Citrus Sinensis ID: 003157

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840---

MASPAAVSSPFHRLASLKNPTISSPVNATSATSTVTATATATTASSSSPLDVFANDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALSVKAPGSQKS

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccc

cccHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHccccHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHcccHHHHHcccccccccHHHHHHHHHcccccHcccccHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccc

maspaavsspfhrlaslknptisspvnatsatsTVTATAtattasssspldvfandpilsaflspsfsstsfssaalssgspastAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSelsdpyksiksktiqlSNLHRTTELLQHTIRALRLSKKLRDliapaeaepekldlTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGgmeglnqaqVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMkaisgggagfgpggirgsgtpqigggvkAREGLWQRMGTCMDQLHSAVVAVWHLQRVlskkrdpfthVLLLDEViqegdpmlTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRetdvkgvlpaispegkgQMIAAIEIFQTAFLTLCLTRLSDLvnsvfpmssrgsvpskEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYqistgpearqipgpatsaQIKNFALCQHLQEIYTRMSsmitglppiaaevlspslgtiyGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMdaamdnnasPYMEELQKCILHFRSEFLsrllpssantttagTETICTRLVRSMASRVLIFFIRHAslvrplsesgklRMARDMAELELAVgqnlfpveqlgapyralrafrpLIFLEtsqlgaspllqdlppsvilhhlysrgpdelqsplqrnkltplqYSLWLDSQGEDQIWKGIKATLDDYAAKVRargdkefspvYPLMLQlgsalsvkapgsqks

maspaavsspfhrLASLKNPTISSPVNATSATSTVTATATattasssspldVFANDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAvsslqssvrrvrselsdpyksiksktiqlsnlhrTTELLQHTIRALRLSKKLRDLIAPaeaepekldltKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVfpmssrgsvpskeQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLlpssantttagteTICTRLVRSMASRVLIFFIrhaslvrplsesGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQlgsalsvkapgsqks

MASPAAVSSPFHRLASLKNPTISSPVNatsatstvtatatattassssPLDVFANDPIlsaflspsfsstsfssaalssgspastaERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALstvrsavsslqssvrrvrselsDPYKSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISgggagfgpggirgsgTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALSVKAPGSQKS

********************************************************************************************IRLL**************************************************************QLSNLHRTTELLQHTIRALRLSKKLRDLIAPA*****KLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFP**************RILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQIST************SAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSR************KLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLG*************

*******************************************************DPILSAFLSPSFSSTSFSSAAL***********LHHAIRLLENQLRSEVLSRHTDLLNQLSS***************SSLQSSVRRVRSELSDPYKSIKS**IQLSNLHRTTELLQHTIRALRLSKK*******************AAQLHCEIVTMCKEYDLSGIDVINEELLWVK*************LE**MEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALD*******************************EGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMK*******FVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVN*****************SRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAE******************AQIKNFALCQHLQEIYTRMS***************PSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQ*******************EELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLET********LQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDY************SPVYPLMLQLG*************

***********HRLASLKNPTISSPV*********************SPLDVFANDPILSAFLSPSF********************RLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHAL************************YKSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPM***********ISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALS*********

*************************************************LDVFANDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAIS********************GGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVL*******NNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALSVK*******

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		843	2.2.26 [Sep-21-2011]
Q8C0L8		829	Conserved oligomeric Golg	yes	no	0.926	0.942	0.318	1e-117
Q9UP83		839	Conserved oligomeric Golg	yes	no	0.875	0.879	0.326	1e-117
Q54HE0		898	Conserved oligomeric Golg	yes	no	0.442	0.415	0.221	8e-32
Q9VJD3		751	Conserved oligomeric Golg	yes	no	0.850	0.954	0.206	3e-29

>sp\|Q8C0L8\|COG5_MOUSE Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus GN=Cog5 PE=2 SV=3	Back alignment and function desciption

 Score =  424 bits (1089), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 265/833 (31%), Positives = 435/833 (52%), Gaps = 52/833 (6%)

Query: 31  ATSTVTATATATTASSSSPLDVFANDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLH 90
           +T +V     + +A  ++ +     D   S FL+  F   +++S ++     A    +L 
Sbjct: 6   STISVAGRGASGSAVVAATVQAILQDDCYSEFLNEDFDVKTYTSQSIHQAVIAEQLAKLA 65

Query: 91  HAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPY 150
             I  L+ +L  +V++RH DLL Q + +   E  L  +++ + +LQ +V R++S++ +PY
Sbjct: 66  QGISQLDKELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRMKSKIVEPY 125

Query: 151 KSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIV 210
             I ++T QL+ L    +LL+  IR L LSK+L+  +     E     +TKAAQ   E+ 
Sbjct: 126 NKIVARTAQLARLQVACDLLRRIIRILYLSKRLQGQLQGGSRE-----ITKAAQSLNELD 180

Query: 211 TMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGE 270
            + +  DLSGI+VI  +LL++     ++ N+A ++LE G+E  N  QVGT LQVF+NLG 
Sbjct: 181 YLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQGVETQNPTQVGTALQVFHNLGT 240

Query: 271 LKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLW 330
           LK TV  +V+ Y      S+N ALD+K ++        GG   +  P  G     R  LW
Sbjct: 241 LKETVTSVVDGYCAALEDSINNALDVKVLTQPSQSAVRGGPGRAAMPTPGSTAGFRASLW 300

Query: 331 QRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAF 390
             M   MD + +A   V HLQ+VL+KKRDP +H+  ++E+I++G P +    W  +  A 
Sbjct: 301 TNMEKLMDHICAACGQVQHLQKVLTKKRDPVSHICFIEEIIKDGQPEILYMFWNAVTLAL 360

Query: 391 ANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISR---------------------- 428
           ++   SA  +S F+K+ F   YPKLL +  +L +R+ +                      
Sbjct: 361 SSHFHSATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQQSSQNTQGTFSPSGTPDLCVDLP 420

Query: 429 --ETDVKGVL----PAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSV 482
             E D + +     P   PE    +  +++ ++ A+L+  L+RL D +N VFP   R   
Sbjct: 421 HMEDDTQDMFRLKRPDYDPEKA--LKDSLQPYEAAYLSKSLSRLFDPINLVFPPGGRNP- 477

Query: 483 PSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPG 542
           PS +++  I   I  E+    +D  LTL V + + K + L A ++E  +ST  +A Q+ G
Sbjct: 478 PSSDELDGITKTITSELNVAAVDANLTLAVSKNVAKTIQLYAVKSEQLLSTQGDASQVIG 537

Query: 543 PATSAQIKNFALCQHLQEIYTRMSSMI---TGLPPIAAEVLSPSLGTIYGVACDSVTSLF 599
           P T  Q +N  +   L +++  ++ ++   +     A + +  +L TI+ +  +++  L 
Sbjct: 538 PLTEGQKRNVGVVNSLFKLHQSVTKVVASQSSFSATAEQTIMSALKTIHDLMGNAIQPLL 597

Query: 600 QAMIDGLESCILQIHDQNFSVLGMDAAM-DNNASPYMEELQKCILHFRSEFLSRLLPSSA 658
            ++ D +E+ I+ +H ++FS     +   D   S YM+ELQ  I    +++         
Sbjct: 598 TSVADAIEAIIITMHQEDFSGASSSSGKPDVPCSLYMKELQGFIARVMNDYFKHF--ECL 655

Query: 659 NTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLF 718
           +     TE I        A R +  FIR+ASL+RPL E GKLR+A D A++ELAVG    
Sbjct: 656 DFVFDNTEAI--------AQRAIELFIRNASLIRPLGEGGKLRLAADFAQMELAVGPLCR 707

Query: 719 PVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPP-SVILHHLYSRGPDELQSPLQRN 777
            V  LG  YR LR+FRPL+F  +  +  SP + D+ P S+I+  L++R P EL+SP QR 
Sbjct: 708 RVSDLGKSYRMLRSFRPLLFQTSEHVADSPAVGDIIPFSIIIQFLFTRAPAELKSPFQRA 767

Query: 778 KLTPLQYSLWLDSQ-GEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQL 829
           + +  ++S WLD    E      ++  L+ Y   VR+R  KEF+PVYP+M+QL
Sbjct: 768 EWSHARFSQWLDDHPSEKDRLLLLRGALEAYVQSVRSRDGKEFAPVYPIMVQL 820

Required for normal Golgi function.
Mus musculus (taxid: 10090)

>sp\|Q9UP83\|COG5_HUMAN Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens GN=COG5 PE=1 SV=3	Back alignment and function description

>sp\|Q54HE0\|COG5_DICDI Conserved oligomeric Golgi complex subunit 5 OS=Dictyostelium discoideum GN=cog5 PE=3 SV=1	Back alignment and function description

>sp\|Q9VJD3\|COG5_DROME Conserved oligomeric Golgi complex subunit 5 OS=Drosophila melanogaster GN=fws PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		843
449456134		846	PREDICTED: conserved oligomeric Golgi co	0.978	0.975	0.798	0.0
255571404		845	conserved hypothetical protein [Ricinus	0.970	0.968	0.819	0.0
225446819		830	PREDICTED: conserved oligomeric Golgi co	0.971	0.986	0.793	0.0
356501473		831	PREDICTED: conserved oligomeric Golgi co	0.977	0.991	0.791	0.0
356553739		833	PREDICTED: conserved oligomeric Golgi co	0.979	0.991	0.788	0.0
357494245		826	Conserved oligomeric Golgi complex subun	0.963	0.983	0.773	0.0
224066563		844	predicted protein [Populus trichocarpa]	0.934	0.933	0.837	0.0
224082568		709	predicted protein [Populus trichocarpa]	0.839	0.998	0.841	0.0
297841507		832	hypothetical protein ARALYDRAFT_475901 [	0.966	0.979	0.752	0.0
15220602		832	Golgi transport complex-related protein	0.964	0.977	0.744	0.0

>gi\|449456134\|ref\|XP_004145805.1\| PREDICTED: conserved oligomeric Golgi complex subunit 5-like [Cucumis sativus]	Back alignment and taxonomy information

 Score = 1334 bits (3452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 671/840 (79%), Positives = 754/840 (89%), Gaps = 15/840 (1%)

Query: 2   ASPAAVSSPFHRLASLKNPTISSPVNATSATSTVTATATATTASSSSPLDVFANDPILSA 61
           ++PAA SSP HR +S  +P    PVN+T            TTA+++SPLD FA+DP+ SA
Sbjct: 21  STPAAASSPIHRFSSFNSPL---PVNST-----------TTTATATSPLDSFASDPVFSA 66

Query: 62  FLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHA 121
           FLSPSFSSTSFSSAALSSGSPASTAE+L  AIRLLE+QLR+EVLSRH DLL+QLSSL HA
Sbjct: 67  FLSPSFSSTSFSSAALSSGSPASTAEKLQKAIRLLESQLRNEVLSRHNDLLSQLSSLKHA 126

Query: 122 EHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIRALRLSK 181
           E+ALSTVRS VSSLQS+VR VRSELS+P   + +KT+Q SNLH+TTELLQHTIRALRLSK
Sbjct: 127 ENALSTVRSGVSSLQSTVRHVRSELSEPRNVVFTKTVQFSNLHQTTELLQHTIRALRLSK 186

Query: 182 KLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNE 241
           KLR+L + +  +PEKLDL KAAQLHCEI+++C E+DL+GIDV++EEL WVKE+G+KLR E
Sbjct: 187 KLRELASASADDPEKLDLAKAAQLHCEILSLCTEFDLAGIDVVDEELKWVKEIGDKLRTE 246

Query: 242 AMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAISG 301
           AMKVLE GMEGLNQA+VGTGLQVFYNLGELK T+E L+ KYK MGVKSV+VALDMK+ISG
Sbjct: 247 AMKVLERGMEGLNQAEVGTGLQVFYNLGELKATIEQLMTKYKGMGVKSVSVALDMKSISG 306

Query: 302 -GGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRDP 360
             G+GFGPGGIRGSGTPQIGGG KARE LWQR+GTC+DQLHS V+AVWHLQRVLSKKRDP
Sbjct: 307 SAGSGFGPGGIRGSGTPQIGGGAKAREALWQRLGTCLDQLHSIVIAVWHLQRVLSKKRDP 366

Query: 361 FTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMIE 420
           FTHVLLLDEVIQEGD MLTDRVWE LVKAFA+QMKSAFTASSFVKEIFT GYPKL SMIE
Sbjct: 367 FTHVLLLDEVIQEGDSMLTDRVWEALVKAFASQMKSAFTASSFVKEIFTMGYPKLFSMIE 426

Query: 421 NLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRG 480
           NLLERISR+TDVKGV+PAIS  GK QM+AAIEIFQTAFL  CL+RLSDLV+S+FP+SSRG
Sbjct: 427 NLLERISRDTDVKGVVPAISSTGKDQMVAAIEIFQTAFLGFCLSRLSDLVSSIFPVSSRG 486

Query: 481 SVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQI 540
           SVPSKEQIS+I+S IQEEIE+V MDGRLTLLVLR++GK L+L+AERAE QISTGPEARQ+
Sbjct: 487 SVPSKEQISKIISCIQEEIESVQMDGRLTLLVLRQVGKALLLLAERAECQISTGPEARQV 546

Query: 541 PGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQ 600
            GPAT+AQ+KNF LCQHLQEI+TR+SSMITGLP IA++VLSPSLG+IYGVACDSVTSLFQ
Sbjct: 547 NGPATAAQLKNFTLCQHLQEIHTRVSSMITGLPIIASDVLSPSLGSIYGVACDSVTSLFQ 606

Query: 601 AMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSANT 660
           AM+D LESCILQIHDQNF  LG++AAMDNNASPYMEELQK ILHFR EFLSRLLPSS N 
Sbjct: 607 AMLDSLESCILQIHDQNFGALGLNAAMDNNASPYMEELQKYILHFRGEFLSRLLPSSKNA 666

Query: 661 TTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPV 720
           T +GTE ICT+LVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPV
Sbjct: 667 TISGTENICTQLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFPV 726

Query: 721 EQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLT 780
           EQLGAPYRALRAFRPLIFLETSQL ASPLL DLP SVILHHLYSRGP+ELQSP+QRNKLT
Sbjct: 727 EQLGAPYRALRAFRPLIFLETSQLEASPLLHDLPASVILHHLYSRGPEELQSPMQRNKLT 786

Query: 781 PLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALSVKAPGS 840
           P QYSLWLDSQGE+Q+WKG+KATLDDYA +VRARGDKEF+ VYPLMLQ+GS+L+  +P +
Sbjct: 787 PQQYSLWLDSQGEEQVWKGVKATLDDYATRVRARGDKEFTAVYPLMLQVGSSLTQNSPAT 846

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255571404\|ref\|XP_002526650.1\| conserved hypothetical protein [Ricinus communis] gi\|223534017\|gb\|EEF35738.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|225446819\|ref\|XP_002279329.1\| PREDICTED: conserved oligomeric Golgi complex subunit 5 [Vitis vinifera] gi\|302143539\|emb\|CBI22100.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356501473\|ref\|XP_003519549.1\| PREDICTED: conserved oligomeric Golgi complex subunit 5-like [Glycine max]	Back alignment and taxonomy information

>gi\|356553739\|ref\|XP_003545210.1\| PREDICTED: conserved oligomeric Golgi complex subunit 5-like [Glycine max]	Back alignment and taxonomy information

>gi\|357494245\|ref\|XP_003617411.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi\|355518746\|gb\|AET00370.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula]	Back alignment and taxonomy information

>gi\|224066563\|ref\|XP_002302138.1\| predicted protein [Populus trichocarpa] gi\|222843864\|gb\|EEE81411.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224082568\|ref\|XP_002306745.1\| predicted protein [Populus trichocarpa] gi\|222856194\|gb\|EEE93741.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297841507\|ref\|XP_002888635.1\| hypothetical protein ARALYDRAFT_475901 [Arabidopsis lyrata subsp. lyrata] gi\|297334476\|gb\|EFH64894.1\| hypothetical protein ARALYDRAFT_475901 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15220602\|ref\|NP_176960.1\| Golgi transport complex-related protein [Arabidopsis thaliana] gi\|12324079\|gb\|AAG52007.1\|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gi\|332196602\|gb\|AEE34723.1\| Golgi transport complex-related protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		843
TAIR\|locus:2200246		832	AT1G67930 [Arabidopsis thalian	0.973	0.986	0.677	3.3e-292
UNIPROTKB\|F1P834		996	COG5 "Uncharacterized protein"	0.436	0.369	0.351	1e-101
MGI\|MGI:2145130		829	Cog5 "component of oligomeric	0.436	0.443	0.330	1.3e-98
UNIPROTKB\|Q9UP83		839	COG5 "Conserved oligomeric Gol	0.854	0.858	0.304	8.2e-83
UNIPROTKB\|F1N9C8		800	COG5 "Uncharacterized protein"	0.855	0.901	0.303	1e-82
UNIPROTKB\|F1N1T8		825	COG5 "Conserved oligomeric Gol	0.854	0.872	0.302	1.6e-79
UNIPROTKB\|G3N173		528	COG5 "Conserved oligomeric Gol	0.436	0.696	0.350	4.2e-71
UNIPROTKB\|F1P849		629	COG5 "Uncharacterized protein"	0.702	0.941	0.304	2.7e-68
ZFIN\|ZDB-GENE-041210-47		809	cog5 "component of oligomeric	0.468	0.488	0.343	3.8e-54
RGD\|1563296		438	Cog5 "component of oligomeric	0.251	0.484	0.363	1.9e-53

TAIR\|locus:2200246 AT1G67930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2806 (992.8 bits), Expect = 3.3e-292, P = 3.3e-292
 Identities = 566/835 (67%), Positives = 648/835 (77%)

Query:     2 ASPAAVSSPFHRLASLKNPTISSPVNXXXXXXXXXXXXXXXXXXXXXPLDVFANDPIXXX 61
             +SP+  S    RL++ KNP  SS                        PLD FA DPI   
Sbjct:     6 SSPSPSSPSLQRLSTFKNPPPSS-------LSSGAPPPQTPSSSSSSPLDSFATDPILSP 58

Query:    62 XXXXXXXXXXXXXXXXXXXXXXXXXERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHA 121
                                      ERLH AIRLL++QLR++V+SRH +LL QLSSL+HA
Sbjct:    59 FLSSSFSSASFSSAALASGSPASTAERLHQAIRLLDSQLRNDVISRHPELLAQLSSLSHA 118

Query:   122 EHALXXXXXXXXXXXXXXXXXXXXXXDPYKSIKSKTIQLSNLHRTTELLQHTIRALRLSK 181
             + +L                      +P KSI+SK++QLSNLH  TELL H++R LRLSK
Sbjct:   119 DVSLSSLRSSVSSLQSSIRRVRSDLSEPIKSIRSKSVQLSNLHTATELLSHSVRTLRLSK 178

Query:   182 KLRDLIAPAE-AEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRN 240
             KLRDL   A+  +P+K+DLTKAAQ H EI+TMCKEYDL GIDVI+EE+ +V E+GEKLR+
Sbjct:   179 KLRDL---ADFPDPDKIDLTKAAQFHFEILTMCKEYDLFGIDVIDEEIKFVTEIGEKLRS 235

Query:   241 EAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALDMKAI- 299
             EAMKVLE GMEGLNQA+VGTGLQVFYNLGELK TV+ LVNKYK M VKSV+VA+DMKAI 
Sbjct:   236 EAMKVLERGMEGLNQAEVGTGLQVFYNLGELKSTVDQLVNKYKGMAVKSVSVAMDMKAIT 295

Query:   300 SXXXXXXXXXXXXXXXTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLSKKRD 359
             S               +P IGGG K RE LWQRM +CM+QL S VVAVWHLQRVLSKKRD
Sbjct:   296 SGSGGGFGPGGIRSSGSPHIGGGAKVREALWQRMASCMEQLCSLVVAVWHLQRVLSKKRD 355

Query:   360 PFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKLLSMI 419
             PFTHVLLLDEVI+EGD MLTDRVW+ LVKAF +QMKSA+TASSFVKEIFT GYPKL+SMI
Sbjct:   356 PFTHVLLLDEVIKEGDSMLTDRVWDALVKAFTSQMKSAYTASSFVKEIFTMGYPKLVSMI 415

Query:   420 ENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSR 479
             ENLLERISR+TDVKGVLPAI+ E K QM+A I IFQTAFL+LC  RLSDLVNS+FPMSSR
Sbjct:   416 ENLLERISRDTDVKGVLPAINLERKEQMVACIAIFQTAFLSLCFGRLSDLVNSIFPMSSR 475

Query:   480 GSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQ 539
             GS+PSKEQIS++LS IQ+EIEAVH D RLTLLVLREIGK L  +A+RAE QISTGPE RQ
Sbjct:   476 GSLPSKEQISQVLSHIQDEIEAVHPDARLTLLVLREIGKALSNLAQRAECQISTGPETRQ 535

Query:   540 IPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLF 599
             I GPATS QI+NF LCQHLQ I+T +SSM+  LP IA +VLSP L  IY  AC+ VT LF
Sbjct:   536 ISGPATSTQIRNFTLCQHLQGIHTHISSMVADLPSIATDVLSPYLAAIYDAACEPVTPLF 595

Query:   600 QAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLSRLLPSSAN 659
             +AM D LESCILQIHDQNF     DA MDNNAS YMEELQ+ ILHFR EFLSRLLPS+AN
Sbjct:   596 KAMRDKLESCILQIHDQNFGA--DDADMDNNASSYMEELQRSILHFRKEFLSRLLPSAAN 653

Query:   660 TTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLFP 719
               TAGTE+ICTRL R MASRVLIF+IRHASLVRPLSE GKLRMA+DMAELELAVGQNLFP
Sbjct:   654 ANTAGTESICTRLTRQMASRVLIFYIRHASLVRPLSEWGKLRMAKDMAELELAVGQNLFP 713

Query:   720 VEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPPSVILHHLYSRGPDELQSPLQRNKL 779
             VEQLGAPYRALRAFRPL+FLETSQ+G+SPL+ DLPPS++LHHLY+RGPDEL+SP+Q+N+L
Sbjct:   714 VEQLGAPYRALRAFRPLVFLETSQMGSSPLINDLPPSIVLHHLYTRGPDELESPMQKNRL 773

Query:   780 TPLQYSLWLDSQGEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALS 834
             +P QYSLWLD+Q EDQIWKGIKATLDDYA K+R+RGDKEFSPVYPLMLQ+GS+L+
Sbjct:   774 SPKQYSLWLDNQREDQIWKGIKATLDDYAVKIRSRGDKEFSPVYPLMLQIGSSLT 828

GO:0009507 "chloroplast" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB\|F1P834 COG5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:2145130 Cog5 "component of oligomeric golgi complex 5" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UP83 COG5 "Conserved oligomeric Golgi complex subunit 5" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N9C8 COG5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N1T8 COG5 "Conserved oligomeric Golgi complex subunit 5" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|G3N173 COG5 "Conserved oligomeric Golgi complex subunit 5" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P849 COG5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041210-47 cog5 "component of oligomeric golgi complex 5" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

RGD\|1563296 Cog5 "component of oligomeric golgi complex 5" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UP83	COG5_HUMAN	No assigned EC number	0.3267	0.8754	0.8796	yes	no
Q8C0L8	COG5_MOUSE	No assigned EC number	0.3181	0.9264	0.9420	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		843
pfam10392		132	pfam10392, COG5, Golgi transport complex subunit 5	9e-31
pfam06148		133	pfam06148, COG2, COG (conserved oligomeric Golgi)	4e-04

>gnl\|CDD\|192566 pfam10392, COG5, Golgi transport complex subunit 5	Back alignment and domain information

 Score =  117 bits (294), Expect = 9e-31
 Identities = 44/132 (33%), Positives = 78/132 (59%), Gaps = 8/132 (6%)

Query: 60  SAFLSPSFSSTSFSSAALSS--------GSPASTAERLHHAIRLLENQLRSEVLSRHTDL 111
            AFL P F   SF++A L +           ++  +RL++ I+ L+ ++R+ + S H +L
Sbjct: 1   EAFLDPDFDPKSFANALLLATNNNDDTPLDLSTPLKRLNYDIQELDRRIRTLITSNHLEL 60

Query: 112 LNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQ 171
           L+ LSS+  A   LST++S++  L +S  R++S++ +PY+        L  LH+TT+LL+
Sbjct: 61  LSHLSSIKSASSILSTLKSSLEYLSASYERLKSDVLEPYERALKLQSALKRLHQTTDLLR 120

Query: 172 HTIRALRLSKKL 183
             +R L LS++L
Sbjct: 121 ALLRFLHLSRQL 132

The COG complex, the peripheral membrane oligomeric protein complex involved in intra-Golgi protein trafficking, consists of eight subunits arranged in two lobes bridged by Cog1. Cog5 is in the smaller, B lobe, bound in with Cog6-8, and is itself bound to Cog1 as well as, strongly, to Cog7. Length = 132

>gnl\|CDD\|218912 pfam06148, COG2, COG (conserved oligomeric Golgi) complex component, COG2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		843
KOG2211		797	consensus Predicted Golgi transport complex 1 prot	100.0
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	99.97
KOG2180		793	consensus Late Golgi protein sorting complex, subu	99.89
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	99.78
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	99.62
KOG2211		797	consensus Predicted Golgi transport complex 1 prot	99.54
PF10475		291	DUF2450: Protein of unknown function N-terminal do	99.14
KOG2307		705	consensus Low density lipoprotein receptor [Intrac	99.1
KOG2176		800	consensus Exocyst complex, subunit SEC15 [Intracel	98.57
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	98.26
PF07393		710	Sec10: Exocyst complex component Sec10; InterPro:	98.25
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	98.22
PF06148		133	COG2: COG (conserved oligomeric Golgi) complex com	98.07
KOG2346		636	consensus Uncharacterized conserved protein [Funct	97.89
KOG0412		773	consensus Golgi transport complex COD1 protein [In	97.54
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	97.11
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	96.95
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	96.73
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	96.46
PF15469		182	Sec5: Exocyst complex component Sec5	96.42
KOG2347		934	consensus Sec5 subunit of exocyst complex [Intrace	96.39
PF10474		234	DUF2451: Protein of unknown function C-terminus (D	95.92
KOG4182		828	consensus Uncharacterized conserved protein [Funct	94.55
PF04129		508	Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 V	91.81
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	91.31
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	88.81
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	87.54
KOG2115		951	consensus Vacuolar sorting protein VPS45 [Intracel	86.77
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	85.41
KOG2033		863	consensus Low density lipoprotein B-like protein [	85.21
PRK11637		428	AmiB activator; Provisional	80.37

>KOG2211 consensus Predicted Golgi transport complex 1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=7.5e-141  Score=1169.00  Aligned_cols=774  Identities=38%  Similarity=0.572  Sum_probs=717.8

Q ss_pred             CCCCCCCcccc-cccccCCCCCCCCCCCccccccccccccccCCCCChhhhhcCChhhhcccCCCCCHHHHHHhHhcCCC
Q 003157            3 SPAAVSSPFHR-LASLKNPTISSPVNATSATSTVTATATATTASSSSPLDVFANDPILSAFLSPSFSSTSFSSAALSSGS   81 (843)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~FL~~dFd~~~fan~lL~~~~   81 (843)
                      +|.+++|...| ++.+++|      +|..          -..+.+..+.+.|+.||.|.+|++.+|+...|.+.-+.+..
T Consensus         9 ~dS~s~psl~R~~a~~~np------~p~~----------l~~G~~~~~~r~l~qdp~ls~fln~~fSv~~~tSas~~s~~   72 (797)
T KOG2211|consen    9 CDSSSAPSLNRKVAGLHNP------LPKQ----------LRKGVETNLPRLLEQDPALSSFLNTLFSVQMMTSASKESNR   72 (797)
T ss_pred             CCCCCCchhhhhhhccCCC------Chhh----------hhcCccccchHHHhcCccccccccchhhhhhHHHHHHhcCC
Confidence            45566777777 8888874      1111          12234556779999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhhCHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 003157           82 PASTAERLHHAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLS  161 (843)
Q Consensus        82 i~~~l~kL~~~i~eld~~I~~~V~~n~~~LL~q~~~i~~le~~l~~i~~~i~~L~~s~~RLr~~I~ePy~~i~~~t~~L~  161 (843)
                      |.+++++|..+|.++|+|++.+|..+|.+||+|++++...+..+.++...+..|+.+++||+.++.+||+.+..++.+|.
T Consensus        73 ia~q~~~L~q~lr~ldrqLh~qv~~Rh~allaQat~~~~~d~~l~sl~~~v~~lqs~i~riknd~~epyk~i~~kt~vl~  152 (797)
T KOG2211|consen   73 IATQCDDLTQKLRELDRQLHAQVLKRHMALLAQATEELFEDLELRSLLVKVAELQSEIKRIKNDNKEPYKIIWLKTMVLT  152 (797)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 003157          162 NLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVGEKLRNE  241 (843)
Q Consensus       162 rL~~t~~LLR~~~rfl~L~kRL~~~~~~~~~~~~~~dl~kaA~~l~EL~~Ll~~~~L~~I~vV~~~~~~v~~~r~~v~~~  241 (843)
                      |||.++++||+++|.+.|.+||+.+.+.+.     +|+.|+|++|+||++++++.+|+||++|++++.+|.+.+.+|+++
T Consensus       153 rLhva~~lLrrsgr~l~LskkL~~l~~~~~-----~d~traaq~lneLd~l~e~~dlsgIdvId~el~fv~~s~~evrN~  227 (797)
T KOG2211|consen  153 RLHVAENLLRRSGRALELSKKLASLNSSMV-----VDATRAAQTLNELDSLLEVLDLSGIDVIDKELMFVSNSSPEVRNK  227 (797)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCC-----HhHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHhccHHHHHH
Confidence            999999999999999999999999988765     899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccchhhhhhHHHHhhhhcchHHHHHHHHHHHHHHHHHHHH-HhhchhhhhcCCCC--CCCCCCCCCC-CC
Q 003157          242 AMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVN-VALDMKAISGGGAG--FGPGGIRGSG-TP  317 (843)
Q Consensus       242 a~~~L~~gl~~~n~~~v~saLqv~~nLg~L~~~v~~lv~~~~~~~~k~i~-~ald~~~Ls~~~~~--~~~~~~r~~~-~p  317 (843)
                      +...|..||++.|+++|++|||||||||+|.++++.+++.|+...++.++ .+.|+..|.+.|.+  ..||+.|..| +|
T Consensus       228 a~~vLe~glq~~ne~qvgtglqvfynfgtLekt~d~lv~~y~ad~e~sl~~va~dikvlns~gs~s~~~pgp~Rs~g~sp  307 (797)
T KOG2211|consen  228 ALPVLEAGLQSHNEQQVGTGLQVFYNFGTLEKTADLLVSRYPADTEYSLRFVAQDIKVLNSKGSSSPALPGPLRSLGNSP  307 (797)
T ss_pred             HHHHHHHHHHhhcHHHHhhHHHHHHhcchHHHHHHHHHHhcccchHHHHHHHHhhhHHhhcCCCCCCCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999 89999988854433  4456667777 99


Q ss_pred             CcCchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCCCCcchhhHHHHHhcCCCcchHHHHHHHHHHHHHHHHH
Q 003157          318 QIGGGVKAREGLWQRMGTCM-DQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKS  396 (843)
Q Consensus       318 ~~~~~~~~~~~lw~~le~~~-d~i~~~~~~v~~Le~vL~kkrdp~t~~~fL~~l~~~~~~sl~~~FW~~la~~~~~~~~~  396 (843)
                      .+|+++++|+.+|+++.++| |+++..|++|||||+||+||||   |.+|.+++.+.++++++++||.++.+.|.++|.+
T Consensus       308 ~~g~ta~lra~lw~nm~slm~d~lf~~c~qv~hlq~vl~kkrD---h~~l~~e~sk~gd~cI~~rfw~~l~qal~sqfd~  384 (797)
T KOG2211|consen  308 LTGSTARLRALLWENMFSLMHDNLFVDCIQVAHLQEVLKKKRD---HAELSQEMSKNGDKCIPERFWKKLEQALHSQFDD  384 (797)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998 9999999999999999999998   9999999999999999999999999999999999


Q ss_pred             HHhcCchhhhHhhhchhhHHHHHHHHHHHHhhhhcccccCCCCCcchhHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCC
Q 003157          397 AFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPM  476 (843)
Q Consensus       397 a~~~s~~v~q~L~~~yPkllrl~~~l~~rl~~~~~~~g~~~~~~~e~~~~l~~sl~~fe~ayLsrs~~Rl~~~v~~~Fp~  476 (843)
                      +... .|++++|..|||||+++++++++|+..      ..|+++-+.++.+.+.+.|||++|+|+|+ |    +|..||+
T Consensus       385 a~~~-~fltq~f~~gypKLl~~a~gL~kRl~~------~~p~~~~~~ke~l~a~~ap~e~aylSkca-R----~n~~fp~  452 (797)
T KOG2211|consen  385 ALLG-DFLTQNFMTGYPKLLQTADGLTKRLPA------ESPSVTAIQKETLDAIVAPVENAYLSKCA-R----MNVEFPG  452 (797)
T ss_pred             hhHH-HHHHHHHHhchHHHHHHHHhHHHHhhc------ccCCccccHHHHHHHHHHHHHHHHHHHHH-H----hheecCC
Confidence            9886 999999999999999999999999976      23445555578899999999999999999 7    8999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccCCCCCHHHHHHHHHHH
Q 003157          477 SSRGSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQ  556 (843)
Q Consensus       477 ~~r~~~Ps~~el~~i~r~i~~EL~~a~~d~~L~~~v~~~v~k~l~l~~~k~e~~l~~~~~a~qv~~~~t~~Q~~N~~L~n  556 (843)
                      ++|+++|+++|++.+++.|..||+++..|..|+..|+++++|+++.||.|.|+++++|+|++||+||+|..|++|++++|
T Consensus       453 ~gr~~lPs~eeld~~I~hi~~el~av~~d~rlTlavs~~~ak~i~~l~~kae~qistg~D~rQvigp~ts~q~rnv~l~n  532 (797)
T KOG2211|consen  453 MGRSVLPSMEELDTYINHIDMELAAVSRDVRLTLAVSQIAAKVIDSLILKAELQISTGSDERQVIGPDTSRQLRNVRLMN  532 (797)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCCchHHHHHHHHHHH
Confidence            99977999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCcHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc--cCccCCCCCChh
Q 003157          557 HLQEIYTRMSSMITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLG--MDAAMDNNASPY  634 (843)
Q Consensus       557 ~l~~~~~~l~~~l~~~p~~~~~~l~~sl~~~~~~~~~~v~pL~~s~~~~ie~il~~MH~e~~~~~~--~~~~~~~~~S~Y  634 (843)
                      .|+++|.++..                 ..|++.+++++.|++..+.+.+|.||.+||.++|+...  .+..++++||.|
T Consensus       533 ~l~kyhdsvr~-----------------~aI~~s~e~avlpl~t~~~dilesiI~tis~~~ls~~~lss~~~pd~~~s~Y  595 (797)
T KOG2211|consen  533 WLSKYHDSVRL-----------------LAIFGSDEDAVLPLETVKKDILESIIVTISPSELSLPNLSSKWTPDEYVSWY  595 (797)
T ss_pred             HHHHhhhhhHH-----------------HHHHHhhhhhhhHHHHHHHHHHHHHHhhcCHhhcCCcccccccCCCcchhHH
Confidence            99999999885                 46788899999999999999999999999999999662  234488999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHHHHHHHc
Q 003157          635 MEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVG  714 (843)
Q Consensus       635 m~eL~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~la~r~i~~Fl~hasLlRPL~e~GklrLa~D~a~LE~aLs  714 (843)
                      |+|||.||.|++++|+++|+++..+.   ++.  .+.....+|.||+++|++|||++|||+|.|||||+.||+|+|+||+
T Consensus       596 meelQ~fVlrf~s~~~s~f~~s~~~~---~~~--~~~~t~~~akr~veffirhasl~rplse~gkmRlaqD~aemElaVg  670 (797)
T KOG2211|consen  596 MEELQLFVLRFLSGLVSSFNSSVISR---GQQ--HYVDTYPRAKRIVEFFIRHASLERPLSELGKMRLAQDIAEMELAVG  670 (797)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHhhc---ccc--cchhhHHHHHHHHHHhhhhhhhcCchhhhhhhhHHHHhHHHHHhhC
Confidence            99999999999999999999773211   111  1123578999999999999999999999999999999999999999


Q ss_pred             ccCCCccccchhHHHHHhhhhhccCCchhhccCCC-CCCCChH-HHHHHHHccCCCCCCChhhhcCCCHHHHHHHhhcCC
Q 003157          715 QNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPL-LQDLPPS-VILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQG  792 (843)
Q Consensus       715 ~~l~~~~~lG~~y~~LRafR~LLf~~~~~i~~~~~-~~~lp~~-~vl~hL~srap~~L~sPh~~~~ws~~~y~~Wld~h~  792 (843)
                      |+|.+++++|+|||+||+||||+|++.++|+++|. ++++||+ |||||||+|||.||.|||++|.||+.+|+.|||+|+
T Consensus       671 p~c~~ve~lgkpyr~lrafrpl~vqt~e~i~sspl~~ddv~ps~IvL~~lftrapaeL~sp~qta~ws~~r~s~wLd~h~  750 (797)
T KOG2211|consen  671 PECIEVEVLGKPYRDLRAFRPLMVQTVEGILSSPLVRDDVEPSLIVLRYLFTRAPAELNSPLQTASWSQDRTSMWLDSHG  750 (797)
T ss_pred             cCCccHHHcCCchhhHhhccchHHHhhhhhhcCccccccccchHHHHHHHhccCchhhcCchhhcccChHHHHHHHhcCc
Confidence            99999999999999999999999999999999999 6776665 999999999999999999999999999999999995


Q ss_pred             -hHhHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHhh
Q 003157          793 -EDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQLGSALS  834 (843)
Q Consensus       793 -e~e~l~~i~~~L~~y~~~v~~~~~~~~~~~y~~m~~~~~~~~  834 (843)
                       |+|+|++|+|||++|..++|.||++||+||||+|+|+++++.
T Consensus       751 ~E~e~l~lisgAl~ay~~s~rsrg~kefapvyp~mvq~ls~a~  793 (797)
T KOG2211|consen  751 KEMEVLSLISGALKAYLTSLRSRGSKEFAPVYPAMVQDLSRAQ  793 (797)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCcccccccHHHHHHHHHHh
Confidence             999999999999999999999999999999999999999753

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>KOG2211 consensus Predicted Golgi transport complex 1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex	Back alignment and domain information

>KOG2346 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known	Back alignment and domain information

>KOG4182 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		843
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 78.0 bits (191), Expect = 7e-15
 Identities = 78/573 (13%), Positives = 155/573 (27%), Gaps = 160/573 (27%)

Query: 331 QRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKA- 389
             M     +        +  + +LS   D F       +V      +L+    + ++ + 
Sbjct: 5   HHMDFETGEHQ------YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSK 58

Query: 390 ------------FANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISRETDVKGVLP 437
                         ++ +       FV+E+    Y         L+  I  E        
Sbjct: 59  DAVSGTLRLFWTLLSKQEE--MVQKFVEEVLRINYKF-------LMSPIKTEQ------- 102

Query: 438 AISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSVPSKEQISRI---LSR 494
              P           ++          RL +  N VF    + +V   +   ++   L  
Sbjct: 103 -RQPSMM------TRMYIE-----QRDRLYN-DNQVFA---KYNVSRLQPYLKLRQALLE 146

Query: 495 IQ-EEIEAVH-MDGRLTLLVLREIGK-VLILVAERAE----------YQISTG----PEA 537
           ++  +   +  + G          GK  + L    +           + ++      PE 
Sbjct: 147 LRPAKNVLIDGVLG---------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 538 ---------RQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLP-PIAAEVL----SPS 583
                     QI    TS    +  +   +  I   +  ++   P      VL    +  
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK 257

Query: 584 LGTIYGVACDS-VTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCI 642
               + ++C   +T+ F+ + D L +        + S+      +  +       L K +
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSA----ATTTHISLDHHSMTLTPDEV--KSLLLKYL 311

Query: 643 LHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRM 702
                +     LP    TT     +I    +R   +       +H           KL  
Sbjct: 312 DCRPQD-----LPREVLTTNPRRLSIIAESIRDGLAT--WDNWKH-------VNCDKLTT 357

Query: 703 ARDMAELELAVGQNLFPVEQLGAPYRALRAFR-----PLIFLE--------------TSQ 743
             + + L       L P E     +  L  F      P I L                ++
Sbjct: 358 IIESS-LN-----VLEPAEYRKM-FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 744 LGASPLL-QDLPPSVI-LHHLY--SRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKG 799
           L    L+ +    S I +  +Y   +   E +  L R+ +    Y++      +D     
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--HYNIPKTFDSDD----L 464

Query: 800 IKATLDDY---------AAKVRARGDKEFSPVY 823
           I   LD Y                    F  V+
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		843
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	97.73
2a2f_X		325	Exocyst complex component SEC15; all helical struc	96.08
3ns4_A		271	Vacuolar protein sorting-associated protein 53; GA	93.07
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	91.61
3n1e_A		141	Vacuolar protein sorting-associated protein 54; sp	90.37
2olt_A		227	Hypothetical protein; structural genomics, joint c	86.41

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

Probab=97.73  E-value=0.0056  Score=68.48  Aligned_cols=270  Identities=12%  Similarity=0.139  Sum_probs=175.0

Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhcCC------------CC--CCCCCCCHHHHHHHHHHHHHHHHHhc--CChHHHHHHHH
Q 003157          451 IEIFQTAFLTLCLTRLSDLVNSVFP------------MS--SRGSVPSKEQISRILSRIQEEIEAVH--MDGRLTLLVLR  514 (843)
Q Consensus       451 l~~fe~ayLsrs~~Rl~~~v~~~Fp------------~~--~r~~~Ps~~el~~i~r~i~~EL~~a~--~d~~L~~~v~~  514 (843)
                      +..+.+.|+++....|.+-++.++-            |.  ..|.+. ..-...+.+.|.+-+++|.  ....+...|..
T Consensus         9 ~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~-t~~~~dvfqml~eql~~a~~~~~~~l~~~v~~   87 (399)
T 2fji_1            9 KETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLF-LDGTKTCFQMFTQQVEVAAGTNQAKILVGVVE   87 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEE-CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCee-CCchHHHHHHHHHHHHHHHhCCCcccHHHHHH
Confidence            5566777777777776665555441            11  011111 2233445566666888884  44446666666


Q ss_pred             HHHHHHHHHHHHHHhhcc--------------cCCCcccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhcC----CcHH
Q 003157          515 EIGKVLILVAERAEYQIS--------------TGPEARQI-PGPATSAQIKNFALCQHLQEIYTRMSSMITG----LPPI  575 (843)
Q Consensus       515 ~v~k~l~l~~~k~e~~l~--------------~~~~a~qv-~~~~t~~Q~~N~~L~n~l~~~~~~l~~~l~~----~p~~  575 (843)
                      ...+.+..|.......+.              .+++...- .+.+..-+..-|+++|....|...+.++..+    ..+.
T Consensus        88 ~~~~~L~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~liA~~Nn~~~~~e~~~~l~~~~~~~~~~~  167 (399)
T 2fji_1           88 RFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKV  167 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCCTTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccccccHHHhhhhhhccHHHHHHHHHHHHHHHHHhccHH
Confidence            666666555433322211              11111000 0112223667788999988888777776653    3333


Q ss_pred             H----HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccCccCCCCCChhHHHHHHHHHHHHHHhhc
Q 003157          576 A----AEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASPYMEELQKCILHFRSEFLS  651 (843)
Q Consensus       576 ~----~~~l~~sl~~~~~~~~~~v~pL~~s~~~~ie~il~~MH~e~~~~~~~~~~~~~~~S~Ym~eL~~~l~~~~~~~l~  651 (843)
                      .    ...+....+.+..+...++.-|++.+...+.+.+..+....|...        +   +|+.++..+.....+|-.
T Consensus       168 ~~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~dl~p~~~~lft~~W~~~--------~---~v~~i~~ti~dy~~d~~~  236 (399)
T 2fji_1          168 YEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMG--------S---QAQQIADTLDEYLLDIKP  236 (399)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTHHHHTTTTSGGGTTC--------C---HHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhcCC--------c---HHHHHHHHHHHHHHHHHH
Confidence            2    234666677788888889999999999999999988877777531        1   899999999888888777


Q ss_pred             ccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHhhccccCC---hhHHHHHHHHHHHHHHHHcccCCCccc----cc
Q 003157          652 RLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLS---ESGKLRMARDMAELELAVGQNLFPVEQ----LG  724 (843)
Q Consensus       652 ~~~~~~~~~~~~~~~~~~~~~~~~la~r~i~~Fl~hasLlRPL~---e~GklrLa~D~a~LE~aLs~~l~~~~~----lG  724 (843)
                      ++.|.           +...++..+..+++..|++..---..+.   +.|..+|..|...|..-+..+...-..    +.
T Consensus       237 ~L~~~-----------~~~~l~~~~~~~~v~~Yl~~l~~~~~~~~~~~~~~~~l~~D~~~l~~~f~~~~~~~~~~~~~v~  305 (399)
T 2fji_1          237 QMNSV-----------LFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTLIT  305 (399)
T ss_dssp             GSCHH-----------HHHHHHHHHHHHHHHHHHHGGGGCCCCCCGGGHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHH
T ss_pred             HhChH-----------HHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHH
Confidence            77643           5667777888888888888665322355   899999999999999988877764322    66


Q ss_pred             hhHHHHHhhhhhccCCc-hhh
Q 003157          725 APYRALRAFRPLIFLET-SQL  744 (843)
Q Consensus       725 ~~y~~LRafR~LLf~~~-~~i  744 (843)
                      ..++.|..++. |-.++ +.|
T Consensus       306 ~~~~~l~~l~~-L~~d~~~~i  325 (399)
T 2fji_1          306 QNFTVMEFFMD-LSCEPIDSI  325 (399)
T ss_dssp             HHHHHHHHHHH-HHHSCGGGH
T ss_pred             HHHHHHHHHHH-hcCCcHHHH
Confidence            67788888888 66666 443

PyMOL of 2fji

>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}	Back alignment and structure

>3ns4_A Vacuolar protein sorting-associated protein 53; GARP complex component, helical bundle, membrane tethering C membrane traffic, VPS51; HET: MSE; 2.90A {Saccharomyces cerevisiae}	Back alignment and structure

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A	Back alignment and structure

>2olt_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Shewanella oneidensis} PDB: 2iiu_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00