Citrus Sinensis ID: 003751

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------80
MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
ccccccccHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccEEEccccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEccccccccccccccHHHHHccccccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHccccccEEEEcccccccEEEEHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccEEEEEccEEEEEEEcccccEEEEEEccccccccccccccEEEccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEEEEccccccEEEEEEEEEccccccccEEEEcccccccccccEEEEEEccccccccccccccccccccccccccEEcccEEEccccccccccccEEEEEEEEEEEcccccccccEEEEEEEcccccccccc
ccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHcccEEEEcHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHcccccccccccccHccccccHHccccccccccHHHHHcccccccccccccccccEEEEEcccccccccccHHHHHHHHHHccccEEEEccccccccEEEEccHHHEEEHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccEEEEEEEcccccccccEEEEcccccHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHccccccEEEEEEEEEcEEEEEcHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccEEEEEccEEEEEEccccccEEEEEEccccccccccHcccEEEcccEEEEEEcHHcccccccccEEcccccEEEEEEEEEEEEEEEEEEcccccEEEEEEEEccccccccEEEEEEEcccccccccccHEEEHHHHHcccccccccHcHHHHcccccHEEHcccEEcccHHHccccccEEEEEEEEEEEccccccccEEEEEEEEcccccccccc
mvgvskgdKSEILELFLKIglddrtakntiannkvTANLTAVIHEAAVTDGCERRIGNLLYTVatkyptnalvhrpTLLLYIVSSKIKTPAQLEAAFSFFAstgsenfevdefeeacgvgvevssedIELTVNEVFEENKNTILELRYRTNVGDLFAHVrkrlpwadpkIVKQLIDARMYELLGERTAADIEKLSKKKEKkekkekpekdedkkfandapvqlpeedlfpisnfpppeenykqvhteipfsdgsvliccnTKEVLDKHlevtggnvltrfppepngylhighakAMFVDFglakerggycylryddtnpeaekKEYIDHIEEIVQWmgwepfkityTSDYFQELYELAVELIRRGhayvdhqtpEEIKEYREKKmnspwrdrpiaESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRikftphphagdkwciypsydyahcIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNkyvdgwddpclmtlaglrrrgvtstSINAFVQGigisrsdslIRLDRLEYHIREELnktaprtmvVLNPLKVVITNMesgtimhldakrwpdaqaddasafykvpfsnvvyiehsdfrmkdskdyyglapgksvLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkpkgvlhwvaepspgvnplRVEVRLFEKlfnsenpaelddwlsdlnpdskvvipeayaepslhsaavgdrfqferlgyfavdkdstpeklvfnrtvtlkdsfpkggk
mvgvskgdkseILELFLKiglddrtakntiannkvtanlTAVIHEAAVTDGCERRIGNLLYTVATkyptnalvhRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHvrkrlpwadpkIVKQLIDARMYELLGertaadieklskkkekkekkekpekdedkkfandapvqlpeeDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHayvdhqtpeeikeyrekkmnspwrdrpIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTnkyvdgwddPCLMTLAGLRRRGVTSTSinafvqgigisrsdsliRLDRLEYHIReelnktaprtmvvLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkpKGVLHWvaepspgvnpLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFavdkdstpeklvfnrtvtlkdsfpkggk
MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIeklskkkekkekkekpekdedkkFANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
***********ILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGE*********************************************************QVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDH*****************************************************DNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD*******KGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTV***********
**************LFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGE*******************************************************************GSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTP*****************RPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD**P****
********KSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEKLS*******************FANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
********KSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTA*********************************QLPEEDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD*******
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MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLxxxxxxxxxxxxxxxxxxxxxEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query798 2.2.26 [Sep-21-2011]
P52780794 Glutamine--tRNA ligase OS N/A no 0.982 0.987 0.784 0.0
P14325779 Probable glutamine--tRNA yes no 0.953 0.976 0.491 0.0
Q9Y105778 Probable glutamine--tRNA yes no 0.942 0.966 0.422 1e-173
O62431786 Probable glutamine--tRNA yes no 0.943 0.958 0.424 1e-172
Q3MHH4775 Glutamine--tRNA ligase OS yes no 0.939 0.967 0.433 1e-170
P47897775 Glutamine--tRNA ligase OS yes no 0.941 0.969 0.436 1e-169
Q9Y7Y8811 Probable glutamine--tRNA yes no 0.951 0.935 0.408 1e-156
P13188809 Glutamine--tRNA ligase OS yes no 0.948 0.935 0.383 1e-147
B5YQM4554 Glutamine--tRNA ligase OS yes no 0.657 0.947 0.476 1e-137
Q8X9H8554 Glutamine--tRNA ligase OS N/A no 0.657 0.947 0.476 1e-137
>sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase OS=Lupinus luteus PE=2 SV=2 Back     alignment and function desciption
 Score = 1302 bits (3370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/798 (78%), Positives = 705/798 (88%), Gaps = 14/798 (1%)

Query: 5   SKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVA 64
           +  DK + LELFLKIGLD+RTAKNT+ANNKVT NLT+VI++A VTDGC R +GNLLYTVA
Sbjct: 7   TSSDKEKSLELFLKIGLDERTAKNTVANNKVTTNLTSVINDAGVTDGCSRTVGNLLYTVA 66

Query: 65  TKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVS 124
           TKYP NAL HRPTLL YIV+SK+KT AQL+AA SF ++TGSEN ++++FEEACGVGVEVS
Sbjct: 67  TKYPANALPHRPTLLQYIVNSKVKTTAQLDAALSFLSATGSENLDLNKFEEACGVGVEVS 126

Query: 125 SEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLG 184
           +EDI+  V+EV EENK TILELRYR NVG+L  HVRKRLPWAD K+VKQL+DA++YE+LG
Sbjct: 127 TEDIKHAVDEVVEENKATILELRYRVNVGELLGHVRKRLPWADAKVVKQLVDAKLYEILG 186

Query: 185 ERTAAD---IEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENY 241
           +RTAAD    +K  +K  K E K  P    +K           EEDL P   FP PE+N+
Sbjct: 187 DRTAADNEKPKKKKEKPAKVEDKAAPVATSEKPL---------EEDLNPYLIFPNPEDNF 237

Query: 242 KQVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFG 301
           K VHTE+PFSDG++L CCNTK +L+KHL+ TGG VLTRFPPEPNGYLHIGHAKAMFVDFG
Sbjct: 238 K-VHTEVPFSDGNILRCCNTKALLEKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFVDFG 296

Query: 302 LAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVEL 361
           LAK+R G CYLR+DDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTS+YFQELYE AVEL
Sbjct: 297 LAKDRNGGCYLRFDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSNYFQELYEFAVEL 356

Query: 362 IRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQD 421
           IRRGHAYVDHQT +EIKEYREKK+NSPWRDRPI+ESLKLFEDMR G IEEGKATLRMKQD
Sbjct: 357 IRRGHAYVDHQTADEIKEYREKKLNSPWRDRPISESLKLFEDMRRGFIEEGKATLRMKQD 416

Query: 422 MQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRR 481
           MQ+DN+NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIEN+THSLCTLEFETRR
Sbjct: 417 MQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENVTHSLCTLEFETRR 476

Query: 482 ASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRR 541
           ASY+WLLHALG+YQPYVWEYSRLNVSNTVMSKRKLN LVT K+VDGWDDP LMTLAGLRR
Sbjct: 477 ASYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRR 536

Query: 542 RGVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNME 600
           RG+T T+INAFV+G+GI+RSD +LI ++RLEYH+REELNKTAPR MVVL+PLKVVITN+E
Sbjct: 537 RGMTPTAINAFVRGMGITRSDGTLISVERLEYHVREELNKTAPRAMVVLHPLKVVITNLE 596

Query: 601 SGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY 660
           + + + +DAK+WPDAQADDASAFYK+PFSNVVYIE SDFRM+DSKDYYGLAPGKSV+LRY
Sbjct: 597 AKSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRY 656

Query: 661 AFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKL 720
           AFPIKCTEVIL+DD ETIL IRAEYDPSKKTKPKGVLHWV++PSPGV+PL+VEVRLFE+L
Sbjct: 657 AFPIKCTEVILADDNETILEIRAEYDPSKKTKPKGVLHWVSQPSPGVDPLKVEVRLFERL 716

Query: 721 FNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEK 780
           F SENPAELD+WL DLNP SKV I  AY    L  A +GDRFQFERLGYFAVD+DSTPEK
Sbjct: 717 FLSENPAELDNWLGDLNPHSKVEISNAYGVSLLKDAKLGDRFQFERLGYFAVDQDSTPEK 776

Query: 781 LVFNRTVTLKDSFPKGGK 798
           LVFNRTVTLKDS+ KGGK
Sbjct: 777 LVFNRTVTLKDSYGKGGK 794

Lupinus luteus (taxid: 3873)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS PE=2 SV=2 Back     alignment and function description
>sp|Q9Y105|SYQ_DROME Probable glutamine--tRNA ligase OS=Drosophila melanogaster GN=Aats-gln PE=1 SV=1 Back     alignment and function description
>sp|O62431|SYQ_CAEEL Probable glutamine--tRNA ligase OS=Caenorhabditis elegans GN=ers-1 PE=2 SV=1 Back     alignment and function description
>sp|Q3MHH4|SYQ_BOVIN Glutamine--tRNA ligase OS=Bos taurus GN=QARS PE=2 SV=1 Back     alignment and function description
>sp|P47897|SYQ_HUMAN Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=1 SV=1 Back     alignment and function description
>sp|Q9Y7Y8|SYQ_SCHPO Probable glutamine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qrs1 PE=3 SV=1 Back     alignment and function description
>sp|P13188|SYQ_YEAST Glutamine--tRNA ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLN4 PE=1 SV=2 Back     alignment and function description
>sp|B5YQM4|SYQ_ECO5E Glutamine--tRNA ligase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|Q8X9H8|SYQ_ECO57 Glutamine--tRNA ligase OS=Escherichia coli O157:H7 GN=glnS PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query798
255572104793 glutaminyl-tRNA synthetase, putative [Ri 0.976 0.982 0.834 0.0
356536302794 PREDICTED: glutaminyl-tRNA synthetase-li 0.984 0.989 0.800 0.0
225453336790 PREDICTED: glutaminyl-tRNA synthetase [V 0.977 0.987 0.831 0.0
225424021791 PREDICTED: glutaminyl-tRNA synthetase is 0.986 0.994 0.804 0.0
224101753786 predicted protein [Populus trichocarpa] 0.968 0.983 0.819 0.0
356536304801 PREDICTED: glutaminyl-tRNA synthetase-li 0.984 0.981 0.785 0.0
449462224794 PREDICTED: glutamine--tRNA ligase-like [ 0.977 0.982 0.804 0.0
449515581794 PREDICTED: LOW QUALITY PROTEIN: glutamin 0.977 0.982 0.804 0.0
3915866794 RecName: Full=Glutamine--tRNA ligase; Al 0.982 0.987 0.784 0.0
359472944802 PREDICTED: glutaminyl-tRNA synthetase is 0.986 0.981 0.783 0.0
>gi|255572104|ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] gi|223533627|gb|EEF35364.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1367 bits (3538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/787 (83%), Positives = 720/787 (91%), Gaps = 8/787 (1%)

Query: 13  LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNAL 72
           LELFLKIGLD+RTAKNTIANNKVT NLT VIHEA V +GC R +GNLLYTVATKYPTNAL
Sbjct: 14  LELFLKIGLDERTAKNTIANNKVTNNLTTVIHEAGVNEGCSRTVGNLLYTVATKYPTNAL 73

Query: 73  VHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 132
           VHRP LL YIVSSKIKT AQLEAAFSF ++T SE+F++++FEEACGVGVEVS++DIE   
Sbjct: 74  VHRPALLEYIVSSKIKTSAQLEAAFSFLSNTASESFKLNDFEEACGVGVEVSADDIEKAA 133

Query: 133 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 192
           NEVFE+NK +ILELRYRTNVGDLF HVR RLPWADPKIVKQLIDA+++ELLGERTAAD E
Sbjct: 134 NEVFEQNKVSILELRYRTNVGDLFGHVRNRLPWADPKIVKQLIDAKLFELLGERTAADNE 193

Query: 193 KLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSD 252
           K SK     +KKEKP K ++KK A D PVQ  EEDL P   FP P+EN+K VHTEI FSD
Sbjct: 194 KPSK-----QKKEKPAKVQEKKVA-DCPVQPSEEDLNPFLIFPNPDENFK-VHTEILFSD 246

Query: 253 GSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYL 312
            S+L CCNTKE+LDKHL+ TGG V TRFPPEPNGYLHIGHAKAMFV FGLAKERGG CYL
Sbjct: 247 KSILRCCNTKEMLDKHLKETGGKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKERGGCCYL 306

Query: 313 RYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQ 372
           RYDDTNPEAEK+EYIDHIEEIV+WMGW+PFKITYTSDYFQ+LY+LAVELIRRGHAYVDHQ
Sbjct: 307 RYDDTNPEAEKREYIDHIEEIVEWMGWKPFKITYTSDYFQDLYDLAVELIRRGHAYVDHQ 366

Query: 373 TPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDL 432
           TP+EIKEYREKKMNSPWRDRPIAESLKLF++MR G IEEGKATLRMKQDMQ+DNFNMYDL
Sbjct: 367 TPDEIKEYREKKMNSPWRDRPIAESLKLFDEMRQGMIEEGKATLRMKQDMQSDNFNMYDL 426

Query: 433 IAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALG 492
           IAYRIKFTPHPH+GDKWCIYPSYDYAHCIVDS+ENITHSLCTLEFETRRASY+WLLHALG
Sbjct: 427 IAYRIKFTPHPHSGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLHALG 486

Query: 493 LYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAF 552
           +YQPYVWEYSRLNV+NTVMSKRKLNFLVT  YVDGWDDP LMTLAGLRRRGVT+T+INAF
Sbjct: 487 VYQPYVWEYSRLNVANTVMSKRKLNFLVTKNYVDGWDDPRLMTLAGLRRRGVTATAINAF 546

Query: 553 VQGIGISRSDS-LIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKR 611
           V+GIGI+RSDS LIRLDRLE+HIREELN+TAPRTMVVL+PLKVVITN+E G+IM L+AK+
Sbjct: 547 VRGIGITRSDSTLIRLDRLEHHIREELNRTAPRTMVVLHPLKVVITNLEPGSIMDLEAKK 606

Query: 612 WPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVIL 671
           WPDAQ DDASAFYKVPFSNVVYIE+SDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEV+L
Sbjct: 607 WPDAQTDDASAFYKVPFSNVVYIENSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVVL 666

Query: 672 SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDD 731
           +DD ETI+ IRAEYDPSKKTKPKGVLHWVAE SPGV+PL+VEVRLFEKLFNSENPAELDD
Sbjct: 667 ADDNETIIEIRAEYDPSKKTKPKGVLHWVAESSPGVDPLKVEVRLFEKLFNSENPAELDD 726

Query: 732 WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD 791
           WL+DLNP SKVV+  AYA P L +A +G+ FQFERLGYF VDKDSTPEKLVFNRTVTL+D
Sbjct: 727 WLADLNPQSKVVMSSAYAVPLLKNATIGESFQFERLGYFTVDKDSTPEKLVFNRTVTLRD 786

Query: 792 SFPKGGK 798
           S+ KGGK
Sbjct: 787 SYGKGGK 793

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356536302|ref|XP_003536678.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|225453336|ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis vinifera] gi|297734636|emb|CBI16687.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225424021|ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isoform 1 [Vitis vinifera] gi|297737799|emb|CBI27000.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101753|ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|222852227|gb|EEE89774.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356536304|ref|XP_003536679.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|449462224|ref|XP_004148841.1| PREDICTED: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515581|ref|XP_004164827.1| PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|3915866|sp|P52780.2|SYQ_LUPLU RecName: Full=Glutamine--tRNA ligase; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS gi|2995455|emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] Back     alignment and taxonomy information
>gi|359472944|ref|XP_003631220.1| PREDICTED: glutaminyl-tRNA synthetase isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query798
DICTYBASE|DDB_G0289481779 glnS "glutamine-tRNA ligase" [ 0.958 0.982 0.483 4.8e-197
ZFIN|ZDB-GENE-040426-1011797 qars "glutaminyl-tRNA syntheta 0.949 0.951 0.458 1e-171
WB|WBGene00001336786 qars-1 [Caenorhabditis elegans 0.949 0.964 0.421 6.1e-158
FB|FBgn0027090778 Aats-gln "Glutaminyl-tRNA synt 0.949 0.974 0.415 5.5e-157
UNIPROTKB|E2QRQ8775 QARS "Uncharacterized protein" 0.942 0.970 0.427 1.3e-155
UNIPROTKB|Q3MHH4775 QARS "Glutamine--tRNA ligase" 0.942 0.970 0.427 3.1e-154
RGD|1359448775 Qars "glutaminyl-tRNA syntheta 0.942 0.970 0.428 1.1e-153
UNIPROTKB|P47897775 QARS "Glutamine--tRNA ligase" 0.941 0.969 0.428 4.5e-153
POMBASE|SPBC342.02811 qrs1 "cytoplasmic glutaminyl-t 0.645 0.635 0.455 4.3e-151
UNIPROTKB|F1MTC2774 QARS "Glutamine--tRNA ligase" 0.941 0.970 0.420 1.9e-147
DICTYBASE|DDB_G0289481 glnS "glutamine-tRNA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 1908 (676.7 bits), Expect = 4.8e-197, P = 4.8e-197
 Identities = 382/790 (48%), Positives = 516/790 (65%)

Query:     8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKY 67
             +K E++ LF +IGLD   AK T  N  +++NL  +I EA    GCE+ +G LLYT+ATKY
Sbjct:     8 NKDELVTLFSQIGLDSSKAKETTNNATLSSNLQEIIKEAGAESGCEKSVGLLLYTLATKY 67

Query:    68 PTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSED 127
             P NA+ HR TL+ YI + K      L+A   +   T +E   V EFE++CGVGV ++ E 
Sbjct:    68 PANAMKHRATLVDYIANKKSVNSINLQACLDYLRRTANEELNVAEFEQSCGVGVVITREQ 127

Query:   128 IELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERT 187
             +   V++   +NK+ +LE RY+ N+G +   ++  L WA+ K +K+ +DA +  LLG +T
Sbjct:   128 VAQAVSDYINKNKSDLLEKRYQFNIGGILMEIKNSLKWANAKDIKEEVDAAILSLLGPKT 187

Query:   188 AADIXXXXXXXXXXXXXXXXXXXXXXXFANDAPVQLPEEDLFPISNFPPPEENYKQVHTE 247
              AD                           D    +P E         P +E       E
Sbjct:   188 DADKAPPAKPVKPTTPTAVATTTAATTTTGDLSPIIPAE-------LKPAKE-------E 233

Query:   248 IPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERG 307
             I F D S  I  NT ++L  HL+ TGG ++TRFPPEPNGYLHIGHAKAM ++FG AK+ G
Sbjct:   234 IKFPDPSDNIQ-NTPKLLADHLKTTGGKIVTRFPPEPNGYLHIGHAKAMHLNFGYAKKNG 292

Query:   308 GYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHA 367
             G CYLR+DDTNPE E +EYID I + V+W+G EP +ITY+S  F  LYE+A ELIRRG+A
Sbjct:   293 GKCYLRFDDTNPEKENQEYIDSIIDSVKWLGHEPCEITYSSSQFDTLYEMANELIRRGYA 352

Query:   368 YVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNF 427
             YV HQT  EI E REK  +SP+R+R + E+LKLFEDMR G+ EEGKA LRMK DM++ N 
Sbjct:   353 YVCHQTASEISEGREKMTDSPYRNRTVEENLKLFEDMRLGKFEEGKAILRMKGDMKHPNP 412

Query:   428 NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWL 487
              M DLIAYRIK+  HP +GDKWCIYPSYDY HC+VDSIENITHSLCTLEFE RR +Y WL
Sbjct:   413 CMRDLIAYRIKYHHHPMSGDKWCIYPSYDYTHCLVDSIENITHSLCTLEFEIRRLTYNWL 472

Query:   488 LHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTST 547
             +  LGLY+P VWEY+RLN+++TV+SKRK+  LV NK V+GWDDP L TL   RR+G T  
Sbjct:   473 IDVLGLYRPVVWEYARLNLTHTVLSKRKIITLVQNKIVNGWDDPRLSTLNAFRRKGYTPE 532

Query:   548 SINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMH 606
             +IN     IG++R++ + I  + LE   R++L+  A R M V +P+KVVITN        
Sbjct:   533 AINLLCDTIGVTRTNGTTISYELLELCCRQDLDGKATRAMAVFDPIKVVITNYPEDKSEE 592

Query:   607 LDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKC 666
             ++A   P+  +      +K+ FS +VYIE SDFRM+D+KD++GLAPGK +LL+YA+ IKC
Sbjct:   593 INA---PNIPSKPEKGTHKIDFSRIVYIERSDFRMEDNKDFFGLAPGKEILLKYAYNIKC 649

Query:   667 TEVIL-SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 725
              +VI  +D K T LH+   YD    +K    +HWV+  + G  P++ EVRL+E LF    
Sbjct:   650 EKVIQDADGKVTELHVT--YDKDNSSKKLKTIHWVSSVA-GTEPMKAEVRLYEHLFKDSE 706

Query:   726 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNR 785
                 DDWL+++NP+S  +IP A+ + ++ ++   DR+QFER+GYF VDKD+T +K+VFNR
Sbjct:   707 IG--DDWLNNINPNSLRIIPNAFIDKTVLASKEYDRYQFERVGYFVVDKDTTSDKMVFNR 764

Query:   786 TVTLKDSFPK 795
             TV+LK++  K
Sbjct:   765 TVSLKENKEK 774
GO:0043039 "tRNA aminoacylation" evidence=IEA
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0006425 "glutaminyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006412 "translation" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0004819 "glutamine-tRNA ligase activity" evidence=IEA;ISS
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0016874 "ligase activity" evidence=IEA
ZFIN|ZDB-GENE-040426-1011 qars "glutaminyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00001336 qars-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0027090 Aats-gln "Glutaminyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRQ8 QARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MHH4 QARS "Glutamine--tRNA ligase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1359448 Qars "glutaminyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P47897 QARS "Glutamine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
POMBASE|SPBC342.02 qrs1 "cytoplasmic glutaminyl-tRNA ligase Qrs1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|F1MTC2 QARS "Glutamine--tRNA ligase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P47897SYQ_HUMAN6, ., 1, ., 1, ., 1, 80.43680.94110.9690yesno
Q9Y105SYQ_DROME6, ., 1, ., 1, ., 1, 80.42230.94230.9665yesno
P13188SYQ_YEAST6, ., 1, ., 1, ., 1, 80.38340.94860.9357yesno
Q3MHH4SYQ_BOVIN6, ., 1, ., 1, ., 1, 80.43370.93980.9677yesno
Q9Y7Y8SYQ_SCHPO6, ., 1, ., 1, ., 1, 80.40880.95110.9358yesno
P14325SYQ_DICDI6, ., 1, ., 1, ., 1, 80.49110.95360.9768yesno
O62431SYQ_CAEEL6, ., 1, ., 1, ., 1, 80.42460.94360.9580yesno
P52780SYQ_LUPLU6, ., 1, ., 1, ., 1, 80.78440.98240.9874N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.180.979
3rd Layer6.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VIII001094
glutamine-tRNA ligase (EC-6.1.1.18) (786 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_LG_VIII001519
glutamyl-tRNA(Gln) amidotransferase (EC-6.3.5.7) (506 aa)
     •• 0.903
eugene3.00180130
hypothetical protein (141 aa)
     •  0.899
estExt_fgenesh4_pm.C_LG_X0145
glutamyl-tRNA(Gln) amidotransferase (529 aa)
     •  0.899
estExt_Genewise1_v1.C_LG_II3255
arginine-tRNA ligase (EC-6.1.1.19) (590 aa)
   •••• 0.765
grail3.0023017401
aspartate-tRNA ligase (EC-6.1.1.12) (530 aa)
   •••• 0.552
estExt_fgenesh4_pg.C_LG_IX0484
phenylalanyl-tRNA synthetase alpha chain (EC-6.1.1.20) (484 aa)
   •  • 0.478
gw1.64.262.1
aminoacyl-tRNA ligase (EC-6.1.1.5) (1028 aa)
   •••• 0.465
gw1.VII.873.1
aminoacyl-tRNA ligase (EC-6.1.1.5) (1117 aa)
   •••• 0.448
gw1.XI.1444.1
aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)
      • 0.440
estExt_Genewise1_v1.C_LG_IX0414
SubName- Full=Putative uncharacterized protein; (404 aa)
   •  • 0.408

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query798
PLN02859788 PLN02859, PLN02859, glutamine-tRNA ligase 0.0
PRK05347554 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Pr 0.0
PRK14703 771 PRK14703, PRK14703, glutaminyl-tRNA synthetase/Yqe 0.0
TIGR00440522 TIGR00440, glnS, glutaminyl-tRNA synthetase 0.0
PTZ00437574 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Pr 0.0
pfam00749314 pfam00749, tRNA-synt_1c, tRNA synthetases class I 1e-139
COG0008472 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synth 1e-104
PLN02907722 PLN02907, PLN02907, glutamate-tRNA ligase 1e-94
PTZ00402601 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Prov 1e-88
TIGR00463556 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, ar 7e-85
PLN03233523 PLN03233, PLN03233, putative glutamate-tRNA ligase 6e-84
PRK04156567 PRK04156, gltX, glutamyl-tRNA synthetase; Provisio 2e-81
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 3e-78
pfam04558164 pfam04558, tRNA_synt_1c_R1, Glutaminyl-tRNA synthe 3e-69
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 2e-56
pfam03950174 pfam03950, tRNA-synt_1c_C, tRNA synthetases class 2e-51
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 1e-23
PRK12558445 PRK12558, PRK12558, glutamyl-tRNA synthetase; Prov 5e-20
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 3e-19
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 4e-19
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 7e-18
TIGR00464470 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, ba 1e-16
PRK14895513 PRK14895, gltX, glutamyl-tRNA synthetase; Provisio 1e-13
PRK01406476 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed 3e-12
cd00808239 cd00808, GluRS_core, catalytic core domain of disc 1e-10
PRK05710299 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetas 3e-10
PRK12410433 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthe 4e-09
PLN02627535 PLN02627, PLN02627, glutamyl-tRNA synthetase 4e-08
pfam0455783 pfam04557, tRNA_synt_1c_R2, Glutaminyl-tRNA synthe 4e-07
cd02156105 cd02156, nt_trans, nucleotidyl transferase superfa 2e-06
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 7e-06
TIGR03838271 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA 2e-04
>gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase Back     alignment and domain information 
 Score = 1575 bits (4080), Expect = 0.0
 Identities = 658/787 (83%), Positives = 708/787 (89%), Gaps = 8/787 (1%)

Query: 13  LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNAL 72
           LELFLKIGLD+RTA+N IANNKVT+NLTAVIHEA VT+GC++ +GNLLYTVATKYP NAL
Sbjct: 9   LELFLKIGLDERTARNAIANNKVTSNLTAVIHEAGVTNGCDKTVGNLLYTVATKYPANAL 68

Query: 73  VHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 132
           VHRPTLL YIVSSKIKTPAQLEAAFSFF+STG E+F++++FEEACGVGV VS EDIE  V
Sbjct: 69  VHRPTLLSYIVSSKIKTPAQLEAAFSFFSSTGPESFDLNKFEEACGVGVVVSPEDIEAAV 128

Query: 133 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 192
           NEVFEENK  ILE RYRTNVGDL   VRKRLPWADPKIVK+LID ++YELLGE+TAAD E
Sbjct: 129 NEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKKLYELLGEKTAADNE 188

Query: 193 KLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKQVHTEIPFSD 252
           K  KKK     KEKP K E+KK A  A     EE+L P S FP PEEN+K VHTE+ FSD
Sbjct: 189 KPVKKK-----KEKPAKVEEKKVA-VAAAPPSEEELNPYSIFPQPEENFK-VHTEVFFSD 241

Query: 253 GSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYL 312
           GSVL   NTKE+L+KHL+ TGG V TRFPPEPNGYLHIGHAKAMFVDFGLAKERGG CYL
Sbjct: 242 GSVLRPSNTKEILEKHLKATGGKVYTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGCCYL 301

Query: 313 RYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQ 372
           R+DDTNPEAEKKEYIDHIEEIV+WMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQ
Sbjct: 302 RFDDTNPEAEKKEYIDHIEEIVEWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQ 361

Query: 373 TPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDL 432
           TPEEIKEYREKKMNSPWRDRPI ESLKLFEDMR G IEEGKATLRMKQDMQNDNFNMYDL
Sbjct: 362 TPEEIKEYREKKMNSPWRDRPIEESLKLFEDMRRGLIEEGKATLRMKQDMQNDNFNMYDL 421

Query: 433 IAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALG 492
           IAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDS+ENITHSLCTLEFETRRASY+WLL +LG
Sbjct: 422 IAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLDSLG 481

Query: 493 LYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAF 552
           LYQPYVWEYSRLNV+NTVMSKRKLN LVT KYVDGWDDP L+TLAGLRRRGVT T+INAF
Sbjct: 482 LYQPYVWEYSRLNVTNTVMSKRKLNRLVTEKYVDGWDDPRLLTLAGLRRRGVTPTAINAF 541

Query: 553 VQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKR 611
            +GIGI+RSD SLIR+DRLE+HIREELNKTAPRTMVVL+PLKVVITN+ESG ++ LDAKR
Sbjct: 542 CRGIGITRSDNSLIRMDRLEHHIREELNKTAPRTMVVLHPLKVVITNLESGEVIELDAKR 601

Query: 612 WPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVIL 671
           WPDAQ DD SAFYKVPFS VVYIE SDFR+KDSKDYYGLAPGKSVLLRYAFPIKCT+V+L
Sbjct: 602 WPDAQNDDPSAFYKVPFSRVVYIERSDFRLKDSKDYYGLAPGKSVLLRYAFPIKCTDVVL 661

Query: 672 SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDD 731
           +DD ET++ IRAEYDP KKTKPKGVLHWVAEPSPGV PL+VEVRLF+KLF SENPAEL+D
Sbjct: 662 ADDNETVVEIRAEYDPEKKTKPKGVLHWVAEPSPGVEPLKVEVRLFDKLFLSENPAELED 721

Query: 732 WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD 791
           WL DLNP SK VI  AYA PSL  A VGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD
Sbjct: 722 WLEDLNPQSKEVISGAYAVPSLKDAKVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD 781

Query: 792 SFPKGGK 798
           S+ KGGK
Sbjct: 782 SYGKGGK 788

Length = 788
>gnl|CDD|235424 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237793 PRK14703, PRK14703, glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|232977 TIGR00440, glnS, glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|240418 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|216096 pfam00749, tRNA-synt_1c, tRNA synthetases class I (E and Q), catalytic domain Back     alignment and domain information
>gnl|CDD|223087 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215492 PLN02907, PLN02907, glutamate-tRNA ligase Back     alignment and domain information
>gnl|CDD|240404 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232985 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>gnl|CDD|178772 PLN03233, PLN03233, putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235229 PRK04156, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|218149 pfam04558, tRNA_synt_1c_R1, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|217810 pfam03950, tRNA-synt_1c_C, tRNA synthetases class I (E and Q), anti-codon binding domain Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183594 PRK12558, PRK12558, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232986 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>gnl|CDD|184889 PRK14895, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234953 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173905 cd00808, GluRS_core, catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235573 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237094 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178234 PLN02627, PLN02627, glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|218148 pfam04557, tRNA_synt_1c_R2, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 Back     alignment and domain information
>gnl|CDD|173912 cd02156, nt_trans, nucleotidyl transferase superfamily Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234370 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 798
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 100.0
PLN02859788 glutamine-tRNA ligase 100.0
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 100.0
PRK05347554 glutaminyl-tRNA synthetase; Provisional 100.0
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 100.0
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 100.0
PLN03233523 putative glutamate-tRNA ligase; Provisional 100.0
PTZ00402601 glutamyl-tRNA synthetase; Provisional 100.0
PLN02907722 glutamate-tRNA ligase 100.0
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 100.0
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 100.0
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 100.0
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 100.0
PLN02627535 glutamyl-tRNA synthetase 100.0
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 100.0
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 100.0
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 100.0
PRK12558445 glutamyl-tRNA synthetase; Provisional 100.0
KOG1149524 consensus Glutamyl-tRNA synthetase (mitochondrial) 100.0
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 100.0
cd09287240 GluRS_non_core catalytic core domain of non-discri 100.0
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 100.0
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 100.0
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 100.0
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 100.0
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 100.0
cd00808239 GluRS_core catalytic core domain of discriminating 100.0
PF04558164 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-s 100.0
PF03950174 tRNA-synt_1c_C: tRNA synthetases class I (E and Q) 100.0
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.93
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.92
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.9
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.9
PLN02946557 cysteine-tRNA ligase 99.89
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.89
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.89
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.89
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.88
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.87
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 99.84
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.82
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.73
PF0455784 tRNA_synt_1c_R2: Glutaminyl-tRNA synthetase, non-s 99.59
PRK11893511 methionyl-tRNA synthetase; Reviewed 99.55
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.54
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.4
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.38
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.29
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 99.24
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.19
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 99.11
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.09
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.08
PRK12268556 methionyl-tRNA synthetase; Reviewed 99.06
cd00674353 LysRS_core_class_I catalytic core domain of class 99.06
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.05
PRK12267648 methionyl-tRNA synthetase; Reviewed 99.05
PLN02224616 methionine-tRNA ligase 99.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 98.85
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 98.77
PLN02610 801 probable methionyl-tRNA synthetase 98.75
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 98.68
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.68
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 98.68
PRK12451562 arginyl-tRNA synthetase; Reviewed 98.67
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 98.57
PLN02286576 arginine-tRNA ligase 98.46
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 98.35
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 98.2
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 98.12
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.06
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 97.82
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 97.75
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 97.71
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 97.69
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 97.63
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 97.6
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 97.59
PRK08560329 tyrosyl-tRNA synthetase; Validated 97.56
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 97.5
COG2511631 GatE Archaeal Glu-tRNAGln amidotransferase subunit 97.46
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 97.4
PLN02563 963 aminoacyl-tRNA ligase 97.35
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 97.29
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 97.28
PLN02943 958 aminoacyl-tRNA ligase 97.27
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 97.25
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 97.23
PLN02843 974 isoleucyl-tRNA synthetase 97.17
PRK13354410 tyrosyl-tRNA synthetase; Provisional 97.15
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 97.14
TIGR00134620 gatE_arch glutamyl-tRNA(Gln) amidotransferase, sub 97.14
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 97.13
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 97.11
PLN02381 1066 valyl-tRNA synthetase 97.09
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 97.06
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 97.06
PLN02486383 aminoacyl-tRNA ligase 97.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 96.99
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 96.91
PLN02882 1159 aminoacyl-tRNA ligase 96.91
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 96.9
PRK04028630 glutamyl-tRNA(Gln) amidotransferase subunit E; Val 96.88
PRK05912408 tyrosyl-tRNA synthetase; Validated 96.87
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 96.84
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 96.79
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 96.78
PRK05477474 gatB aspartyl/glutamyl-tRNA amidotransferase subun 96.68
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 96.67
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 96.62
PLN02751544 glutamyl-tRNA(Gln) amidotransferase 96.59
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 96.55
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 96.54
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 96.27
TIGR00133478 gatB glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 96.26
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 95.59
PLN02959 1084 aminoacyl-tRNA ligase 95.37
COG0064483 GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B su 94.65
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 94.47
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 94.45
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 94.34
PLN02886389 aminoacyl-tRNA ligase 94.29
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 94.01
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 93.81
PF02637148 GatB_Yqey: GatB domain; InterPro: IPR018027 The Ga 93.05
smart00845147 GatB_Yqey GatB domain. This domain is found in Gat 92.77
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 92.16
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 91.26
PF09424143 YqeY: Yqey-like protein; InterPro: IPR019004 Putat 91.04
PLN02943 958 aminoacyl-tRNA ligase 90.38
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 90.35
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 89.92
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 89.75
PRK13208800 valS valyl-tRNA synthetase; Reviewed 89.73
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 88.94
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 88.05
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 87.86
PRK05729874 valS valyl-tRNA synthetase; Reviewed 87.17
PHA0173576 hypothetical protein 86.79
PLN029591084 aminoacyl-tRNA ligase 86.59
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 83.61
PLN02843974 isoleucyl-tRNA synthetase 83.09
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 82.64
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 81.82
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=4.3e-222  Score=1805.63  Aligned_cols=754  Identities=57%  Similarity=0.956  Sum_probs=716.1

Q ss_pred             ChhHHHHHHHhcCCChhhHHHhhhCHHHHHHHHHHHHHcccCCCCchhhhHHHHHHHhhCCCCCCCchHHHHHHHhcCCC
Q 003751            8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKI   87 (798)
Q Consensus         8 ~~~~~~~~f~~iGl~e~ka~e~~kn~~~~~~l~~~I~~a~~~~~~~~~~g~lly~la~~~~~~~~~~~~~~~~yI~~~~i   87 (798)
                      .|++++++|.+|||||+||+||+||++|+++|..+|.+|++.++||+++|+|||+||+++++|..+|+++|++||++|+|
T Consensus         2 ~~~dl~~~f~~lGlse~k~~etlKn~kvs~~l~~~i~~a~~~~~~~~~~g~Lly~lAt~~~~q~~~~~~llv~yI~~~~i   81 (764)
T KOG1148|consen    2 AMEDLIALFTSLGLSEKKVKETLKNKKVSANLEKIIKEADVSSGCDRTTGNLLYTLATKLKPQKLAHLPLLVSYIVNGKI   81 (764)
T ss_pred             cHHHHHHHHHHcCCCHHHHHHHHhHHHHHHHHHHHHHhcccccccccccchhHHHHHhhcCccccccchHHHHHHHhccc
Confidence            57899999999999999999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             CCHHhHHHHHHHHHhcCCCCCCHHHHHHHcCCCeeeCHHHHHHHHHHHHHhhHhHHHhhccccchhhhHHHHHhhCCCCC
Q 003751           88 KTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWAD  167 (798)
Q Consensus        88 kt~~Ql~aAlkyl~~~~~~~id~~~Fe~~cGVGv~vt~e~i~~~v~~~~~~~k~~~~~~RY~~n~g~l~~~~r~~lkwad  167 (798)
                      ||++||+||++|++++   ++|..+|+++|||||+||||||+++|.++|++|++.|+++||+||.| |++.||+.|||||
T Consensus        82 kt~~ql~aa~~Y~~~~---~~~~~~fe~ecgvgvvvtpeqie~~V~~~i~~~k~~il~eRy~~~~g-l~~~~R~~LkwAD  157 (764)
T KOG1148|consen   82 KTELQLDAALEYVKSH---TLDKKDFEKECGVGVVVTPEQIEEAVRKYIAENKEKILEERYHFNKG-LFGDVRKELKWAD  157 (764)
T ss_pred             CchHHHHHHHHHHhcc---ccchhhhhhhcCccEEECHHHHHHHHHHHHHHhHHHHHHHHHhcchh-hHHHHHhhcCCCC
Confidence            9999999999999984   58889999999999999999999999999999999999999999999 9999999999999


Q ss_pred             hhhHHHHHHHHHHHhcCCCchhhhhhhhhhhhhhhccCCCcchhhcc-----ccCCCCCCCCccccCCCCCCCCCCCCcc
Q 003751          168 PKIVKQLIDARMYELLGERTAADIEKLSKKKEKKEKKEKPEKDEDKK-----FANDAPVQLPEEDLFPISNFPPPEENYK  242 (798)
Q Consensus       168 ~~~~k~~~d~~~l~lLgpK~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~n~~  242 (798)
                      ++.||++||+++++||||||++|++++.|++++  +.++++.+.++.     +++....+++|+|+.   +||+||||+ 
T Consensus       158 ~~~vk~~iD~~~l~LlGpkte~dl~~~~k~~k~--~~~k~~~~~~~~~~~~e~~s~~~~~~~e~~~~---~~hk~gent-  231 (764)
T KOG1148|consen  158 PKSVKKEIDKEVLELLGPKTEADLEKKKKKKKA--EGEKKKTVSAKKAKNQEAASDKAPQIEELFLT---KFHKPGENT-  231 (764)
T ss_pred             HHHHHHHHhhHHHHhcCccchhhcccccccccc--cccccccccCCCCCchhhhcccccchhhhhhh---hcccCCCCc-
Confidence            999999999999999999999999988666422  222222221111     122345689999999   999999999 


Q ss_pred             ccccccccCCCccccccCcHHHHHHhhhhcCCeeEEEeCCCCCCcCchhHHHHHHHHHHHHHHcCCEEEEEeecCCcccc
Q 003751          243 QVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAE  322 (798)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~hl~~~~g~v~tRFaPsPtG~LHIGharaal~n~l~Ar~~~G~~iLRidDTDp~Re  322 (798)
                      |                +|+|+|++||++|||+|+|||||+|||+||||||+|+.+||+||+.+||.|+||||||||++|
T Consensus       232 ~----------------~t~ellk~HL~~TGGkV~TRFPPEPNG~LHIGHaKAInvNFgyAk~~~G~cyLRfDDTNPEkE  295 (764)
T KOG1148|consen  232 Q----------------HTEELLKEHLERTGGKVVTRFPPEPNGILHIGHAKAINVNFGYAKAHGGVCYLRFDDTNPEKE  295 (764)
T ss_pred             c----------------chHHHHHHHHHhhCCeeEEeCCCCCCceeeecchhheeechhhhhhhCCeEEEecCCCCcchh
Confidence            6                679999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHcCCCCCcccCCchhHHHHHHHHHHHHHcCCccccCCCHHHHHHHhc-cCCCCCCCCCChHHHHHHH
Q 003751          323 KKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE-KKMNSPWRDRPIAESLKLF  401 (798)
Q Consensus       323 ~~e~~~~I~edL~wLGl~pd~i~yqSd~~~~~ye~a~~LI~~G~AY~C~cs~eel~~~r~-~~y~~~~R~~s~ee~l~~f  401 (798)
                      .++|+++|.++++|||++|++++|+||||+++|++|.+||++|+||+|||+.+||++.|+ ...+|+||+|++||||++|
T Consensus       296 ee~yf~sI~e~V~WLG~~P~kvTysSDyFdqLy~~av~LIrkG~AYVcHqt~eEik~~rg~~~~~spwRdRPieEsL~lF  375 (764)
T KOG1148|consen  296 EEEYFESIKEMVAWLGFEPYKVTYSSDYFDQLYELAVELIRKGKAYVCHQTAEEIKERRGFNERLSPWRDRPIEESLRLF  375 (764)
T ss_pred             hHHHHHHHHHHHHHhCCCceeeecchhHHHHHHHHHHHHHhcCceeEEeccHHHHHhhcCCCCCCCccccCcHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999987 3347999999999999999


Q ss_pred             HHhhcCcccCCceEEEEEecCCCCCCCcCccEEEEEecCCCCCCCCcccccccccccceeeccCCCcceEecCcccccch
Q 003751          402 EDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRR  481 (798)
Q Consensus       402 ~~m~~G~~~~g~~~lR~K~d~~~~~~~~~D~V~~Ri~~~~h~~~gd~~~g~PTY~fa~~VDD~l~gITHviRG~E~~~~t  481 (798)
                      ++|++|++++|+++||||+|++++|++|+|+|+||+.+.+|||+|++||||||||||||++||+++|||++|+.||..++
T Consensus       376 ~~Mr~Gk~~eGeAtLRmK~dl~~~~p~m~DlvayRik~~pHpRtg~kwcIYPTYDythCl~DSlEnITHSlCT~EF~~rR  455 (764)
T KOG1148|consen  376 EDMRDGKYEEGEATLRMKQDLESGNPQMWDLVAYRIKNVPHPRTGDKWCIYPTYDYTHCLVDSLENITHSLCTKEFQTRR  455 (764)
T ss_pred             HHHhcCCcCcChhheeeeeeccCCCccccccceeeeecCCCCCCCCceEEecccchhhhehhhhhhhhhHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhCCCCCceeeeeeecCCCeeeeccccccccccCccCCCCCcchhhHHHHHHCCCChHHHHHHHHHcCCCCC
Q 003751          482 ASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRS  561 (798)
Q Consensus       482 ~~q~~L~~aLg~~~P~~w~f~~Ln~~g~KLSKR~~~~lv~~g~v~gWdDPr~~tl~~lrrrG~~PeAI~~fl~~lG~s~~  561 (798)
                      .+|+|||++|++|+|.||+|||||++|++||||++.+||++|+|+||||||++||.+|||||++|+||++||+.+|+|.+
T Consensus       456 ~SY~WLcnaL~iY~P~qwEYgRLNv~~tv~SKRKi~~Lv~~~~V~~wDDPRLfTL~alRRRG~ppeAIn~F~~~lGvT~a  535 (764)
T KOG1148|consen  456 SSYYWLCNALEIYCPVQWEYGRLNVTYTVVSKRKILKLVTEGYVRGWDDPRLFTLTALRRRGFPPEAINNFCASLGVTTA  535 (764)
T ss_pred             hhHHHHHhhhhcccchhhhhceeeeeeeeeehHHHHHHhhhcccccCCCccchhhhhHHhcCCCHHHHHHHHHHhCccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccHhhHHHHHHHhhhccCCcceeEecceeEEEEeCCCCceeeeccccCCCCCCCCCCceeEeccccceeeecccccc
Q 003751          562 DSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRM  641 (798)
Q Consensus       562 ~~~~~~~~Le~~ir~~~~~~~~R~~av~dp~kl~i~N~~~~~~~~~~~p~~p~~~~~~~~g~~~v~~~~~iyIe~~D~~~  641 (798)
                      +.+++..+||+++|++++.++||.|+|++|+||+|+|+++++...+++|++|+   +|.+|+|+|||++.||||++||++
T Consensus       536 ~~~i~v~~lE~~VRd~Ln~tapR~M~VleplkVti~N~~~~~~~~i~iPd~P~---dp~~g~~~Vpft~vIYIErSDFke  612 (764)
T KOG1148|consen  536 QTTIDVARLEAAVRDYLNDTAPRLMFVLEPLKVTIENLSDDYPESIEIPDFPG---DPTSGFHKVPFTRVIYIERSDFKE  612 (764)
T ss_pred             eceecHHHHHHHHHHHHhccCcceEEeecceEEEEecCCcchhhhccCCCCCC---CCccccccccccceEEEEcccccc
Confidence            99999999999999999999999999999999999999999989999999998   799999999999999999999999


Q ss_pred             cCCccccCcCCCCEEEEeeee-eEEEEEeeecCCCCCEEEEEEEEcC-CCCCCCCeeEEeccCCCCCCCCeeEEEEeccc
Q 003751          642 KDSKDYYGLAPGKSVLLRYAF-PIKCTEVILSDDKETILHIRAEYDP-SKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEK  719 (798)
Q Consensus       642 ~~~~~~~~l~~g~~v~l~~~~-~i~~~~~~~~~~~g~v~e~~~~~~~-~~~~K~k~~I~WV~~~~~~~~~v~~evr~y~~  719 (798)
                      +++|+|+||+|||+|+|+|.+ +|.+..|. +|++|.|+||+++||+ +.++|||++|||||+     +|+.||||+|++
T Consensus       613 e~dK~f~RLtpgQpVGLr~~~~vi~~~~vv-kD~~g~v~ei~v~yd~~s~~~KPK~fIhWVse-----~Pv~vEvRlye~  686 (764)
T KOG1148|consen  613 EDDKDFFRLTPGQPVGLRYAGYVIRVVKVV-KDDEGTVIEIHVEYDPASKKKKPKAFIHWVSE-----SPVKVEVRLYEQ  686 (764)
T ss_pred             cCCcchhccCCCCcceeEeecceEEEEEEe-eCCCCceEEEEEEecccccccCCceeEEeccC-----CCeEeehhHHHH
Confidence            999999999999999999885 55555565 9999999999999998 566899999999996     499999999999


Q ss_pred             cCCCCCCCCc-cCccccCCCCCceeecceeeccccccCCCCCeEEEEEeeeEEEecCCCCCCeeEeeecCCCCCCCCC
Q 003751          720 LFNSENPAEL-DDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKG  796 (798)
Q Consensus       720 Lf~~~~p~~~-~~~~~~iN~~S~~~~~~a~~e~~~~~~~~~~~~QfeR~Gyf~~D~~s~~~~~v~n~~v~lk~~~~k~  796 (798)
                      ||+++||++. +.||+||||+|+.|+.+|++|..+...+++|+|||||+||||||+||+.++|||||||+||+++||+
T Consensus       687 LFks~NP~d~~e~fLsDiNp~S~~V~~~a~~D~~~~~a~v~DrFQfeRiGYF~VDkDSt~~kLVfNRtV~LKd~~gk~  764 (764)
T KOG1148|consen  687 LFKSENPADLNEVFLSDINPDSLVVVKGALADKSISDAKVYDRFQFERIGYFCVDKDSTPGKLVFNRTVTLKDDSGKK  764 (764)
T ss_pred             HhccCCccchhHHHHHhcCccchhhhhhhhhhhhhcccchhhhHhhhhcceeEecCCCCCceEEEEeEEEeccCCCCC
Confidence            9999999986 6799999999999999999999999999999999999999999999999999999999999998874

>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF03950 tRNA-synt_1c_C: tRNA synthetases class I (E and Q), anti-codon binding domain; InterPro: IPR020059 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PF04557 tRNA_synt_1c_R2: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 ; InterPro: IPR007638 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG2511 GatE Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00134 gatE_arch glutamyl-tRNA(Gln) amidotransferase, subunit E Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PRK04028 glutamyl-tRNA(Gln) amidotransferase subunit E; Validated Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05477 gatB aspartyl/glutamyl-tRNA amidotransferase subunit B; Validated Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PLN02751 glutamyl-tRNA(Gln) amidotransferase Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00133 gatB glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0064 GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF02637 GatB_Yqey: GatB domain; InterPro: IPR018027 The GatB domain, the function of which is uncertain, is associated with aspartyl/glutamyl amidotransferase subunit B and glutamyl amidotransferase subunit E Back     alignment and domain information
>smart00845 GatB_Yqey GatB domain Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF09424 YqeY: Yqey-like protein; InterPro: IPR019004 Putative protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; YOR215C is not an essential gene Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PHA01735 hypothetical protein Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query798
1qrs_A553 Glutaminyl-Trna Synthetase Mutant D235n Complexed W 1e-137
1o0b_A554 Crystal Structure Of L-Glutamine And Ampcpp Bound T 1e-137
1qrt_A553 Glutaminyl-Trna Synthetase Mutant D235g Complexed W 1e-137
1gsg_P553 Structure Of E.Coli Glutaminyl-Trna Synthetase Comp 1e-137
1qru_A553 Glutaminyl-Trna Synthetase Mutant I129t Complexed W 1e-137
1euq_A548 Crystal Structure Of Glutaminyl-Trna Synthetase Com 1e-136
1nyl_A539 Unliganded Glutaminyl-Trna Synthetase Length = 539 1e-136
2rd2_A556 Glutaminyl-Trna Synthetase Mutant C229r With Bound 1e-135
2hz7_A 851 Crystal Structure Of The Glutaminyl-Trna Synthetase 9e-98
3aii_A553 Archaeal Non-Discriminating Glutamyl-Trna Synthetas 3e-38
3tl4_X187 Crystal Structure Of The Trna Binding Domain Of Glu 3e-16
2o5r_A481 Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 6e-12
2cfo_A492 Non-discriminating Glutamyl-trna Synthetase From Th 1e-11
4g6z_A490 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 2e-10
3akz_B487 Crystal Structure Of Thermotoga Maritima Nondiscrim 2e-09
3afh_A488 Crystal Structure Of Thermotoga Maritima Nondiscrim 2e-09
3al0_C592 Crystal Structure Of The Glutamine Transamidosome F 3e-09
4gri_A512 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 7e-09
1g59_A468 Glutamyl-Trna Synthetase Complexed With Trna(Glu). 8e-09
1j09_A468 Crystal Structure Of Thermus Thermophilus Glutamyl- 2e-08
3pnv_A505 V369m Mutant Of Glutamyl-Trna Synthetase From Mycob 1e-06
3pny_A505 Structure Of Glutamyl-Trna Synthetase From Mycobact 2e-06
2ja2_A498 Mycobacterium Tuberculosis Glutamyl-Trna Synthetase 2e-06
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure 
Iteration: 1

 Score =  487 bits (1254), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 262 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 319
           ++++D+ L  +G +  V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP
Sbjct: 12  RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 70
Query: 320 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 378
             E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+
Sbjct: 71  VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 130
Query: 379 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 434
           EYR    +   NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + 
Sbjct: 131 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 190
Query: 435 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 493
           YRIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + + 
Sbjct: 191 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQNNRRLYDWVLDNITIP 250
Query: 494 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 553
             P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F 
Sbjct: 251 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 310
Query: 554 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 612
           + IG+++ D+ I +  LE  IRE+LN+ APR M V++P+K+VI N +  G ++ +     
Sbjct: 311 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 365
Query: 613 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 672
           P+          +VPFS  ++I+ +DFR + +K Y  L  GK V LR A+ IK  E +  
Sbjct: 366 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 424
Query: 673 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 725
           D +  I  I   Y       DP+   K KGV+HWV+      + L VE+RL+++LF+  N
Sbjct: 425 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 480
Query: 726 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 784
           P   DD+LS +NP+S +VI + +AEPSL  A  G  FQFER GYF +D + ST EK VFN
Sbjct: 481 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 539
Query: 785 RTVTLKDSFPKGGK 798
           RTV L+D++ K G+
Sbjct: 540 RTVGLRDTWAKVGE 553
>pdb|1O0B|A Chain A, Crystal Structure Of L-Glutamine And Ampcpp Bound To Glutamine Aminoacyl Trna Synthetase Length = 554 Back     alignment and structure
>pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1GSG|P Chain P, Structure Of E.Coli Glutaminyl-Trna Synthetase Complexed With Trnagln And Atp At 2.8 Angstroms Resolution Length = 553 Back     alignment and structure
>pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthetase Complexed With A Trna- Gln Mutant And An Active-Site Inhibitor Length = 548 Back     alignment and structure
>pdb|1NYL|A Chain A, Unliganded Glutaminyl-Trna Synthetase Length = 539 Back     alignment and structure
>pdb|2RD2|A Chain A, Glutaminyl-Trna Synthetase Mutant C229r With Bound Analog 5'-O-[n-(L- Glutaminyl)-Sulfamoyl]adenosine Length = 556 Back     alignment and structure
>pdb|2HZ7|A Chain A, Crystal Structure Of The Glutaminyl-Trna Synthetase From Deinococcus Radiodurans Length = 851 Back     alignment and structure
>pdb|3AII|A Chain A, Archaeal Non-Discriminating Glutamyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Length = 553 Back     alignment and structure
>pdb|3TL4|X Chain X, Crystal Structure Of The Trna Binding Domain Of Glutaminyl-Trna Synthetase From Saccharomyces Cerevisiae Length = 187 Back     alignment and structure
>pdb|2O5R|A Chain A, Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 6.1.1.17) (Glutamate-Trna Ligase 1) (Glurs 1) (Tm1351) From Thermotoga Maritima At 2.5 A Resolution Length = 481 Back     alignment and structure
>pdb|2CFO|A Chain A, Non-discriminating Glutamyl-trna Synthetase From Thermosynechococcus Elongatus In Complex With Glu Length = 492 Back     alignment and structure
>pdb|4G6Z|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Burkholderia Thailandensis Bound To L-Glutamate Length = 490 Back     alignment and structure
>pdb|3AKZ|B Chain B, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With Trnagln And A Glutamyl-Amp Analog Length = 487 Back     alignment and structure
>pdb|3AFH|A Chain A, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With A Glutamyl-Amp Analog Length = 488 Back     alignment and structure
>pdb|3AL0|C Chain C, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 592 Back     alignment and structure
>pdb|4GRI|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Borrelia Burgdorferi Bound To Glutamic Acid And Zinc Length = 512 Back     alignment and structure
>pdb|1G59|A Chain A, Glutamyl-Trna Synthetase Complexed With Trna(Glu). Length = 468 Back     alignment and structure
>pdb|1J09|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna Synthetase Complexed With Atp And Glu Length = 468 Back     alignment and structure
>pdb|3PNV|A Chain A, V369m Mutant Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis Length = 505 Back     alignment and structure
>pdb|3PNY|A Chain A, Structure Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis In Space Group P21 Length = 505 Back     alignment and structure
>pdb|2JA2|A Chain A, Mycobacterium Tuberculosis Glutamyl-Trna Synthetase Length = 498 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query798
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 0.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 0.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 0.0
3tl4_X187 Glutaminyl-tRNA synthetase; glutamine, appended do 2e-63
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 1e-16
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 7e-16
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 3e-15
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 5e-14
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 5e-14
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 1e-10
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 2e-10
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Length = 553 Back     alignment and structure
 Score =  871 bits (2252), Expect = 0.0
 Identities = 259/552 (46%), Positives = 354/552 (64%), Gaps = 25/552 (4%)

Query: 262 KEVLDKHLEV-TGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 320
           ++++D+ L       V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP 
Sbjct: 12  RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 71

Query: 321 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 379
            E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+E
Sbjct: 72  KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 131

Query: 380 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 435
           YR    +   NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + Y
Sbjct: 132 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 191

Query: 436 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 494
           RIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + +  
Sbjct: 192 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV 251

Query: 495 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 554
            P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F +
Sbjct: 252 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCK 311

Query: 555 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 614
            IG+++ D+ I +  LE  IRE+LN+ APR M V++P+K+VI N + G    +     P 
Sbjct: 312 RIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQ-GEGEMVTMPNHP- 369

Query: 615 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 674
                     +VPFS  ++I+ +DFR + +K Y  L  GK V LR A+ IK   V   D 
Sbjct: 370 --NKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVE-KDA 426

Query: 675 KETILHIRAEYDPSKKT-------KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPA 727
           +  I  I   YD    +       K KGV+HWV+      + L VE+RL+++LF+  NP 
Sbjct: 427 EGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAA----HALPVEIRLYDRLFSVPNPG 482

Query: 728 ELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRT 786
             DD+LS +NP+S V+  + +AEPSL  A  G  FQFER GYF +D + ST EK VFNRT
Sbjct: 483 AADDFLSVINPESLVIK-QGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRT 541

Query: 787 VTLKDSFPKGGK 798
           V L+D++ K G+
Sbjct: 542 VGLRDTWAKVGE 553
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Length = 851 Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 553 Back     alignment and structure
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae} Length = 187 Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Length = 490 Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Length = 298 Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Length = 492 Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Length = 481 Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Length = 468 Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Length = 498 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Length = 592 Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Length = 488 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query798
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 100.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 100.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 100.0
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 100.0
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 100.0
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 100.0
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 100.0
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 100.0
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 100.0
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 100.0
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 100.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 100.0
3tl4_X187 Glutaminyl-tRNA synthetase; glutamine, appended do 100.0
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.95
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.92
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.91
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.87
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.86
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 99.8
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 99.73
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 99.65
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.65
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 99.54
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 99.54
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 99.54
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 99.41
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 99.41
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.39
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 99.31
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 99.29
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.23
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 99.15
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 99.02
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 98.77
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 98.55
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 98.52
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 98.49
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 98.33
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 98.3
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 98.28
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 97.88
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 97.83
1wkb_A 810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 97.81
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 97.56
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 97.54
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 97.53
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 97.52
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 97.44
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 97.43
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 97.34
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 97.33
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 97.33
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 97.23
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 97.14
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 97.14
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 97.02
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 96.99
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 96.96
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 96.94
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 96.93
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 96.67
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 96.53
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.53
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 96.49
3al0_B482 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; 96.31
3ip4_B483 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; 96.25
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 96.08
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 95.95
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 95.91
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 95.49
3h0l_B478 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s 94.83
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 94.79
1zq1_C633 Glutamyl-tRNA(Gln) amidotransferase subunit E; X-R 94.28
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 94.23
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 93.29
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 92.56
2d6f_C619 Glutamyl-tRNA(Gln) amidotransferase subunit E; lig 92.01
2hz7_A851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 91.96
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 91.74
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 90.69
1ng6_A148 Hypothetical protein YQEY; structural genomics, do 90.61
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 89.85
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 89.3
3p0j_A690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 89.1
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 83.28
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
Probab=100.00  E-value=1.9e-141  Score=1207.95  Aligned_cols=526  Identities=49%  Similarity=0.866  Sum_probs=493.4

Q ss_pred             HHHHHHhhhhc-CCeeEEEeCCCCCCcCchhHHHHHHHHHHHHHHcCCEEEEEeecCCcccchHHHHHHHHHHHHHcCCC
Q 003751          262 KEVLDKHLEVT-GGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWE  340 (798)
Q Consensus       262 ~~~~~~hl~~~-~g~v~tRFaPsPtG~LHIGharaal~n~l~Ar~~~G~~iLRidDTDp~Re~~e~~~~I~edL~wLGl~  340 (798)
                      ..++++.|+.. .++||||||||||||||||||||||+||++||+|||+|+||||||||+|+.++|+++|+++|+|||+.
T Consensus        12 ~~~i~~dl~~~~~~~v~tRFaPSPtG~LHIGhaRtal~n~l~Ar~~gG~fiLRieDTD~~R~~~e~~~~I~edL~wLGl~   91 (553)
T 1qtq_A           12 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFH   91 (553)
T ss_dssp             HHHHHHHHHHTSCSSCEEEECCCTTSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGGGCCHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHhHhhcCCcCceEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCEEEEEECCCCchhcCHHHHHHHHHHHHHcCCC
Confidence            66788888764 35799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-cccCCchhHHHHHHHHHHHHHcCCccccCCCHHHHHHHhc----cCCCCCCCCCChHHHHHHHHHhhcCcccCCceE
Q 003751          341 PF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEEGKAT  415 (798)
Q Consensus       341 pd-~i~yqSd~~~~~ye~a~~LI~~G~AY~C~cs~eel~~~r~----~~y~~~~R~~s~ee~l~~f~~m~~G~~~~g~~~  415 (798)
                      || .++|||+||++||++|++||++|+||+|+||+++|++.|+    ++++++||+++++|++.+|++|++|.+.+|+++
T Consensus        92 wde~~~~qSer~~~~~~~a~~Li~~G~AY~c~ct~eel~~~r~~~~~~g~~~~~R~~s~ee~~~~fe~m~~G~~~~g~~~  171 (553)
T 1qtq_A           92 WSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKAC  171 (553)
T ss_dssp             CSSSCEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHHCCSSSCCCCCTTTTCCHHHHHHHHHHHHTTCSCTTSCE
T ss_pred             CCCCCeehcccHHHHHHHHHHHHHCCCceecCCCHHHHHHHhcccccCCCCCccccCchhhhHhHHHHHhCCCccCCceE
Confidence            96 6899999999999999999999999999999999999885    578899999999999999999999998889999


Q ss_pred             EEEEecCCCCCCCcCccEEEEEecCCCCCCCCcccccccccccceeeccCCCcceEecCcccccchhhHHHHHHHhCCC-
Q 003751          416 LRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLY-  494 (798)
Q Consensus       416 lR~K~d~~~~~~~~~D~V~~Ri~~~~h~~~gd~~~g~PTY~fa~~VDD~l~gITHviRG~E~~~~t~~q~~L~~aLg~~-  494 (798)
                      ||+|+++.+++.+|+|+|+||+...+||+|||+|+||||||||||||||+|||||||||.||++|++.|.||+++||++ 
T Consensus       172 lR~kid~~~~~~~~~D~Vl~R~~~~~h~~~~d~w~g~PtY~la~vvDDh~~GITHviRg~e~~~n~~~q~~l~~alg~~~  251 (553)
T 1qtq_A          172 LRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV  251 (553)
T ss_dssp             EEECSCTTCSSGGGSSCEEEEECCCCBTTTBTSCSEEECHHHHHHHHHHHTTCSEEEEEGGGTTTHHHHHHHHHTSCCSC
T ss_pred             EEEecccccCCCCCCCcEEEEecCCCCCccCCCCccccccccccEEEeccCCcceEeeccchhhhHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCceeeeeeecCCCeeeeccccccccccCccCCCCCcchhhHHHHHHCCCChHHHHHHHHHcCCCCCCccccHhhHHHHH
Q 003751          495 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHI  574 (798)
Q Consensus       495 ~P~~w~f~~Ln~~g~KLSKR~~~~lv~~g~v~gWdDPr~~tl~~lrrrG~~PeAI~~fl~~lG~s~~~~~~~~~~Le~~i  574 (798)
                      .|.||+|+|||++|+|||||+++++|++|+|+||||||++||++||++||+|+||++||+++||++++..+++..|++++
T Consensus       252 ~P~~~~f~hLn~~g~KLSKR~~~~~v~~g~v~gWDDPr~~Ti~~lr~rGy~PeAirnfl~~lG~s~~~~~~e~~~le~~~  331 (553)
T 1qtq_A          252 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCI  331 (553)
T ss_dssp             CCEEEEECCCCBTTSCCCHHHHHHHHHTTSSSCTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHHHHHH
T ss_pred             CCCeEEEEeecCCCccccccccccccccCcccCCCCcchhhHHHHHHCCCCHHHHHHHHHHcCCCCCccccchhhHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999998888999999999


Q ss_pred             HHhhhccCCcceeEecceeEEEEeCCCCceeeeccccCCCCCCCCCCceeEeccccceeeecccccccCCccccCcCCCC
Q 003751          575 REELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGK  654 (798)
Q Consensus       575 r~~~~~~~~R~~av~dp~kl~i~N~~~~~~~~~~~p~~p~~~~~~~~g~~~v~~~~~iyIe~~D~~~~~~~~~~~l~~g~  654 (798)
                      +..++..++|+|+||||+||.|+|+| +..+.+++|+||.   +|++|.|.++|++.||||++||++.++++|+||+||+
T Consensus       332 ~~~l~~~~~r~~av~d~~Kl~~~N~~-~~~~~~~~p~~p~---~~~~g~r~~~~~~~i~ie~~Df~e~~~~~~~rl~~g~  407 (553)
T 1qtq_A          332 REDLNENAPRAMAVIDPVKLVIENYQ-GEGEMVTMPNHPN---KPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGK  407 (553)
T ss_dssp             HHHHHHHSCEECEESSEEEEEBTTCC-SSCEEEEEESCSS---CGGGCEEEEEECSEEEEETTTEESSCCTTCCSEETTS
T ss_pred             HhCcccccccccceeccceEEEEcCC-CceEEEEecCCCC---ChHHhhhhHhhCceEEEEHHHhhccCccccccCCCCC
Confidence            98888889999999999999999998 5556788999988   7999999999999999999999999999999999999


Q ss_pred             EEEEeeeeeEEEEEeeecCCCCCEEEEEEEEcCCC-------CCCCCeeEEeccCCCCCCCCeeEEEEeccccCCCCCCC
Q 003751          655 SVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSK-------KTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPA  727 (798)
Q Consensus       655 ~v~l~~~~~i~~~~~~~~~~~g~v~e~~~~~~~~~-------~~K~k~~I~WV~~~~~~~~~v~~evr~y~~Lf~~~~p~  727 (798)
                      +|+|+++|+|+|++++ +|++|+|++|+|+|+++.       .+|+|++|||||+    .++++||||+|++||++++|+
T Consensus       408 ~vrL~~~~~i~~~~~~-kd~~g~v~~~~~~~~~~~~~g~~~~~~k~k~~ihWv~~----~~~~~~~~~~yd~L~~~~~p~  482 (553)
T 1qtq_A          408 EVRLRNAYVIKAERVE-KDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSA----AHALPVEIRLYDRLFSVPNPG  482 (553)
T ss_dssp             EEEETTSCEEEEEEEE-CCSSSCCCEEEECCCSSCC-----------CEECCEES----TTCEEEEEEEECCSBSSSCGG
T ss_pred             EEEeccEEEEEEEEEE-EcCCCCEEEEEEEEecccccCCCccccccCCEEEEeec----CCCEeEEEEecccccCCCCCC
Confidence            9999999999999999 899999999999998852       3789999999998    578999999999999999998


Q ss_pred             CccCccccCCCCCceeecceeeccccccCCCCCeEEEEEeeeEEEec-CCCCCCeeEeeecCCCCCCCCCC
Q 003751          728 ELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDK-DSTPEKLVFNRTVTLKDSFPKGG  797 (798)
Q Consensus       728 ~~~~~~~~iN~~S~~~~~~a~~e~~~~~~~~~~~~QfeR~Gyf~~D~-~s~~~~~v~n~~v~lk~~~~k~~  797 (798)
                      +.++|+++|||+|++++ .|++||++.++++|++|||||+||||||+ ||+++++||||||+||++++|..
T Consensus       483 ~~~~~~~~~np~s~~~~-~~~~e~~~~~~~~~~~~QfeR~Gyf~~D~~~~~~~~~vfnr~v~l~~~~~~~~  552 (553)
T 1qtq_A          483 AADDFLSVINPESLVIK-QGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVG  552 (553)
T ss_dssp             GSTTGGGGBCTTSEEEE-EEEECGGGGGCCTTCEEEETTTEEEESCTTTCCSSSCEEEEEEECCCC-----
T ss_pred             cCcchhhhcCCcchhhe-eeEecHhHhhCCCCCEEEEEEeeEEEECcCCCCCCCeeEEeEEEcccchhhhc
Confidence            66899999999999987 68999999999999999999999999996 89999999999999999999853
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1zq1_C Glutamyl-tRNA(Gln) amidotransferase subunit E; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: a.182.1.2 d.74.4.1 d.128.1.5 Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>2d6f_C Glutamyl-tRNA(Gln) amidotransferase subunit E; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: a.182.1.2 d.74.4.1 d.128.1.5 Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1ng6_A Hypothetical protein YQEY; structural genomics, domain GATB/YQEY, PFAM02637, DUF186, PSI, protein structure initiative; 1.40A {Bacillus subtilis} SCOP: a.182.1.1 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 798
d1gtra2331 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (Gln 5e-80
d1j09a2305 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS 2e-56
d1gtra1209 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), 2e-54
d1nzja_286 c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB 4e-45
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 2e-06
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 0.002
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutaminyl-tRNA synthetase (GlnRS)
species: Escherichia coli [TaxId: 562]

 Score =  258 bits (659), Expect = 5e-80
 Identities = 168/326 (51%), Positives = 226/326 (69%), Gaps = 7/326 (2%)

Query: 262 KEVLDKHLEV-TGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 320
           ++++D+ L       V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP 
Sbjct: 5   RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 64

Query: 321 AEKKEYIDHIEEIVQWMGW-EPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 379
            E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+E
Sbjct: 65  KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 124

Query: 380 YRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 435
           YR        NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + Y
Sbjct: 125 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 184

Query: 436 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 494
           RIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + +  
Sbjct: 185 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV 244

Query: 495 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 554
            P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F +
Sbjct: 245 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCK 304

Query: 555 GIGISRSDSLIRLDRLEYHIREELNK 580
            IG+++ D+ I +  LE  IRE+LN+
Sbjct: 305 RIGVTKQDNTIEMASLESCIREDLNE 330
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Length = 305 Back     information, alignment and structure
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Length = 286 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query798
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 100.0
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 100.0
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 100.0
d1gtra1209 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon 100.0
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.53
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.51
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.46
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.2
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.12
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.1
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.03
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 98.88
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.49
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.49
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 97.85
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 96.81
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 96.35
d1i6la_326 Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus ste 94.72
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 93.72
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutaminyl-tRNA synthetase (GlnRS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-80  Score=672.19  Aligned_cols=319  Identities=52%  Similarity=0.916  Sum_probs=301.9

Q ss_pred             HHHHHHhhhhc-CCeeEEEeCCCCCCcCchhHHHHHHHHHHHHHHcCCEEEEEeecCCcccchHHHHHHHHHHHHHcCCC
Q 003751          262 KEVLDKHLEVT-GGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWE  340 (798)
Q Consensus       262 ~~~~~~hl~~~-~g~v~tRFaPsPtG~LHIGharaal~n~l~Ar~~~G~~iLRidDTDp~Re~~e~~~~I~edL~wLGl~  340 (798)
                      .++|++||... +++|+|||||||||+||||||||||+||++||++||+|+|||||||++|+.++|+++|+++|+||||.
T Consensus         5 ~~~~~~~l~~~~~~~v~tRFAPSPTG~LHiG~~rtal~n~l~Ak~~~G~fiLRIEDtD~~R~~~~~~~~I~~dL~WLGl~   84 (331)
T d1gtra2           5 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFH   84 (331)
T ss_dssp             HHHHHHHHHHTSCSSCEEEECCCSSSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGGGCCHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhcCCCCeEEEEeCCCCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCcCCCCcccchHHHHHHHHHHHHhcc
Confidence            67899999986 56899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-cccCCchhHHHHHHHHHHHHHcCCccccCCCHHHHHHHhc----cCCCCCCCCCChHHHHHHHHHhhcCcccCCceE
Q 003751          341 PF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEEGKAT  415 (798)
Q Consensus       341 pd-~i~yqSd~~~~~ye~a~~LI~~G~AY~C~cs~eel~~~r~----~~y~~~~R~~s~ee~l~~f~~m~~G~~~~g~~~  415 (798)
                      || .++|||+|++.|++++++|+++|+||+|+||++|+.+.|+    .+.+++||.+...+++..++.|..+....+..+
T Consensus        85 wD~~~~~QS~r~~~Y~~~~~~L~~~G~aY~C~cs~eel~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (331)
T d1gtra2          85 WSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKAC  164 (331)
T ss_dssp             CSSSCEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHTCCSSSCCCCCTTTTCCHHHHHHHHHHHHHTCSCTTSCE
T ss_pred             ccccceecchHHHHHHHHHHhhhhcCCcccccccHHHHHHHHhhhhccCCCCCCCCccccccHHHhhHHhhccccCCceE
Confidence            98 5778999999999999999999999999999999999876    457889999999999999999999888888899


Q ss_pred             EEEEecCCCCCCCcCccEEEEEecCCCCCCCCcccccccccccceeeccCCCcceEecCcccccchhhHHHHHHHhCCCC
Q 003751          416 LRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQ  495 (798)
Q Consensus       416 lR~K~d~~~~~~~~~D~V~~Ri~~~~h~~~gd~~~g~PTY~fa~~VDD~l~gITHviRG~E~~~~t~~q~~L~~aLg~~~  495 (798)
                      +|++++..+.+..++|++++++.+..|...+.+++|+|||||||||||++|||||||||.||+.+|+.|.||+++||++.
T Consensus       165 ~r~~~~~~~~~~~~~d~~~~~~~~~~~d~v~~r~dg~ptY~lA~vVDD~~~gIThViRG~D~l~~T~~q~~l~~~Lg~~~  244 (331)
T d1gtra2         165 LRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV  244 (331)
T ss_dssp             EEECSCTTCSSGGGSSCEEEEECCCCBTTTBTSCSEEECHHHHHHHHHHHHTCSEEEEEGGGTTTHHHHHHHHHHSCCSC
T ss_pred             EEEecccCCCceeEEccceeeeccCCCcccccccccccHHhhhHHHhhhhhcccceecccccccccHHHHHHHHhccCCC
Confidence            99999988888899999999999988888888899999999999999999999999999999999999999999999988


Q ss_pred             Cceeee-eeecCCCeeeeccccccccccCccCCCCCcchhhHHHHHHCCCChHHHHHHHHHcCCCCCCccccHhhHHHHH
Q 003751          496 PYVWEY-SRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHI  574 (798)
Q Consensus       496 P~~w~f-~~Ln~~g~KLSKR~~~~lv~~g~v~gWdDPr~~tl~~lrrrG~~PeAI~~fl~~lG~s~~~~~~~~~~Le~~i  574 (798)
                      |.++|+ .+++.+|++||||++..+++++.+.||||||++||.+||++||+|+||+|||+.||||.+++.+++..|++++
T Consensus       245 p~~~h~~~~l~~~g~~lskr~l~~~~~~~~~~~~dd~~~~sl~~lr~~G~~peai~nyla~LGws~~d~~~e~~sLe~~~  324 (331)
T d1gtra2         245 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCI  324 (331)
T ss_dssp             CCEEEEECCCCBTTSCCCHHHHHHHHHTTSSSSTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHHHHHH
T ss_pred             CcceeeccccccccchhhhcccchhcccCccccccCCCcccHHHHHHCCCCHHHHHHHHHHhCCCCCCCcccHHhHHHHH
Confidence            766654 6789999999999999999999999999999999999999999999999999999999998888999999999


Q ss_pred             HHhhhc
Q 003751          575 REELNK  580 (798)
Q Consensus       575 r~~~~~  580 (798)
                      |..+++
T Consensus       325 r~~ln~  330 (331)
T d1gtra2         325 REDLNE  330 (331)
T ss_dssp             HHHHHH
T ss_pred             HHhccC
Confidence            988764
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure