Citrus Sinensis ID: 003080
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 850 | ||||||
| 359483090 | 980 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.867 | 0.841 | 0.0 | |
| 255573801 | 985 | conserved hypothetical protein [Ricinus | 0.962 | 0.830 | 0.852 | 0.0 | |
| 224087367 | 949 | predicted protein [Populus trichocarpa] | 0.998 | 0.894 | 0.813 | 0.0 | |
| 449442649 | 957 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.886 | 0.794 | 0.0 | |
| 297793327 | 945 | hypothetical protein ARALYDRAFT_918999 [ | 1.0 | 0.899 | 0.777 | 0.0 | |
| 42568619 | 945 | uncharacterized protein [Arabidopsis tha | 1.0 | 0.899 | 0.779 | 0.0 | |
| 9759536 | 932 | unnamed protein product [Arabidopsis tha | 0.975 | 0.889 | 0.748 | 0.0 | |
| 356495039 | 948 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.894 | 0.769 | 0.0 | |
| 356527439 | 956 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.887 | 0.758 | 0.0 | |
| 297745112 | 1177 | unnamed protein product [Vitis vinifera] | 0.810 | 0.585 | 0.850 | 0.0 |
| >gi|359483090|ref|XP_002274115.2| PREDICTED: uncharacterized protein LOC100255062 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/851 (84%), Positives = 790/851 (92%), Gaps = 1/851 (0%)
Query: 1 MEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPF 60
+EVDS++LPVPVNFIFIGFEG GN +F+LHP+ELERWF KIDHIF HTRVP IGEVL PF
Sbjct: 130 LEVDSIHLPVPVNFIFIGFEGKGNHEFKLHPEELERWFTKIDHIFGHTRVPHIGEVLTPF 189
Query: 61 YRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDA 120
Y+ S+DKVQRHHLP +SHINYN SVHAIQM EKVTSVF++AI VLAR+DDVS NR+D D
Sbjct: 190 YKISIDKVQRHHLPIVSHINYNVSVHAIQMSEKVTSVFDNAINVLARRDDVSGNREDEDT 249
Query: 121 LWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHE-KRARYGYRRGLSDSEITFLKENK 179
WQVDV MMDVLF+SLVDYLQLENAYNIF+LNPKH+ K+A+YGYRRGLS+SEI FLKENK
Sbjct: 250 FWQVDVDMMDVLFSSLVDYLQLENAYNIFVLNPKHDGKKAKYGYRRGLSESEINFLKENK 309
Query: 180 DLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVE 239
DLQTKILQSG IPES+LAL+KI+RPLYEKHPM KF+WTI EDTDT EW NICLD LNNV+
Sbjct: 310 DLQTKILQSGTIPESVLALEKIKRPLYEKHPMEKFAWTITEDTDTVEWSNICLDALNNVD 369
Query: 240 KFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAF 299
+FY+GK+TADII KV+Q+LKGKNED+K L KELKSGDLS +HAECLTD+WIG +RWAF
Sbjct: 370 RFYQGKDTADIIHGKVIQILKGKNEDMKQLFGKELKSGDLSGIHAECLTDTWIGKDRWAF 429
Query: 300 IDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGD 359
IDL+AGPFSWGPAVGGEGVRTELSLPNV KTIGAV EISEDEAEDRLQDAIQEKFA FGD
Sbjct: 430 IDLSAGPFSWGPAVGGEGVRTELSLPNVKKTIGAVAEISEDEAEDRLQDAIQEKFAAFGD 489
Query: 360 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENH 419
KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQSFEG EYDE+H
Sbjct: 490 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFEGGEYDESH 549
Query: 420 KRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFH 479
+RKA++AL RME+WNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRH+ISPSIADGAFH
Sbjct: 550 RRKAVDALNRMESWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHIISPSIADGAFH 609
Query: 480 YYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALA 539
+Y+ ISFQLFFITQEKVR +KQLPV+LK+L +GLSSLLLPSQK +FSQ ML LSEDPALA
Sbjct: 610 FYDKISFQLFFITQEKVRHIKQLPVDLKALTEGLSSLLLPSQKAMFSQHMLPLSEDPALA 669
Query: 540 MAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEV 599
MAFSVARRAAAVP+LLVNGTYRKT+R+Y+DS+ILQ+QLQR+ND SLKG HAHSRSTLEV
Sbjct: 670 MAFSVARRAAAVPLLLVNGTYRKTIRTYLDSSILQHQLQRLNDHGSLKGMHAHSRSTLEV 729
Query: 600 PIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALA 659
PIFWF+H +PLLVDKHYQAKALSDMVIVVQSE SWESHLQCNG+SLLWDLR PIKAALA
Sbjct: 730 PIFWFLHSEPLLVDKHYQAKALSDMVIVVQSETSSWESHLQCNGKSLLWDLRRPIKAALA 789
Query: 660 SVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIIS 719
+ SEHLAGLLPLHLVYSQAHETAIEDW WSVGCNP SITSQGWHISQFQSDT+ARSYII+
Sbjct: 790 AASEHLAGLLPLHLVYSQAHETAIEDWAWSVGCNPLSITSQGWHISQFQSDTVARSYIIT 849
Query: 720 TLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYA 779
TLEESIQ VNSAIH L+ME TTE+TFKLFQSQER+LVNKYN+VV LWRRI+TVTG+LRY
Sbjct: 850 TLEESIQLVNSAIHRLVMEHTTEQTFKLFQSQERDLVNKYNHVVGLWRRIATVTGELRYV 909
Query: 780 DAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVL 839
DAMR LYTLEDASKGFV QVNA+I LLHPIHCTR RKVDVEFD+TTIPAFLIVLG+L+++
Sbjct: 910 DAMRLLYTLEDASKGFVGQVNASITLLHPIHCTRQRKVDVEFDMTTIPAFLIVLGVLWLV 969
Query: 840 LKPRRPKPKIN 850
L+PRRPKPKIN
Sbjct: 970 LRPRRPKPKIN 980
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255573801|ref|XP_002527820.1| conserved hypothetical protein [Ricinus communis] gi|223532794|gb|EEF34572.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224087367|ref|XP_002308138.1| predicted protein [Populus trichocarpa] gi|222854114|gb|EEE91661.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449442649|ref|XP_004139093.1| PREDICTED: uncharacterized protein LOC101207480 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297793327|ref|XP_002864548.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] gi|297310383|gb|EFH40807.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|42568619|ref|NP_200618.3| uncharacterized protein [Arabidopsis thaliana] gi|332009614|gb|AED96997.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|9759536|dbj|BAB11002.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356495039|ref|XP_003516388.1| PREDICTED: uncharacterized protein LOC100779643 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356527439|ref|XP_003532318.1| PREDICTED: uncharacterized protein LOC100800000 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297745112|emb|CBI38951.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 850 | ||||||
| TAIR|locus:2155846 | 945 | AT5G58100 [Arabidopsis thalian | 1.0 | 0.899 | 0.750 | 0.0 | |
| DICTYBASE|DDB_G0285083 | 1020 | DDB_G0285083 [Dictyostelium di | 0.295 | 0.246 | 0.323 | 1.1e-59 | |
| TAIR|locus:2098423 | 687 | AT3G28720 "AT3G28720" [Arabido | 0.324 | 0.401 | 0.247 | 3.2e-12 | |
| DICTYBASE|DDB_G0273745 | 808 | DDB_G0273745 "transmembrane pr | 0.262 | 0.275 | 0.236 | 4.3e-10 | |
| DICTYBASE|DDB_G0273189 | 808 | DDB_G0273189 "transmembrane pr | 0.262 | 0.275 | 0.236 | 4.3e-10 | |
| DICTYBASE|DDB_G0279945 | 641 | DDB_G0279945 [Dictyostelium di | 0.44 | 0.583 | 0.218 | 9.6e-10 |
| TAIR|locus:2155846 AT5G58100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3446 (1218.1 bits), Expect = 0., P = 0.
Identities = 639/851 (75%), Positives = 738/851 (86%)
Query: 1 MEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPF 60
MEVDS+YLPVPVNFIFIGFEG GNQDF+L P+ELERWF K+DH+FEHTRVP I EVL PF
Sbjct: 95 MEVDSVYLPVPVNFIFIGFEGKGNQDFKLRPEELERWFNKLDHMFEHTRVPQIKEVLNPF 154
Query: 61 YRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDA 120
Y+ +++K +HHLP IS +NYNFSVHAIQMGEKVTSV EHAIKVLARKDDV+TN+D+ A
Sbjct: 155 YKINIEKEVQHHLPIISRVNYNFSVHAIQMGEKVTSVIEHAIKVLARKDDVATNKDEESA 214
Query: 121 LWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHE-KRARYGYRRGLSDSEITFLKENK 179
L QVD MM+ +FTSLV+Y LE+AYN+FILNPKH+ K+A+YGYRRG S+SEI++LKENK
Sbjct: 215 LLQVDAEMMEFIFTSLVEYFHLEDAYNLFILNPKHDNKKAKYGYRRGFSESEISYLKENK 274
Query: 180 DLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVE 239
++ +LQSG E+ILA D +R+PLY++HPM+KFSWT AE+TDTAEW+N C D LN +E
Sbjct: 275 EILKNLLQSGKPSENILAFDMVRKPLYDRHPMLKFSWTNAEETDTAEWFNACQDALNKLE 334
Query: 240 KFYRGKETADIIQSKVLQLLKGXXXXXXXXXXXXXXSGDLSNLHAECLTDSWIGNNRWAF 299
+ GK+ A++IQSKVLQLL+G +GD SNL+AECLTD WIG RWAF
Sbjct: 335 QLSLGKDAAELIQSKVLQLLRGKNEDMKVFLEKDLRAGDFSNLNAECLTDIWIGKGRWAF 394
Query: 300 IDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGD 359
IDLTAGPFSWGP+VGGEGVRTELSLPNVG TIGAV EISEDEAED+LQ AIQ+KF+VFG+
Sbjct: 395 IDLTAGPFSWGPSVGGEGVRTELSLPNVGTTIGAVAEISEDEAEDKLQTAIQDKFSVFGE 454
Query: 360 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENH 419
DHQA+DILLAEID+YELFAFKHCKGRKVKLALCEELDERM+DLK ELQSF+GEEYDE H
Sbjct: 455 NDHQAVDILLAEIDVYELFAFKHCKGRKVKLALCEELDERMRDLKTELQSFDGEEYDETH 514
Query: 420 KRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFH 479
KRKA++ALRRME+WNLFSD EEFQNYTVARDTFLAHLGATLWGSMRH+ISPS+ADGAFH
Sbjct: 515 KRKAMDALRRMESWNLFSDEREEFQNYTVARDTFLAHLGATLWGSMRHIISPSVADGAFH 574
Query: 480 YYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPXXX 539
+YE ISFQL FITQEKVRQ+KQLPV+LK+LMDGLSSLLLPSQKP+FSQ MLTLSEDP
Sbjct: 575 HYEKISFQLVFITQEKVRQIKQLPVDLKALMDGLSSLLLPSQKPLFSQHMLTLSEDPALA 634
Query: 540 XXXXXXXXXXXXPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEV 599
P+LLVNGTYRKTVRSY+DS+ILQYQLQR+ND SLKG HAHSRSTLE+
Sbjct: 635 MAFSVARRAAAVPLLLVNGTYRKTVRSYLDSSILQYQLQRVNDHTSLKGGHAHSRSTLEI 694
Query: 600 PIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALA 659
PIFW I GDPLL+DKHYQAKALS+MV+VVQSE SWESHLQCNG+SLLWDLRSP+KAA+A
Sbjct: 695 PIFWLISGDPLLIDKHYQAKALSNMVVVVQSEASSWESHLQCNGRSLLWDLRSPVKAAMA 754
Query: 660 SVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIIS 719
SV+EHLAGLLPLHLVYS AHE+AIEDW WSVGCNPFS+TSQGW +SQFQSDTIARSY+I+
Sbjct: 755 SVAEHLAGLLPLHLVYSVAHESAIEDWTWSVGCNPFSVTSQGWLLSQFQSDTIARSYMIT 814
Query: 720 TLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYA 779
LEESIQ VNS IHLL +ERT +KTFKLFQS+EREL+NKY YVVSLWRR+S V G+ RY
Sbjct: 815 ALEESIQAVNSGIHLLRLERTNKKTFKLFQSRERELMNKYKYVVSLWRRLSNVAGETRYG 874
Query: 780 DAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVL 839
DAMR L+TLE+A+ FV +VNAT+ +LHPIHCT++RKV VE D+TTIPAF+IVL +LY +
Sbjct: 875 DAMRFLHTLEEATSSFVREVNATVGVLHPIHCTKERKVKVEVDMTTIPAFIIVLILLYAV 934
Query: 840 LKPRRPKPKIN 850
L+PR PKPKIN
Sbjct: 935 LRPRAPKPKIN 945
|
|
| DICTYBASE|DDB_G0285083 DDB_G0285083 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098423 AT3G28720 "AT3G28720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0273745 DDB_G0273745 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0273189 DDB_G0273189 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0279945 DDB_G0279945 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00033781001 | SubName- Full=Chromosome undetermined scaffold_69, whole genome shotgun sequence; (963 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 850 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 75.3 bits (184), Expect = 7e-14
Identities = 81/636 (12%), Positives = 184/636 (28%), Gaps = 154/636 (24%)
Query: 2 EVDSMY-LPVPVN---FIFIGFEGNGNQDFQLHPDELER----WFL-------------K 40
E+D + V+ +F + Q +E+ R + +
Sbjct: 50 EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 41 IDHIFEHTRVPPIGEVLAPFYRTSVDKVQ--RHHLPTISHINYNFSVHAIQMGE--KVTS 96
+I + R+ +V A + + + R L + + + K +
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDG--VLGSGK--T 164
Query: 97 VFEHAIKVLARKDDVSTNRDDVDALWQVDV----SMMDVLFTSLVDYLQLENAYNIFILN 152
A+ V V D W +++ S VL L+ + ++
Sbjct: 165 WV--ALDVC-LSYKVQCKMDF-KIFW-LNLKNCNSPETVL-------EMLQKLL--YQID 210
Query: 153 PKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMM 212
P R+ + S + + + ++L+S +L L ++
Sbjct: 211 PNWTSRSDH------SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA--F 262
Query: 213 KFSWTI------AEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDL 266
S I + TD L++ E ++ K L + +DL
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKYLDC---RPQDL 318
Query: 267 KFLLEKELKSGD--LSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSL 324
+E+ + + ++ AE + D G W W ++
Sbjct: 319 P----REVLTTNPRRLSIIAESIRD---GLATWDN---------W----------KHVNC 352
Query: 325 PNVGKTIGA-VEEISEDEAEDRLQDAIQEKFAVFGDKD----HQAIDILLAEIDIYELFA 379
+ I + + + E +VF + ++ ++ ++
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDR-----LSVF-PPSAHIPTILLSLIWFDVIKSDVMV 406
Query: 380 F-KHCKGRKVKLALCEELDERMQ----DLKNELQSFEGEEYDENHKRKAIEALRRMENWN 434
K +L E+ + + EL+ + E H R ++ + ++
Sbjct: 407 VVNKL----HKYSLVEKQPKESTISIPSIYLELKV-KLENEYALH-RSIVDHYNIPKTFD 460
Query: 435 LFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQE 494
Y F +H+G H+ + + + + F+ ++
Sbjct: 461 SDDLIPPYLDQY------FYSHIG-------HHLKNIEHPE-RMTLFRMVFLDFRFL-EQ 505
Query: 495 KVRQVKQLPVNLKSLMDGLSSL-----LLPSQKPVFSQRMLTLSEDPALAMAFSVARRAA 549
K+R S+++ L L + P + + + + + F +
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI-------LDFL--PKIE 556
Query: 550 AVPMLLVNGTYRKTVR---SYVDSAILQ---YQLQR 579
L+ Y +R D AI + Q+QR
Sbjct: 557 EN---LICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00