct: 281 DDDDDEEEKMWEEEQFRKGLGKRMDEGSARVDHN----FVVPSAAKVYGAVPSAAASVSP 336

Query: 340 SIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKI 399
           SIGGAI +   LD + I+Q+AE+A KAL  NV RLKESH RTMSSL KTDE+LS+SLL I
Sbjct: 337 SIGGAIESLPVLDVVPISQQAEAARKALLENVRRLKESHGRTMSSLSKTDENLSASLLNI 396

Query: 400 TDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERR 459
           T LE+SL  A EK+ FMQKLR+YV+ ICDFLQ KA YIE LE +M+KL+++RASAI ERR
Sbjct: 397 TALENSLVVADEKYRFMQKLRNYVTNICDFLQHKACYIEELEEQMKKLHQDRASAIFERR 456

Query: 460 AADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEF 519
           A +NDDEM EVE A+KAA  V+  +GN+   + AA  AAQ A AA V++Q +LPVKLDEF
Sbjct: 457 ATNNDDEMVEVEEAVKAAMSVLIKKGNN---MEAAKIAAQEAFAA-VRKQRDLPVKLDEF 512

Query: 520 GRDMNLQKRRDMERRAESRQHRRT-RFDLKQLSSMDADISSQKLEGESTTDESDSETEAY 578
           GRD+NL+KR +M+ RAE+ Q +R+  F   +++SM+ D    K+EGES+TDESDSE++AY
Sbjct: 513 GRDLNLEKRMNMKVRAEACQRKRSLAFGYNKVTSMEWD--DHKIEGESSTDESDSESQAY 570

Query: 579 QSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYV 638
           QS  + +L+ A+ IFSDA+EEY QLS+VK R E+WKR+YSS+Y+DAYMSLS P I SPYV
Sbjct: 571 QSQSDLVLQAADEIFSDASEEYGQLSLVKSRMEEWKREYSSTYKDAYMSLSLPLIFSPYV 630

Query: 639 RLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANL--VPTLVEKVALPI 696
           RLELL+WDPLH+  DF EMKW+ LLF YGLP+DG+DF HDD DA+L  VP LVEKVALPI
Sbjct: 631 RLELLRWDPLHKGVDFQEMKWYKLLFTYGLPEDGKDFVHDDGDADLELVPNLVEKVALPI 690

Query: 697 LHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPT 756
           LH++I++CWDMLS +ET NA++AT L++ +V   SEAL  LLV+I T LA+AVAN+ VPT
Sbjct: 691 LHYEISHCWDMLSQQETVNAIAATKLIVQHVSHESEALAGLLVSIRTRLADAVANLTVPT 750

Query: 757 WSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVR 816
           WS   ++AVP+AAR+AAYRFGVSVRL+RNI  WK+VF++ +LEK+ALDELLC KVLPH+R
Sbjct: 751 WSLPVLAAVPDAARVAAYRFGVSVRLLRNIGSWKDVFSMAVLEKVALDELLCGKVLPHLR 810

Query: 817 SIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVT 876
            I+ NV DAI+RTERI+ASLSGVW+GPSV G    KLQPLV ++LSL + LE++++P   
Sbjct: 811 VISENVQDAITRTERIIASLSGVWSGPSVIGDKNRKLQPLVTYVLSLGRILERRNVP--- 867

Query: 877 ESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           ES+T+ LARRLKK+LV+LNEYD+AR +ARTFHLKEAL
Sbjct: 868 ESDTSHLARRLKKILVDLNEYDHARSMARTFHLKEAL 904

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544183|ref|XP_002513154.1| gc-rich sequence DNA-binding factor, putative [Ricinus communis] gi|223548165|gb|EEF49657.1| gc-rich sequence DNA-binding factor, putative [Ricinus communis]

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/926 (58%), Positives = 673/926 (72%), Gaps = 57/926 (6%)

Query: 2   SSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKKLLSFADDEEEKSEIPTS 61
           +SS++RNFRRR D++EDN  +   S  T  +     SSSKPKKLLSFADDEEE  E P  
Sbjct: 3   TSSKSRNFRRRGDENEDNESN---SNTTNPSYSSRKSSSKPKKLLSFADDEEEDEETP-- 57

Query: 62  NRDRTRPS-SRLSKPSSSHKITASKERQSSSATSSSTSLLSN----VQAQAGTYTEEYLL 116
                RPS  + SK  SSHK+TA K+R SSS+T+S+TS  +N    +  QAGTYT+E LL
Sbjct: 58  -----RPSKQKPSKTKSSHKLTAPKDRLSSSSTTSTTSTNTNSNNVLLPQAGTYTKEALL 112

Query: 117 ELRKNTKTL------KAPSSKPPAEPVVVLRGSIKPE-DSNLTRVQQKPSRDSSDSDSDH 169
           EL+K T+TL        P     +EP ++L+G +KP     L +    P +D    D D+
Sbjct: 113 ELQKKTRTLAKPSSKPPPPPPSSSEPKIILKGLLKPTLPQTLNQQDADPPQDEIIIDEDY 172

Query: 170 KAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSSLR 229
                                +I DE  IK IRAK++RLRQS A APDYI LDGG+++  
Sbjct: 173 --------------------SLIPDEDTIKKIRAKRERLRQSRATAPDYISLDGGAAT-- 210

Query: 230 GDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVAR--VENDYEYVD 287
             ++  SDEEPEF  R+AM G++  +      VF+D D   D   V+A   V ND +  +
Sbjct: 211 --SDAFSDEEPEFRNRIAMIGKKDNTTPTTHAVFQDFDNGNDSH-VIAEETVVNDED--E 265

Query: 288 EDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGA 347
           ED +WEEEQ RK LGKR+DD S    +   +              + +  +P+IGGA G 
Sbjct: 266 EDKIWEEEQFRKALGKRMDDPSSSTPSLFPTPSTSTITTTNNHRHSHI--VPTIGGAFGP 323

Query: 348 SQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLS 407
           + GLD +S+ Q++  A KAL  N+ RLKESH RT+SSL K DE+LS+SL+ IT LE SLS
Sbjct: 324 TPGLDALSVPQQSHIARKALLDNLTRLKESHNRTVSSLTKADENLSASLMNITALEKSLS 383

Query: 408 AAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEM 467
           AAGEKFIFMQKLRD+VSVIC+FLQ KAPYIE LE +MQ L+++RASAILERR ADNDDEM
Sbjct: 384 AAGEKFIFMQKLRDFVSVICEFLQHKAPYIEELEEQMQTLHEQRASAILERRTADNDDEM 443

Query: 468 TEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQK 527
            EV+ A++AA  V   RG++ + + AA +AAQ A+A+ +KEQ NLPVKLDEFGRD+N QK
Sbjct: 444 MEVKTALEAAKKVFSARGSNEAAITAAMNAAQDASAS-MKEQINLPVKLDEFGRDINQQK 502

Query: 528 RRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDESDSETEAYQSNREELLK 587
           R DM+RRAE+RQ R+ +   K+LSS++ D S+QK+EGES+TDESDSE+ AYQSNR+ LL+
Sbjct: 503 RLDMKRRAEARQRRKAQ---KKLSSVEVDGSNQKVEGESSTDESDSESAAYQSNRDLLLQ 559

Query: 588 TAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDP 647
           TA+ IF DA+EEY QLSVVK+RFE WK++YS+SYRDAYMS+S PAI SPYVRLELLKWDP
Sbjct: 560 TADQIFGDASEEYCQLSVVKQRFENWKKEYSTSYRDAYMSISAPAIFSPYVRLELLKWDP 619

Query: 648 LHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDM 707
           LHEDA F  MKWH+LL +YGLP+DG D + +DADANLVP LVEKVA+PILHH+IA+CWDM
Sbjct: 620 LHEDAGFFHMKWHSLLSDYGLPQDGSDLSPEDADANLVPELVEKVAIPILHHEIAHCWDM 679

Query: 708 LSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPN 767
           LSTRETKNAV AT LV  YVP SSEAL +LL+AI T L +AV +I VPTWS + + AVP 
Sbjct: 680 LSTRETKNAVFATNLVTDYVPASSEALAELLLAIRTRLTDAVVSIMVPTWSPIELKAVPR 739

Query: 768 AARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAIS 827
           AA+IAAYRFG+SVRLM+NICLWK++ +LP+LEKLALD+LLCRKVLPH++S+ASNVHDA++
Sbjct: 740 AAQIAAYRFGMSVRLMKNICLWKDILSLPVLEKLALDDLLCRKVLPHLQSVASNVHDAVT 799

Query: 828 RTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESETAGLARRL 887
           RTERI+ASLSGVWAG SVT S  HKLQPLVD ++SL K L+ KH  G +E E +GLARRL
Sbjct: 800 RTERIIASLSGVWAGTSVTASRSHKLQPLVDCVMSLGKRLKDKHPLGASEIEVSGLARRL 859

Query: 888 KKMLVELNEYDNARDIARTFHLKEAL 913
           KKMLVELN+YD AR+IAR F L+EAL
Sbjct: 860 KKMLVELNDYDKAREIARMFSLREAL 885

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481093|ref|XP_003610832.1| GC-rich sequence DNA-binding factor-like protein [Medicago truncatula] gi|355512167|gb|AES93790.1| GC-rich sequence DNA-binding factor-like protein [Medicago truncatula]

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/944 (56%), Positives = 681/944 (72%), Gaps = 83/944 (8%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKKLLSFADDE-EEKSEIP 59
           MSS+++RNFRRR D    N+DD+TP+  T  +    P   KP KLLSFADDE +  +E P
Sbjct: 1   MSSAKSRNFRRRTDT---NSDDDTPT--TVPSKPSAPKPKKPPKLLSFADDEIDADNETP 55

Query: 60  TSNRDRT-RPSSRLSKPSSS--HKITASKERQSSSATSSSTSLLSNVQAQAGTYTEEYLL 116
              R R+ +P     KPSSS  HKIT  K R +S + S S S   NVQ QAGTYT E L 
Sbjct: 56  ---RPRSSKPHHHRPKPSSSSSHKITTHKNRITSHSPSPSPS---NVQPQAGTYTLEALR 109

Query: 117 ELRKNTKTLKAPSS---------KPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDS 167
           EL+KNT+TL  P++         KP +EPV+VL+G +KP       V  +P     +SDS
Sbjct: 110 ELQKNTRTLVTPTTASRPISSEPKPSSEPVIVLKGLLKP-------VTSEP-----ESDS 157

Query: 168 DHKAETEKRFASLGV--GKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGS 225
           +   E E +FAS+G+  GK +   G    E +IKA +AK++R+R++GA APDYI LDGGS
Sbjct: 158 EENGEFEAKFASVGIKNGKDSFFPG----EEDIKAAKAKRERMRKAGAAAPDYISLDGGS 213

Query: 226 SSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEY 285
           +   G AEG SDEEPE+  R+AMFG +   G+KK  VFE      DER       +D   
Sbjct: 214 N--HGAAEGLSDEEPEYRGRIAMFGGKKGDGEKKG-VFEV----ADER------FDDVVV 260

Query: 286 VDEDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQF---SYSTTVTPIP--- 339
            +ED +WEEEQ +KGLGKR D+GS RVG      V    QQ  F   S +     +P   
Sbjct: 261 DEEDGLWEEEQFKKGLGKRRDEGSARVGGGGEVPVVQAAQQPNFVGPSVANVYGAVPNVV 320

Query: 340 -------SIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDL 392
                  SIGGAI A+  LD +SI+Q+AE A KA+  N+ RLKESH RTMSSL KTDE+L
Sbjct: 321 AAASANTSIGGAIPATPVLDVISISQQAEIAKKAMLDNIRRLKESHGRTMSSLNKTDENL 380

Query: 393 SSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERA 452
           S+SLLKITDLESSL  A EK+ FMQKLR+Y+S ICDFLQ KA YIE LE +M+KL+++RA
Sbjct: 381 SASLLKITDLESSLVVADEKYRFMQKLRNYISNICDFLQHKAYYIEELEDQMKKLHEDRA 440

Query: 453 SAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNL 512
           SAI E+RA +NDDEM EVEAA+KAA LV+  +G++     AA SAAQ A AA V++Q + 
Sbjct: 441 SAIFEKRATNNDDEMVEVEAAVKAAMLVLSRKGDNVE---AARSAAQDAFAA-VRKQRDF 496

Query: 513 PVKLDEFGRDMNLQKRRDMERRAESRQHRRTR-FDLKQLSSMDADISSQKLEGESTTDES 571
           PV+LDEFGRD+NL+KR+ M+  AE+RQ RR++ FD K+ +SM+ D    K+EGES+TDES
Sbjct: 497 PVQLDEFGRDLNLEKRKQMKVMAEARQRRRSKAFDSKKSASMEID--DHKVEGESSTDES 554

Query: 572 DSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTP 631
           DSE++AYQS R+ +L+ A+ IFSDA+EEYSQLS+VK R E+WKR+YSSSY +AY+SLS P
Sbjct: 555 DSESQAYQSQRDLVLQAADEIFSDASEEYSQLSLVKTRMEEWKREYSSSYNEAYISLSLP 614

Query: 632 AIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANL--VPTLV 689
            I SPYVRLELL+WDPLH+  DF +MKW+ LLF YGLP+DG+DF HDD DA+L  VP LV
Sbjct: 615 LIFSPYVRLELLRWDPLHKGLDFQDMKWYKLLFTYGLPEDGKDFVHDDGDADLELVPNLV 674

Query: 690 EKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAV 749
           EKVALPILH+++++CWDMLS +ET NA++AT L++ +V   SEAL  LLV+I T LA+AV
Sbjct: 675 EKVALPILHYEVSHCWDMLSQQETMNAIAATKLIVQHVSRESEALAGLLVSIRTRLADAV 734

Query: 750 ANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCR 809
           AN+ VPTWS L ++AVP+AA+IAAYRFGVSVRL+RNICLWK++FA+ +LEKLALDELL  
Sbjct: 735 ANLTVPTWSPLVLAAVPDAAKIAAYRFGVSVRLLRNICLWKDIFAMSVLEKLALDELLYA 794

Query: 810 KVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEK 869
           KVLPH RSI+ NV DAI+RTERI+ SLSGVWAGPSVTG    KLQPLV ++LSL + LE+
Sbjct: 795 KVLPHFRSISENVQDAITRTERIIDSLSGVWAGPSVTGDKSRKLQPLVAYVLSLGRILER 854

Query: 870 KHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           +++P   ES+   LARRLKK+LV+LNEYD+AR +ARTFHLKEAL
Sbjct: 855 RNVP---ESD---LARRLKKILVDLNEYDHARTMARTFHLKEAL 892

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519824|ref|XP_003528569.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/946 (55%), Positives = 683/946 (72%), Gaps = 66/946 (6%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKK-------LLSFADDEE 53
           MS++++RNFRRR  D E N+ ++  +  TT  +K  P+SS   K       LLSFAD++E
Sbjct: 1   MSTAKSRNFRRRGGDTESNDGNDGGTTTTTFPSK--PTSSAKPKKKPQAPKLLSFADEDE 58

Query: 54  EKSEIPTSNRDR-TRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTE 112
           +  E P     +  R ++   KPSSSHKIT  K+R    A SSS S+ SNVQ QAGTYT+
Sbjct: 59  QTDENPRPRASKPYRSAATAKKPSSSHKITTLKDR---IAHSSSPSVPSNVQPQAGTYTK 115

Query: 113 EYLLELRKNTKTLKAPSS-----KPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDS 167
           E L EL+KNT+TL   SS     KP +EPV+VL+G +KP  S       +P    S S+ 
Sbjct: 116 EALRELQKNTRTLVTSSSSRSDPKPSSEPVIVLKGLVKPLGS-------EPQGRDSYSEG 168

Query: 168 DHKAETEKRFASLGVGKIAVQSGVIY-DEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSS 226
           +H+ E E + A++G+     + G  Y D+  I+AIRAK++RLRQ+   APDYI LDGGS+
Sbjct: 169 EHR-EVEAKLATVGIQN---KEGSFYPDDETIRAIRAKRERLRQARPAAPDYISLDGGSN 224

Query: 227 SLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYV 286
              G AEG SDEEPEF  R+AMFGE+   GKK  GVFE+     +ER +  R +   + V
Sbjct: 225 --HGAAEGLSDEEPEFRGRIAMFGEKVDGGKK--GVFEE----VEERIMDVRFKGGEDEV 276

Query: 287 DEDVMWEEE------QVRKGLGKRIDDGSVRV------GANTSSSVAMPQQQQQFSY--S 332
            +D   +EE      Q RKGLGKR+D+GS RV      G+ +  +  +P   + +    S
Sbjct: 277 VDDDDDDEEKMWEEEQFRKGLGKRMDEGSARVDVSVMQGSQSPHNFVVPSAAKVYGAVPS 336

Query: 333 TTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDL 392
              +  PSIGG I +   LD + I+Q+AE+A KAL  NV RLKESH RTMSSL KTDE+L
Sbjct: 337 AAASVSPSIGGVIESLPALDVVPISQQAEAARKALLENVRRLKESHGRTMSSLSKTDENL 396

Query: 393 SSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERA 452
           S+SLL IT LE+SL  A EK+ FMQKLR+YV+ ICDFLQ KA YIE LE +M+KL+++RA
Sbjct: 397 SASLLNITALENSLVVADEKYRFMQKLRNYVTNICDFLQHKAFYIEELEEQMKKLHEDRA 456

Query: 453 SAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNL 512
            AI ERRA +NDDEM EVE A+KAA  V+  +GN+   + AA  AAQ A +A V++Q +L
Sbjct: 457 LAISERRATNNDDEMIEVEEAVKAAMSVLSKKGNN---MEAAKIAAQEAFSA-VRKQRDL 512

Query: 513 PVKLDEFGRDMNLQKRRDME--RRAESRQHRRTR-FDLKQLSSMDADISSQKLEGESTTD 569
           PVKLDEFGRD+NL+KR +M+   R+E+ Q +R++ FD  +++SM+ D    K+EGES+TD
Sbjct: 513 PVKLDEFGRDLNLEKRMNMKAKTRSEACQRKRSQAFDSNKVTSMELD--DHKIEGESSTD 570

Query: 570 ESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLS 629
           ESDSE++AYQS  + +L+ A+ IFSDA+EEY QLS+VK R E+WKR++SSSY+DAYMSLS
Sbjct: 571 ESDSESQAYQSQSDLVLQAADEIFSDASEEYGQLSLVKSRMEEWKREHSSSYKDAYMSLS 630

Query: 630 TPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANL--VPT 687
            P I SPYVRLELL+WDPLH   DF EMKW+ LLF YGLP+DG+DF HDD DA+L  VP 
Sbjct: 631 LPLIFSPYVRLELLRWDPLHNGVDFQEMKWYKLLFTYGLPEDGKDFVHDDGDADLELVPN 690

Query: 688 LVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAE 747
           LVEKVALPILH++I++CWDM+S +ET NA++AT L++ +V   SEAL DLLV+I T LA+
Sbjct: 691 LVEKVALPILHYEISHCWDMVSQQETVNAIAATKLMVQHVSHESEALADLLVSIQTRLAD 750

Query: 748 AVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELL 807
           AVA++ VPTWS   ++AVP+AAR+AAYRFGVSVRL+RNICLWK+VF++P+LEK+ALDELL
Sbjct: 751 AVADLTVPTWSPSVLAAVPDAARVAAYRFGVSVRLLRNICLWKDVFSMPVLEKVALDELL 810

Query: 808 CRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTL 867
           CRKVLPH+R I+ NV DAI+RTERI+ASLSG+WAGPSV G    KLQPLV ++LSL + L
Sbjct: 811 CRKVLPHLRVISENVQDAITRTERIIASLSGIWAGPSVIGDKNRKLQPLVTYVLSLGRIL 870

Query: 868 EKKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           E++++P   E++T+ LARRLKK+L +LNEYD+AR++ARTFHLKEAL
Sbjct: 871 ERRNVP---ENDTSHLARRLKKILADLNEYDHARNMARTFHLKEAL 913

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523352|ref|XP_003530304.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/943 (56%), Positives = 668/943 (70%), Gaps = 77/943 (8%)

Query: 1   MSSSRARNFRRRADDDEDNNDDNTPSAATTTATKKPPSSSKPKK-----LLSFADDEEEK 55
           MS++++RNFRRR  D E N DD   S   TT   KPPSS+KPKK     LLSFADDEE  
Sbjct: 1   MSAAKSRNFRRRGGDTEANEDDGDTS---TTFRSKPPSSAKPKKPQAPKLLSFADDEEIS 57

Query: 56  SEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQAGTYTEEYL 115
           +  P S+    RPS    KPSSSHKIT  K+R      + S+S+ SNVQ QAGTYT+E L
Sbjct: 58  NPRPRSSAKPQRPS----KPSSSHKITTLKDR-----IAHSSSVSSNVQPQAGTYTKEAL 108

Query: 116 LELRKNTKTLKAPSSKPPA-----EPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDSDHK 170
            EL+KNT+TL + S+         EPV+VL+G +KP       V  +P    SDS+ +HK
Sbjct: 109 RELQKNTRTLVSSSTTTTTSSSRSEPVIVLKGLVKP-------VVSEPQGRHSDSEGEHK 161

Query: 171 AETEKRFASLGVGKIAVQSG---VIYDEAEIKAIRAKKDRLRQSGAKAPDYIPLDGGSSS 227
            E E + +SLG+     Q+G      DE  IKAIRAK++RLR++   APDYI LDGGS+ 
Sbjct: 162 -EVEGKLSSLGI-----QNGKDSFFPDEETIKAIRAKRERLRKARPAAPDYISLDGGSN- 214

Query: 228 LRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEYVD 287
             G AEG SDEEPEF  R+AMF E+   G KK  VFE+  V+E  R      ++  E   
Sbjct: 215 -HGAAEGLSDEEPEFRGRIAMFEEKGEGGGKKG-VFEE--VEERLRDEEENDDDYEEEKM 270

Query: 288 EDVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYSTTVTPI--------- 338
                EEEQ RKGLGKR+D+G+ RV       V    QQ +F  S+              
Sbjct: 271 W----EEEQFRKGLGKRMDEGAARVDV----PVVQGAQQNKFVVSSAAAVYGGVPSADAR 322

Query: 339 -----PSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLS 393
                PSIGGA  +   LD + ++Q+AE A KAL  NV RLKESH RTMSSL KTDE+LS
Sbjct: 323 VPSVSPSIGGATESMPALDVVPMSQQAERARKALVENVRRLKESHERTMSSLSKTDENLS 382

Query: 394 SSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERAS 453
           +S LKIT LE+SL  A EK+ FMQKLR+YVS +CDFLQ KA YIE LE +M+KL+++RAS
Sbjct: 383 ASFLKITALENSLVVADEKYRFMQKLRNYVSNMCDFLQHKAFYIEELEEQMKKLHEDRAS 442

Query: 454 AILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLP 513
           AI ERR  +NDDEM EVEAA+KA   V+  +GN+   + AA SAAQ A AA V++Q +LP
Sbjct: 443 AIFERRTTNNDDEMIEVEAAVKAVMSVLNKKGNN---MEAAKSAAQEAFAA-VRKQKDLP 498

Query: 514 VKLDEFGRDMNLQKRRDMERRAESRQHRRTR-FDLKQLSSMDADISSQKLEGESTTDESD 572
           VKLDEFGRD+NL+KR  M+ RAE+ Q +R++ F+  +L+SM+ D    K+EGES+TDESD
Sbjct: 499 VKLDEFGRDLNLEKRMQMKVRAEAHQRKRSQAFNSNKLASMELD--DPKIEGESSTDESD 556

Query: 573 SETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPA 632
           SE++AYQS R+ +L+ A+ IFSDA+EEY QLS VK R E+WKR+YSSSY+DAYMSLS P 
Sbjct: 557 SESQAYQSQRDLVLQAADGIFSDASEEYGQLSFVKRRMEEWKREYSSSYKDAYMSLSLPL 616

Query: 633 IMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANL--VPTLVE 690
           + SPYVRLELL+WDPLH+  DF EMKW+ LLF YGLP+DG+DF HDD DA+L  VP LVE
Sbjct: 617 VFSPYVRLELLRWDPLHKGLDFQEMKWYKLLFTYGLPEDGKDFVHDDGDADLELVPNLVE 676

Query: 691 KVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVA 750
           KVALPILH++I++CWDMLS +ET NA++AT L++ +V   SEAL DLLV+I T LA+AVA
Sbjct: 677 KVALPILHYEISHCWDMLSQQETVNAIAATKLIVQHVSHESEALADLLVSIRTRLADAVA 736

Query: 751 NIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRK 810
           N+ VPTWS   ++AV +AAR+AAYRFGVSVRL+RNIC WK+VF++P+LE LALDELL  K
Sbjct: 737 NLTVPTWSPPVVAAVADAARVAAYRFGVSVRLLRNICSWKDVFSMPVLENLALDELLFGK 796

Query: 811 VLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKK 870
           VLPH+R I+ NV DAI+RTERI+ASLSGVWAGPSV      KLQPL+ ++LSL + LE++
Sbjct: 797 VLPHLRIISENVQDAITRTERIIASLSGVWAGPSVIADRKRKLQPLLTYVLSLGRILERR 856

Query: 871 HLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           + P   ES+T+ LARRLKK+LV+LNEYD+AR +ARTFHLKEAL
Sbjct: 857 NAP---ESDTSHLARRLKKILVDLNEYDHARTMARTFHLKEAL 896

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242310|ref|NP_196472.1| GC-rich sequence DNA-binding factor [Arabidopsis thaliana] gi|9759349|dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] gi|117413996|dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gi|332003936|gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis thaliana]

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/943 (53%), Positives = 661/943 (70%), Gaps = 65/943 (6%)

Query: 1   MSSSRARNFRRRADDDEDNNDDN--TPSA--ATTTATKKPP--SSSKPKK-LLSFADDEE 53
           M S+R +NFRRR DD  D  D    TPS+   +T ++ KP   S+S PKK LLSFADDEE
Sbjct: 1   MGSNRPKNFRRRGDDGGDEIDGKVATPSSKPTSTLSSSKPKTLSASAPKKKLLSFADDEE 60

Query: 54  EKSE-------IPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQ 106
           E+ +        P + RDR + SSRL    SSH+ +++KER+ +S         SNV  Q
Sbjct: 61  EEEDGAPRVTIKPKNGRDRVKSSSRLGVSGSSHRHSSTKERRPAS---------SNVLPQ 111

Query: 107 AGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSD 166
           AG+Y++E LLEL+KNT+TL    S   AEP VVL+G IKP   +  +  +   +  SD D
Sbjct: 112 AGSYSKEALLELQKNTRTLPYSRSSANAEPKVVLKGLIKPPQDHEQQSLKDVVKQVSDLD 171

Query: 167 SDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQS-GAKAPDYIPLDGGS 225
            D + E E+   +              D+A I  IRAKK+R+RQS  A APDYI LDGG 
Sbjct: 172 FDEEGEEEQHEDAFA------------DQAAI--IRAKKERMRQSRSAPAPDYISLDGGI 217

Query: 226 SSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDYEY 285
            +     EG SDE+ +F     +F         KKGVF+  D    E P          Y
Sbjct: 218 VN-HSAVEGVSDEDADFQ---GIFVGPRPQKDDKKGVFDFGD----ENPTAKETTTSSIY 269

Query: 286 VDED---VMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQ----------QFSYS 332
            DED    +WEEEQ +KG+GKR+D+GS R    TS+ + +P   +           ++Y 
Sbjct: 270 EDEDEEDKLWEEEQFKKGIGKRMDEGSHRT--VTSNGIGVPLHSKQQTLPQQQPQMYAYH 327

Query: 333 TTVTPIP--SIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDE 390
              TP+P  S+   IG +  +DT+ ++Q+AE A KAL+ NV +LKESHA+T+SSL KTDE
Sbjct: 328 AG-TPMPNVSVAPTIGPATSVDTLPMSQQAELAKKALKDNVKKLKESHAKTLSSLTKTDE 386

Query: 391 DLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKE 450
           +L++SL+ IT LESSLSAAG+K++FMQKLRD++SVICDF+Q+K   IE +E +M++LN++
Sbjct: 387 NLTASLMSITALESSLSAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEK 446

Query: 451 RASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQT 510
            A +ILERR ADN+DEM E+ AA+KAA  V+   G+S+S +IAA++ A  AA+ ++++Q 
Sbjct: 447 HALSILERRIADNNDEMIELGAAVKAAMTVLNKHGSSSS-VIAAATGAALAASTSIRQQM 505

Query: 511 NLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDE 570
           N PVKLDEFGRD NLQKRR++E+RA +RQ RR RF+ K+ S+M+ D  S K+EGES+TDE
Sbjct: 506 NQPVKLDEFGRDENLQKRREVEQRAAARQKRRARFENKRASAMEVDGPSLKIEGESSTDE 565

Query: 571 SDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLST 630
           SD+ET AY+  R+ LL+ A+ +FSDA+EEYSQLS VK RFE+WKRDYSS+YRDAYMSL+ 
Sbjct: 566 SDTETSAYKETRDSLLQCADKVFSDASEEYSQLSKVKARFERWKRDYSSTYRDAYMSLTV 625

Query: 631 PAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVE 690
           P+I SPYVRLELLKWDPLH+D DF +MKWH LLF+YG P+DG+DFA DD DANLVP LVE
Sbjct: 626 PSIFSPYVRLELLKWDPLHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDTDANLVPELVE 685

Query: 691 KVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVA 750
           KVA+PILHH I  CWD+LSTRET+NAV+AT LV  YV  SSEAL +L  AI   L EA+A
Sbjct: 686 KVAIPILHHQIVRCWDILSTRETRNAVAATSLVTNYVSASSEALAELFAAIRARLVEAIA 745

Query: 751 NIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRK 810
            I+VPTW  L + AVPN  ++AAYRFG SVRLMRNIC+WK++ ALP+LE LAL +LL  K
Sbjct: 746 AISVPTWDPLVLKAVPNTPQVAAYRFGTSVRLMRNICMWKDILALPVLENLALSDLLFGK 805

Query: 811 VLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKK 870
           VLPHVRSIASN+HDA++RTERIVASLSGVW GPSVT +    LQPLVD  L+L + LEK+
Sbjct: 806 VLPHVRSIASNIHDAVTRTERIVASLSGVWTGPSVTRTHSRPLQPLVDCTLTLRRILEKR 865

Query: 871 HLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
              G+ ++ET GLARRLK++LVEL+E+D+AR+I RTF+LKEA+
Sbjct: 866 LGSGLDDAETTGLARRLKRILVELHEHDHAREIVRTFNLKEAV 908

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810973|ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidopsis lyrata subsp. lyrata] gi|297319207|gb|EFH49629.1| increased level of polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/945 (54%), Positives = 666/945 (70%), Gaps = 69/945 (7%)

Query: 1   MSSSRARNFRRRADDDEDNNDDN--TPSA--ATTTATKKPP--SSSKPKK-LLSFADDEE 53
           M S+R RNFRRR DD  D  D    TP+A   +T +  KP   S+S PKK LLSFADDEE
Sbjct: 1   MGSNRPRNFRRRGDDGGDEIDGKVATPAAKPTSTLSLSKPKTLSASAPKKKLLSFADDEE 60

Query: 54  EKSE-------IPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLSNVQAQ 106
           E+ +        P + RDR + S RL    SSH+ +++KE + +S         SNV  Q
Sbjct: 61  EEEDGAPRVTIKPKNGRDRVKSSFRLGVSGSSHRHSSTKEHRPAS---------SNVLPQ 111

Query: 107 AGTYTEEYLLELRKNTKTLKAPSSKPPA--EPVVVLRGSIKPEDSNLTRVQQKPSRDSSD 164
           AG+Y++E LLEL+KNT+TL  P S+P +  EP VVL+G IKP   +  +  +   +  SD
Sbjct: 112 AGSYSKEALLELQKNTRTL--PYSRPSSNSEPKVVLKGLIKPPHQHEQQSLKDVVKQVSD 169

Query: 165 SDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQS-GAKAPDYIPLDG 223
            D D + E E+                  D+A I  IRAKK+R+RQS  A APDYI LDG
Sbjct: 170 LDFDEEGEKEQ------------PEDAFADQAAI--IRAKKERMRQSRSAPAPDYISLDG 215

Query: 224 GSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPVVARVENDY 283
           G+++     EG SDE+ +F  +    G R   G KK GVF+  D    E P         
Sbjct: 216 GTAN-HSAVEGVSDEDADF--QGIFVGARPHKGDKK-GVFDFGD----ENPTAKETTTSS 267

Query: 284 EYVDEDVMWEEE---QVRKGLGKRIDDGSVRVGANTSSSVAMP----------QQQQQFS 330
            Y DED   +     Q +KG+GKR+D+GS R  + TS+ + +P          QQ Q ++
Sbjct: 268 FYEDEDEEEKLWEEEQFKKGIGKRMDEGSHR--SVTSNGIGVPLHSNQQSLPHQQPQMYT 325

Query: 331 YSTTVTPIPSIGGA--IGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKT 388
           Y    TP+P+I  A  IG +  +DT+ ++Q+A  A KALQ NV +LKESHA+T+SSL KT
Sbjct: 326 YHAG-TPMPNISVAPTIGPATSVDTLPMSQQAALAKKALQDNVKKLKESHAKTLSSLTKT 384

Query: 389 DEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLN 448
           DE+L++SL+ IT LESSLSAAG+K++FMQKLRD++SVICDF+Q+K   IE +E +M++LN
Sbjct: 385 DENLTASLMSITALESSLSAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELN 444

Query: 449 KERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKE 508
           ++ A +ILERR ADN+DEM E+ AA+KAA  V+  +G+S S +IAA+++A  AA+A++++
Sbjct: 445 EKHALSILERRIADNNDEMIELGAAVKAAMTVLNKQGSSTS-VIAAATSAALAASASIRQ 503

Query: 509 QTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTT 568
           Q N PVKLDEFGRD NLQKRR++E+RA +RQ RR RF+ K+ S+M+ + SS K+EGES+T
Sbjct: 504 QMNQPVKLDEFGRDENLQKRREVEQRAAARQKRRARFENKRASAMEIEGSSLKIEGESST 563

Query: 569 DESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSL 628
           DESD+ET AY+  R+ LL+ A+ +FSDA+EEYSQLS VK RFE+WKRDYSS+YRDAYMSL
Sbjct: 564 DESDTETSAYKETRDSLLQCADKVFSDASEEYSQLSRVKARFERWKRDYSSTYRDAYMSL 623

Query: 629 STPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTL 688
           + P+I SPYVRLELLKWDPLH+D DF +MKWH LLF+YG P+DG+DFA DD DANLVP L
Sbjct: 624 TVPSIFSPYVRLELLKWDPLHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDTDANLVPEL 683

Query: 689 VEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEA 748
           VEKVA+PILHH I  CWD+LSTRET+NAV+AT LV  YV  SSEAL +L  AI   L EA
Sbjct: 684 VEKVAIPILHHQIVRCWDILSTRETRNAVAATSLVTNYVSASSEALAELFAAIRARLVEA 743

Query: 749 VANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLC 808
           +A I+VPTW  L + AVPNA ++AAYRFG SVRLMRNIC+WK++ AL +LE LAL +LL 
Sbjct: 744 IAAISVPTWDPLVLKAVPNAPQVAAYRFGTSVRLMRNICMWKDILALSVLENLALSDLLF 803

Query: 809 RKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLE 868
            KVLPHVRSIASN+HDA++RTERIVASLSGVW GPSVT +    LQPLVD  L+L + LE
Sbjct: 804 GKVLPHVRSIASNIHDAVTRTERIVASLSGVWTGPSVTRTHSRPLQPLVDCTLTLRRILE 863

Query: 869 KKHLPGVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
           K+   G+ ++ET GLARRLK++LVEL+E+D+AR+I RTF+LKEA+
Sbjct: 864 KRLASGLDDAETTGLARRLKRILVELHEHDHAREIVRTFNLKEAV 908

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	913
TAIR|locus:2159552	908	ILP1 "increased level of polyp	0.926	0.931	0.511	3.1e-218
TAIR|locus:2184697	603	AT5G09210 [Arabidopsis thalian	0.318	0.482	0.581	5e-89
UNIPROTKB|E1BXP7	909	GCFC1 "Uncharacterized protein	0.424	0.426	0.267	1.9e-52
ZFIN|ZDB-GENE-070112-2352	897	zgc:158234 "zgc:158234" [Danio	0.420	0.428	0.280	7.9e-51
RGD|1584739	918	Paxbp1 "PAX3 and PAX7 binding	0.420	0.418	0.274	2.2e-49
MGI|MGI:1914617	917	Paxbp1 "PAX3 and PAX7 binding	0.428	0.426	0.275	2.6e-48
UNIPROTKB|E2RET3	921	GCFC1 "Uncharacterized protein	0.420	0.416	0.270	3e-48
UNIPROTKB|Q9Y5B6	917	GCFC1 "GC-rich sequence DNA-bi	0.420	0.418	0.270	3.6e-48
UNIPROTKB|F1SH07	916	GCFC1 "Uncharacterized protein	0.420	0.419	0.270	3.7e-48
UNIPROTKB|F1MBJ4	922	GCFC1 "Uncharacterized protein	0.420	0.416	0.267	6.6e-48

TAIR|locus:2159552 ILP1 "increased level of polyploidy1-1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 2108 (747.1 bits), Expect = 3.1e-218, P = 3.1e-218
 Identities = 450/880 (51%), Positives = 581/880 (66%)

Query:    45 LLSFADDEEEKSEIPTSNRDRTXXXXXXXXXXXXHKITASKERQXXXXXXXXXXXXXNVQ 104
             LLSFADDEEE+ +       +               ++ S  R              NV 
Sbjct:    52 LLSFADDEEEEEDGAPRVTIKPKNGRDRVKSSSRLGVSGSSHRHSSTKERRPASS--NVL 109

Query:   105 AQAGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRXXXX 164
              QAG+Y++E LLEL+KNT+TL    S   AEP VVL+G IKP   +  +  +   +    
Sbjct:   110 PQAGSYSKEALLELQKNTRTLPYSRSSANAEPKVVLKGLIKPPQDHEQQSLKDVVKQVSD 169

Query:   165 XXXXHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQS-GAKAPDYIPLDG 223
                  + E E+                  D+A I  IRAKK+R+RQS  A APDYI LDG
Sbjct:   170 LDFDEEGEEEQH------------EDAFADQAAI--IRAKKERMRQSRSAPAPDYISLDG 215

Query:   224 GSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGXXXXXXXXXXXXXXXXXXXNDY 283
             G  +     EG SDE+ +F  +    G R     KK                      D 
Sbjct:   216 GIVN-HSAVEGVSDEDADF--QGIFVGPRPQKDDKKGVFDFGDENPTAKETTTSSIYEDE 272

Query:   284 EYVDEDVMWEEEQVRKGLGKRIDDGSVR-VGANT------SSSVAMPQQQ-QQFSYSTTV 335
             +  +ED +WEEEQ +KG+GKR+D+GS R V +N       S    +PQQQ Q ++Y    
Sbjct:   273 D--EEDKLWEEEQFKKGIGKRMDEGSHRTVTSNGIGVPLHSKQQTLPQQQPQMYAYHAG- 329

Query:   336 TPIPSIGGA--IGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLS 393
             TP+P++  A  IG +  +DT+ ++Q+AE A KAL+ NV +LKESHA+T+SSL KTDE+L+
Sbjct:   330 TPMPNVSVAPTIGPATSVDTLPMSQQAELAKKALKDNVKKLKESHAKTLSSLTKTDENLT 389

Query:   394 SSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERAS 453
             +SL+ IT LESSLSAAG+K++FMQKLRD++SVICDF+Q+K   IE +E +M++LN++ A 
Sbjct:   390 ASLMSITALESSLSAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEKHAL 449

Query:   454 AILERRAADNDDEMTEVEAAIKAATLVIGDRGNXXXXXXXXXXXXXXXXXXXVKEQTNLP 513
             +ILERR ADN+DEM E+ AA+KAA  V+   G+                   +++Q N P
Sbjct:   450 SILERRIADNNDEMIELGAAVKAAMTVLNKHGSSSSVIAAATGAALAASTS-IRQQMNQP 508

Query:   514 VKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXX 573
             VKLDEFGRD NLQKRR++E+RA +RQ RR RF+ K+ S+M+ D  S K+EG         
Sbjct:   509 VKLDEFGRDENLQKRREVEQRAAARQKRRARFENKRASAMEVDGPSLKIEGESSTDESDT 568

Query:   574 XXXAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAI 633
                AY+  R+ LL+ A+ +FSDA+EEYSQLS VK RFE+WKRDYSS+YRDAYMSL+ P+I
Sbjct:   569 ETSAYKETRDSLLQCADKVFSDASEEYSQLSKVKARFERWKRDYSSTYRDAYMSLTVPSI 628

Query:   634 MSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
              SPYVRLELLKWDPLH+D DF +MKWH LLF+YG P+DG+DFA DD DANLVP LVEKVA
Sbjct:   629 FSPYVRLELLKWDPLHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDTDANLVPELVEKVA 688

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIA 753
             +PILHH I  CWD+LSTRET+NAV+AT LV  YV  SSEAL +L  AI   L EA+A I+
Sbjct:   689 IPILHHQIVRCWDILSTRETRNAVAATSLVTNYVSASSEALAELFAAIRARLVEAIAAIS 748

Query:   754 VPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLP 813
             VPTW  L + AVPN  ++AAYRFG SVRLMRNIC+WK++ ALP+LE LAL +LL  KVLP
Sbjct:   749 VPTWDPLVLKAVPNTPQVAAYRFGTSVRLMRNICMWKDILALPVLENLALSDLLFGKVLP 808

Query:   814 HVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLP 873
             HVRSIASN+HDA++RTERIVASLSGVW GPSVT +    LQPLVD  L+L + LEK+   
Sbjct:   809 HVRSIASNIHDAVTRTERIVASLSGVWTGPSVTRTHSRPLQPLVDCTLTLRRILEKRLGS 868

Query:   874 GVTESETAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
             G+ ++ET GLARRLK++LVEL+E+D+AR+I RTF+LKEA+
Sbjct:   869 GLDDAETTGLARRLKRILVELHEHDHAREIVRTFNLKEAV 908

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0030371 "translation repressor activity" evidence=IDA

GO:0042023 "DNA endoreduplication" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2184697 AT5G09210 [Arabidopsis thaliana (taxid:3702)]

 Score = 848 (303.6 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
 Identities = 172/296 (58%), Positives = 214/296 (72%)

Query:   577 AYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSP 636
             AY+  R+ LL+ A+ IFSDA+  YS+LS VK  F++  R  S ++R AY SL+ P++ SP
Sbjct:   277 AYEEARDSLLQRADKIFSDASVVYSELSRVKSIFKRGARHPSPAFRAAYTSLTVPSMYSP 336

Query:   637 YVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPI 696
             Y+RLELL+WDPLH+D DFS+M WH LLF+  +            + N V  LV+ VA+PI
Sbjct:   337 YLRLELLRWDPLHQDVDFSDMNWHGLLFHSRIVCGSTPVC---TNPNFVSELVKYVAVPI 393

Query:   697 LHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPT 756
             LHH I  CWD+LSTRET+N V+AT LV  YV  SSEAL +L +AIH  L EA+  I+VPT
Sbjct:   394 LHHRIVRCWDILSTRETRNVVAATSLVARYVFPSSEALAELSLAIHARLVEAIIAISVPT 453

Query:   757 WSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVR 816
             W       VPNA ++AAYRFG SVRLMRNIC+WK+V  LP+LEKLAL +LL  KVLPHVR
Sbjct:   454 WDPQVSKDVPNAPQVAAYRFGTSVRLMRNICMWKDVMELPVLEKLALSDLLFGKVLPHVR 513

Query:   817 SIAS--NVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKK 870
             SIAS  N+HDA+++TERIVASLSGVW GPSVT +  H LQPLVD  L+L + LEKK
Sbjct:   514 SIASESNIHDAVTKTERIVASLSGVWTGPSVTRTHSHLLQPLVDCTLTLGRILEKK 569

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1BXP7 GCFC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 386 (140.9 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
 Identities = 109/407 (26%), Positives = 191/407 (46%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L + + ++RR   R+ RR R   +Q       ++   LEG           
Sbjct:   503 LDSFGRDRVLYQEQ-VKRRTAEREARRAR--RRQAREQTGKMADH-LEGLSSDDEETSTD 558

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   R+ +LK +  +F D  E +  +  +K +FE W+  Y +SY+DAY+ L  P + 
Sbjct:   559 ITNFNMERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLF 618

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DDAD +L+PT+VE+V 
Sbjct:   619 NPLIRLQLLVWTPLEGKCRDFETMLWFESLLFYGCEEQEQE--KDDADISLLPTIVERVV 676

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATI-LVMAY---VPTSSEALKDLLVAIHTCLAEAV 749
             LP L       WD  ST +T   V+    LV  Y   V   ++  + LL A+   +   +
Sbjct:   677 LPKLTVISENIWDPFSTTQTSRMVAIVQKLVNGYPSVVNAENKNTQMLLKALLLRMRRTL 736

Query:   750 AN-IAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALDELL 807
              + + +P +    +    +   +   R F  SV+L+ N   W  + +   L++L++D LL
Sbjct:   737 DDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGILSNKTLQELSIDGLL 796

Query:   808 CRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTL 867
              R +L   ++ +    D+I + + ++A     W           +L+    +++ LA T+
Sbjct:   797 NRYILMAFQN-SEYGDDSIKKAQSVIACFPKQWFANLKGDKTISQLENFCRYLVHLADTI 855

Query:   868 EKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
              +  + G ++ E      ++K   K+L  +   D+A  +A   ++KE
Sbjct:   856 YRNSI-GCSDVEKRNAREQIKQIIKLLASIRALDHAVTVANDHNVKE 901

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

ZFIN|ZDB-GENE-070112-2352 zgc:158234 "zgc:158234" [Danio rerio (taxid:7955)]

 Score = 396 (144.5 bits), Expect = 7.9e-51, Sum P(3) = 7.9e-51
 Identities = 116/414 (28%), Positives = 195/414 (47%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD         +RR   R+ RRTR   ++ +    D  ++  EG           
Sbjct:   488 LDSFGRDRTAYLELAKQRRIAEREARRTR---RRQAREQNDKRAEHKEGLSSDDEETSTD 544

Query:   576 -XAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
               ++ S RE +LK ++ +F D  E++  L  +K  FE W++ Y S YRDAY+ L  P + 
Sbjct:   545 ITSFDSERERILKESKKVFEDVVEDFHSLDNIKSHFETWRKLYYSCYRDAYIGLCLPKLF 604

Query:   635 SPYVRLELLKWDPLH-EDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+L+ W PL  E ++F  M W   L  YG  +       +D D NL+P +VE+V 
Sbjct:   605 NPLIRLQLISWSPLEVECSNFEYMLWFESLLFYGCGEQSALKKEEDVDNNLLPAIVERVL 664

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPT--------SSEALKDLLVAIHTCL 745
             LP L       WD LS  +T   V+    ++   PT        + E L+ +++ I   L
Sbjct:   665 LPKLAVLTDQIWDPLSNSQTYRLVAFMKRLVKDYPTVLHGENRNTQELLRTVIMRIRRTL 724

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   +I +P +    M    + A + + R F   V+ + NI +W  + +L +L+ LA+D
Sbjct:   725 DD---DIFLPLFPKNVMENKNSGAYLFSQRQFWSCVKFLGNILMWDGILSLSVLKDLAID 781

Query:   805 ELLCRKVLPHVRSI-ASNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDF---M 860
               L R +L  +++  AS  H  + +  R+V      W   S+ G     L PL +F   +
Sbjct:   782 STLNRYILSALQTTDASEEH--VEKCRRVVECFPVQWFS-SLKGQ--QTLPPLENFCRFL 836

Query:   861 LSLAKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
               L+ +L +  + G ++ E   +   +K   ++L  LN  D+   +A    +K+
Sbjct:   837 KHLSSSLYRSCVAG-SDVEKRNVREHIKEVIRLLGRLNALDHVITVASEHGIKD 889

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

RGD|1584739 Paxbp1 "PAX3 and PAX7 binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 385 (140.6 bits), Expect = 2.2e-49, Sum P(3) = 2.2e-49
 Identities = 113/411 (27%), Positives = 190/411 (46%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG           
Sbjct:   512 LDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGQMADH-LEGLSSDDEETSTD 567

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   R+ +LK +  +F D  E +  +  +K +FE W+  Y  SY+DAY+ L  P + 
Sbjct:   568 ITNFNLERDRILKESSKVFEDVLESFCSIDCIKAQFEAWRSKYYMSYKDAYIGLCLPKLF 627

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV 
Sbjct:   628 NPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVI 685

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCL 745
             LP L       WD  ST +T   V  T+ ++   P+   A        LK LL+ +   L
Sbjct:   686 LPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTL 745

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   L++L++D
Sbjct:   746 DD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSID 802

Query:   805 ELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPLVDFMLSL 863
              LL R +L   ++ +    D+I + + ++      W   ++ G     +L+    +++ L
Sbjct:   803 GLLNRYILMAFQN-SEYGDDSIRKAQNVINCFPKQWF-VNLKGERTISQLENFCRYLVHL 860

Query:   864 AKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
             A T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   861 ADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHAVSVASDHNVKE 910

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0008134 "transcription factor binding" evidence=ISO

GO:0014842 "regulation of satellite cell proliferation" evidence=ISO

GO:0031062 "positive regulation of histone methylation" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:2000288 "positive regulation of myoblast proliferation" evidence=ISO

MGI|MGI:1914617 Paxbp1 "PAX3 and PAX7 binding protein 1" [Mus musculus (taxid:10090)]

 Score = 382 (139.5 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
 Identities = 115/418 (27%), Positives = 193/418 (46%)

Query:   509 QTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXX 568
             Q  +   LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG    
Sbjct:   504 QALMAPNLDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGQMADH-LEGLSSD 559

Query:   569 XXXXXXXXA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMS 627
                       +   ++ +LK +  +F D  E +  +  +K +FE W+  Y  SY+DAY+ 
Sbjct:   560 DEETSTDITNFNLEKDRILKESSKVFEDVLESFYSIDCIKAQFEAWRSKYYMSYKDAYIG 619

Query:   628 LSTPAIMSPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVP 686
             L  P + +P +RL+LL W PL     DF  M W   L  YG  +D E    D+AD  L+P
Sbjct:   620 LCLPKLFNPLIRLQLLTWTPLEAKCRDFETMLWFESLLFYGC-EDREQ-EKDEADVALLP 677

Query:   687 TLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLL 738
             T+VEKV LP L       WD  ST +T   V  T+ ++   P+   A        LK LL
Sbjct:   678 TIVEKVILPKLTVIAETMWDPFSTTQTSRMVGITMKLINGYPSVVNADNKNTQVYLKALL 737

Query:   739 VAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPI 797
             + +   L +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   
Sbjct:   738 LRMRRTLDD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKT 794

Query:   798 LEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPL 856
             L++L++D LL R +L   ++ +    D+I + + ++      W   ++ G     +L+  
Sbjct:   795 LQELSIDGLLNRYILMAFQN-SEYGDDSIRKAQNVINCFPKQWF-VNLKGERTISQLENF 852

Query:   857 VDFMLSLAKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
               +++ LA T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   853 CRYLVHLADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHAISVASDHNVKE 909

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IPI

GO:0014842 "regulation of satellite cell proliferation" evidence=IMP

GO:0031062 "positive regulation of histone methylation" evidence=IGI;IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:2000288 "positive regulation of myoblast proliferation" evidence=IMP

UNIPROTKB|E2RET3 GCFC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 377 (137.8 bits), Expect = 3.0e-48, Sum P(3) = 3.0e-48
 Identities = 111/411 (27%), Positives = 189/411 (45%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG           
Sbjct:   515 LDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGKMADH-LEGLSSDDEETSTD 570

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   ++ + K +  +F D  E +  +  +K +FE W+  Y  SY+DAY+ L  P + 
Sbjct:   571 ITNFNLEKDRISKESSKVFEDVLESFYSIDCIKSQFEAWRSKYYLSYKDAYIGLCLPKLF 630

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV 
Sbjct:   631 NPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVI 688

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCL 745
             LP L       WD  ST +T   V  T+ ++   P+   A        LK LL+ +   L
Sbjct:   689 LPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTL 748

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   L++L++D
Sbjct:   749 DD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSID 805

Query:   805 ELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPLVDFMLSL 863
              LL R +L   ++ +    D+I + + ++      W   ++ G     +L+    +++ L
Sbjct:   806 GLLNRYILMAFQN-SEYGDDSIKKAQNVINCFPKQWF-MNLKGERTISQLENFCRYLVHL 863

Query:   864 AKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
             A T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   864 ADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHAMSVASDHNVKE 913

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q9Y5B6 GCFC1 "GC-rich sequence DNA-binding factor 1" [Homo sapiens (taxid:9606)]

 Score = 378 (138.1 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
 Identities = 111/411 (27%), Positives = 190/411 (46%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG           
Sbjct:   511 LDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGKMADH-LEGLSSDDEETSTD 566

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   ++ + K +  +F D  E +  +  +K +FE W+  Y +SY+DAY+ L  P + 
Sbjct:   567 ITNFNLEKDRISKESGKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKDAYIGLCLPKLF 626

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV 
Sbjct:   627 NPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVI 684

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCL 745
             LP L       WD  ST +T   V  T+ ++   P+   A        LK LL+ +   L
Sbjct:   685 LPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTL 744

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   L++L++D
Sbjct:   745 DD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSID 801

Query:   805 ELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPLVDFMLSL 863
              LL R +L   ++ +    D+I + + ++      W   ++ G     +L+    +++ L
Sbjct:   802 GLLNRYILMAFQN-SEYGDDSIKKAQNVINCFPKQWF-MNLKGERTISQLENFCRYLVHL 859

Query:   864 AKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
             A T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   860 ADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHAMSVASDHNVKE 909

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=NAS

GO:0005829 "cytosol" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

UNIPROTKB|F1SH07 GCFC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 377 (137.8 bits), Expect = 3.7e-48, Sum P(3) = 3.7e-48
 Identities = 111/411 (27%), Positives = 189/411 (45%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG           
Sbjct:   510 LDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGKMADH-LEGLSSDDEETSTD 565

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   ++ + K +  +F D  E +  +  +K +FE W+  Y  SY+DAY+ L  P + 
Sbjct:   566 ITNFNLEKDRISKESSKVFEDVLESFYSIDCIKSQFEAWRSKYYMSYKDAYIGLCLPKLF 625

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV 
Sbjct:   626 NPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVI 683

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCL 745
             LP L       WD  ST +T   V  T+ ++   P+   A        LK LL+ +   L
Sbjct:   684 LPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTL 743

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   L++L++D
Sbjct:   744 DD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSID 800

Query:   805 ELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPLVDFMLSL 863
              LL R +L   ++ +    D+I + + ++      W   ++ G     +L+    +++ L
Sbjct:   801 GLLNRYILMAFQN-SEYGDDSIKKAQNVINCFPKQWF-MNLKGERTISQLENFCRYLVHL 858

Query:   864 AKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
             A T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   859 ADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHALSVASDHNVKE 908

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1MBJ4 GCFC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 375 (137.1 bits), Expect = 6.6e-48, Sum P(3) = 6.6e-48
 Identities = 110/411 (26%), Positives = 190/411 (46%)

Query:   516 LDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGXXXXXXXXXXX 575
             LD FGRD  L +     R AE R+ RRTR   +Q       ++   LEG           
Sbjct:   516 LDSFGRDRALYQEHAKRRIAE-REARRTR--RRQAREQTGKMADH-LEGLSSDDEETSTD 571

Query:   576 XA-YQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIM 634
                +   ++ + K +  +F D  E +  +  +K +FE W+  Y +SY+ AY+ L  P ++
Sbjct:   572 ITNFNLEKDRISKESSKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKHAYIGLCLPKLL 631

Query:   635 SPYVRLELLKWDPLHEDA-DFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVA 693
             +P +RL+LL W PL     DF  M W   L  YG  +  ++   DD D  L+PT+VEKV 
Sbjct:   632 NPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQE--KDDVDVALLPTIVEKVI 689

Query:   694 LPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA--------LKDLLVAIHTCL 745
             LP L       WD  ST +T   V  T+ ++   P+   A        LK LL+ +   L
Sbjct:   690 LPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTL 749

Query:   746 AEAVANIAVPTWSSLAMSAVPNAARIAAYR-FGVSVRLMRNICLWKEVFALPILEKLALD 804
              +   ++ +P +    +    +   +   R F  SV+L+ N   W  +F+   L++L++D
Sbjct:   750 DD---DVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSID 806

Query:   805 ELLCRKVLPHVRSIASNVHDAISRTERIVASLSGVWAGPSVTGS-CCHKLQPLVDFMLSL 863
              LL R +L   ++ +    D+I + + ++      W   ++ G     +L+    +++ L
Sbjct:   807 GLLNRYILMAFQN-SEYGDDSIKKAQNVINCFPKQWF-VNLKGERTISQLENFCRYLVHL 864

Query:   864 AKTLEKKHLPGVTESETAGLARRLK---KMLVELNEYDNARDIARTFHLKE 911
             A T+ +  + G ++ E       +K   K+L  +   D+A  +A   ++KE
Sbjct:   865 ADTIYRNSI-GCSDVEKRNARENIKQIVKLLASVRALDHAMSVASDHNVKE 914

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	913
pfam07842	275	pfam07842, GCFC, GC-rich sequence DNA-binding fact	1e-32

>gnl|CDD|219603 pfam07842, GCFC, GC-rich sequence DNA-binding factor-like protein

 Score =  127 bits (321), Expect = 1e-32
 Identities = 66/270 (24%), Positives = 101/270 (37%), Gaps = 67/270 (24%)

Query: 603 LSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHED----------- 651
           L  V E FE  +R Y   Y++AY+SL  PA+++P +RLELL+WDPL +            
Sbjct: 1   LDEVAEIFEDLQRKYPEEYKEAYLSLLAPALVAPLLRLELLEWDPLEDPTYGVDILKRWK 60

Query: 652 -----------------ADFSEMKWHNLLFNYGLPKDGEDFAHD-DADANLVPT------ 687
                              +  M W   L  Y           D D   NL+        
Sbjct: 61  ALLELDSSDDTGGAESMDPYETMLWEGWLPRYRSSALSTWDPRDPDPMLNLLEAWAPLLP 120

Query: 688 ------LVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEA-LKDLLVA 740
                 ++E++ LP L   +   WD LS   T++ V     V  ++P   EA L+ L  A
Sbjct: 121 SFILDNILEQLVLPKLTAAVEE-WDPLSDTVTRHLVPIHSWVFPWLPLLGEARLEPLYPA 179

Query: 741 IHTCLAEAVANIAV-----------------PTWSSLAMSA-VPNAARIAAYRFGV---- 778
           I   L +A+                        W  L +   +P  AR     F +    
Sbjct: 180 IRRKLRQALDAWHPSDSALAGLKPWKDVFSPAEWDPLLLRHILPKLAR-FLQEFEINPRQ 238

Query: 779 -SVRLMRNICLWKEVFALPILEKLALDELL 807
            ++ L+RN+  WK + +  +L +L   E  
Sbjct: 239 QALDLLRNVLKWKGLLSPSVLAELLEKEFF 268

Sequences found in this family are similar to a region of a human GC-rich sequence DNA-binding factor homolog. This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein. This family also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein is also a member of this family. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	913
KOG2136	434	consensus Transcriptional regulators binding to th	100.0
PF07842	276	GCFC: GC-rich sequence DNA-binding factor-like pro	99.95
PF15458	254	NTR2: Nineteen complex-related protein 2	99.89
KOG2136	434	consensus Transcriptional regulators binding to th	99.31

>KOG2136 consensus Transcriptional regulators binding to the GC-rich sequences [Transcription]

Probab=100.00  E-value=3.2e-34  Score=320.21  Aligned_cols=142  Identities=46%  Similarity=0.785  Sum_probs=126.5

Q ss_pred             cCCCCCCCC-CchhHHHHHHHHHHHHHHhhhhhchhhhhccChHHHHHHHHHHHhhChhHHHHHHhhcchhhhhhhHHHH
Q 002517          562 LEGESTTDE-SDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRL  640 (913)
Q Consensus       562 ~EG~sSDDE-~~~e~~~f~~~~~~il~~a~~VF~DV~edf~~i~~Il~rFe~WR~~~p~sY~dAyisLcLPkl~~P~VRl  640 (913)
                      .||.++||+ .++++.+|++.++.+++.+.+||.||.++||.+.+|+.+|..|+.+||.+|.+||++||.|++++||||+
T Consensus       292 ~Eg~ssdd~~~~~e~~~~se~~d~~iqka~nif~~~~~~~~~l~nv~~k~~~~~~~~~~s~~~ay~~l~yp~~~ap~ir~  371 (434)
T KOG2136|consen  292 IEGDSSDDEEPDTETEAYSEWRDEVIQKAINIFSDASDEYSALSNVYLKFTRWRMKYPSSYRDAYSSLCYPKLLAPYIRL  371 (434)
T ss_pred             hcccccccccchHHHHhhhhhhhHHHHHHhhcchhhhhhhhHHHHHHHHHHHhccCCCchHHHHHHhhhhhhhcccceee
Confidence            799999997 5889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcccCCCCCCCCCCCChhHHHHHhcCCCCCCCCCCCCCCCcCchHHHHHHHhHhhHHHHhhhhcccCCHHHHHHHHHHH
Q 002517          641 ELLKWDPLHEDADFSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSAT  720 (913)
Q Consensus       641 ELl~WnPL~~~~dle~m~Wf~~L~~yg~~~~~~~~~~dd~D~~llp~vIEKvVlPkLt~~v~~~WDPlSt~QT~~Lv~l~  720 (913)
                      |             .+|+||..++.|+...-+........|.++|    .|+.||++++.|++||||+||+||++|+..|
T Consensus       372 ~-------------nsm~w~~~~~~~~~~~i~~i~k~l~s~~~~~----~~~~ipr~~d~~~~~wd~lstretr~li~g~  434 (434)
T KOG2136|consen  372 Q-------------NSMPWFGLLFEFGPSSIKQIKKPLKSDANSV----KKLAIPRLHDHVKELWDRLSTRETRSLIEGC  434 (434)
T ss_pred             c-------------ccCCcchHHHHcCccccchhcchhhccchhh----hhcccchHHHHHHHhccccchhhhhhHhcCC
Confidence            9             7999999999999653222112233344444    9999999999999999999999999999765

>PF07842 GCFC: GC-rich sequence DNA-binding factor-like protein; InterPro: IPR022783 Sequences in this group are similar to a region of a human GC-rich sequence DNA-binding factor homologue (Q9Y5B6 from SWISSPROT)

Probab=99.95  E-value=1.1e-28  Score=267.06  Aligned_cols=206  Identities=30%  Similarity=0.576  Sum_probs=182.8

Q ss_pred             hHHHHHHHHHHHhhChhHHHHHHhhcchhhhhhhHHHHHhcccCCCCCC-----------------------------CC
Q 002517          603 LSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHED-----------------------------AD  653 (913)
Q Consensus       603 i~~Il~rFe~WR~~~p~sY~dAyisLcLPkl~~P~VRlELl~WnPL~~~-----------------------------~d  653 (913)
                      ++.|+.+|++||.+||++|+++|++.|+|++++|++|.+|+.||||.+.                             +.
T Consensus         1 l~~i~~~fe~l~~~~~~ey~~~~l~~~~~~~~~P~lr~~l~~W~PL~~p~~~~~~l~~~~~lL~~~~~~~~~~~~~~~~~   80 (276)
T PF07842_consen    1 LEPILSRFEELKEKFPEEYRDAYLSLLAPALIAPLLRLELQNWDPLEDPSYGVDELKRWRSLLENDQDSSSSSSNRNMTP   80 (276)
T ss_pred             ChHHHHHHHHHHHHCHHHHHHcChHHHHHHHHHHHHHHHHhccCCccCcchHHHHHHHHHHHHhhcccccccccccccCc
Confidence            4679999999999999999999999999999999999999999999865                             47


Q ss_pred             CCCChhHHHHHhcCCCC-CCCCCCCCCCCcCchH------------HHHHHHhHhhHHHHhhhhcccCCHHHHHHHHHHH
Q 002517          654 FSEMKWHNLLFNYGLPK-DGEDFAHDDADANLVP------------TLVEKVALPILHHDIAYCWDMLSTRETKNAVSAT  720 (913)
Q Consensus       654 le~m~Wf~~L~~yg~~~-~~~~~~~dd~D~~llp------------~vIEKvVlPkLt~~v~~~WDPlSt~QT~~Lv~l~  720 (913)
                      +++|.|+.-+..|++.. .+-+..+.|++.++|+            ++|||+|+|||++.|+. |||+|.+||++++.++
T Consensus        81 ye~l~w~~~lp~~~~~~~~~w~~~~~~~~~~ll~~W~~~Lp~~~~~~ileqlVlPKL~~~V~~-WdP~s~~~t~~~~~~h  159 (276)
T PF07842_consen   81 YESLIWEIWLPKVRSAIANEWDPRDPDPDLSLLEAWSPLLPPWILDNILEQLVLPKLQAAVEE-WDPLSDSQTRNLVPLH  159 (276)
T ss_pred             HHHhhHHHHHHHHHHhhhcccCCCCCchHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh-CcccCcccccccchHH
Confidence            99999999999988432 2222235677889999            99999999999999998 9999999999999999


Q ss_pred             HHHHhhcCCCc-HHHHHHHHHHHHHHHHHhhh----------------cccc-CCchhhhh-hcchHHHHHH------HH
Q 002517          721 ILVMAYVPTSS-EALKDLLVAIHTCLAEAVAN----------------IAVP-TWSSLAMS-AVPNAARIAA------YR  775 (913)
Q Consensus       721 ~~v~~~~~~~s-k~~q~Ll~ai~~Rlk~aVed----------------vfIP-l~pk~v~~-~~p~~s~f~~------rq  775 (913)
                      .-|+.++|... ..++.|+..|+.||+.++++                ||+| .|++.+.+ -.|....+..      ++
T Consensus       160 ~wl~pwlp~l~~~~l~~l~~~ir~kl~~~l~~W~~~~~~~~~l~~Wk~vf~~~~~~~~~~~~i~Pkl~~~l~~~~i~p~~  239 (276)
T PF07842_consen  160 SWLFPWLPLLGSERLEPLYPAIRRKLRSALDNWHPSRSALAMLSPWKDVFIPEEWDKLLLRHILPKLAKFLREFVINPRQ  239 (276)
T ss_pred             HHHhccCcccCchhHHHHHHHHHHHHHHHHHccCcccchhhhhhHHHHhCCHhhHHHHHHHhhchHHHHHHHhCCCChhh
Confidence            99999998765 88899999999999999988                9999 99988763 4566666766      34


Q ss_pred             HhHHHHHHhhhhccccccchHHHHHhhHhHHHhhhh
Q 002517          776 FGVSVRLMRNICLWKEVFALPILEKLALDELLCRKV  811 (913)
Q Consensus       776 FwsavKLL~Nil~W~~~l~~~~L~~L~l~~LLnr~l  811 (913)
                        .++++|+||+.|.++++.++|..|..+++++|++
T Consensus       240 --q~l~~~~~vl~W~~~l~~~~l~~ll~~~ffpkwl  273 (276)
T PF07842_consen  240 --QDLKPLRNVLAWKDLLPPSVLVQLLEDEFFPKWL  273 (276)
T ss_pred             --cCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence              6799999999999999999999999999999976

This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein []. This entry also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein [] is also a member of this family. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF15458 NTR2: Nineteen complex-related protein 2

Probab=99.89  E-value=7.6e-23  Score=219.35  Aligned_cols=203  Identities=25%  Similarity=0.400  Sum_probs=125.9

Q ss_pred             CCCcHHHHHHHHhcCCCCCCCCCCCCCCceeeecCCCCCCCcchhhcccCCCCCCCCCCCc-hhhhhhhhccccCccc--
Q 002517          108 GTYTEEYLLELRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQQKPSRDSSDSDSD-HKAETEKRFASLGVGK--  184 (913)
Q Consensus       108 ~~Yt~e~L~eL~~~t~~~~~~~~~~~~ep~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--  184 (913)
                      |+|+++||.|||+|||+||+..+.....             ..                .. -+.+....|  |.++.  
T Consensus         1 p~Ys~eYl~eL~~sTp~tP~~~~~~~~~-------------~d----------------~~~~~ld~~~~~--g~~~~~~   49 (254)
T PF15458_consen    1 PTYSKEYLDELRSSTPSTPKNVSSSKSK-------------DD----------------EDEMNLDDMELF--GEVVVSS   49 (254)
T ss_pred             CCCcHHHHHHHHhcCCCCCccccccccc-------------cc----------------hhhcccchhhhc--cchhhhh
Confidence            7999999999999999998764211100             00                00 011223333  32221  


Q ss_pred             --ccccCCCCCCHHHHHHHHHHHHHH-HhcC--CCCCCcccCCCC-----------C-----CCCCCCCCCC--CCCCCC
Q 002517          185 --IAVQSGVIYDEAEIKAIRAKKDRL-RQSG--AKAPDYIPLDGG-----------S-----SSLRGDAEGS--SDEEPE  241 (913)
Q Consensus       185 --~~~~~~~IPdaa~I~aAr~kR~~l-R~~~--~~~~DyIpLd~~-----------~-----~~~r~~~~~~--~De~de  241 (913)
                        ....+..||++++|+++|+||+++ |+.+  ..+.+||||++.           .     ..+|+..+++  .+++||
T Consensus        50 ~~~~~~~~~IPt~a~I~e~K~rR~rla~e~~~~~~Ed~yIsL~d~~d~~~~~~~~~~~~~~~~~srLvredddl~eG~de  129 (254)
T PF15458_consen   50 DEPDSSSSSIPTEAEIREAKERRARLAREQGASSDEDEYISLDDNDDKDDLMEINGGPKKKKEESRLVREDDDLGEGFDE  129 (254)
T ss_pred             hccccccCCCCCHHHHHHHHHHHHHHHHhhcccCCCCcceeCCCCCCcchhhhcccccccCCcccccccccccccccchh
Confidence              135678999999999999999999 4432  123459999982           1     1234443333  344666


Q ss_pred             c--CCceeeccccccc---ccccccccccCccccccCcccccccCCccchhhhhhHHHHHHHhhcCCccCCCccccccCC
Q 002517          242 F--PRRVAMFGERTAS---GKKKKGVFEDDDVDEDERPVVARVENDYEYVDEDVMWEEEQVRKGLGKRIDDGSVRVGANT  316 (913)
Q Consensus       242 ~--~~RI~~~g~k~~~---~r~r~~~~e~i~~~~~e~~~~~~~~~~~~edEE~~~WE~eQiRKg~~~~~d~~~~~~~~~~  316 (913)
                      |  ++||++ |++..+   .|+|+.|.++|+.           .++++++|+..+||++|||||+.+..       ..  
T Consensus       130 f~ed~rlaL-g~ka~~~~~~~rR~~i~e~I~~-----------~~~d~~de~~~~wE~aQ~rkg~~~~~-------~~--  188 (254)
T PF15458_consen  130 FVEDGRLAL-GKKAEREQKRRRREEIEEAIND-----------DDDDSEDEERAEWEAAQLRKGMDGLS-------DE--  188 (254)
T ss_pred             hhccCCccc-CHHHHHHHHHHHHHHHHHHHHh-----------cccccchhhHHHHHHHHHHhhccCCc-------cc--
Confidence            5  799996 988643   3667888888861           12345679999999999999997642       00  


Q ss_pred             CCCCcccccccccCCCCCCCCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 002517          317 SSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKT  388 (913)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~v~qq~e~~kk~L~~~L~~L~e~h~~~~~el~k~  388 (913)
                          ...+++++++   ..+++|+++                   .+..+|...|..|+..|+.+...++..
T Consensus       189 ----~~~~~~~~ip---~~tpLP~L~-------------------~~~~rL~~~l~~le~~~~~~~~~l~~l  234 (254)
T PF15458_consen  189 ----KDRYKPPPIP---KITPLPSLS-------------------ECLERLRESLSSLEDSKSQLQQQLESL  234 (254)
T ss_pred             ----hhccCCCCCc---ccCCCCchh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                0011111111   223344443                   334788999999999887766555544

>KOG2136 consensus Transcriptional regulators binding to the GC-rich sequences [Transcription]

Probab=99.31  E-value=7.1e-13  Score=149.66  Aligned_cols=335  Identities=9%  Similarity=-0.091  Sum_probs=266.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhchhhhhccChHHHHHHHHHHHhhChhHHHHHHhhcchhhhhhhHHHHHhcccCCCCC-CCC
Q 002517          575 TEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLHE-DAD  653 (913)
Q Consensus       575 ~~~f~~~~~~il~~a~~VF~DV~edf~~i~~Il~rFe~WR~~~p~sY~dAyisLcLPkl~~P~VRlELl~WnPL~~-~~d  653 (913)
                      +..+.-......++..+.+.++...++.+-.+...+..|.-+|..+|.++++..|.+..+.+..|+.+..|.+|.+ +.+
T Consensus        62 ~~~~~l~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~s~~~~~~~~i~d~~~~~~~r~~~~~a~~~~~~~~~  141 (434)
T KOG2136|consen   62 IRSSALTKGSGSEAGGKFPKGAEPSNSLKLDKRPDESKEVPRASESYFQSEIEEIPDVFFVKLARYSKELARLLGDEYSD  141 (434)
T ss_pred             CCccccccccchhhcCCCccccccccccccccccchhcccchhhhhhcccccccCchHHHHHHHHHHHHHHhhhcchhhh
Confidence            3333334455567789999999999999999999999999999999999999999999999999999999999986 578


Q ss_pred             CCCChhHHHHHhcCCCCCCCCCCCCCCCcCchHHHHHHHhHhhHHHHhhhhcccCCHHHHHHHHHHHHHHHhhcC----C
Q 002517          654 FSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVP----T  729 (913)
Q Consensus       654 le~m~Wf~~L~~yg~~~~~~~~~~dd~D~~llp~vIEKvVlPkLt~~v~~~WDPlSt~QT~~Lv~l~~~v~~~~~----~  729 (913)
                      +.++.|+..++.+++..+..  .+.+.+..+.+......+.|+...--..-|++....|..--...-......++    +
T Consensus       142 d~~~~~~~s~~~~~~e~d~~--~~~~~~v~~~~~e~gv~~~~~~~~~~d~dse~e~w~~~~~~k~~~~r~~~~~~~~~~~  219 (434)
T KOG2136|consen  142 DEEKSKIITELNRSSEDDRP--SDKDGHVKLTNQEDGVLESEHGQDEDDEDSEDEEWEQKQIRKAVDAREILGLPRPVEI  219 (434)
T ss_pred             HHHHHHHHHHHhhhcccccc--cCCcchhhcccccceeeeccccchhhhhhhhhhHHHHHHHHHHHHHHHhcCCcccccc
Confidence            99999999999998864332  12333344445555577788877766667777777666544433332222232    3


Q ss_pred             CcHHHHHHHHHHHHHHHHHhh-hccccCCchhhhh-hcchHHHHHHHHHhHHHHHHhhhhccccccchHHHHHhhHhHHH
Q 002517          730 SSEALKDLLVAIHTCLAEAVA-NIAVPTWSSLAMS-AVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELL  807 (913)
Q Consensus       730 ~sk~~q~Ll~ai~~Rlk~aVe-dvfIPl~pk~v~~-~~p~~s~f~~rqFwsavKLL~Nil~W~~~l~~~~L~~L~l~~LL  807 (913)
                      .++..+.++..-+..|++..+ ..+++.|++.+.. ...+.+-|+.+.+|..+.|+.+...|.++-....+...|++.++
T Consensus       220 ~~~~~~~~~~~~~~~m~~l~df~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~~~r~~~~~~a~~~~~Eg~ssdd  299 (434)
T KOG2136|consen  220 ADKMFQSLARYKRQFMRELLDFTPHENEFMKGRLCRDFENMSGFFSRDKEARRILFEVEERSQRIRAAEELVIEGDSSDD  299 (434)
T ss_pred             cchhhHHHHHHHHHHHHHHhccchhhhhHhhccccccccchhhhhhhhHHHHHHHhhhhhhHhHHhhhhhhhhccccccc
Confidence            456677788888888888888 5677788876542 22223558889999999999999999999999999999999999


Q ss_pred             hhhhhhcccccCCCchhHHHHHHH-----------HHhcccccccCCCCCCccccccchHHHHHHHHHHHHHhhcCCCCC
Q 002517          808 CRKVLPHVRSIASNVHDAISRTER-----------IVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVT  876 (913)
Q Consensus       808 nr~lL~~L~~~~~~~~d~i~k~~~-----------Iva~lP~~Wf~~~~~~~~~~~L~~f~~~l~~l~~~l~~~~~~g~~  876 (913)
                      +++.+....+.- ...|.|.|+..           ++.|||.-||.+...+.+..++.+||.|.++++-.+..++-.++.
T Consensus       300 ~~~~~e~~~~se-~~d~~iqka~nif~~~~~~~~~l~nv~~k~~~~~~~~~~s~~~ay~~l~yp~~~ap~ir~~nsm~w~  378 (434)
T KOG2136|consen  300 EEPDTETEAYSE-WRDEVIQKAINIFSDASDEYSALSNVYLKFTRWRMKYPSSYRDAYSSLCYPKLLAPYIRLQNSMPWF  378 (434)
T ss_pred             ccchHHHHhhhh-hhhHHHHHHhhcchhhhhhhhHHHHHHHHHHHhccCCCchHHHHHHhhhhhhhcccceeecccCCcc
Confidence            999999998864 47888999998           999999999999999999999999999999999999886656777


Q ss_pred             chhhH---HHHHHHHHHHHh----------cCcchHHHHHHHHhccccc
Q 002517          877 ESETA---GLARRLKKMLVE----------LNEYDNARDIARTFHLKEA  912 (913)
Q Consensus       877 ~~~~~---~~~~~l~~~Lv~----------l~~~~~A~~~~~~~~l~~~  912 (913)
                      ....+   ..+..++++|+.          -+.+||+..+...+..++.
T Consensus       379 ~~~~~~~~~~i~~i~k~l~s~~~~~~~~~ipr~~d~~~~~wd~lstret  427 (434)
T KOG2136|consen  379 GLLFEFGPSSIKQIKKPLKSDANSVKKLAIPRLHDHVKELWDRLSTRET  427 (434)
T ss_pred             hHHHHcCccccchhcchhhccchhhhhcccchHHHHHHHhccccchhhh
Confidence            65543   678888899988          7889999998887776653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	913
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 3e-10
 Identities = 95/664 (14%), Positives = 186/664 (28%), Gaps = 237/664 (35%)

Query: 43  KKLLS-----FADDEEEKSEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSST 97
           K +LS     F D+ + K ++     D  +    LSK    H I  SK+  S       T
Sbjct: 19  KDILSVFEDAFVDNFDCK-DVQ----DMPKSI--LSKEEIDH-IIMSKDAVSG------T 64

Query: 98  SLLSNVQAQAGTYTEEYLLE--LRKNTKTLKAPSSKPPAEPVVVLRGSIKPEDSNLTRVQ 155
             L            +  +E  LR N K L +P      +P             ++    
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP-------------SMMTRM 111

Query: 156 QKPSRDSSDSDSDHKAETEKRFASLGVGKIAVQSGVIYDEAEIKAIRAKKDRLRQSGAKA 215
               RD   +D+         FA   V +                +R     LR +    
Sbjct: 112 YIEQRDRLYNDNQ-------VFAKYNVSR----------LQPYLKLRQALLELRPA---- 150

Query: 216 PDYIPLDGGSSSLRGDAEGSSDEEPEFPRRVAMFGERTASGKKKKGVFEDDDVDEDERPV 275
              + +DG                        + G    SGK                 V
Sbjct: 151 -KNVLIDG------------------------VLG----SGKT---------W------V 166

Query: 276 VARVENDYEYVDE---DVMWEEEQVRKGLGKRIDDGSVRVGANTSSSVAMPQQQQQFSYS 332
              V   Y+   +    + W                 + +  N +S   + +  Q+  Y 
Sbjct: 167 ALDVCLSYKVQCKMDFKIFW-----------------LNLK-NCNSPETVLEMLQKLLYQ 208

Query: 333 TTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDL 392
                             +D    ++        ++  ++ ++    R + S     +  
Sbjct: 209 ------------------IDPNWTSR--SDHSSNIKLRIHSIQAELRRLLKS-----KPY 243

Query: 393 SSSLLKITDLESSLSAAGEKFIFMQKL----RDYVSVICDFLQDKAPYIETLEAEMQKLN 448
            + LL + +++++ +     F    K+    R    V  DFL        +L+     L 
Sbjct: 244 ENCLLVLLNVQNAKAW--NAFNLSCKILLTTRF-KQVT-DFLSAATTTHISLDHHSMTLT 299

Query: 449 KERASAILERRAADNDDEMTEVEAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKE 508
            +   ++L  +  D   +    E  +      +         +IA S          +++
Sbjct: 300 PDEVKSLL-LKYLDCRPQDLPREV-LTTNPRRLS--------IIAES----------IRD 339

Query: 509 QTNLPVKLDEFGRDMNLQKRRDMERRA----ESRQHRRTRFDLKQLSSM--DADISSQKL 562
                   D + + +N  K   +   +    E  ++R+  F   +LS     A I +  L
Sbjct: 340 GLA---TWDNW-KHVNCDKLTTIIESSLNVLEPAEYRK-MF--DRLSVFPPSAHIPTILL 392

Query: 563 E---GESTTDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSS 619
                +    +                            +  + S+V    EK  ++ + 
Sbjct: 393 SLIWFDVIKSDVM----------------------VVVNKLHKYSLV----EKQPKESTI 426

Query: 620 SYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDADFSEMKWHNLLFNYGLPK--DGEDFAH 677
           S    Y+ L          +++L     LH           +++ +Y +PK  D +D   
Sbjct: 427 SIPSIYLEL----------KVKLENEYALHR----------SIVDHYNIPKTFDSDDLIP 466

Query: 678 DDAD 681
              D
Sbjct: 467 PYLD 470

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 6e-07
 Identities = 70/514 (13%), Positives = 130/514 (25%), Gaps = 202/514 (39%)

Query: 512 LPVKLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGESTTDES 571
           L V  D F  + + +  +DM +                LS  + D     +         
Sbjct: 22  LSVFEDAFVDNFDCKDVQDMPKSI--------------LSKEEID----HIIMSKDAVSG 63

Query: 572 ---------DSETEAYQSNREELLKTA-EHIFSDAAEEYSQLSVVKERFEKWKRDYSSSY 621
                      + E  Q   EE+L+   + + S    E  Q S++   +           
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI--------EQ 115

Query: 622 RDAYMSLSTPAIMSPY--VRLE--------LLKWDP-----LH----------------- 649
           RD     +   + + Y   RL+        LL+  P     +                  
Sbjct: 116 RDRLY--NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 650 ---EDADFSEMKW--------------------HNLLFNYGLPKDGED---FAHDDADAN 683
              +     ++ W                    + +  N+    D             A 
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 684 LVPTLVEKV---ALPILHHDIAYCWD-------------MLSTRETKNAVSATILVMAYV 727
           L   L  K     L +L  ++    +             +L+TR  +     +     ++
Sbjct: 234 LRRLLKSKPYENCLLVL-LNV---QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 728 P--------TSSEALKDLLVAIHT---CLAEAVANIAVPTWSSLAMSAVPNAARIAAYRF 776
                    T  E    LL  +      L   V     P      +S       IA    
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-P----RRLSI------IAE--- 335

Query: 777 GVSVRLMRN-ICLWKEVFALPILEKL---------ALDELLCRK------VLP-HVRSIA 819
                 +R+ +  W   +     +KL          L+    RK      V P     I 
Sbjct: 336 -----SIRDGLATWDN-WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-IP 388

Query: 820 SNVHDAISRTERIVASLSGVWAGPSVTGSCCHKLQPLVDFMLSLAKTLEKKHLPGVTESE 879
           + +             LS +W     +           D M+ + K L K  L       
Sbjct: 389 TIL-------------LSLIWFDVIKS-----------DVMVVVNK-LHKYSL------- 416

Query: 880 TAGLARRLKKMLVELNEYDNARDIARTFHLKEAL 913
              + ++ K+  + +       ++      + AL
Sbjct: 417 ---VEKQPKESTISI--PSIYLELKVKLENEYAL 445

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 3e-06
 Identities = 52/339 (15%), Positives = 92/339 (27%), Gaps = 119/339 (35%)

Query: 649 HEDADFSEMKWHN--LLFNYGLP--------KDGED-----FAHDDAD------------ 681
           H D +  E ++    +L  +           KD +D      + ++ D            
Sbjct: 6   HMDFETGEHQYQYKDILSVF-EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 682 -----------ANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVP-- 728
                        +V   VE+V    L  +  +    + T E +     T + +      
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEV----LRINYKFLMSPIKT-EQRQPSMMTRMYIEQRDRL 119

Query: 729 -TSSEALKDLLV-------AIHTCLAEA--VANIAV-------PTWSSLAMSAVPNAARI 771
              ++      V        +   L E     N+ +        TW  +A+    +    
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW--VALDVCLSYKVQ 177

Query: 772 AAYRFGVSVRLMRNICLW----KEVFALPILEKLALDELLCRKVLP-------HVRSIAS 820
               F +          W           +LE L   + L  ++ P       H  +I  
Sbjct: 178 CKMDFKI---------FWLNLKNCNSPETVLEML---QKLLYQIDPNWTSRSDHSSNIKL 225

Query: 821 NVHDAISRTERIVAS---------LSGVWAGPSV----TGSCCHKLQPLV--------DF 859
            +H   +   R++ S         L  V            SC    + L+        DF
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQN-AKAWNAFNLSC----KILLTTRFKQVTDF 280

Query: 860 MLSLAKTLE---KKHLPGVTESETAGL-ARRLKKMLVEL 894
            LS A T       H   +T  E   L  + L     +L
Sbjct: 281 -LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 4e-06
 Identities = 66/479 (13%), Positives = 140/479 (29%), Gaps = 142/479 (29%)

Query: 385 LKKTDEDLSSSLLKITDLESSLSAAGEKFI--FMQKLRDYVSVICDFL------QDKAP- 435
           +   D    +  L    L S      +KF+   ++   +Y      FL      + + P 
Sbjct: 55  IMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRI--NY-----KFLMSPIKTEQRQPS 106

Query: 436 -----YIETLE------AEMQKLNKERASAILE-RRAADNDDEMTEVEAAIKAATLVIGD 483
                YIE  +          K N  R    L+ R+A         V        L+ G 
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV--------LIDGV 158

Query: 484 RGNSASKLIAASSAAQAAAAAAVKEQTNLPVKLDEFGRDMNLQKRRDMERRAESRQHRRT 543
            G+  + +     A     +  V+ + +  +    F   +NL            +     
Sbjct: 159 LGSGKTWV-----ALDVCLSYKVQCKMDFKI----FW--LNL------------KNCNSP 195

Query: 544 RFDLKQLSSMDADISSQKLEGESTTDESDSETEAYQSNREELLKTAEH-----IFSDAAE 598
              L+ L  +   I          +        + Q+    LLK+  +     +  +   
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--- 252

Query: 599 EYSQLSVVKERFEKWKR-DYSS----SYRDAYMSLSTPAIMSPYVRLELLKWDPLHEDAD 653
                  V+   + W   + S     + R   ++    A  + ++ L+      L  D  
Sbjct: 253 -------VQNA-KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM-TLTPD-- 301

Query: 654 FSEMKWHNLLFNYGLPKDGEDFAHDDADANLVPTLVEKVALPILHHDIA---YCWDMLST 710
             E+K  +LL  Y L    +D   +    N  P  +  +A   +   +A     W  ++ 
Sbjct: 302 --EVK--SLLLKY-LDCRPQDLPREVLTTN--PRRLSIIAE-SIRDGLATWDN-WKHVNC 352

Query: 711 RETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAV--ANIAVPTWSSLAMSAVPNA 768
            +    + +++ V+          + +   +      +V   +  +PT   L++      
Sbjct: 353 DKLTTIIESSLNVL-----EPAEYRKMFDRL------SVFPPSAHIPT-ILLSL------ 394

Query: 769 ARIAAYRFGVSVRLMRNICLW---KEVFALPILEKLALDELLCRKVLPHVRSIASNVHD 824
                              +W    +   + ++ KL    L+ ++      SI      
Sbjct: 395 -------------------IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI----PS 430

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 2e-05
 Identities = 83/614 (13%), Positives = 166/614 (27%), Gaps = 203/614 (33%)

Query: 9   FRRRADDDEDNND--DNTPSAATTTATKK----PPSSSKPKKLL------------SFAD 50
           F     D+ D  D  D   S  +            + S   +L              F +
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84

Query: 51  DEEEK------SEIPTSNRDRTRPSSRLSKPSSSHKITASKERQSSSATSSSTSLLS--N 102
           +          S I T  R  +  +                  +      +   + +  N
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRMYI--------------EQRDRLYNDNQVFAKYN 130

Query: 103 VQAQAGTYTEEYLLELRKNTKTLKAPSSKPPAEPVVV---------------LR------ 141
           V         +  L+LR+    L+      PA+ V++                       
Sbjct: 131 V------SRLQPYLKLRQALLELR------PAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 142 -----------GSIKPEDSNLTRVQQ---------KPSRDSSDSDSDHKAETEKRFASLG 181
                       +    ++ L  +Q+             D S +        +     L 
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 182 VGKIAVQSGVI----YDEAEIKA--IRAK-----KDR--LRQSGAKAPDYIPLDGGSSSL 228
             K      ++     +     A  +  K     + +       A    +I LD  S +L
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 229 -RGDAEG--------SSDEEPE-----FPRRVAMFGERTASGKKKKGVFEDDDVDEDERP 274
              + +            + P       PRR+++  E    G      ++  + D+    
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 275 VVARVEN----DYE--YVD-----EDV---------MWEEEQVRKGLGKRIDDGSVRVGA 314
           + + +      +Y   +                   +W +         + D   V    
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV-------IKSDVMVVVNKL 411

Query: 315 NTSSSVAMPQQQQQFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAES--AM-KALQTNV 371
           +  S V   +Q ++ + S     IPSI            + +  K E+  A+ +++  + 
Sbjct: 412 HKYSLVE--KQPKESTIS-----IPSI-----------YLELKVKLENEYALHRSIVDHY 453

Query: 372 NRLKESHARTMSS--------------LKKTDEDLSSSLL------------KITDLESS 405
           N  K   +  +                LK  +     +L             KI    ++
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 406 LSAAGEKFIFMQKLRDYVSVICDFLQDKAP------YIETLEAEMQKLNKERASAILERR 459
            +A+G     +Q+L+ Y   ICD   D          ++ L    + L   + + +L R 
Sbjct: 514 WNASGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLL-RI 570

Query: 460 AADNDDEMTEVEAA 473
           A   +DE    EA 
Sbjct: 571 ALMAEDEAIFEEAH 584

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00