Citrus Sinensis ID: 003973

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780--

MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETIKERPSRKNKKKEKEQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSRTSTPSSKRSGSRKKNPWQ

ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHHccccccccEEEcccccHHHHHccccEEEcccccccccHHHHHHHHccccHHHHHHHHHcccccEEEEEEccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccEEEcccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccc

ccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccEcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccHHHHHccccEEEEccccccccHHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccEEHccHHHHHHHHHHccccccEEEEEHHcccEEEccccccEEEEcccccccHHHHHHHHccccHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHccccccccccccccccccEEEcccccHHHHHHHHHHEEEEEcccccccccccccccEcccccccccHEEEEEccccEEEEEEEEccccccccccccHHHHccccccccccccccccccc

MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYesvihefdpyfnyRVTQFLTKngiydfwnwfddrtwyplgrviggtvypgltltAGTIWWLLNSlniplsvetvcvFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYisrsvagsydnEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPvvgfnavmtsEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVAssptkgwsgrslslldptyaskyipiiasvsehqpptwpsyfmdINVLAFLVPAGIIacflplsdassFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILgfseadagdgssanvvpendavkvdkseetikerpsrknkkKEKEQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAaeaysapsivltsytheglhvFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIvdnntwnnthiatvgtamsspeKAAWEIFNSLDVKYVLVVFGGlvgypsddiNKFLWMVRIgggvfphikepdylrdgqyridsqatpTMLNCLMYKLSYYRFvetdgkgfdrVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYklkpsknrirgkmkksksrtstpsskrsgsrkknpwq

MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVassptkgwsgrslSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSeadagdgssanvvpendavkvdkseetikerpsrknkkkekeQMEKaqaektsaksktekrllVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVetdgkgfdrvRRTEIGkkyfklthfeevftthhwmvriyklkpsknrirgkmkksksrtstpsskrsgsrkknpwq

MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKgagagltaaallaMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYaplvvlgtllaalvpvvgFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKvavtlvvsvglvvccaviailvalvaSSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETIkerpsrknkkkekeqmekaqaekTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDvkyvlvvfgglvgyPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKNRIrgkmkksksrtstpsskrsgsrkkNPWQ

**********TLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFS************************************************************RLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKL***********************************

*****************NVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSA************************************AQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKN******************************

MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKV************************************TEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKN******************************

**********TLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIK**********************************************************************RLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPS********************************

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MAAAAKAGEATLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETIKERPSRKNxxxxxxxxxxxxxxxxxxxxxxxKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSRTSTPSSKRSGSRKKNPWQ

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		782	2.2.26 [Sep-21-2011]
Q93ZY3		779	Dolichyl-diphosphooligosa	yes	no	0.974	0.978	0.863	0.0
Q6F2Z1		787	Dolichyl-diphosphooligosa	yes	no	0.991	0.984	0.828	0.0
Q54NM9		714	Dolichyl-diphosphooligosa	yes	no	0.852	0.934	0.514	0.0
Q2KJI2		705	Dolichyl-diphosphooligosa	yes	no	0.864	0.958	0.506	0.0
P46978		705	Dolichyl-diphosphooligosa	yes	no	0.863	0.957	0.508	0.0
Q5RCE2		705	Dolichyl-diphosphooligosa	yes	no	0.863	0.957	0.508	0.0
P46977		705	Dolichyl-diphosphooligosa	yes	no	0.863	0.957	0.508	0.0
Q9FX21		735	Dolichyl-diphosphooligosa	no	no	0.879	0.936	0.520	0.0
Q7XQ88		721	Dolichyl-diphosphooligosa	no	no	0.864	0.937	0.534	0.0
Q3TDQ1		823	Dolichyl-diphosphooligosa	no	no	0.896	0.851	0.489	0.0

>sp\|Q93ZY3\|STT3A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Arabidopsis thaliana GN=STT3A PE=1 SV=1	Back alignment and function desciption

 Score = 1343 bits (3475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/772 (86%), Positives = 711/772 (92%), Gaps = 10/772 (1%)

Query: 12  LRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFW 71
           +R+AFGNVLS  IL+LIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFL+KNGIY+FW
Sbjct: 15  MRNAFGNVLSVLILVLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLSKNGIYEFW 74

Query: 72  NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASW 131
           NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWW LNSLNIPLSVETVCVFTAP+FSAFASW
Sbjct: 75  NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWGLNSLNIPLSVETVCVFTAPVFSAFASW 134

Query: 132 ATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNT 191
           ATYLLTKEVKG+GAGL AAALLAMVPSYISRSVAGSYDNEAVAIFALI TFYLYIKTLNT
Sbjct: 135 ATYLLTKEVKGSGAGLAAAALLAMVPSYISRSVAGSYDNEAVAIFALIFTFYLYIKTLNT 194

Query: 192 GSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTL 251
           GSLFYATLNA+AYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYS RLYIAYAPLVVLGTL
Sbjct: 195 GSLFYATLNALAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSPRLYIAYAPLVVLGTL 254

Query: 252 LAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVV 311
           LAALVPVVGFNAV+TSEHFASFLVFII+HVVALVYYIKGILSPKMFKVAVTLVVS+G+VV
Sbjct: 255 LAALVPVVGFNAVLTSEHFASFLVFIIIHVVALVYYIKGILSPKMFKVAVTLVVSIGMVV 314

Query: 312 CCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV 371
           C  V+AILVALVASSPT GWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV
Sbjct: 315 CFIVVAILVALVASSPTGGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV 374

Query: 372 LAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAF 431
           LAFLVPAGIIACF PLSDASSFVVLYIV SVYFSGVMVRLMLV APAACIMSGIALSQAF
Sbjct: 375 LAFLVPAGIIACFSPLSDASSFVVLYIVMSVYFSGVMVRLMLVLAPAACIMSGIALSQAF 434

Query: 432 DVFTRSIKFQLLRILGFSEADAGDGSSANVVPEND--AVKVDKSEETIKERPSRKNKKKE 489
           DVFT SIK+Q L     S  DA D +S N  P++D  A K DK EE +KER S+K KKKE
Sbjct: 435 DVFTGSIKYQ-LGASSNSTDDAEDNTSTNNAPKDDVSAGKTDKGEEIVKERSSKKGKKKE 493

Query: 490 KEQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPS 549
           +E      A+K S K+K +K+ LVLP+E S++ LLLL+ +GAFYV+HCVWAAAEAYSAPS
Sbjct: 494 RE-----PADKPSVKAKIKKKALVLPLEASIVALLLLIMLGAFYVIHCVWAAAEAYSAPS 548

Query: 550 IVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWN 609
           IVLTS + +GLHVFDDFRE+YAWL HNT+VDDKVASWWDYGYQTTAMANRTVIVDNNTWN
Sbjct: 549 IVLTSQSRDGLHVFDDFRESYAWLSHNTDVDDKVASWWDYGYQTTAMANRTVIVDNNTWN 608

Query: 610 NTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFP 669
           NTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGL+GYPSDDINKFLWMVRIGGGVFP
Sbjct: 609 NTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLIGYPSDDINKFLWMVRIGGGVFP 668

Query: 670 HIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLT 729
           HIKE DYLRDGQYRIDS+ATPTMLN LMYKLSYYRFVETDGKG+DRVRRTEIGKK+FKLT
Sbjct: 669 HIKEADYLRDGQYRIDSEATPTMLNSLMYKLSYYRFVETDGKGYDRVRRTEIGKKHFKLT 728

Query: 730 HFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSRTSTPSSKRSGSRKKNPW 781
           HFEEVFT+HHWMVR+YKLKP +NRIRGK KK KS+TS+  S +S   KKNPW
Sbjct: 729 HFEEVFTSHHWMVRLYKLKPPRNRIRGKAKKLKSKTSSGLSSKSA--KKNPW 778

Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). SST3A seems to be involved in complex substrate specificity (By similarity). Controls adaptive responses to salt/osmotic stress. Acts as a key glycosylation determinant for EFR function during plant innate immunity.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8

>sp\|Q6F2Z1\|STT3A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Oryza sativa subsp. japonica GN=STT3A PE=2 SV=1	Back alignment and function description

>sp\|Q54NM9\|STT3_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Dictyostelium discoideum GN=stt3 PE=3 SV=1	Back alignment and function description

>sp\|Q2KJI2\|STT3A_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Bos taurus GN=STT3A PE=2 SV=1	Back alignment and function description

>sp\|P46978\|STT3A_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Mus musculus GN=Stt3a PE=1 SV=1	Back alignment and function description

>sp\|Q5RCE2\|STT3A_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Pongo abelii GN=STT3A PE=2 SV=1	Back alignment and function description

>sp\|P46977\|STT3A_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Homo sapiens GN=STT3A PE=1 SV=2	Back alignment and function description

>sp\|Q9FX21\|STT3B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Arabidopsis thaliana GN=STT3B PE=1 SV=1	Back alignment and function description

>sp\|Q7XQ88\|STT3B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Oryza sativa subsp. japonica GN=STT3B PE=2 SV=2	Back alignment and function description

>sp\|Q3TDQ1\|STT3B_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		782
224143622		765	predicted protein [Populus trichocarpa]	0.965	0.986	0.891	0.0
255546369		779	oligosaccharyl transferase, putative [Ri	0.993	0.997	0.885	0.0
225445126		778	PREDICTED: dolichyl-diphosphooligosaccha	0.993	0.998	0.890	0.0
356495925		778	PREDICTED: dolichyl-diphosphooligosaccha	0.989	0.994	0.873	0.0
357444875		773	Dolichyl-diphosphooligosaccharide-protei	0.987	0.998	0.868	0.0
449465336		776	PREDICTED: dolichyl-diphosphooligosaccha	0.987	0.994	0.867	0.0
449520405		763	PREDICTED: dolichyl-diphosphooligosaccha	0.964	0.988	0.878	0.0
18419993		779	dolichyl-diphosphooligosaccharide--prote	0.974	0.978	0.863	0.0
297808033		779	hypothetical protein ARALYDRAFT_488863 [	0.974	0.978	0.865	0.0
15215736		779	AT5g19690/T29J13_110 [Arabidopsis thalia	0.974	0.978	0.862	0.0

>gi\|224143622\|ref\|XP_002325019.1\| predicted protein [Populus trichocarpa] gi\|222866453\|gb\|EEF03584.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1392 bits (3603), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/766 (89%), Positives = 715/766 (93%), Gaps = 11/766 (1%)

Query: 1   MAAAAKAGEAT---LRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYR 57
           MA    + EAT   LR+AFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYR
Sbjct: 1   MADGESSKEATARTLRNAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYR 60

Query: 58  VTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETV 117
           VTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGT+WWLLNSLNIPLSVETV
Sbjct: 61  VTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTLWWLLNSLNIPLSVETV 120

Query: 118 CVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFA 177
           CVFTAPIFSAFASWATYLLTKEVKG GAGLTAA LLAMVPSYISRSVAGSYDNEAVAIFA
Sbjct: 121 CVFTAPIFSAFASWATYLLTKEVKGTGAGLTAAVLLAMVPSYISRSVAGSYDNEAVAIFA 180

Query: 178 LIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSR 237
           LI TFYLYIKTLNTGSLFYATLNA+AYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSR
Sbjct: 181 LIFTFYLYIKTLNTGSLFYATLNALAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSR 240

Query: 238 LYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMF 297
           LYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFII+HVVALVY++KG LSP+MF
Sbjct: 241 LYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIIIHVVALVYHVKGNLSPRMF 300

Query: 298 KVAVTLVVSVGLVVCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEH 357
           KVAVTLVVSVGLVVCCA+IA+L+ALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEH
Sbjct: 301 KVAVTLVVSVGLVVCCAMIAVLIALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEH 360

Query: 358 QPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAP 417
           QPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLV AP
Sbjct: 361 QPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVLAP 420

Query: 418 AACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETI 477
           AACIMSGIALS+AF+V TRSIKFQL    G S++   D S       ND  K +K +ET+
Sbjct: 421 AACIMSGIALSEAFNVLTRSIKFQLPGSSGTSQSR--DTSLNTDGEHNDIAKTEKMDETV 478

Query: 478 KERPSRKNKKKEKEQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHC 537
           KERPS+KN+KKEKE +EKA     S +S+ E+RLLVLP+E SVI ++LLV +GAFYVVHC
Sbjct: 479 KERPSKKNRKKEKEPVEKA-----SIRSRIERRLLVLPLEASVIAIILLVLLGAFYVVHC 533

Query: 538 VWAAAEAYSAPSIVLTSYTHE-GLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAM 596
           VWAAAEAYSAPSIVLT+Y+ + GLHVFDDFREAYAWL HNTEVDDKVASWWDYGYQTTAM
Sbjct: 534 VWAAAEAYSAPSIVLTTYSRDGGLHVFDDFREAYAWLSHNTEVDDKVASWWDYGYQTTAM 593

Query: 597 ANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINK 656
           ANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINK
Sbjct: 594 ANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINK 653

Query: 657 FLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRV 716
           FLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGK FDRV
Sbjct: 654 FLWMVRIGGGVFPHIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKAFDRV 713

Query: 717 RRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSK 762
           R+TEIGKKYFKLTHFEEVFTTHHWMVRIYKLKP KNRIRGK KKSK
Sbjct: 714 RQTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPPKNRIRGKTKKSK 759

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255546369\|ref\|XP_002514244.1\| oligosaccharyl transferase, putative [Ricinus communis] gi\|223546700\|gb\|EEF48198.1\| oligosaccharyl transferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|225445126\|ref\|XP_002280521.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 [Vitis vinifera] gi\|297738771\|emb\|CBI28016.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356495925\|ref\|XP_003516821.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Glycine max]	Back alignment and taxonomy information

>gi\|357444875\|ref\|XP_003592715.1\| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A [Medicago truncatula] gi\|355481763\|gb\|AES62966.1\| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449465336\|ref\|XP_004150384.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449520405\|ref\|XP_004167224.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi|18419993|ref|NP_568380.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabidopsis thaliana] gi|75163845|sp|Q93ZY3.1|STT3A_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; Short=Oligosaccharyl transferase subunit STT3A; Short=STT3-A; AltName: Full=Integral membrane protein 1; AltName: Full=Protein STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A gi|15810305|gb|AAL07040.1| putative oligosaccharyl transferase STT3 [Arabidopsis thaliana] gi|332005355|gb|AED92738.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297808033\|ref\|XP_002871900.1\| hypothetical protein ARALYDRAFT_488863 [Arabidopsis lyrata subsp. lyrata] gi\|297317737\|gb\|EFH48159.1\| hypothetical protein ARALYDRAFT_488863 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15215736\|gb\|AAK91413.1\| AT5g19690/T29J13_110 [Arabidopsis thaliana] gi\|16974315\|gb\|AAL31142.1\| AT5g19690/T29J13_110 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		782
TAIR\|locus:2183149		779	STT3A "staurosporin and temper	0.942	0.946	0.773	5.4e-308
UNIPROTKB\|F6VFF2		718	STT3A "Uncharacterized protein	0.533	0.580	0.492	4.3e-182
UNIPROTKB\|Q5U4M7		705	stt3a "Itm1 protein" [Xenopus	0.533	0.591	0.488	5.5e-182
TAIR\|locus:2009051		735	STT3B "staurosporin and temper	0.562	0.598	0.466	5.5e-182
DICTYBASE\|DDB_G0285159		714	stt3 "dolichyl-diphosphooligos	0.534	0.585	0.498	7e-182
UNIPROTKB\|F1PJP5		787	STT3A "Uncharacterized protein	0.533	0.529	0.488	8.9e-182
UNIPROTKB\|F6UX38		705	STT3A "Uncharacterized protein	0.533	0.591	0.488	8.9e-182
MGI\|MGI:105124		705	Stt3a "STT3, subunit of the ol	0.533	0.591	0.488	8.9e-182
RGD\|1565793		753	Stt3a "STT3A, subunit of the o	0.533	0.553	0.488	8.9e-182
UNIPROTKB\|Q5ZLA7		705	LOC100857165 "Uncharacterized	0.533	0.591	0.488	1.1e-181

TAIR\|locus:2183149 STT3A "staurosporin and temperature sensitive 3-like A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2955 (1045.3 bits), Expect = 5.4e-308, P = 5.4e-308
 Identities = 576/745 (77%), Positives = 609/745 (81%)

Query:    12 LRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFW 71
             +R+AFGNVLS  IL+LIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFL+KNGIY+FW
Sbjct:    15 MRNAFGNVLSVLILVLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLSKNGIYEFW 74

Query:    72 NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASW 131
             NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWW LNSLNIPLSVETVCVFTAP+FSAFASW
Sbjct:    75 NWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWGLNSLNIPLSVETVCVFTAPVFSAFASW 134

Query:   132 ATYLLTKEVKXXXXXXXXXXXXXMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNT 191
             ATYLLTKEVK             MVPSYISRSVAGSYDNEAVAIFALI TFYLYIKTLNT
Sbjct:   135 ATYLLTKEVKGSGAGLAAAALLAMVPSYISRSVAGSYDNEAVAIFALIFTFYLYIKTLNT 194

Query:   192 GSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYXXXXXXXXX 251
             GSLFYATLNA+AYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYS RLYIAY         
Sbjct:   195 GSLFYATLNALAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSPRLYIAYAPLVVLGTL 254

Query:   252 XXXXXXXXXFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKXXXXXXXXXXXXX 311
                      FNAV+TSEHFASFLVFII+HVVALVYYIKGILSPKMFK             
Sbjct:   255 LAALVPVVGFNAVLTSEHFASFLVFIIIHVVALVYYIKGILSPKMFKVAVTLVVSIGMVV 314

Query:   312 XXXXXXXXXXXXXSSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV 371
                          SSPT GWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV
Sbjct:   315 CFIVVAILVALVASSPTGGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINV 374

Query:   372 LAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVFAPAACIMSGIALSQAF 431
             LAFLVPAGIIACF PLSDASSFVVLYIV SVYFSGVMVRLMLV APAACIMSGIALSQAF
Sbjct:   375 LAFLVPAGIIACFSPLSDASSFVVLYIVMSVYFSGVMVRLMLVLAPAACIMSGIALSQAF 434

Query:   432 DVFTRSIKFQLLRILGFSEADAGDGSSANVVPEND--AVKVDKSEETIXXXXXXXXXXXX 489
             DVFT SIK+QL      S  DA D +S N  P++D  A K DK EE +            
Sbjct:   435 DVFTGSIKYQL-GASSNSTDDAEDNTSTNNAPKDDVSAGKTDKGEEIVKERSSKKGKKKE 493

Query:   490 XXXXXXXXXXXTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPS 549
                         S K+K +K+ LVLP+E S++ LLLL+ +GAFYV+HCVWAAAEAYSAPS
Sbjct:   494 REPADK-----PSVKAKIKKKALVLPLEASIVALLLLIMLGAFYVIHCVWAAAEAYSAPS 548

Query:   550 IVLTSYTHEGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWN 609
             IVLTS + +GLHVFDDFRE+YAWL HNT+VDDKVASWWDYGYQTTAMANRTVIVDNNTWN
Sbjct:   549 IVLTSQSRDGLHVFDDFRESYAWLSHNTDVDDKVASWWDYGYQTTAMANRTVIVDNNTWN 608

Query:   610 NTHIATVGTAMSSPEKAAWEIFNSLDXXXXXXXXXXXXXXPSDDINKFLWMVRIGGGVFP 669
             NTHIATVGTAMSSPEKAAWEIFNSLD              PSDDINKFLWMVRIGGGVFP
Sbjct:   609 NTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLIGYPSDDINKFLWMVRIGGGVFP 668

Query:   670 HIKEPDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVETDGKGFDRVRRTEIGKKYFKLT 729
             HIKE DYLRDGQYRIDS+ATPTMLN LMYKLSYYRFVETDGKG+DRVRRTEIGKK+FKLT
Sbjct:   669 HIKEADYLRDGQYRIDSEATPTMLNSLMYKLSYYRFVETDGKGYDRVRRTEIGKKHFKLT 728

Query:   730 HFEEVFTTHHWMVRIYKLKPSKNRI 754
             HFEEVFT+HHWMVR+YKLKP +NRI
Sbjct:   729 HFEEVFTSHHWMVRLYKLKPPRNRI 753

GO:0004576 "oligosaccharyl transferase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0047484 "regulation of response to osmotic stress" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB\|F6VFF2 STT3A "Uncharacterized protein" [Monodelphis domestica (taxid:13616)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5U4M7 stt3a "Itm1 protein" [Xenopus laevis (taxid:8355)]	Back alignment and assigned GO terms

TAIR\|locus:2009051 STT3B "staurosporin and temperature sensitive 3-like b" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0285159 stt3 "dolichyl-diphosphooligosaccharide-protein glycotransferase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PJP5 STT3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F6UX38 STT3A "Uncharacterized protein" [Equus caballus (taxid:9796)]	Back alignment and assigned GO terms

MGI\|MGI:105124 Stt3a "STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1565793 Stt3a "STT3A, subunit of the oligosaccharyltransferase complex (catalytic)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZLA7 LOC100857165 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46975	STT3_CAEEL	No assigned EC number	0.4640	0.9450	0.9762	yes	no
P46977	STT3A_HUMAN	2, ., 4, ., 1, ., 1, 1, 9	0.5080	0.8631	0.9574	yes	no
P46978	STT3A_MOUSE	2, ., 4, ., 1, ., 1, 1, 9	0.5080	0.8631	0.9574	yes	no
Q2KJI2	STT3A_BOVIN	2, ., 4, ., 1, ., 1, 1, 9	0.5060	0.8644	0.9588	yes	no
Q5RCE2	STT3A_PONAB	2, ., 4, ., 1, ., 1, 1, 9	0.5080	0.8631	0.9574	yes	no
Q54NM9	STT3_DICDI	2, ., 4, ., 1, ., 1, 1, 9	0.5141	0.8529	0.9341	yes	no
Q6F2Z1	STT3A_ORYSJ	2, ., 4, ., 9, 9, ., 1, 8	0.8286	0.9910	0.9847	yes	no
O94335	STT3_SCHPO	2, ., 4, ., 1, ., 1, 1, 9	0.4420	0.8964	0.9321	yes	no
Q93ZY3	STT3A_ARATH	2, ., 4, ., 9, 9, ., 1, 8	0.8639	0.9744	0.9781	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.921
4th Layer	2.4.1.119	0.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00180745	hypothetical protein (765 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0004040902	hypothetical protein (222 aa)	•	0.899
	estExt_fgenesh4_pm.C_280064	hypothetical protein (223 aa)	•	0.899
	estExt_fgenesh4_pg.C_LG_X0451	hypothetical protein (846 aa)	•	0.900

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		782
pfam02516		650	pfam02516, STT3, Oligosaccharyl transferase STT3 s	1e-130
COG1287		773	COG1287, COG1287, Uncharacterized membrane protein	3e-76
TIGR04154		815	TIGR04154, archaeo_STT3, oligosaccharyl transferas	4e-24

>gnl\|CDD\|217079 pfam02516, STT3, Oligosaccharyl transferase STT3 subunit	Back alignment and domain information

 Score =  402 bits (1036), Expect = e-130
 Identities = 215/707 (30%), Positives = 318/707 (44%), Gaps = 78/707 (11%)

Query: 19  VLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRT 78
           +L   I  LI  +A   RLF+  +     HEFDPY+NYR+T+ L   G Y    W D   
Sbjct: 1   LLKVVIFALIAGVAIFSRLFTDTRGLPYFHEFDPYYNYRLTENLLNEGFYPGGIWDDHSA 60

Query: 79  WYPLG-RVIGGTVYPGLTLTA-GTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLL 136
           +YP G RV    + P LT+   G I+  L     P S+  VC +  P+       ATYLL
Sbjct: 61  YYPPGSRVDYPPLLPYLTMALYGIIFLFL-----PFSLREVCFWLPPVIGGLLGIATYLL 115

Query: 137 TKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIITFYLYIKTLNTGS--L 194
            +E+K   AGL AA LLA+ P Y+SR+VAG YD + +AIF  ++  + ++  + TGS  +
Sbjct: 116 VRELKNDLAGLIAAFLLAIAPGYVSRTVAGFYDTDMLAIFLPLLVLFFWLLAIKTGSNRI 175

Query: 195 FYATLNAIAYFYMVCSWGGY-TFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLA 253
            YA L  +  F M  +WGGY  F++ L  + +L  ++ GR+  +L I      ++ T++ 
Sbjct: 176 IYAVLAGLPLFLMALAWGGYQVFLLILALLFILALLIMGRFEPKLLILVGFSYLIATIVG 235

Query: 254 A--LVPVVGFNAVMTSEHFASFLVFIILHVVALV-YYIKGILSPKMFKVAVTLVVSVGLV 310
                  VGF  V +SEH  +FLVF +  ++A         LS   F+      + + L 
Sbjct: 236 GIIQYLFVGFAKVRSSEHMGAFLVFGLAQLLAFGSVVKGVYLSFYQFETLTYPGLFLVLG 295

Query: 311 VCCAVIAILVALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDIN 370
           +   V+ +L  L        W+GR  SL D   A   IP I  +SE QP    +    + 
Sbjct: 296 LIGPVLFLLGLLGF---IALWTGRFYSLFDY--AKIDIPTIILISEWQPTGLYALLAGLR 350

Query: 371 VLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVR-LMLVFAPAACIMSGIALSQ 429
            L F  P G+I C L L D + F  +Y V+ + F GVMV  +ML  AP   +++    S 
Sbjct: 351 FLIFTFPLGLIFCGLLLEDLAVFSFIYSVSQLRFLGVMVFPIMLTLAPVIALIAAYLASP 410

Query: 430 AFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETIKERPSRKNKKKE 489
            F  +                                     + E  I     R+     
Sbjct: 411 IFSTY------------------------------------LEEEAAI-----RRAAAGV 429

Query: 490 KEQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPS 549
               +    E+      T +  +V  +     G     F              +  S+P 
Sbjct: 430 AAPEKNEGWERGLEWVNTNRDTVV--ITWWDYGHFFAYF-------ADRPVTFDGGSSPV 480

Query: 550 IVLTSYTHEGLHVFDDFREAYAWLRHNTEVDD-KVASWWDYGYQTTAMANRTVIVDNNTW 608
           ++ T   +  L + DD  EAY  L  N+ +D   V SWWDYG Q   +A R VI++N   
Sbjct: 481 VLGTPRGYWALTLMDDNNEAYLSLGINSMLDTSGVKSWWDYGNQILKVAKRAVILNNILG 540

Query: 609 NN-THIATVGTAMSS---PEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIG 664
            N +H A V TA S    P + A  I +  DV YVLV   G++G    DINK  W++RI 
Sbjct: 541 VNRSHAAKVLTAKSGISTPAEKALNITHPRDVGYVLVTPEGMIGIAPWDINKGDWIMRIR 600

Query: 665 GGVFPHIKE----PDYLRDGQYRIDSQATPTMLNCLMYKLSYYRFVE 707
           GG +P++K+      Y   G YR+D++A+    N L+ K+ Y   +E
Sbjct: 601 GGAYPYMKDVEEINFYNSTGLYRLDTEASEKNGNSLLVKIFYSVKLE 647

This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. Length = 650

>gnl\|CDD\|224206 COG1287, COG1287, Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|234485 TIGR04154, archaeo_STT3, oligosaccharyl transferase, archaeosortase A system-associated	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		782
KOG2292		751	consensus Oligosaccharyltransferase, STT3 subunit	100.0
PF02516		483	STT3: Oligosaccharyl transferase STT3 subunit; Int	100.0
COG1287		773	Uncharacterized membrane protein, required for N-l	100.0
TIGR03663		439	conserved hypothetical protein TIGR03663. Members	99.31
PF10034		642	Dpy19: Q-cell neuroblast polarisation; InterPro: I	98.73
TIGR03662		723	Chlor_Arch_YYY Chlor_Arch_YYY domain. Members of t	98.17
PRK13279		552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	98.04
PF02366		245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	98.01
PF13231		159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	97.85
TIGR03766		483	conserved hypothetical integral membrane protein.	97.59
PF10131		616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	97.55
COG1807		535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	97.42
KOG3359		723	consensus Dolichyl-phosphate-mannose:protein O-man	97.2
COG1287		773	Uncharacterized membrane protein, required for N-l	97.02
PLN02816		546	mannosyltransferase	96.58
PF03901		418	Glyco_transf_22: Alg9-like mannosyltransferase fam	96.08
COG1928		699	PMT1 Dolichyl-phosphate-mannose--protein O-mannosy	95.73
PF11028		178	DUF2723: Protein of unknown function (DUF2723); In	95.36
COG5305		552	Predicted membrane protein [Function unknown]	95.22
PF09586		843	YfhO: Bacterial membrane protein YfhO; InterPro: I	94.88
COG4745		556	Predicted membrane-bound mannosyltransferase [Post	94.42
KOG4587		605	consensus Predicted membrane protein [Function unk	92.58
PF09971		367	DUF2206: Predicted membrane protein (DUF2206); Int	92.35
PF04188		443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	90.94
PF11847		680	DUF3367: Domain of unknown function (DUF3367); Int	88.28
COG5617		801	Predicted integral membrane protein [Function unkn	88.1
PF09852		449	DUF2079: Predicted membrane protein (DUF2079); Int	87.35
KOG4505		467	consensus Na+/H+ antiporter [Inorganic ion transpo	83.9
PF09586		843	YfhO: Bacterial membrane protein YfhO; InterPro: I	83.44
PF09913		389	DUF2142: Predicted membrane protein (DUF2142); Int	82.07

>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

Probab=100.00  E-value=9.5e-272  Score=2175.66  Aligned_cols=720  Identities=58%  Similarity=1.017  Sum_probs=666.7

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHhhcccccccccccccchhHHHHHHHHHHhcCccccccccCCCCcccCceecCccc
Q 003973           11 TLRHAFGNVLSFFILLLIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLTKNGIYDFWNWFDDRTWYPLGRVIGGTV   90 (782)
Q Consensus        11 ~~~~~~~~ll~~~iL~li~~~af~iRl~sv~~y~~iIhEFDPwfNyR~T~yl~~~G~~~f~nWFD~~sWYPlGR~vg~T~   90 (782)
                      ...+.++++|+++||+++.++||++|||+|+||||+|||||||||||+|++|+|||||+||||||+++|||+||++|||+
T Consensus        12 ~~~~~~~~ll~~~IL~l~~v~~fssRLFaVirfESiIHEFDP~FNYR~T~~l~~~GfY~F~NWFDdRaWYPLGRiiGGTv   91 (751)
T KOG2292|consen   12 SSRKGQQTLLKLLILVLAAVLSFSSRLFAVIRFESIIHEFDPWFNYRATRFLVENGFYKFLNWFDDRAWYPLGRIIGGTV   91 (751)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhHHHHHHHHhhHHHHHhhcccccccccceeecccc
Confidence            56778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhhcCCCcccceeeeehhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhhhhhhhccccccch
Q 003973           91 YPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSAFASWATYLLTKEVKGAGAGLTAAALLAMVPSYISRSVAGSYDN  170 (782)
Q Consensus        91 YPgLm~ta~~i~~ll~~lg~~v~i~~vcv~lppvfs~lt~i~~yll~~e~~~~~aGLlAA~~iAI~PgyisRSvaG~yDn  170 (782)
                      |||||+|+++|||+|+.|++|+||||||||++|+|+++|++++|++|||+++.+|||+||+|+||+||||||||||||||
T Consensus        92 YPGLmiTsg~I~~~L~~L~i~v~Ir~VCVflAP~FSg~TsiaTY~ltkEl~~~gaGL~AA~fiaivPgYiSRSVAGSYDN  171 (751)
T KOG2292|consen   92 YPGLMITSGLIYWVLHFLNIPVHIRNVCVFLAPLFSGLTSIATYLLTKELKSAGAGLLAAAFIAIVPGYISRSVAGSYDN  171 (751)
T ss_pred             cchHHHHHHHHHHHHHHcccceeehheeeEechhhhchHHHHHHHHHHHHhcccccHHHHHHHhhCcccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHccCccchhhHHhHHHHHHH
Q 003973          171 EAVAIFALIITFYLYIKTLNTGSLFYATLNAIAYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGT  250 (782)
Q Consensus       171 E~iaif~llltfylwikalktgs~~~a~lagl~y~ymv~aWGGyvFi~nlI~l~~~vl~l~gr~s~rlyvays~~yvlgt  250 (782)
                      |+||||++++|||||+||+||||++|+.+||++|||||+|||||+||+|+||||+++|+++||||+|+|+||+++|++||
T Consensus       172 E~IAIfal~~T~ylwiKavkTGSifwa~~~aL~YFYMVsaWGGYvFiiNLIPLHVlvlllmGRyS~rlyiaY~t~y~lGt  251 (751)
T KOG2292|consen  172 EGIAIFALLFTYYLWIKAVKTGSIFWAACCALAYFYMVSAWGGYVFIINLIPLHVLVLLLMGRYSSRLYIAYTTFYCLGT  251 (751)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhheeeccceEEEEechHHHHHHHHHhcccccceeeehhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccccceeeccchHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 003973          251 LLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGILSPKMFKVAVTLVVSVGLVVCCAVIAILVALVASSPTKG  330 (782)
Q Consensus       251 ll~~~iP~vGf~p~~s~e~~~al~vf~ll~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~p  330 (782)
                      +++||||||||||++|+|||+|+|||+|+|+++|++|+|.++++++|+.+.+..+..+   .+++++++.+++.+|+++|
T Consensus       252 llsmqipfVGFqpv~tsEHmaa~gVF~L~qi~Af~~y~k~~ls~~~F~~l~~~~v~~~---~~~~~vv~~~Lt~~g~iaP  328 (751)
T KOG2292|consen  252 LLSMQIPFVGFQPVRTSEHMAALGVFGLLQIVAFVDYLKGRLSPKQFQVLFRLVVSLV---GVVVFVVVAALTATGYIAP  328 (751)
T ss_pred             HHHccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcceecc
Confidence            9999999999999999999999999999999999999999999999999999877665   6677777888999999999


Q ss_pred             CchhhhhccCcccccccCCccccccccCCCChhhHHHhhHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Q 003973          331 WSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFLPLSDASSFVVLYIVTSVYFSGVMVR  410 (782)
Q Consensus       331 ~sgR~~sl~~p~yak~~~PivaSVsEHqPt~w~sff~dl~~l~~~~p~Gl~~~~~~~~d~~~Flily~v~a~Yfa~~mvR  410 (782)
                      |||||||||||+|||+||||||||||||||+|+|||||+|++++++|+|+|+||++++||++|+++|+|+++|||++|||
T Consensus       329 WtGRfySL~D~~YAK~hIPIIASVSEHQPttW~SfffDlhiLv~lfPaGl~~Cfk~l~De~vFiilY~v~~~YFaGVMVR  408 (751)
T KOG2292|consen  329 WTGRFYSLWDTGYAKIHIPIIASVSEHQPTTWSSFFFDLHILVFLFPAGLYYCFKNLSDERVFIILYGVTSVYFAGVMVR  408 (751)
T ss_pred             cccceeeccCCcchhcccceEEeccccCCCchHHHHHHHHHHHHhhhhhHHHhhhhcCCceEEEEehHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccCCcCCCCCCCCCCCCccccccccchhhhhccccccchhhHH
Q 003973          411 LMLVFAPAACIMSGIALSQAFDVFTRSIKFQLLRILGFSEADAGDGSSANVVPENDAVKVDKSEETIKERPSRKNKKKEK  490 (782)
Q Consensus       411 L~l~laP~v~ilagi~is~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  490 (782)
                      |||+++|++|+++||++|.++|.+++.   .+.+..    .+     +.+++.++|+    +|....+.+    .+++.+
T Consensus       409 LmLtLtP~vCils~ia~S~~~~~y~~~---~~~~~~----~~-----~~~~~~~~d~----~k~~~vk~~----~~~~~~  468 (751)
T KOG2292|consen  409 LMLTLTPVVCILSGIAFSQLLDTYLKS---DDTKRE----KS-----SISSASAEDE----KKAGKVKSR----SKKQGK  468 (751)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHhcc---chhccc----cc-----CCCccccccc----hhhhhhhhh----hhhccc
Confidence            999999999999999999999999874   211100    00     0000111111    110001110    000100


Q ss_pred             HHHHHHHHhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHhHhhhHhhhhhcccCCcEEEEeccCCC-cccchhHHHH
Q 003973          491 EQMEKAQAEKTSAKSKTEKRLLVLPMELSVIGLLLLVFMGAFYVVHCVWAAAEAYSAPSIVLTSYTHEG-LHVFDDFREA  569 (782)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~l~~~~~h~~~~~~~aySsPsivl~s~~~~G-~~i~DD~reA  569 (782)
                      +                .   +.++.+++.++++.+++++++|++||+|+|+|||||||||++++++|| ++|.||||||
T Consensus       469 ~----------------~---~~~~~~~~~~~~~~~~~~l~~f~~H~tWvTs~AYSsPSiVL~s~~~dg~r~i~DDFREA  529 (751)
T KOG2292|consen  469 Q----------------T---EGVSLNVASIVILVMAMLLIMFVVHCTWVTSEAYSSPSIVLSSRGNDGSRIIFDDFREA  529 (751)
T ss_pred             c----------------c---cCcchhhHHHHHHHHHHHHHHHHheeeeeeccccCCCcEEEEeecCCCCeeeehhhHHH
Confidence            0                0   245566777888888888999999999999999999999999999999 9999999999


Q ss_pred             HHHHhhcCCCCCeeeeeccccceeeecccccccccCCCCcchhHhHHhhhhCCCHHHHHHHHhhcCCCEEEEEeCCccCC
Q 003973          570 YAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGY  649 (782)
Q Consensus       570 y~WLr~NTp~da~VmSWWDYGYqIt~manRttlvDNNTwN~thIa~vGk~laS~E~~A~~Ilr~ldvdYVLVifGg~~gy  649 (782)
                      |+|||+|||+|+||||||||||||++|||||||||||||||||||+|||+|+||||+||||||+||||||||||||++||
T Consensus       530 Y~WLr~NT~~DakvmsWWDYGYQI~gMAnRTtlVDNNTWNNtHIa~VGkAMsS~EekayeImr~lDVdYVLVIFGG~iGY  609 (751)
T KOG2292|consen  530 YYWLRQNTPEDAKVMSWWDYGYQIAGMANRTTLVDNNTWNNTHIATVGKAMSSPEEKAYEIMRELDVDYVLVIFGGLIGY  609 (751)
T ss_pred             HHHHHhCCcccchhhhhhhccchhhhcccceEEeecCcccchHHHHHHhhcCCcHHHHHHHHHHcCCCEEEEEecccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhHHHHHHhcCCCCC-CCCCCCccc-CCccccCCCCCHhHHHHHhhhhhhccccc-----CCCcccccccceecc
Q 003973          650 PSDDINKFLWMVRIGGGVFP-HIKEPDYLR-DGQYRIDSQATPTMLNCLMYKLSYYRFVE-----TDGKGFDRVRRTEIG  722 (782)
Q Consensus       650 sgdDinKflWMvRIa~~~~p-~i~e~dy~~-~g~y~vd~~~s~~m~~sLmYkl~yy~f~~-----~~~~g~D~~r~~~i~  722 (782)
                      ||||||||+||+|||+|+|| ||+|+|||+ +||||||+++||+|+||||||||||||+|     ++++||||+||+|||
T Consensus       610 ssDDINKFLWMvRI~~g~~p~~IkE~dy~t~~GEfRvD~~asptmlNcLmYKmsYyrfge~~~~~~~~~GyDR~R~~eIg  689 (751)
T KOG2292|consen  610 SSDDINKFLWMVRIGGGEHPKHIKERDYFTPTGEFRVDAEASPTMLNCLMYKMSYYRFGELYTEFNGPPGYDRVRNAEIG  689 (751)
T ss_pred             CcchhhhhheeeeecCCcChhhcccccccCCCCceecCCCCCHHHHHHHHHHHHhhhhhhhccccCCCCCcchhhhhhcC
Confidence            99999999999999999999 999999999 89999999999999999999999999999     789999999999999


Q ss_pred             ccCCCCCcceeeeeccCcEEEEEEecCCCccccccccccCCCCCCCCccccCCcCCCC
Q 003973          723 KKYFKLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSRTSTPSSKRSGSRKKNP  780 (782)
Q Consensus       723 ~~~~~l~~~ee~ftS~~w~VRiykvk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  780 (782)
                      +||++|+|||||||||||+|||||||||+       +.++|. +++++.+++++||||
T Consensus       690 ~Kd~~L~~~EEayTtehwlVRiYkvK~p~-------~~~~r~-~~~~~~~s~~~k~~r  739 (751)
T KOG2292|consen  690 NKDFKLDHLEEAYTTEHWLVRIYKVKKPN-------RGLGRT-LPAVKLKSKKSKKKR  739 (751)
T ss_pred             CCCCCchhhhhhhcccceEEEEEEecCcc-------cccccc-ccccchhhccccccc
Confidence            99999999999999999999999999994       126676 888888887665444

>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells	Back alignment and domain information

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>TIGR03663 conserved hypothetical protein TIGR03663	Back alignment and domain information

>PF10034 Dpy19: Q-cell neuroblast polarisation; InterPro: IPR018732 This entry represents the Dpy-19 protein from Caenorhabditis elegans and its homologues in other Metazoa, including mammals	Back alignment and domain information

>TIGR03662 Chlor_Arch_YYY Chlor_Arch_YYY domain	Back alignment and domain information

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional	Back alignment and domain information

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

>TIGR03766 conserved hypothetical integral membrane protein	Back alignment and domain information

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein	Back alignment and domain information

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>PLN02816 mannosyltransferase	Back alignment and domain information

>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2	Back alignment and domain information

>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria	Back alignment and domain information

>COG5305 Predicted membrane protein [Function unknown]	Back alignment and domain information

>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []	Back alignment and domain information

>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG4587 consensus Predicted membrane protein [Function unknown]	Back alignment and domain information

>PF09971 DUF2206: Predicted membrane protein (DUF2206); InterPro: IPR018701 This family of predicted membrane proteins from archaea has no known function	Back alignment and domain information

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface	Back alignment and domain information

>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised	Back alignment and domain information

>COG5617 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64	Back alignment and domain information

>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []	Back alignment and domain information

>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		782
2lgz_A		273	Solution Structure Of Stt3p Length = 273		9e-53

>pdb|2LGZ|A Chain A, Solution Structure Of Stt3p Length = 273

Back alignment and structure

Iteration: 1

Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 6/219 (2%) Query: 536 HCVWAAAEAYSAPSIVLTSYTHEG-LHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTT 594 H W AYS+PS+VL S T +G L + DDFREAY WLR N++ D KVA+WWDYGYQ Sbjct: 20 HSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQIG 79 Query: 595 AMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDXXXXXXXXXXXXXXPSDDI 654 MA+RT +VDNNTWNNTHIA VG A +SPE+ ++EI D DDI Sbjct: 80 GMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGDDI 139 Query: 655 NKFLWMVRIGGGVFP-HIKEPD-YLRDGQYRIDSQATPTMLNCLMYKLSYYRFVE--TDG 710 NKFLW +RI G++P IKE D Y +G+YR+D++A+ TM N L+YK+SY F + G Sbjct: 140 NKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQLFNGG 199 Query: 711 KGFDRVRRTEIGK-KYFKLTHFEEVFTTHHWMVRIYKLK 748 + DRVR+ I L +F+EVFT+ +W VRIY+LK Sbjct: 200 QATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLK 238

PyMOL of 2lgz

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		782
2lgz_A		273	Dolichyl-diphosphooligosaccharide--protein glycosy	1e-93
3rce_A		724	Oligosaccharide transferase to N-glycosylate PROT;	1e-48
3vgp_A		164	Transmembrane oligosaccharyl transferase, putativ;	1e-43
2zai_A		497	Oligosaccharyl transferase STT3 subunit related P;	2e-38
3aag_A		291	General glycosylation pathway protein; multidomain	6e-09

>2lgz_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3; catalytic domain, oligosaccharyl transferase; NMR {Saccharomyces cerevisiae} Length = 273	Back alignment and structure

 Score =  292 bits (748), Expect = 1e-93
 Identities = 124/255 (48%), Positives = 166/255 (65%), Gaps = 8/255 (3%)

Query: 532 FYVVHCVWAAAEAYSAPSIVLTSYTHEG-LHVFDDFREAYAWLRHNTEVDDKVASWWDYG 590
               H  W    AYS+PS+VL S T +G L + DDFREAY WLR N++ D KVA+WWDYG
Sbjct: 16  PRGSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYG 75

Query: 591 YQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYP 650
           YQ   MA+RT +VDNNTWNNTHIA VG A +SPE+ ++EI    DV YVLV+FGGL+G+ 
Sbjct: 76  YQIGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFG 135

Query: 651 SDDINKFLWMVRIGGGVFP-HIKEPDYL-RDGQYRIDSQATPTMLNCLMYKLSYYRFVE- 707
            DDINKFLW +RI  G++P  IKE D+   +G+YR+D++A+ TM N L+YK+SY  F + 
Sbjct: 136 GDDINKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQL 195

Query: 708 -TDGKGFDRVRRTEIGKKYF-KLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSRT 765
              G+  DRVR+  I       L +F+EVFT+ +W VRIY+LK      +G+  +     
Sbjct: 196 FNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDA--QGRTLRDVGEL 253

Query: 766 STPSSKRSGSRKKNP 780
           +  S+K   S K+  
Sbjct: 254 TRSSTKTRRSIKRPE 268

PyMOL of 2lgz

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari} Length = 724	Back alignment and structure

>3vgp_A Transmembrane oligosaccharyl transferase, putativ; glycosyltransferase, cell membrane; 1.75A {Archaeoglobus fulgidus} Length = 164	Back alignment and structure

>2zai_A Oligosaccharyl transferase STT3 subunit related P; multi-domain proteins (alpha and beta); 2.70A {Pyrococcus furiosus} PDB: 2zag_A Length = 497	Back alignment and structure

>3aag_A General glycosylation pathway protein; multidomain, transferase; HET: MLY; 2.80A {Campylobacter jejuni} Length = 291	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		782
2lgz_A		273	Dolichyl-diphosphooligosaccharide--protein glycosy	100.0
3rce_A		724	Oligosaccharide transferase to N-glycosylate PROT;	100.0
3vgp_A		164	Transmembrane oligosaccharyl transferase, putativ;	100.0
3aag_A		291	General glycosylation pathway protein; multidomain	99.96
2zai_A		497	Oligosaccharyl transferase STT3 subunit related P;	99.96

>2lgz_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3; catalytic domain, oligosaccharyl transferase; NMR {Saccharomyces cerevisiae}	Back alignment and structure

Probab=100.00  E-value=4.5e-90  Score=713.13  Aligned_cols=235  Identities=51%  Similarity=0.900  Sum_probs=228.1

Q ss_pred             HHhHhhhHhhhhhcccCCcEEEEeccCCC-cccchhHHHHHHHHhhcCCCCCeeeeeccccceeeecccccccccCCCCc
Q 003973          531 AFYVVHCVWAAAEAYSAPSIVLTSYTHEG-LHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWN  609 (782)
Q Consensus       531 ~~~~~h~~~~~~~aySsPsivl~s~~~~G-~~i~DD~reAy~WLr~NTp~da~VmSWWDYGYqIt~manRttlvDNNTwN  609 (782)
                      +.|+.||+|+++++||+|+|++++++++| +.++|||+|||+|||+|||+|++|||||||||||+++|||+|++||||||
T Consensus        15 ~~~~~h~~w~~s~ays~Psiv~~~~~~~G~~~i~dDw~eAL~WLr~NTp~da~VmSWWDYGY~It~~A~R~tlaDG~t~n   94 (273)
T 2lgz_A           15 VPRGSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQIGGMADRTTLVDNNTWN   94 (273)
Confidence            46889999999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             chhHhHHhhhhCCCHHHHHHHHhhcCCCEEEEEeCCccCCCCCchhhHHHHHHhcCCCCC-CCCCCCccc-CCccccCCC
Q 003973          610 NTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFP-HIKEPDYLR-DGQYRIDSQ  687 (782)
Q Consensus       610 ~thIa~vGk~laS~E~~A~~Ilr~ldvdYVLVifGg~~gysgdDinKflWMvRIa~~~~p-~i~e~dy~~-~g~y~vd~~  687 (782)
                      ++||+.+|++|+|||++|++|+|+|+||||||++||++||++||||||+||+|||++++| +|+|.||++ +|+|+||.+
T Consensus        95 ~t~i~~vg~aftSsE~~A~~Ilr~L~vdYVlv~~gg~~gys~dDi~Kf~wM~rIa~~~~~~~I~e~dy~~~~g~~~v~~~  174 (273)
T 2lgz_A           95 NTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGDDINKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDAR  174 (273)
Confidence            999999999999999999999999999999999999999999999999999999999999 899999999 999999999


Q ss_pred             CCHhHHHHHhhhhhhccccc--CCCcccccccceeccccC-CCCCcceeeeeccCcEEEEEEecCCCccccccccccCCC
Q 003973          688 ATPTMLNCLMYKLSYYRFVE--TDGKGFDRVRRTEIGKKY-FKLTHFEEVFTTHHWMVRIYKLKPSKNRIRGKMKKSKSR  764 (782)
Q Consensus       688 ~s~~m~~sLmYkl~yy~f~~--~~~~g~D~~r~~~i~~~~-~~l~~~ee~ftS~~w~VRiykvk~~~~~~~~~~~~~~~~  764 (782)
                      +||+|+||||||||||||++  ++++||||+||+|||+++ ++|++||||||||||+|||||||+++|        ++|+
T Consensus       175 ~s~~m~~SlmYKLsy~~f~~~~~~~~g~Dr~r~~~i~~~~~~~l~~feEvfTS~~wlVRIYkV~~~~~--------~~~~  246 (273)
T 2lgz_A          175 ASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDA--------QGRT  246 (273)
Confidence            99999999999999999998  778899999999999999 899999999999999999999999999        7777


Q ss_pred             CCCCCccccC
Q 003973          765 TSTPSSKRSG  774 (782)
Q Consensus       765 ~~~~~~~~~~  774 (782)
                       +.++..+++
T Consensus       247 -~~~~~~~~~  255 (273)
T 2lgz_A          247 -LRDVGELTR  255 (273)
Confidence             888777776

PyMOL of 2lgz

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari}	Back alignment and structure

>3vgp_A Transmembrane oligosaccharyl transferase, putativ; glycosyltransferase, cell membrane; 1.75A {Archaeoglobus fulgidus}	Back alignment and structure

>3aag_A General glycosylation pathway protein; multidomain, transferase; HET: MLY; 2.80A {Campylobacter jejuni}	Back alignment and structure

>2zai_A Oligosaccharyl transferase STT3 subunit related P; multi-domain proteins (alpha and beta); 2.70A {Pyrococcus furiosus} PDB: 2zag_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00