Citrus Sinensis ID: 003533
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L6Y1 | 797 | Ubiquitin carboxyl-termin | yes | no | 0.922 | 0.939 | 0.748 | 0.0 | |
| P56399 | 858 | Ubiquitin carboxyl-termin | yes | no | 0.918 | 0.869 | 0.472 | 0.0 | |
| P45974 | 858 | Ubiquitin carboxyl-termin | yes | no | 0.918 | 0.869 | 0.468 | 0.0 | |
| Q5R407 | 858 | Ubiquitin carboxyl-termin | yes | no | 0.918 | 0.869 | 0.466 | 0.0 | |
| F1QFS9 | 860 | Ubiquitin carboxyl-termin | no | no | 0.887 | 0.838 | 0.423 | 1e-177 | |
| Q92995 | 863 | Ubiquitin carboxyl-termin | no | no | 0.911 | 0.857 | 0.422 | 1e-176 | |
| E1BMF7 | 863 | Ubiquitin carboxyl-termin | no | no | 0.876 | 0.825 | 0.431 | 1e-176 | |
| Q5BKP2 | 858 | Ubiquitin carboxyl-termin | no | no | 0.876 | 0.829 | 0.434 | 1e-174 | |
| E1BY77 | 862 | Ubiquitin carboxyl-termin | no | no | 0.870 | 0.820 | 0.431 | 1e-170 | |
| P54201 | 837 | Ubiquitin carboxyl-termin | yes | no | 0.875 | 0.849 | 0.413 | 1e-166 |
| >sp|Q8L6Y1|UBP14_ARATH Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana GN=UBP14 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1194 bits (3089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/759 (74%), Positives = 668/759 (88%), Gaps = 10/759 (1%)
Query: 4 MDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKT 63
M+LLRSNLSRV+IPEPT+RI+K ECC+SFDTPRSEGGLFVD+NSFLA+GKD+V WN+EKT
Sbjct: 1 MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60
Query: 64 GNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSY 123
GNPVYLHIKQTRK + PEDRP KKPTLLAIGV+GGFDNNE EY+E++SIVILP++V+L +
Sbjct: 61 GNPVYLHIKQTRKSI-PEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPF 119
Query: 124 PSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWK 183
PSVELPEKVR+AVD ++ A GAERKEQVAAWTA+KK S +A+ LQQI +G++IPPSGWK
Sbjct: 120 PSVELPEKVRIAVDTVVNAVGAERKEQVAAWTAEKKLISEHALTLQQIKSGIVIPPSGWK 179
Query: 184 CAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGA 243
C+KCDK +NLWLNLTDGMILCGR+NWDGTGGNNHAVEHYKET YPLAVKLGTIT+DLE A
Sbjct: 180 CSKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTITADLEAA 239
Query: 244 DVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDV 303
DV+SYPEDDSV+DPLLA+HLA FGIDFSS+QKTEMTTAERELDQNTNFDWNRIQESG+++
Sbjct: 240 DVYSYPEDDSVLDPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKEL 299
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNM 363
P+FGPGYTGLVNLGNSCYLAATMQ++FSTH+F +RY++ + LK AFE APADPT+DLNM
Sbjct: 300 VPVFGPGYTGLVNLGNSCYLAATMQIVFSTHSFISRYFSHQSLKMAFEMAPADPTLDLNM 359
Query: 364 QLTKLAHGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSMRQQ 423
QLTKL HGLLSGKYS+PA +KD ATT D +QEGIPPRMFK VIAASH EFSSMRQQ
Sbjct: 360 QLTKLGHGLLSGKYSMPATQKD-----ATTGDPRQEGIPPRMFKNVIAASHAEFSSMRQQ 414
Query: 424 DALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIPL 483
DAL+FFLH V +VER + P++DP++SFKFGIEE+I CPSGKV YN+R D ILSL IPL
Sbjct: 415 DALDFFLHLVGKVERASNTTPDLDPSRSFKFGIEEKILCPSGKVGYNKREDCILSLNIPL 474
Query: 484 DEATNKEELAAFQKLKMERISEGKDV-TNEEIVRPRVPLEACLSTFSAPEELPDFYSTAL 542
EATNK+EL AF K K + E D+ +++EIVRPRVPLEACL+ F++ E + D+YS+AL
Sbjct: 475 HEATNKDELEAFHKQKAGKGLEENDMRSSDEIVRPRVPLEACLANFASSEPIEDYYSSAL 534
Query: 543 KAKTTATKSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQPG 602
K TTA K+ GLTSFPDYLVLHMRKFVME GWVPKKLDVYIDVPD+IDISHMRSKGLQPG
Sbjct: 535 KGMTTAIKTTGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSKGLQPG 594
Query: 603 EELLPEGGPEDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSH 662
EELLP+G PE+ ++S +PVAN++IV+QLVSMGF+ LHC+KAA+NTSNAGVEEAMNWLLSH
Sbjct: 595 EELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSH 654
Query: 663 MDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPD 722
MDDPDID P+S +T + IDQS V+TLLSFGF+E+VAR ALKASGGDIEKATDW+FNNP+
Sbjct: 655 MDDPDIDAPISHQT--SDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNPN 712
Query: 723 ASTSSDMDAATSSTAQTPADAGLPDGGGSKFLKHILAYF 761
AS S ++++S AQTPA +GLPDGGG L I+++
Sbjct: 713 ASVSDMDVSSSNS-AQTPAQSGLPDGGGKYKLFGIVSHM 750
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2 |
| >sp|P56399|UBP5_MOUSE Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus GN=Usp5 PE=1 SV=1 | Back alignment and function description |
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| >sp|P45974|UBP5_HUMAN Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens GN=USP5 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5R407|UBP5_PONAB Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii GN=UBP5 PE=2 SV=1 | Back alignment and function description |
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| >sp|F1QFS9|UBP13_DANRE Ubiquitin carboxyl-terminal hydrolase 13 OS=Danio rerio GN=usp13 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q92995|UBP13_HUMAN Ubiquitin carboxyl-terminal hydrolase 13 OS=Homo sapiens GN=USP13 PE=1 SV=2 | Back alignment and function description |
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| >sp|E1BMF7|UBP13_BOVIN Ubiquitin carboxyl-terminal hydrolase 13 OS=Bos taurus GN=USP13 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q5BKP2|UBP13_MOUSE Ubiquitin carboxyl-terminal hydrolase 13 OS=Mus musculus GN=Usp13 PE=2 SV=1 | Back alignment and function description |
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| >sp|E1BY77|UBP13_CHICK Ubiquitin carboxyl-terminal hydrolase 13 OS=Gallus gallus GN=USP13 PE=3 SV=1 | Back alignment and function description |
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| >sp|P54201|UBPA_DICDI Ubiquitin carboxyl-terminal hydrolase A OS=Dictyostelium discoideum GN=ubpA PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | ||||||
| 224122870 | 807 | predicted protein [Populus trichocarpa] | 0.932 | 0.938 | 0.823 | 0.0 | |
| 302143104 | 808 | unnamed protein product [Vitis vinifera] | 0.929 | 0.934 | 0.807 | 0.0 | |
| 449458213 | 807 | PREDICTED: ubiquitin carboxyl-terminal h | 0.931 | 0.936 | 0.796 | 0.0 | |
| 359493906 | 794 | PREDICTED: ubiquitin carboxyl-terminal h | 0.913 | 0.934 | 0.801 | 0.0 | |
| 449476716 | 793 | PREDICTED: ubiquitin carboxyl-terminal h | 0.915 | 0.936 | 0.794 | 0.0 | |
| 255569643 | 791 | Ubiquitin carboxyl-terminal hydrolase, p | 0.913 | 0.938 | 0.799 | 0.0 | |
| 357452445 | 835 | Ubiquitin carboxyl-terminal hydrolase [M | 0.915 | 0.889 | 0.786 | 0.0 | |
| 224117294 | 809 | predicted protein [Populus trichocarpa] | 0.922 | 0.925 | 0.783 | 0.0 | |
| 356517211 | 794 | PREDICTED: ubiquitin carboxyl-terminal h | 0.916 | 0.937 | 0.770 | 0.0 | |
| 357452447 | 817 | Ubiquitin carboxyl-terminal hydrolase [M | 0.892 | 0.887 | 0.770 | 0.0 |
| >gi|224122870|ref|XP_002330384.1| predicted protein [Populus trichocarpa] gi|222871769|gb|EEF08900.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/760 (82%), Positives = 692/760 (91%), Gaps = 3/760 (0%)
Query: 4 MDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKT 63
MDLLRSNLSRVRIPEPTNRI+KQECCVSF+TPRSEGGLFVD+ +FLA+GKD+VGWN+EKT
Sbjct: 1 MDLLRSNLSRVRIPEPTNRIYKQECCVSFETPRSEGGLFVDMTTFLAFGKDYVGWNYEKT 60
Query: 64 GNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSY 123
GNPVYLHIKQTRK+V PEDRP KKPTLLAIGVEGGFDNNE E++E H+IVILP+YVTL +
Sbjct: 61 GNPVYLHIKQTRKVV-PEDRPLKKPTLLAIGVEGGFDNNEPEHEENHNIVILPDYVTLPF 119
Query: 124 PSVELPEKVRLAVDAILMAEGAERKEQVAAW-TADKKQTSAYAMNLQQIDNGVIIPPSGW 182
PSVELPEKVRLAVDAI+MAEGAERKEQ+AAW ADKKQ SAYAM+L QIDNGV+IPPS W
Sbjct: 120 PSVELPEKVRLAVDAIIMAEGAERKEQLAAWIAADKKQVSAYAMSLPQIDNGVVIPPSRW 179
Query: 183 KCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEG 242
KCAKCDK+DNLWLNLTDGMILCGR+NWDGTGGNNHA+EHYKET YPLAVKLGTIT+DLE
Sbjct: 180 KCAKCDKKDNLWLNLTDGMILCGRKNWDGTGGNNHAIEHYKETSYPLAVKLGTITADLEA 239
Query: 243 ADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQD 302
ADVFSYPEDDSVVDPLLAQHLAFFGIDFS+LQKTEMTTAERELDQNTN+DWNRIQESGQD
Sbjct: 240 ADVFSYPEDDSVVDPLLAQHLAFFGIDFSALQKTEMTTAERELDQNTNYDWNRIQESGQD 299
Query: 303 VEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLN 362
VEP+FGPGYTGLVNLGNSCY+AATMQV+FST +F +R+Y + LK AFE APADPTVDLN
Sbjct: 300 VEPIFGPGYTGLVNLGNSCYMAATMQVVFSTRSFNSRFYINQSLKMAFEMAPADPTVDLN 359
Query: 363 MQLTKLAHGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSMRQ 422
MQLTKLAHG+LSGKYSVPA E D ANA T+T KQEGIPPRMFKAVIAASHPEFSSMRQ
Sbjct: 360 MQLTKLAHGMLSGKYSVPALENDDKANAVTSTSNKQEGIPPRMFKAVIAASHPEFSSMRQ 419
Query: 423 QDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIP 482
QDALEFFLHF+DQVERV+ GKP +DP++SFKFGIEERISCPSGKV +NRRLDYILSL IP
Sbjct: 420 QDALEFFLHFLDQVERVNGGKPALDPSRSFKFGIEERISCPSGKVGFNRRLDYILSLNIP 479
Query: 483 LDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYSTAL 542
L EATNKEEL AF KLK E+ SEGKD++++EIVRPRVPLEACL+ FSAPEE+ D+YSTAL
Sbjct: 480 LHEATNKEELEAFGKLKAEKTSEGKDLSSDEIVRPRVPLEACLANFSAPEEIQDYYSTAL 539
Query: 543 KAKTTATKSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQPG 602
KAKTTA K+AGLTSFPDYLVLHMRKFV+E GWVPKKLDVYIDVPDIIDIS+MRSKGLQPG
Sbjct: 540 KAKTTALKTAGLTSFPDYLVLHMRKFVLEEGWVPKKLDVYIDVPDIIDISYMRSKGLQPG 599
Query: 603 EELLPEGGPEDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSH 662
EELLP+ PE EV+SN P+AN+DIVSQLVSMGFN+LHC+KAA+N+SNAGVEEAMNWLLSH
Sbjct: 600 EELLPDDVPEAEVESNMPLANEDIVSQLVSMGFNYLHCQKAAINSSNAGVEEAMNWLLSH 659
Query: 663 MDDPDIDMPLSQETQC-AAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
MDDPDID P+SQ +DQ KV+TLLSFGF EE+AR ALKASGGDIEKATDWIFNNP
Sbjct: 660 MDDPDIDAPVSQGAHGNEVVDQLKVDTLLSFGFQEEIARKALKASGGDIEKATDWIFNNP 719
Query: 722 DASTSSDMDAATSSTAQTPADAGLPDGGGSKFLKHILAYF 761
DAS SSDMD +TSS+ TP D LPDGGG L I+++
Sbjct: 720 DASVSSDMDTSTSSSKPTPDDTELPDGGGKYKLFGIVSHM 759
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143104|emb|CBI20399.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449458213|ref|XP_004146842.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359493906|ref|XP_002284309.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449476716|ref|XP_004154814.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255569643|ref|XP_002525787.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis] gi|223534937|gb|EEF36623.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|357452445|ref|XP_003596499.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355485547|gb|AES66750.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224117294|ref|XP_002317532.1| predicted protein [Populus trichocarpa] gi|222860597|gb|EEE98144.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356517211|ref|XP_003527282.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357452447|ref|XP_003596500.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355485548|gb|AES66751.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | ||||||
| TAIR|locus:2083440 | 797 | UBP14 "ubiquitin-specific prot | 0.921 | 0.938 | 0.688 | 1.4e-286 | |
| RGD|1308438 | 858 | Usp5 "ubiquitin specific pepti | 0.697 | 0.659 | 0.503 | 9.8e-172 | |
| MGI|MGI:1347343 | 858 | Usp5 "ubiquitin specific pepti | 0.697 | 0.659 | 0.503 | 2e-171 | |
| UNIPROTKB|F1N3P2 | 858 | USP5 "Ubiquitin carboxyl-termi | 0.697 | 0.659 | 0.5 | 1.4e-170 | |
| UNIPROTKB|F1P9P5 | 868 | USP5 "Ubiquitin carboxyl-termi | 0.868 | 0.812 | 0.465 | 1.5e-170 | |
| UNIPROTKB|P45974 | 858 | USP5 "Ubiquitin carboxyl-termi | 0.697 | 0.659 | 0.496 | 3e-170 | |
| UNIPROTKB|F1SLU6 | 859 | USP5 "Ubiquitin carboxyl-termi | 0.697 | 0.658 | 0.497 | 7.8e-170 | |
| UNIPROTKB|E1C8W4 | 833 | USP5 "Ubiquitin carboxyl-termi | 0.865 | 0.843 | 0.459 | 2e-168 | |
| UNIPROTKB|E1BMF7 | 863 | USP13 "Ubiquitin carboxyl-term | 0.809 | 0.761 | 0.416 | 1.5e-155 | |
| UNIPROTKB|Q92995 | 863 | USP13 "Ubiquitin carboxyl-term | 0.809 | 0.761 | 0.416 | 1.9e-155 |
| TAIR|locus:2083440 UBP14 "ubiquitin-specific protease 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2753 (974.2 bits), Expect = 1.4e-286, P = 1.4e-286
Identities = 522/758 (68%), Positives = 613/758 (80%)
Query: 4 MDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKT 63
M+LLRSNLSRV+IPEPT+RI+K ECC+SFDTPRSEGGLFVD+NSFLA+GKD+V WN+EKT
Sbjct: 1 MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60
Query: 64 GNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSY 123
GNPVYLHIKQTRK + PEDRP KKPTLLAIGV+GGFDNNE EY+E++SIVILP++V+L +
Sbjct: 61 GNPVYLHIKQTRKSI-PEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPF 119
Query: 124 PSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWK 183
PSVELPEKVR+AVD ++ A GAERKEQVAAWTA+KK S +A+ LQQI +G++IPPSGWK
Sbjct: 120 PSVELPEKVRIAVDTVVNAVGAERKEQVAAWTAEKKLISEHALTLQQIKSGIVIPPSGWK 179
Query: 184 CAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGA 243
C+KCDK +NLWLNLTDGMILCGR+NWDGTGGNNHAVEHYKET YPLAVKLGTIT+DLE A
Sbjct: 180 CSKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTITADLEAA 239
Query: 244 DVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDV 303
DV+SYPEDDSV+DPLLA+HLA FGIDFSS+QKTEMTTAERELDQNTNFDWNRIQESG+++
Sbjct: 240 DVYSYPEDDSVLDPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKEL 299
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNM 363
P+FGPGYTGLVNLGNSCYLAATMQ++FSTH+F +RY++ + LK AFE APADPT+DLNM
Sbjct: 300 VPVFGPGYTGLVNLGNSCYLAATMQIVFSTHSFISRYFSHQSLKMAFEMAPADPTLDLNM 359
Query: 364 QLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQ 423
QLTKL HGLLSGKYS+PA +K +QEGIPPRMFK VIAASH EFSSMRQQ
Sbjct: 360 QLTKLGHGLLSGKYSMPATQKDATTGDP-----RQEGIPPRMFKNVIAASHAEFSSMRQQ 414
Query: 424 DALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIPL 483
DAL+FFLH V +VER + P++DP++SFKFGIEE+I CPSGKV YN+R D ILSL IPL
Sbjct: 415 DALDFFLHLVGKVERASNTTPDLDPSRSFKFGIEEKILCPSGKVGYNKREDCILSLNIPL 474
Query: 484 DEATNKEELAAFQKLKMERISEGKDV-TNEEIVRPRVPLEACLSTFSAPEELPDFYXXXX 542
EATNK+EL AF K K + E D+ +++EIVRPRVPLEACL+ F++ E + D+Y
Sbjct: 475 HEATNKDELEAFHKQKAGKGLEENDMRSSDEIVRPRVPLEACLANFASSEPIEDYYSSAL 534
Query: 543 XXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMRSKXXXXX 602
FPDYLVLHMRKFVME GWVPKKL SHMRSK
Sbjct: 535 KGMTTAIKTTGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSKGLQPG 594
Query: 603 XXXXXXXXXXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSH 662
+ ++S +PVAN++IV+QLVSMGF+ LHC+KAA+NTSNAGVEEAMNWLLSH
Sbjct: 595 EELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSH 654
Query: 663 MDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPX 722
MDDPDID P+S +T + IDQS V+TLLSFGF+E+VAR ALKASGGDIEKATDW+FNNP
Sbjct: 655 MDDPDIDAPISHQT--SDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNPN 712
Query: 723 XXXXXXXXXXXXXXXQTPADAGLPDGGGSKFLKHILAY 760
QTPA +GLPDGGG L I+++
Sbjct: 713 ASVSDMDVSSSNSA-QTPAQSGLPDGGGKYKLFGIVSH 749
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| RGD|1308438 Usp5 "ubiquitin specific peptidase 5 (isopeptidase T)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1347343 Usp5 "ubiquitin specific peptidase 5 (isopeptidase T)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1N3P2 USP5 "Ubiquitin carboxyl-terminal hydrolase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P9P5 USP5 "Ubiquitin carboxyl-terminal hydrolase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P45974 USP5 "Ubiquitin carboxyl-terminal hydrolase 5" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SLU6 USP5 "Ubiquitin carboxyl-terminal hydrolase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C8W4 USP5 "Ubiquitin carboxyl-terminal hydrolase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BMF7 USP13 "Ubiquitin carboxyl-terminal hydrolase 13" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q92995 USP13 "Ubiquitin carboxyl-terminal hydrolase 13" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q11119 | UBP14_SCHPO | 3, ., 4, ., 1, 9, ., 1, 2 | 0.3406 | 0.8165 | 0.8554 | yes | no |
| P54201 | UBPA_DICDI | 3, ., 4, ., 1, 9, ., 1, 2 | 0.4130 | 0.8756 | 0.8494 | yes | no |
| Q8L6Y1 | UBP14_ARATH | 3, ., 4, ., 1, 9, ., 1, 2 | 0.7483 | 0.9224 | 0.9397 | yes | no |
| P56399 | UBP5_MOUSE | 3, ., 4, ., 1, 9, ., 1, 2 | 0.4723 | 0.9187 | 0.8694 | yes | no |
| P45974 | UBP5_HUMAN | 3, ., 4, ., 1, 9, ., 1, 2 | 0.4687 | 0.9187 | 0.8694 | yes | no |
| Q5R407 | UBP5_PONAB | 3, ., 4, ., 1, 9, ., 1, 2 | 0.4662 | 0.9187 | 0.8694 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.19 | 0.976 |
| 3rd Layer | 3.4.19.12 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | eugene3.01340046 | hypothetical protein (807 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 812 | |||
| cd02658 | 311 | cd02658, Peptidase_C19B, A subfamily of Peptidase | 1e-111 | |
| COG5207 | 749 | COG5207, UBP14, Isopeptidase T [Posttranslational | 1e-102 | |
| pfam00443 | 313 | pfam00443, UCH, Ubiquitin carboxyl-terminal hydrol | 5e-40 | |
| cd02257 | 255 | cd02257, Peptidase_C19, Peptidase C19 contains ubi | 4e-21 | |
| pfam02148 | 63 | pfam02148, zf-UBP, Zn-finger in ubiquitin-hydrolas | 8e-20 | |
| smart00290 | 50 | smart00290, ZnF_UBP, Ubiquitin Carboxyl-terminal H | 3e-16 | |
| cd02667 | 279 | cd02667, Peptidase_C19K, A subfamily of Peptidase | 1e-10 | |
| cd00194 | 38 | cd00194, UBA, Ubiquitin Associated domain | 4e-10 | |
| smart00165 | 37 | smart00165, UBA, Ubiquitin associated domain | 1e-08 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 1e-08 | |
| cd02659 | 334 | cd02659, peptidase_C19C, A subfamily of Peptidase | 2e-08 | |
| pfam00627 | 37 | pfam00627, UBA, UBA/TS-N domain | 4e-08 | |
| cd02674 | 230 | cd02674, Peptidase_C19R, A subfamily of peptidase | 8e-08 | |
| cd02660 | 328 | cd02660, Peptidase_C19D, A subfamily of Peptidase | 1e-07 | |
| COG5533 | 415 | COG5533, UBP5, Ubiquitin C-terminal hydrolase [Pos | 1e-07 | |
| cd02657 | 305 | cd02657, Peptidase_C19A, A subfamily of Peptidase | 2e-07 | |
| cd00194 | 38 | cd00194, UBA, Ubiquitin Associated domain | 3e-06 | |
| cd02661 | 304 | cd02661, Peptidase_C19E, A subfamily of Peptidase | 5e-06 | |
| pfam00627 | 37 | pfam00627, UBA, UBA/TS-N domain | 2e-04 | |
| cd02257 | 255 | cd02257, Peptidase_C19, Peptidase C19 contains ubi | 5e-04 | |
| smart00165 | 37 | smart00165, UBA, Ubiquitin associated domain | 0.001 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 0.003 | |
| cd02664 | 327 | cd02664, Peptidase_C19H, A subfamily of Peptidase | 0.003 |
| >gnl|CDD|239123 cd02658, Peptidase_C19B, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 340 bits (875), Expect = e-111
Identities = 138/292 (47%), Positives = 168/292 (57%), Gaps = 41/292 (14%)
Query: 313 GLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGL 372
GL NLGNSCYL + +QV+FS +F RY L+ F + DP DLN QL KLA GL
Sbjct: 1 GLRNLGNSCYLNSVLQVLFSIPSFQWRYDD---LENKFPSDVVDPANDLNCQLIKLADGL 57
Query: 373 LSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHF 432
LSG+YS PA K D Q GI P MFKA+I HPEFS+MRQQDALEF LH
Sbjct: 58 LSGRYSKPASLKS-------ENDPYQVGIKPSMFKALIGKGHPEFSTMRQQDALEFLLHL 110
Query: 433 VDQVERVHSGKPEVDPTKSFKFGIEERISCPS-GKVAYNRRLDYILSLGIPLDEATNKEE 491
+D+++R ++P FKF IE+R+ C S KV Y L ILSL +P DEAT KEE
Sbjct: 111 IDKLDRESFKNLGLNPNDLFKFMIEDRLECLSCKKVKYTSELSEILSLPVPKDEATEKEE 170
Query: 492 LAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYSTALKAKTTATKS 551
E+V VPLE CL + APE + DF ST K KTTATK+
Sbjct: 171 --------------------GELVYEPVPLEDCLKAYFAPETIEDFCST-CKEKTTATKT 209
Query: 552 AGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIID---------ISHM 594
G +FPDYLV++M++F + WVPKKLDV IDVP+ + ISH
Sbjct: 210 TGFKTFPDYLVINMKRFQLLENWVPKKLDVPIDVPEELGPGKYELIAFISHK 261
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 311 |
| >gnl|CDD|227532 COG5207, UBP14, Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|215922 pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
| >gnl|CDD|216903 pfam02148, zf-UBP, Zn-finger in ubiquitin-hydrolases and other protein | Back alignment and domain information |
|---|
| >gnl|CDD|197632 smart00290, ZnF_UBP, Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|239132 cd02667, Peptidase_C19K, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|238116 cd00194, UBA, Ubiquitin Associated domain | Back alignment and domain information |
|---|
| >gnl|CDD|197551 smart00165, UBA, Ubiquitin associated domain | Back alignment and domain information |
|---|
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239124 cd02659, peptidase_C19C, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|201355 pfam00627, UBA, UBA/TS-N domain | Back alignment and domain information |
|---|
| >gnl|CDD|239139 cd02674, Peptidase_C19R, A subfamily of peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239125 cd02660, Peptidase_C19D, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|227820 COG5533, UBP5, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239122 cd02657, Peptidase_C19A, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|238116 cd00194, UBA, Ubiquitin Associated domain | Back alignment and domain information |
|---|
| >gnl|CDD|239126 cd02661, Peptidase_C19E, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|201355 pfam00627, UBA, UBA/TS-N domain | Back alignment and domain information |
|---|
| >gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
| >gnl|CDD|197551 smart00165, UBA, Ubiquitin associated domain | Back alignment and domain information |
|---|
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239129 cd02664, Peptidase_C19H, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 812 | |||
| KOG0944 | 763 | consensus Ubiquitin-specific protease UBP14 [Postt | 100.0 | |
| COG5207 | 749 | UBP14 Isopeptidase T [Posttranslational modificati | 100.0 | |
| cd02669 | 440 | Peptidase_C19M A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02658 | 311 | Peptidase_C19B A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02660 | 328 | Peptidase_C19D A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02671 | 332 | Peptidase_C19O A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02663 | 300 | Peptidase_C19G A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02668 | 324 | Peptidase_C19L A subfamily of Peptidase C19. Pepti | 100.0 | |
| KOG1865 | 545 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 100.0 | |
| cd02657 | 305 | Peptidase_C19A A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02667 | 279 | Peptidase_C19K A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02664 | 327 | Peptidase_C19H A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02661 | 304 | Peptidase_C19E A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02659 | 334 | peptidase_C19C A subfamily of Peptidase C19. Pepti | 100.0 | |
| COG5560 | 823 | UBP12 Ubiquitin C-terminal hydrolase [Posttranslat | 100.0 | |
| KOG1873 | 877 | consensus Ubiquitin-specific protease [Posttransla | 100.0 | |
| COG5533 | 415 | UBP5 Ubiquitin C-terminal hydrolase [Posttranslati | 100.0 | |
| KOG1867 | 492 | consensus Ubiquitin-specific protease [Posttransla | 100.0 | |
| cd02662 | 240 | Peptidase_C19F A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02666 | 343 | Peptidase_C19J A subfamily of Peptidase C19. Pepti | 99.96 | |
| KOG1868 | 653 | consensus Ubiquitin C-terminal hydrolase [Posttran | 99.96 | |
| KOG2026 | 442 | consensus Spindle pole body protein - Sad1p [Cytos | 99.96 | |
| PF00443 | 269 | UCH: Ubiquitin carboxyl-terminal hydrolase; InterP | 99.95 | |
| cd02674 | 230 | Peptidase_C19R A subfamily of peptidase C19. Pepti | 99.95 | |
| cd02673 | 245 | Peptidase_C19Q A subfamily of Peptidase C19. Pepti | 99.94 | |
| cd02257 | 255 | Peptidase_C19 Peptidase C19 contains ubiquitinyl h | 99.94 | |
| KOG1866 | 944 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 99.93 | |
| COG5077 | 1089 | Ubiquitin carboxyl-terminal hydrolase [Posttransla | 99.92 | |
| KOG1863 | 1093 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 99.91 | |
| cd02665 | 228 | Peptidase_C19I A subfamily of Peptidase C19. Pepti | 99.9 | |
| KOG1870 | 842 | consensus Ubiquitin C-terminal hydrolase [Posttran | 99.88 | |
| KOG4598 | 1203 | consensus Putative ubiquitin-specific protease [Po | 99.88 | |
| PF13423 | 295 | UCH_1: Ubiquitin carboxyl-terminal hydrolase | 99.84 | |
| cd02672 | 268 | Peptidase_C19P A subfamily of Peptidase C19. Pepti | 99.84 | |
| KOG1871 | 420 | consensus Ubiquitin-specific protease [Posttransla | 99.75 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 99.7 | |
| PF02148 | 63 | zf-UBP: Zn-finger in ubiquitin-hydrolases and othe | 99.65 | |
| KOG1872 | 473 | consensus Ubiquitin-specific protease [Posttransla | 99.63 | |
| cd02670 | 241 | Peptidase_C19N A subfamily of Peptidase C19. Pepti | 99.61 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 99.56 | |
| KOG0944 | 763 | consensus Ubiquitin-specific protease UBP14 [Postt | 99.55 | |
| COG5207 | 749 | UBP14 Isopeptidase T [Posttranslational modificati | 99.33 | |
| KOG2561 | 568 | consensus Adaptor protein NUB1, contains UBA domai | 99.33 | |
| TIGR00601 | 378 | rad23 UV excision repair protein Rad23. All protei | 99.15 | |
| KOG0011 | 340 | consensus Nucleotide excision repair factor NEF2, | 99.1 | |
| smart00290 | 50 | ZnF_UBP Ubiquitin Carboxyl-terminal Hydrolase-like | 99.07 | |
| PF00627 | 37 | UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma | 98.86 | |
| KOG2561 | 568 | consensus Adaptor protein NUB1, contains UBA domai | 98.81 | |
| PF00627 | 37 | UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma | 98.76 | |
| cd00194 | 38 | UBA Ubiquitin Associated domain. The UBA domain is | 98.72 | |
| smart00165 | 37 | UBA Ubiquitin associated domain. Present in Rad23, | 98.71 | |
| smart00165 | 37 | UBA Ubiquitin associated domain. Present in Rad23, | 98.55 | |
| cd00194 | 38 | UBA Ubiquitin Associated domain. The UBA domain is | 98.53 | |
| KOG1275 | 1118 | consensus PAB-dependent poly(A) ribonuclease, subu | 98.13 | |
| TIGR00601 | 378 | rad23 UV excision repair protein Rad23. All protei | 97.44 | |
| smart00290 | 50 | ZnF_UBP Ubiquitin Carboxyl-terminal Hydrolase-like | 97.31 | |
| KOG0011 | 340 | consensus Nucleotide excision repair factor NEF2, | 96.63 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 96.49 | |
| KOG2689 | 290 | consensus Predicted ubiquitin regulatory protein [ | 95.96 | |
| PF14555 | 43 | UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A | 94.87 | |
| PF02148 | 63 | zf-UBP: Zn-finger in ubiquitin-hydrolases and othe | 94.56 | |
| PF02845 | 42 | CUE: CUE domain; InterPro: IPR003892 This domain m | 94.38 | |
| KOG2689 | 290 | consensus Predicted ubiquitin regulatory protein [ | 93.34 | |
| smart00546 | 43 | CUE Domain that may be involved in binding ubiquit | 92.42 | |
| PF09288 | 55 | UBA_3: Fungal ubiquitin-associated domain ; InterP | 89.47 | |
| KOG0418 | 200 | consensus Ubiquitin-protein ligase [Posttranslatio | 88.87 | |
| PRK12332 | 198 | tsf elongation factor Ts; Reviewed | 88.86 | |
| PF09288 | 55 | UBA_3: Fungal ubiquitin-associated domain ; InterP | 88.3 | |
| TIGR00116 | 290 | tsf translation elongation factor Ts. This protein | 88.07 | |
| PRK09377 | 290 | tsf elongation factor Ts; Provisional | 87.75 | |
| smart00546 | 43 | CUE Domain that may be involved in binding ubiquit | 86.71 | |
| PRK06369 | 115 | nac nascent polypeptide-associated complex protein | 86.53 | |
| PF05408 | 193 | Peptidase_C28: Foot-and-mouth virus L-proteinase; | 86.27 | |
| PF09416 | 152 | UPF1_Zn_bind: RNA helicase (UPF2 interacting domai | 86.07 | |
| CHL00098 | 200 | tsf elongation factor Ts | 86.04 | |
| KOG0418 | 200 | consensus Ubiquitin-protein ligase [Posttranslatio | 84.62 | |
| TIGR00264 | 116 | alpha-NAC-related protein. This hypothetical prote | 84.37 | |
| PF14555 | 43 | UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A | 80.65 |
| >KOG0944 consensus Ubiquitin-specific protease UBP14 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-173 Score=1423.28 Aligned_cols=709 Identities=46% Similarity=0.826 Sum_probs=646.4
Q ss_pred CchhhhhhhhhCcccCCCCCCcccccccccccccCCCCCCcEEecccccccCcchhhhhhhccCCcEEEEEEEEEecCCC
Q 003533 1 MNPMDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTGNPVYLHIKQTRKLVAP 80 (812)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~v~k~eC~~~fd~~~~~~gl~vcl~~f~~~~~~h~~~h~~~~~~~~~l~i~~~~~~~~~ 80 (812)
|| |+.+..|++.+++|.++++||||||+||||+|++++||||||+||+|||+.|+..|+.+|+|++||||+|++|++++
T Consensus 1 ~~-~~~~~~~~~~~~vp~~~~~i~kdeC~ycf~sp~~e~glyicl~~f~afg~~~v~~~f~~tg~~~yl~i~r~~k~k~~ 79 (763)
T KOG0944|consen 1 ED-MEALHSHMPTVVVPRASQVIYKDECAYCFDSPESEGGLYICLNCFLAFGREHVEEYFRKTGHSVYLHIARVKKIKEE 79 (763)
T ss_pred CC-ccchhhcCCceeecCCCCceehhhceeeccCCCCCCCEEeehhhhhhhhhHHHHHHHhhcCceEEEEeccccchhhc
Confidence 46 78889999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C---CCCCCCCceeeeeccCCCCCCccCceeEEEEEEecCCccccCCCCCCc-HHH--HHHHHHHHhhccHHHHHHHHhh
Q 003533 81 E---DRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSYPSVELP-EKV--RLAVDAILMAEGAERKEQVAAW 154 (812)
Q Consensus 81 ~---~~~~~~~~kl~i~~~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~~~~s~~~~~~~~~w 154 (812)
. .+|+.|+|||+|+++ +.+++.|.||++|+...+.+++..++ +.+ .+.+++++.|.++..++.+.+|
T Consensus 80 ~~~~~~p~~K~tkl~i~~d-------~e~~d~~~iv~~p~~~~~~i~n~~~~~~i~~~~e~i~a~~sa~~~~~k~~~~aW 152 (763)
T KOG0944|consen 80 GAEGAEPKRKITKLEIGED-------LECEDVYDIVVVPDDLEIAIKNIQLLPEIVSATEAIEAMLSAISPSRKDRVNAW 152 (763)
T ss_pred cCcCCCccccceeEEeccc-------cccceeEEEEEeccccccccCCccccHHHHHHHHHHHHHHhhcCcchhhhhhhh
Confidence 4 478899999999986 36888999999998888888775544 445 5678999999999999999999
Q ss_pred hhccCCCCcccccccccCCCccCCCCCCcccccCCCCCeEEEeeeCcccccCccCCCCCCCchhhhHhhhcCCceeEeec
Q 003533 155 TADKKQTSAYAMNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLG 234 (812)
Q Consensus 155 ~~~~~~~c~h~~~l~q~~~~~~~~~~~~~C~~C~~~~~lw~CL~Cg~~~Cgr~~~~g~~gn~Ha~~H~~~~~H~~~v~lg 234 (812)
++|++..|+|..+|.|++++..+++++|+|+.|++++|||+||+||+|||||.||||.||||||+.||++|+||+|||||
T Consensus 153 d~Evr~v~k~~~nl~q~dng~~~~~~gwkCs~CDL~~NLWlcLtcG~v~CGR~qfg~~GgNgHA~~HYr~tghPLaVKLg 232 (763)
T KOG0944|consen 153 DNEVRTVSKHANNLSQIDNGKRIPPSGWKCSKCDLTENLWLCLTCGSVGCGRKQFGGSGGNGHALSHYRETGHPLAVKLG 232 (763)
T ss_pred hhheeeccCCCCChhhcccCcccCCCcceecccCcccceEEEeccCceeecceeecCCCCCcchHHhhhhcCCceEEEec
Confidence 99998999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceEEeccCCCCCCchhHHHHHHhhcccccccchhhhhhhhhhhhcccccccccccccCCcccccCCCccccc
Q 003533 235 TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVEPLFGPGYTGL 314 (812)
Q Consensus 235 tit~~~~~~~vycy~cd~~v~dp~l~~~L~~~gI~~~~~~kteksl~el~ie~n~~~e~~~~~e~g~~l~p~~g~g~~GL 314 (812)
|||++ ++|||||.||++|.||+|++||+|||||+..|.||||++.|+++++|..|+|.+++|+|..++|++|||+|||
T Consensus 233 sIs~d--g~DvycY~cDd~v~dPnl~~hl~hfGId~~~m~kteksl~elel~~N~i~Ew~~~~esg~~l~p~~gpgytGl 310 (763)
T KOG0944|consen 233 SISPD--GADVYCYDCDDEVRDPNLESHLSHFGIDMAKMDKTEKSLVELELDQNRIWEWEALEESGAPLEPLFGPGYTGL 310 (763)
T ss_pred ccCCC--ccceeeecccccccCccHHHHHHhcCccHHHhccchhHHHHHHHHhhcccCceeeccCCCccccccCCCccce
Confidence 99999 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcchhhHHHHHhhcChhHHHHhccCCchhhhhccCCCCCCccHHHHHHHHHHHHhcCCCCCChhhhhhhhcccccC
Q 003533 315 VNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKDAAANAATTT 394 (812)
Q Consensus 315 ~NLGNTCYmNSVLQ~L~~ip~f~~~~l~~~~~~~~~~~~~~~p~~~l~~qL~kL~~~l~sg~ys~~~~~~~~~~~~~~~~ 394 (812)
+|||||||||||||+||++|.|..+|+.. .+++.+.+.+|.+||.|||.||+++|.+|+||+|..+.
T Consensus 311 ~NlGNSCYlnSVmQ~Lf~i~~fq~~~~~~---~~~f~~~~~~P~ndf~cQ~~Kl~~gm~sgkys~p~~~~---------- 377 (763)
T KOG0944|consen 311 INLGNSCYLNSVMQSLFSIPSFQRRYLEQ---ERIFNCYPKDPTNDFNCQLAKLLHGMLSGKYSKPLMDP---------- 377 (763)
T ss_pred eecCcchhHHHHHHHheecccHHHhhccc---cceeecCCCCcchhHHHHHHHHHHHhhcCcccCccCCc----------
Confidence 99999999999999999999999999875 56788888999999999999999999999999983311
Q ss_pred CCCCCCCCchhHHHHHHhhCCCCCcccccchHHHHHHHHHHHHHHhcCCCCCCCccceeeEEEEEEEe-CCCCeeeeecc
Q 003533 395 DTKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473 (812)
Q Consensus 395 ~~~~~~IsP~~f~~~i~~~~~~F~~~~QQDA~EFL~~LLd~L~~~~~~~~~~~i~~~F~g~l~~~i~C-~C~~vs~~~e~ 473 (812)
..+.+|+|.+||.+||+.||+|++.+||||+|||++||+.|++...... .+|+++|+|.+++|++| .|++|+|++++
T Consensus 378 -~~qngIsP~mFK~~igknHpeFst~~QQDA~EFllfLl~ki~~n~rs~~-~nptd~frF~ve~Rv~C~~c~kVrYs~~~ 455 (763)
T KOG0944|consen 378 -SNQNGISPLMFKALIGKNHPEFSTNRQQDAQEFLLFLLEKIRENSRSSL-PNPTDLFRFEVEDRVSCLGCRKVRYSYES 455 (763)
T ss_pred -cccCCcCHHHHHHHHcCCCccccchhhhhHHHHHHHHHHHHhhcccccC-CCHHHHHHhhhhhhhhhhccccccccchh
Confidence 1368999999999999999999999999999999999999999876432 78999999999999999 99999999999
Q ss_pred ceeEEeecCCcccccHHHHHHHHHHHHhhhccCCCCCcccccCCCCCHHHHHHhhcCCcccCcccccccCccccceEEEE
Q 003533 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYSTALKAKTTATKSAG 553 (812)
Q Consensus 474 ~~~LsL~Ip~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~sL~dcL~~f~~~E~l~~y~C~~C~~~~~a~K~~~ 553 (812)
.+.|.||||... .++..+++.+||++||.| .+++|+|++||.|..|+|+++
T Consensus 456 ~~~i~lpv~~~~----------------------------~v~~~v~~~~cleaff~p-q~~df~s~ac~~K~~a~kt~~ 506 (763)
T KOG0944|consen 456 EYLIQLPVPMTN----------------------------EVREKVPISACLEAFFEP-QVDDFWSTACGEKKGATKTTR 506 (763)
T ss_pred heeeEeeccccc----------------------------cccccCCHHHHHHHhcCC-cchhhhhHhhcCccccccccc
Confidence 999999998621 134558999999999999 666799999999999999999
Q ss_pred ecccCCceEEEeeeEEEcCCcceeccceeeecCCcccccccccCCCCCCCccCCCCCCCCcccCCCCcCCHHHHHHHHhC
Q 003533 554 LTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQPGEELLPEGGPEDEVQSNKPVANKDIVSQLVSM 633 (812)
Q Consensus 554 i~~lP~vLiIhLkRF~~~~~~~~~Ki~~~V~fP~~LDLs~y~~~g~~~gE~~lpe~~~~~~~~~~~~~~~~~~v~~L~~M 633 (812)
|++||+||+||++||.+. +|+++|+++.|++|+.|||+.|++.|+||||++||++.++. .++.+|+.+|.||++|
T Consensus 507 ~ksfP~yLiiqv~rf~~~-dw~pkKld~~iempe~ldls~~rs~g~~p~ee~lpde~~~~----~~~~~d~s~i~qL~~M 581 (763)
T KOG0944|consen 507 FKSFPDYLIIQVGRFTLQ-DWVPKKLDVSIEMPEELDLSSYRSKGLQPGEEALPDEAPET----SEFAADRSVISQLVEM 581 (763)
T ss_pred cccCCceEEEEeeEEEec-CceeeeeccceecchhhchhhhhhcCCCCcccccCCcCccc----CccchhHHHHHHHHHc
Confidence 999999999999999995 99999999999999999999999999999999999987653 4577999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCCCCCC--cccc---ccCCCCHHHHHHHHhcCCCHHHHHHHHHHhCC
Q 003533 634 GFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL--SQET---QCAAIDQSKVETLLSFGFSEEVARNALKASGG 708 (812)
Q Consensus 634 GF~~~~a~~AL~~t~n~~~e~A~~wl~~~~~d~~~~~p~--~~~~---~~~~~~~~~i~~L~~mGf~~~~a~~AL~~~~~ 708 (812)
|||+++|+|||++|||+++|+|||||++||+|||+++|+ |+.. .+.+++++.+.++++|||++.+|++||+++||
T Consensus 582 GFp~eac~rAly~tgN~~aEaA~NWl~~HMdDpd~~~p~vvp~~~~~a~~~~~~e~~v~si~smGf~~~qa~~aL~~~n~ 661 (763)
T KOG0944|consen 582 GFPEEACRRALYYTGNSGAEAASNWLMEHMDDPDIDDPFVVPGNSPKADAREVDEESVASIVSMGFSRNQAIKALKATNN 661 (763)
T ss_pred CCCHHHHHHHHhhhcCccHHHHHHHHHHhccCcccCCceecCCCCCccccCCCChhHheeeeeecCcHHHHHHHHHhcCc
Confidence 999999999999999999999999999999999999999 4422 23379999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCccccCCCCC----CCCCCCCCCCCCCceeEEEEEeecCCChhhHHH
Q 003533 709 DIEKATDWIFNNPDASTSSDMDAATSSTA----QTPADAGLPDGGGSKFLKHILAYFIPNLYMLSV 770 (812)
Q Consensus 709 ~~e~A~~wl~~~~dd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~y~L~a~I~H~G~s~~~a~~ 770 (812)
|+|||+||+|+|||+.-++ .+...++++ +....++ .||+|+|+|+|||||||+|++-.++
T Consensus 662 nveravDWif~h~d~~~ed-~~~~~s~~~~~~~~~~~~~~-~dg~~~Y~L~a~IsHmGts~~sGHY 725 (763)
T KOG0944|consen 662 NVERAVDWIFSHMDIPVED-AAEGESSSAIESESTPSGTG-KDGPGKYALFAFISHMGTSAHSGHY 725 (763)
T ss_pred cHHHHHHHHHhcccccccc-cCcCCCCCcchhhcCCcccC-CCCCcceeEEEEEecCCCCCCCcce
Confidence 9999999999999953332 211111111 1122233 8999999999999999999886543
|
|
| >COG5207 UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02669 Peptidase_C19M A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02658 Peptidase_C19B A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02660 Peptidase_C19D A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02671 Peptidase_C19O A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02663 Peptidase_C19G A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02668 Peptidase_C19L A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1865 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02657 Peptidase_C19A A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02667 Peptidase_C19K A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02664 Peptidase_C19H A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02661 Peptidase_C19E A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02659 peptidase_C19C A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >COG5560 UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1873 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG5533 UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1867 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02662 Peptidase_C19F A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02666 Peptidase_C19J A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1868 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2026 consensus Spindle pole body protein - Sad1p [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00443 UCH: Ubiquitin carboxyl-terminal hydrolase; InterPro: IPR001394 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd02674 Peptidase_C19R A subfamily of peptidase C19 | Back alignment and domain information |
|---|
| >cd02673 Peptidase_C19Q A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02257 Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
| >KOG1866 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG5077 Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1863 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02665 Peptidase_C19I A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1870 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4598 consensus Putative ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13423 UCH_1: Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
| >cd02672 Peptidase_C19P A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1871 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF02148 zf-UBP: Zn-finger in ubiquitin-hydrolases and other protein; InterPro: IPR001607 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1872 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02670 Peptidase_C19N A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0944 consensus Ubiquitin-specific protease UBP14 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG5207 UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2561 consensus Adaptor protein NUB1, contains UBA domain [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00601 rad23 UV excision repair protein Rad23 | Back alignment and domain information |
|---|
| >KOG0011 consensus Nucleotide excision repair factor NEF2, RAD23 component [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >smart00290 ZnF_UBP Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger | Back alignment and domain information |
|---|
| >PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases [] | Back alignment and domain information |
|---|
| >KOG2561 consensus Adaptor protein NUB1, contains UBA domain [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases [] | Back alignment and domain information |
|---|
| >cd00194 UBA Ubiquitin Associated domain | Back alignment and domain information |
|---|
| >smart00165 UBA Ubiquitin associated domain | Back alignment and domain information |
|---|
| >smart00165 UBA Ubiquitin associated domain | Back alignment and domain information |
|---|
| >cd00194 UBA Ubiquitin Associated domain | Back alignment and domain information |
|---|
| >KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR00601 rad23 UV excision repair protein Rad23 | Back alignment and domain information |
|---|
| >smart00290 ZnF_UBP Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger | Back alignment and domain information |
|---|
| >KOG0011 consensus Nucleotide excision repair factor NEF2, RAD23 component [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2689 consensus Predicted ubiquitin regulatory protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A | Back alignment and domain information |
|---|
| >PF02148 zf-UBP: Zn-finger in ubiquitin-hydrolases and other protein; InterPro: IPR001607 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs) | Back alignment and domain information |
|---|
| >KOG2689 consensus Predicted ubiquitin regulatory protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs) | Back alignment and domain information |
|---|
| >PF09288 UBA_3: Fungal ubiquitin-associated domain ; InterPro: IPR015368 This C-terminal domain is found in ubiquitin binding proteins, it adopts a structure consisting of a three alpha-helix bundle | Back alignment and domain information |
|---|
| >KOG0418 consensus Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK12332 tsf elongation factor Ts; Reviewed | Back alignment and domain information |
|---|
| >PF09288 UBA_3: Fungal ubiquitin-associated domain ; InterPro: IPR015368 This C-terminal domain is found in ubiquitin binding proteins, it adopts a structure consisting of a three alpha-helix bundle | Back alignment and domain information |
|---|
| >TIGR00116 tsf translation elongation factor Ts | Back alignment and domain information |
|---|
| >PRK09377 tsf elongation factor Ts; Provisional | Back alignment and domain information |
|---|
| >smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs) | Back alignment and domain information |
|---|
| >PRK06369 nac nascent polypeptide-associated complex protein; Reviewed | Back alignment and domain information |
|---|
| >PF05408 Peptidase_C28: Foot-and-mouth virus L-proteinase; InterPro: IPR008739 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF09416 UPF1_Zn_bind: RNA helicase (UPF2 interacting domain); InterPro: IPR018999 UPF1 (or regulator of nonsense transcripts 1 homologue) is an essential RNA helicase that detects mRNAs containing premature stop codons and triggers their degradation | Back alignment and domain information |
|---|
| >CHL00098 tsf elongation factor Ts | Back alignment and domain information |
|---|
| >KOG0418 consensus Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00264 alpha-NAC-related protein | Back alignment and domain information |
|---|
| >PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 812 | ||||
| 3ihp_A | 854 | Covalent Ubiquitin-Usp5 Complex Length = 854 | 1e-178 | ||
| 2g43_A | 129 | Structure Of The Znf Ubp Domain From Deubiquitinati | 4e-48 | ||
| 2l80_A | 116 | Solution Structure Of The Zinc Finger Domain Of Usp | 2e-39 | ||
| 1vek_A | 84 | Solution Structure Of Rsgi Ruh-011, A Uba Domain Fr | 2e-22 | ||
| 1wiv_A | 73 | Solution Structure Of Rsgi Ruh-023, A Uba Domain Fr | 8e-20 | ||
| 2lbc_A | 126 | Solution Structure Of Tandem Uba Of Usp13 Length = | 5e-11 | ||
| 2dag_A | 74 | Solution Structure Of The First Uba Domain In The H | 3e-09 | ||
| 1whc_A | 64 | Solution Structure Of Rsgi Ruh-027, A Uba Domain Fr | 1e-07 | ||
| 3n3k_A | 396 | The Catalytic Domain Of Usp8 In Complex With A Usp8 | 1e-06 | ||
| 2gfo_A | 396 | Structure Of The Catalytic Domain Of Human Ubiquiti | 3e-06 | ||
| 2y6e_A | 367 | Ubiquitin Specific Protease 4 Is Inhibited By Its U | 3e-05 | ||
| 2y5b_A | 370 | Structure Of Usp21 In Complex With Linear Diubiquit | 1e-04 |
| >pdb|3IHP|A Chain A, Covalent Ubiquitin-Usp5 Complex Length = 854 | Back alignment and structure |
|
| >pdb|2G43|A Chain A, Structure Of The Znf Ubp Domain From Deubiquitinating Enzyme Isopeptidase T (Isot) Length = 129 | Back alignment and structure |
| >pdb|2L80|A Chain A, Solution Structure Of The Zinc Finger Domain Of Usp13 Length = 116 | Back alignment and structure |
| >pdb|1VEK|A Chain A, Solution Structure Of Rsgi Ruh-011, A Uba Domain From Arabidopsis Cdna Length = 84 | Back alignment and structure |
| >pdb|1WIV|A Chain A, Solution Structure Of Rsgi Ruh-023, A Uba Domain From Arabidopsis Cdna Length = 73 | Back alignment and structure |
| >pdb|2LBC|A Chain A, Solution Structure Of Tandem Uba Of Usp13 Length = 126 | Back alignment and structure |
| >pdb|2DAG|A Chain A, Solution Structure Of The First Uba Domain In The Human Ubiquitin Specific Protease 5 (Isopeptidase 5) Length = 74 | Back alignment and structure |
| >pdb|1WHC|A Chain A, Solution Structure Of Rsgi Ruh-027, A Uba Domain From Mouse Cdna Length = 64 | Back alignment and structure |
| >pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8 Specific Inhibitor Length = 396 | Back alignment and structure |
| >pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin Carboxyl-terminal Hydrolase 8 Length = 396 | Back alignment and structure |
| >pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its Ubiquitin- Like Domain Length = 367 | Back alignment and structure |
| >pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear Diubiquitin-Aldehyde Length = 370 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} Length = 854 | Back alignment and structure |
|---|
Score = 701 bits (1809), Expect = 0.0
Identities = 369/781 (47%), Positives = 498/781 (63%), Gaps = 42/781 (5%)
Query: 3 PMDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEK 62
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F K
Sbjct: 24 SEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNK 83
Query: 63 TGNPVYLHIKQTRKLVAP------EDRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVI 114
TG VYLH+++TR+ D P KKPT LAIGVEGGFD +E E DE IVI
Sbjct: 84 TGQRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVI 143
Query: 115 LPEYVTLSYPSV-----ELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQ 169
LP+Y+ ++ + + ++V AV+A+L A+ A RK++V AW + +Q S +A +L+
Sbjct: 144 LPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFSLK 203
Query: 170 QIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPL 229
Q+DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEHY+ETGYPL
Sbjct: 204 QLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPL 263
Query: 230 AVKLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNT 289
AVKLGTIT +GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 264 AVKLGTITP--DGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQ 321
Query: 290 NFD-WNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKA 348
W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+
Sbjct: 322 RIGEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEK 379
Query: 349 AFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKA 408
F+ AP DPT D + Q+ KL HGLLSG+YS P E + Q+GI PRMFKA
Sbjct: 380 IFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERVPEQKE-VQDGIAPRMFKA 438
Query: 409 VIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCP-SGKV 467
+I HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV
Sbjct: 439 LIGKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKV 496
Query: 468 AYNRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLST 527
Y +R+DYI+ L +P+D A NKEEL +++ K + +E + + E+VR +VP +CL
Sbjct: 497 KYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQ--AEEEKMALPELVRAQVPFSSCLEA 554
Query: 528 FSAPEELPDFYSTALKAKTTATKSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPD 587
+ APE++ DF+STAL+AK+ A K+ SFPDYLV+ ++KF WVPKKLDV I++P+
Sbjct: 555 YGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPE 614
Query: 588 IIDISHMRSKGLQPGEELLPEGGPED--EVQSNKPVANKDIVSQLVSMGFNHLHCEKAAV 645
+DIS +R GLQPGEE LP+ P + P+ ++ ++ QLV MGF C KA
Sbjct: 615 ELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKAPMLDESVIIQLVEMGFPMDACRKAVY 674
Query: 646 NTSNAGVEEAMNWLLSHMDDPDIDMPL---------SQETQCAAIDQSKVETLLSFGFSE 696
T N+G E AMNW++SHMDDPD PL S + V T++S GFS
Sbjct: 675 YTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSR 734
Query: 697 EVARNALKASGGDIEKATDWIFNNPD-------ASTSSDMDAATSSTAQTPADAGLPDGG 749
+ A AL+A+ +E+A DWIF++ D S AA S + P + DG
Sbjct: 735 DQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGP 794
Query: 750 G 750
G
Sbjct: 795 G 795
|
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} Length = 854 | Back alignment and structure |
|---|
| >2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A Length = 129 | Back alignment and structure |
|---|
| >1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 84 | Back alignment and structure |
|---|
| >1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 84 | Back alignment and structure |
|---|
| >3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 3m99_A Length = 476 | Back alignment and structure |
|---|
| >2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 73 | Back alignment and structure |
|---|
| >1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 73 | Back alignment and structure |
|---|
| >2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83 | Back alignment and structure |
|---|
| >2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83 | Back alignment and structure |
|---|
| >3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A Length = 109 | Back alignment and structure |
|---|
| >1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74 | Back alignment and structure |
|---|
| >2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74 | Back alignment and structure |
|---|
| >2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A Length = 404 | Back alignment and structure |
|---|
| >2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
| >3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} PDB: 2y5b_A 3mtn_A Length = 355 | Back alignment and structure |
|---|
| >2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A Length = 396 | Back alignment and structure |
|---|
| >2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1 Length = 64 | Back alignment and structure |
|---|
| >2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63 | Back alignment and structure |
|---|
| >2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63 | Back alignment and structure |
|---|
| >1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9 Length = 415 | Back alignment and structure |
|---|
| >2ida_A Hypothetical protein; zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: g.44.1.5 Length = 102 | Back alignment and structure |
|---|
| >3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} PDB: 2hd5_A 2ibi_A Length = 348 | Back alignment and structure |
|---|
| >1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A Length = 353 | Back alignment and structure |
|---|
| >2i50_A Ubiquitin carboxyl-terminal hydrolase 16; alpha/beta zinc-finger, ring-finger, ZNF-UBP, metalloprotein, ubiquitin-binding protein, USP; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} Length = 522 | Back alignment and structure |
|---|
| >4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B* Length = 118 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1 Length = 83 | Back alignment and structure |
|---|
| >1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1 Length = 83 | Back alignment and structure |
|---|
| >1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 73 | Back alignment and structure |
|---|
| >1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1 Length = 73 | Back alignment and structure |
|---|
| >2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 47 | Back alignment and structure |
|---|
| >2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 47 | Back alignment and structure |
|---|
| >2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A Length = 108 | Back alignment and structure |
|---|
| >1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1 Length = 63 | Back alignment and structure |
|---|
| >1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 Length = 58 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 812 | ||||
| d2g45a1 | 113 | g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal h | 2e-49 | |
| d1veka_ | 84 | a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress | 1e-31 | |
| d1veka_ | 84 | a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress | 1e-09 | |
| d2idaa1 | 102 | g.44.1.5 (A:1-102) Hypothetical protein RPA1320 {R | 8e-25 | |
| d1wiva_ | 73 | a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress | 6e-24 | |
| d1wiva_ | 73 | a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress | 6e-08 | |
| d2uzga1 | 95 | g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hy | 9e-23 | |
| d2gfoa1 | 348 | d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal h | 8e-21 | |
| d2crna1 | 51 | a.5.2.1 (A:8-58) Suppressor of T-cell receptor sig | 1e-20 | |
| d2crna1 | 51 | a.5.2.1 (A:8-58) Suppressor of T-cell receptor sig | 2e-08 | |
| d1whca_ | 64 | a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus | 4e-19 | |
| d1whca_ | 64 | a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus | 5e-10 | |
| d1wjia_ | 63 | a.5.2.1 (A:) Tudor domain containing protein 3, TD | 3e-15 | |
| d1wjia_ | 63 | a.5.2.1 (A:) Tudor domain containing protein 3, TD | 6e-12 | |
| d2cpwa1 | 51 | a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 | 4e-15 | |
| d2cpwa1 | 51 | a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 | 7e-09 | |
| d2hd5a1 | 336 | d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hy | 4e-14 | |
| d1vjva_ | 397 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 4e-13 | |
| d2ayna1 | 383 | d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hy | 1e-10 | |
| d1wgna_ | 63 | a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 | 2e-10 | |
| d1wgna_ | 63 | a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 | 4e-09 | |
| d1nbfa_ | 347 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 1e-09 | |
| d1vg5a_ | 73 | a.5.2.1 (A:) Rhomboid family protein At3g58460 {Th | 1e-08 | |
| d1vg5a_ | 73 | a.5.2.1 (A:) Rhomboid family protein At3g58460 {Th | 2e-05 | |
| d1oqya1 | 41 | a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Hum | 6e-08 | |
| d1oqya1 | 41 | a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Hum | 1e-04 | |
| d1veja1 | 61 | a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculu | 3e-04 | |
| d2g3qa1 | 43 | a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL0 | 5e-04 | |
| d1vega_ | 83 | a.5.2.1 (A:) NEDD8 ultimate buster-1 (Nub1) {Mouse | 0.001 | |
| d2daha1 | 41 | a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) | 0.001 | |
| d2bwba1 | 44 | a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharom | 0.002 | |
| d2dnaa1 | 50 | a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {M | 0.002 |
| >d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 113 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: Zf-UBP domain: Ubiquitin carboxyl-terminal hydrolase 5, UBP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 2e-49
Identities = 80/111 (72%), Positives = 94/111 (84%), Gaps = 2/111 (1%)
Query: 159 KQTSAYAMNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHA 218
+Q S +A +L+Q+DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHA
Sbjct: 2 RQVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHA 61
Query: 219 VEHYKETGYPLAVKLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGID 269
VEHY+ETGYPLAVKLGTIT D GADV+SY EDD V+DP LA+HL+ FGID
Sbjct: 62 VEHYRETGYPLAVKLGTITPD--GADVYSYDEDDMVLDPSLAEHLSHFGID 110
|
| >d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 84 | Back information, alignment and structure |
|---|
| >d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 84 | Back information, alignment and structure |
|---|
| >d2idaa1 g.44.1.5 (A:1-102) Hypothetical protein RPA1320 {Rhodopseudomonas palustris [TaxId: 1076]} Length = 102 | Back information, alignment and structure |
|---|
| >d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 73 | Back information, alignment and structure |
|---|
| >d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 73 | Back information, alignment and structure |
|---|
| >d2uzga1 g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
| >d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 64 | Back information, alignment and structure |
|---|
| >d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 64 | Back information, alignment and structure |
|---|
| >d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 63 | Back information, alignment and structure |
|---|
| >d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 63 | Back information, alignment and structure |
|---|
| >d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 336 | Back information, alignment and structure |
|---|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 397 | Back information, alignment and structure |
|---|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
| >d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 63 | Back information, alignment and structure |
|---|
| >d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 63 | Back information, alignment and structure |
|---|
| >d1nbfa_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
| >d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 73 | Back information, alignment and structure |
|---|
| >d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 73 | Back information, alignment and structure |
|---|
| >d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} Length = 41 | Back information, alignment and structure |
|---|
| >d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} Length = 41 | Back information, alignment and structure |
|---|
| >d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} Length = 61 | Back information, alignment and structure |
|---|
| >d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]} Length = 43 | Back information, alignment and structure |
|---|
| >d1vega_ a.5.2.1 (A:) NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 83 | Back information, alignment and structure |
|---|
| >d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 41 | Back information, alignment and structure |
|---|
| >d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 44 | Back information, alignment and structure |
|---|
| >d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]} Length = 50 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 812 | |||
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d1nbfa_ | 347 | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAU | 100.0 | |
| d2gfoa1 | 348 | Ubiquitin carboxyl-terminal hydrolase 8 {Human (Ho | 100.0 | |
| d2hd5a1 | 336 | Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Hum | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d2g45a1 | 113 | Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Hum | 100.0 | |
| d2uzga1 | 95 | Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {H | 99.76 | |
| d1veka_ | 84 | Ubiquitin isopeptidase T {Thale cress (Arabidopsis | 99.74 | |
| d2idaa1 | 102 | Hypothetical protein RPA1320 {Rhodopseudomonas pal | 99.73 | |
| d1wiva_ | 73 | Ubiquitin isopeptidase T {Thale cress (Arabidopsis | 99.67 | |
| d1whca_ | 64 | UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [Ta | 99.42 | |
| d2crna1 | 51 | Suppressor of T-cell receptor signaling 2 (STS-2) | 99.4 | |
| d1whca_ | 64 | UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [Ta | 99.26 | |
| d1wjia_ | 63 | Tudor domain containing protein 3, TDRD3 {Human (H | 99.25 | |
| d1wjia_ | 63 | Tudor domain containing protein 3, TDRD3 {Human (H | 99.25 | |
| d1veka_ | 84 | Ubiquitin isopeptidase T {Thale cress (Arabidopsis | 99.22 | |
| d2cpwa1 | 51 | Cbl-interacting protein p70, STS1 {Human (Homo sap | 99.12 | |
| d2crna1 | 51 | Suppressor of T-cell receptor signaling 2 (STS-2) | 99.09 | |
| d1vg5a_ | 73 | Rhomboid family protein At3g58460 {Thale cress (Ar | 98.99 | |
| d2cpwa1 | 51 | Cbl-interacting protein p70, STS1 {Human (Homo sap | 98.98 | |
| d1wiva_ | 73 | Ubiquitin isopeptidase T {Thale cress (Arabidopsis | 98.97 | |
| d1wgna_ | 63 | Ubiquitin-associated protein 1, UBAP1 {Human (Homo | 98.87 | |
| d1vg5a_ | 73 | Rhomboid family protein At3g58460 {Thale cress (Ar | 98.77 | |
| d1oqya1 | 41 | DNA repair protein Hhr23a {Human (Homo sapiens) [T | 98.69 | |
| d1wgna_ | 63 | Ubiquitin-associated protein 1, UBAP1 {Human (Homo | 98.69 | |
| d1oqya1 | 41 | DNA repair protein Hhr23a {Human (Homo sapiens) [T | 98.33 | |
| d2g3qa1 | 43 | Endocytic protein Ede1, YBL047C {Saccharomyces cer | 98.05 | |
| d1vega_ | 83 | NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculu | 97.75 | |
| d2g3qa1 | 43 | Endocytic protein Ede1, YBL047C {Saccharomyces cer | 97.66 | |
| d2idaa1 | 102 | Hypothetical protein RPA1320 {Rhodopseudomonas pal | 97.63 | |
| d1veja1 | 61 | 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090] | 97.45 | |
| d2bwba1 | 44 | DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 97.08 | |
| d2dnaa1 | 50 | Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus | 97.05 | |
| d1oqya2 | 44 | DNA repair protein Hhr23a {Human (Homo sapiens) [T | 96.88 | |
| d1veja1 | 61 | 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090] | 96.7 | |
| d1vega_ | 83 | NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculu | 96.5 | |
| d2bwba1 | 44 | DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 96.37 | |
| d2dnaa1 | 50 | Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus | 96.33 | |
| d2g45a1 | 113 | Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Hum | 96.1 | |
| d2daha1 | 41 | Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | 96.08 | |
| d2daha1 | 41 | Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | 95.16 | |
| d2cosa1 | 41 | Serine/threonine protein kinase LATS2 {Mouse (Mus | 94.88 | |
| d1wj7a1 | 91 | Ubiquitin-associated protein 2-like Ubap2l {Mouse | 94.7 | |
| d1z96a1 | 38 | UBA-domain protein mud1 {Schizosaccharomyces pombe | 94.68 | |
| d1z96a1 | 38 | UBA-domain protein mud1 {Schizosaccharomyces pombe | 94.12 | |
| d1oqya2 | 44 | DNA repair protein Hhr23a {Human (Homo sapiens) [T | 93.66 | |
| d1efub3 | 54 | Elongation factor Ts (EF-Ts), N-terminal domain {E | 93.54 | |
| d2cosa1 | 41 | Serine/threonine protein kinase LATS2 {Mouse (Mus | 93.01 | |
| d2uzga1 | 95 | Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {H | 92.3 | |
| d3e46a1 | 42 | Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal | 92.22 | |
| d1xb2b1 | 56 | Elongation factor Ts (EF-Ts), N-terminal domain {C | 91.96 | |
| d1aipc1 | 52 | Elongation factor Ts (EF-Ts), N-terminal domain {T | 91.85 | |
| d1wgla_ | 59 | Toll-interacting protein {Human (Homo sapiens) [Ta | 91.05 | |
| d2dkla1 | 72 | Trinucleotide repeat containing 6c protein, TNRC6C | 88.79 | |
| d1aipc1 | 52 | Elongation factor Ts (EF-Ts), N-terminal domain {T | 86.9 | |
| d1xb2b1 | 56 | Elongation factor Ts (EF-Ts), N-terminal domain {C | 86.29 | |
| d2hd5a1 | 336 | Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Hum | 83.21 | |
| d1v92a_ | 46 | NSFL1 (p97 ATPase) cofactor p47, UBA-like domain { | 81.78 | |
| d2gfoa1 | 348 | Ubiquitin carboxyl-terminal hydrolase 8 {Human (Ho | 80.43 |
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=313.16 Aligned_cols=231 Identities=20% Similarity=0.274 Sum_probs=190.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 44544589940166999996147267887503784133310399999752799999999998329999970335543102
Q 003533 311 YTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKDAAANA 390 (812)
Q Consensus 311 ~~GL~NLGNTCYlNSVLQ~L~~ip~f~~~~~~~~~~~~~~~~~~~~p~~~l~~ql~kL~~~l~sg~ys~~~~~~~~~~~~ 390 (812)
|+||.|+|||||||||||+|+++|+|++++.... ..........+..++.++|++|+..|+..
T Consensus 4 P~GL~N~GNtCY~NSvLQ~L~~ip~~~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~l~~~--------------- 66 (383)
T d2ayna1 4 PCGLTNLGNTCYMNATVQCIRSVPELKDALKRYA--GALRASGEMASAQYITAALRDLFDSMDKT--------------- 66 (383)
T ss_dssp CCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCC--CCC------CHHHHHHHHHHHHHHHHHHH---------------
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH--HHCCCCCCCCCHHHHHHHHHHHHHHHHCC---------------
T ss_conf 9585889840699999999976699999998514--53157776452779999999999998658---------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCC------CCCCCCHHHHHHHHHHHHHHHHCCCC--------------------
Q ss_conf 6667988788781447999972088888------54556568899999999998834999--------------------
Q 003533 391 ATTTDTKQEGIPPRMFKAVIAASHPEFS------SMRQQDALEFFLHFVDQVERVHSGKP-------------------- 444 (812)
Q Consensus 391 ~~~~~~~~~~I~P~~fk~~i~~~~p~F~------~~~QQDA~EFl~~LLd~L~~~~~~~~-------------------- 444 (812)
...+.|..|+..+...++.|. ++.||||+||+.+||+.|+++.....
T Consensus 67 -------~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~QqDa~Ef~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (383)
T d2ayna1 67 -------SSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKK 139 (383)
T ss_dssp -------CSEECCHHHHHHHHHHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------
T ss_pred -------CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf -------9845779999999997376502555672245439999998788999998753203644211101211124667
Q ss_pred CCCCCCCEEEEEEEEEEE-CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 999746300588799990-7997642001533587415895335578999999877755206987784233589879999
Q 003533 445 EVDPTKSFKFGIEERISC-PSGKVAYNRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEA 523 (812)
Q Consensus 445 ~~~i~~lF~g~l~~~i~C-~C~~vs~~~e~~~~LsL~Ip~~~~~n~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~sL~d 523 (812)
.+.+.++|+|++.+++.| .|+..+++.+.+..++|++|.... ..++.+
T Consensus 140 ~s~i~~lF~g~~~~~~~c~~c~~~~~~~~~~~~l~L~~~~~~~-------------------------------~~~l~~ 188 (383)
T d2ayna1 140 KSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQE-------------------------------VKYLFT 188 (383)
T ss_dssp CCHHHHHTCEEEEEEEEESSSCCCCCBCCEEEESSEEEECSSS-------------------------------CCBHHH
T ss_pred CCEEEEEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCC-------------------------------CCHHHH
T ss_conf 8720540228999888835789655100223132321022101-------------------------------001345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCC-CCEECCCEEEECCCCCCCCCCCCCC
Q ss_conf 99741497425863355458655543887731147815998424788379-4200166243229854531111489
Q 003533 524 CLSTFSAPEELPDFYSTALKAKTTATKSAGLTSFPDYLVLHMRKFVMEAG-WVPKKLDVYIDVPDIIDISHMRSKG 598 (812)
Q Consensus 524 cL~~f~~~E~ie~y~C~~C~~~~~a~K~~~i~~lP~vLiIhLkRF~~~~~-~~~~Ki~~~V~fP~~LDLs~y~~~g 598 (812)
+|+.++.++... .|+.|+.++.+.++.+|.++|+||+||++||.++.. +...|+...|.||..|||.+|+..+
T Consensus 189 ~l~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~~K~~~~v~fp~~ldl~~~~~~~ 262 (383)
T d2ayna1 189 GLKLRLQEEITK--QSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPE 262 (383)
T ss_dssp HHHHTTEECCCC--EETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSCCBCCCCCBCCSEEECGGGBCHH
T ss_pred HHHHHHCCCCCC--CCCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCCCEEECCCEECCCCEEECHHHCCHH
T ss_conf 666520110012--45323764012023465023414534102201205676213358477468766443214603
|
| >d1nbfa_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2uzga1 g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2idaa1 g.44.1.5 (A:1-102) Hypothetical protein RPA1320 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
| >d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1vega_ a.5.2.1 (A:) NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2idaa1 g.44.1.5 (A:1-102) Hypothetical protein RPA1320 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
| >d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1oqya2 a.5.2.1 (A:317-360) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1vega_ a.5.2.1 (A:) NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cosa1 a.5.2.1 (A:8-48) Serine/threonine protein kinase LATS2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1z96a1 a.5.2.1 (A:295-332) UBA-domain protein mud1 {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1z96a1 a.5.2.1 (A:295-332) UBA-domain protein mud1 {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1oqya2 a.5.2.1 (A:317-360) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2cosa1 a.5.2.1 (A:8-48) Serine/threonine protein kinase LATS2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2uzga1 g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dkla1 a.5.2.1 (A:8-79) Trinucleotide repeat containing 6c protein, TNRC6C {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|