Citrus Sinensis ID: 004546

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
ccccccccHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccEEEccccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEccccccccccccccHHHHHccccccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHccccccEEEEcccccccEEEEHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccEEEEccEEEEEEEcccccEEEEEEccccccccccccccEEEccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEEEEccccccEEEEEEEEEccccccccEEEEEEccccccccEEccccccccccccHHHHcccccEEEEEcccccccccc
ccccccccHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHcccEEEEcHHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHccccccccccccccccHHHHHccccccccccccHHHHccccccccccccccccccEEEcccccEccccHHHHHHHHHHHHcccEEEEccccccccEEEEcccHHEEEEHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccEEEEEEEcccccccccEEEEcccccHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHcccccccEEEEEEEEccEEEEcHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccEEEEEccEEEEEEccccccEEEEEEccccccccccccccEEEcccEEEEEEcHHcccccccccEEcccccEEEEEEcEEEEEEEEEEEcccccEEEEEEEEccccccccEEEEEEEccccccccEEcccccHHHccccEEEEEEEEEEEEEEcccccccccc
mvgvskgdKSEILELFLKIglddrtakntiannkvTANLTAVIHEAAVTDGCERRIGNLLYTVatkyptnalvhrpTLLLYIVSSKIKTPAQLEAAFSFFAstgsenfevdefeeacgvgvevssedIELTVNEVFEENKNTILELRYRTNVGDLFAHVrkrlpwadpkIVKQLIDARMYELLGERTAADIEKLSKKKEKkekkekpekdedkkfandapvqlpeedlfpisnfpppeenykvhteipfsdgsvliccnTKEVLDKHlevtggnvltrfppepngylhighakAMFVDFglakerggycylryddtnpeaekKEYIDHIEEIVQWmgwepfkityTSDYFQELYELAVELIRRGhayvdhqtpEEIKEYREKKmnspwrdrpiaESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRikftphphagdkwciypsydyahcIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNkyvdgwddpclmtlaglrrrgvtstSINAFVQGigisrsdslIRLDRLEYHIREELnktaprtmvVLNPLKVVITNMesgtimhldakrwpdaqaddasafykvpfsnvvyiehsdfrmkdskdyyglapgksvLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkpkVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIelcctgssslgc
mvgvskgdkseILELFLKiglddrtakntiannkvtanlTAVIHEAAVTDGCERRIGNLLYTVATkyptnalvhRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHvrkrlpwadpkIVKQLIDARMYELLGertaadieklskkkekkekkekpekdedkkfandapvqlpeedLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHayvdhqtpeeikeyrekkmnspwrdrpIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTnkyvdgwddPCLMTLAGLRRRGVTSTSinafvqgigisrsdsliRLDRLEYHIReelnktaprtmvvLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIeklskkkekkekkekpekdedkkFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
***********ILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGE*******************************************************YKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDH*****************************************************DNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCT*******
**************LFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLG*******************************************************************GSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTP*****************RPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
********KSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEKLS*******************FANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
********KSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERT***********************************L*EEDLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGS*****
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MVGVSKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLxxxxxxxxxxxxxxxxxxxxxEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFISCHAGICCLNVAAGSVLENRVSILHIFGLFNFKIELCCTGSSSLGC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query745 2.2.26 [Sep-21-2011]
P52780794 Glutamine--tRNA ligase OS N/A no 0.922 0.865 0.781 0.0
P14325779 Probable glutamine--tRNA yes no 0.908 0.869 0.491 0.0
Q9Y105778 Probable glutamine--tRNA yes no 0.897 0.859 0.422 1e-152
P47897775 Glutamine--tRNA ligase OS yes no 0.842 0.810 0.439 1e-147
Q3MHH4775 Glutamine--tRNA ligase OS yes no 0.893 0.859 0.419 1e-146
O62431786 Probable glutamine--tRNA yes no 0.891 0.844 0.411 1e-145
Q9Y7Y8811 Probable glutamine--tRNA yes no 0.893 0.821 0.421 1e-142
P13188809 Glutamine--tRNA ligase OS yes no 0.893 0.823 0.386 1e-130
A7MT45556 Glutamine--tRNA ligase OS yes no 0.591 0.793 0.470 1e-112
Q87RG4556 Glutamine--tRNA ligase OS yes no 0.566 0.758 0.484 1e-111
>sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase OS=Lupinus luteus PE=2 SV=2 Back     alignment and function desciption
 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/700 (78%), Positives = 619/700 (88%), Gaps = 13/700 (1%)

Query: 5   SKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVA 64
           +  DK + LELFLKIGLD+RTAKNT+ANNKVT NLT+VI++A VTDGC R +GNLLYTVA
Sbjct: 7   TSSDKEKSLELFLKIGLDERTAKNTVANNKVTTNLTSVINDAGVTDGCSRTVGNLLYTVA 66

Query: 65  TKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVS 124
           TKYP NAL HRPTLL YIV+SK+KT AQL+AA SF ++TGSEN ++++FEEACGVGVEVS
Sbjct: 67  TKYPANALPHRPTLLQYIVNSKVKTTAQLDAALSFLSATGSENLDLNKFEEACGVGVEVS 126

Query: 125 SEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLG 184
           +EDI+  V+EV EENK TILELRYR NVG+L  HVRKRLPWAD K+VKQL+DA++YE+LG
Sbjct: 127 TEDIKHAVDEVVEENKATILELRYRVNVGELLGHVRKRLPWADAKVVKQLVDAKLYEILG 186

Query: 185 ERTAAD---IEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENY 241
           +RTAAD    +K  +K  K E K  P    +K           EEDL P   FP PE+N+
Sbjct: 187 DRTAADNEKPKKKKEKPAKVEDKAAPVATSEKPL---------EEDLNPYLIFPNPEDNF 237

Query: 242 KVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGL 301
           KVHTE+PFSDG++L CCNTK +L+KHL+ TGG VLTRFPPEPNGYLHIGHAKAMFVDFGL
Sbjct: 238 KVHTEVPFSDGNILRCCNTKALLEKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFVDFGL 297

Query: 302 AKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELI 361
           AK+R G CYLR+DDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTS+YFQELYE AVELI
Sbjct: 298 AKDRNGGCYLRFDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSNYFQELYEFAVELI 357

Query: 362 RRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDM 421
           RRGHAYVDHQT +EIKEYREKK+NSPWRDRPI+ESLKLFEDMR G IEEGKATLRMKQDM
Sbjct: 358 RRGHAYVDHQTADEIKEYREKKLNSPWRDRPISESLKLFEDMRRGFIEEGKATLRMKQDM 417

Query: 422 QNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRA 481
           Q+DN+NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIEN+THSLCTLEFETRRA
Sbjct: 418 QSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENVTHSLCTLEFETRRA 477

Query: 482 SYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRR 541
           SY+WLLHALG+YQPYVWEYSRLNVSNTVMSKRKLN LVT K+VDGWDDP LMTLAGLRRR
Sbjct: 478 SYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRR 537

Query: 542 GVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES 600
           G+T T+INAFV+G+GI+RSD +LI ++RLEYH+REELNKTAPR MVVL+PLKVVITN+E+
Sbjct: 538 GMTPTAINAFVRGMGITRSDGTLISVERLEYHVREELNKTAPRAMVVLHPLKVVITNLEA 597

Query: 601 GTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYA 660
            + + +DAK+WPDAQADDASAFYK+PFSNVVYIE SDFRM+DSKDYYGLAPGKSV+LRYA
Sbjct: 598 KSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRYA 657

Query: 661 FPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFIS 700
           FPIKCTEVIL+DD ETIL IRAEYDPSKKTKPK  L ++S
Sbjct: 658 FPIKCTEVILADDNETILEIRAEYDPSKKTKPKGVLHWVS 697

Lupinus luteus (taxid: 3873)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS PE=2 SV=2 Back     alignment and function description
>sp|Q9Y105|SYQ_DROME Probable glutamine--tRNA ligase OS=Drosophila melanogaster GN=Aats-gln PE=1 SV=1 Back     alignment and function description
>sp|P47897|SYQ_HUMAN Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=1 SV=1 Back     alignment and function description
>sp|Q3MHH4|SYQ_BOVIN Glutamine--tRNA ligase OS=Bos taurus GN=QARS PE=2 SV=1 Back     alignment and function description
>sp|O62431|SYQ_CAEEL Probable glutamine--tRNA ligase OS=Caenorhabditis elegans GN=ers-1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y7Y8|SYQ_SCHPO Probable glutamine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qrs1 PE=3 SV=1 Back     alignment and function description
>sp|P13188|SYQ_YEAST Glutamine--tRNA ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLN4 PE=1 SV=2 Back     alignment and function description
>sp|A7MT45|SYQ_VIBHB Glutamine--tRNA ligase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|Q87RG4|SYQ_VIBPA Glutamine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=glnS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
255572104793 glutaminyl-tRNA synthetase, putative [Ri 0.915 0.860 0.833 0.0
356536302794 PREDICTED: glutaminyl-tRNA synthetase-li 0.923 0.866 0.801 0.0
225453336790 PREDICTED: glutaminyl-tRNA synthetase [V 0.916 0.864 0.826 0.0
224101753786 predicted protein [Populus trichocarpa] 0.907 0.860 0.820 0.0
225424021791 PREDICTED: glutaminyl-tRNA synthetase is 0.926 0.872 0.794 0.0
356536304801 PREDICTED: glutaminyl-tRNA synthetase-li 0.924 0.860 0.782 0.0
3915866794 RecName: Full=Glutamine--tRNA ligase; Al 0.922 0.865 0.781 0.0
449462224794 PREDICTED: glutamine--tRNA ligase-like [ 0.936 0.879 0.787 0.0
357444721804 Glutaminyl-tRNA synthetase [Medicago tru 0.928 0.860 0.783 0.0
449515581794 PREDICTED: LOW QUALITY PROTEIN: glutamin 0.936 0.879 0.787 0.0
>gi|255572104|ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] gi|223533627|gb|EEF35364.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1199 bits (3103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/689 (83%), Positives = 631/689 (91%), Gaps = 7/689 (1%)

Query: 13  LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNAL 72
           LELFLKIGLD+RTAKNTIANNKVT NLT VIHEA V +GC R +GNLLYTVATKYPTNAL
Sbjct: 14  LELFLKIGLDERTAKNTIANNKVTNNLTTVIHEAGVNEGCSRTVGNLLYTVATKYPTNAL 73

Query: 73  VHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 132
           VHRP LL YIVSSKIKT AQLEAAFSF ++T SE+F++++FEEACGVGVEVS++DIE   
Sbjct: 74  VHRPALLEYIVSSKIKTSAQLEAAFSFLSNTASESFKLNDFEEACGVGVEVSADDIEKAA 133

Query: 133 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 192
           NEVFE+NK +ILELRYRTNVGDLF HVR RLPWADPKIVKQLIDA+++ELLGERTAAD E
Sbjct: 134 NEVFEQNKVSILELRYRTNVGDLFGHVRNRLPWADPKIVKQLIDAKLFELLGERTAADNE 193

Query: 193 KLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDG 252
           K SK     +KKEKP K ++KK A D PVQ  EEDL P   FP P+EN+KVHTEI FSD 
Sbjct: 194 KPSK-----QKKEKPAKVQEKKVA-DCPVQPSEEDLNPFLIFPNPDENFKVHTEILFSDK 247

Query: 253 SVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLR 312
           S+L CCNTKE+LDKHL+ TGG V TRFPPEPNGYLHIGHAKAMFV FGLAKERGG CYLR
Sbjct: 248 SILRCCNTKEMLDKHLKETGGKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKERGGCCYLR 307

Query: 313 YDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQT 372
           YDDTNPEAEK+EYIDHIEEIV+WMGW+PFKITYTSDYFQ+LY+LAVELIRRGHAYVDHQT
Sbjct: 308 YDDTNPEAEKREYIDHIEEIVEWMGWKPFKITYTSDYFQDLYDLAVELIRRGHAYVDHQT 367

Query: 373 PEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLI 432
           P+EIKEYREKKMNSPWRDRPIAESLKLF++MR G IEEGKATLRMKQDMQ+DNFNMYDLI
Sbjct: 368 PDEIKEYREKKMNSPWRDRPIAESLKLFDEMRQGMIEEGKATLRMKQDMQSDNFNMYDLI 427

Query: 433 AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL 492
           AYRIKFTPHPH+GDKWCIYPSYDYAHCIVDS+ENITHSLCTLEFETRRASY+WLLHALG+
Sbjct: 428 AYRIKFTPHPHSGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLHALGV 487

Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
           YQPYVWEYSRLNV+NTVMSKRKLNFLVT  YVDGWDDP LMTLAGLRRRGVT+T+INAFV
Sbjct: 488 YQPYVWEYSRLNVANTVMSKRKLNFLVTKNYVDGWDDPRLMTLAGLRRRGVTATAINAFV 547

Query: 553 QGIGISRSDS-LIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW 611
           +GIGI+RSDS LIRLDRLE+HIREELN+TAPRTMVVL+PLKVVITN+E G+IM L+AK+W
Sbjct: 548 RGIGITRSDSTLIRLDRLEHHIREELNRTAPRTMVVLHPLKVVITNLEPGSIMDLEAKKW 607

Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
           PDAQ DDASAFYKVPFSNVVYIE+SDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEV+L+
Sbjct: 608 PDAQTDDASAFYKVPFSNVVYIENSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVVLA 667

Query: 672 DDKETILHIRAEYDPSKKTKPKVFLSFIS 700
           DD ETI+ IRAEYDPSKKTKPK  L +++
Sbjct: 668 DDNETIIEIRAEYDPSKKTKPKGVLHWVA 696

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356536302|ref|XP_003536678.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|225453336|ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis vinifera] gi|297734636|emb|CBI16687.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101753|ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|222852227|gb|EEE89774.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424021|ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isoform 1 [Vitis vinifera] gi|297737799|emb|CBI27000.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536304|ref|XP_003536679.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|3915866|sp|P52780.2|SYQ_LUPLU RecName: Full=Glutamine--tRNA ligase; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS gi|2995455|emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] Back     alignment and taxonomy information
>gi|449462224|ref|XP_004148841.1| PREDICTED: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357444721|ref|XP_003592638.1| Glutaminyl-tRNA synthetase [Medicago truncatula] gi|355481686|gb|AES62889.1| Glutaminyl-tRNA synthetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449515581|ref|XP_004164827.1| PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
DICTYBASE|DDB_G0289481779 glnS "glutamine-tRNA ligase" [ 0.910 0.870 0.487 2.4e-172
ZFIN|ZDB-GENE-040426-1011797 qars "glutaminyl-tRNA syntheta 0.904 0.845 0.442 3.5e-146
FB|FBgn0027090778 Aats-gln "Glutaminyl-tRNA synt 0.900 0.862 0.415 2.4e-138
POMBASE|SPBC342.02811 qrs1 "cytoplasmic glutaminyl-t 0.582 0.535 0.486 5.9e-135
UNIPROTKB|E2QRQ8775 QARS "Uncharacterized protein" 0.896 0.861 0.418 1.6e-134
WB|WBGene00001336786 qars-1 [Caenorhabditis elegans 0.897 0.851 0.407 5.4e-134
RGD|1359448775 Qars "glutaminyl-tRNA syntheta 0.896 0.861 0.419 2.3e-133
UNIPROTKB|P47897775 QARS "Glutamine--tRNA ligase" 0.895 0.860 0.417 7.9e-133
UNIPROTKB|Q3MHH4775 QARS "Glutamine--tRNA ligase" 0.896 0.861 0.416 1e-132
UNIPROTKB|F1MTC2774 QARS "Glutamine--tRNA ligase" 0.895 0.861 0.409 6.1e-126
DICTYBASE|DDB_G0289481 glnS "glutamine-tRNA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 1675 (594.7 bits), Expect = 2.4e-172, P = 2.4e-172
 Identities = 341/699 (48%), Positives = 453/699 (64%)

Query:     8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKY 67
             +K E++ LF +IGLD   AK T  N  +++NL  +I EA    GCE+ +G LLYT+ATKY
Sbjct:     8 NKDELVTLFSQIGLDSSKAKETTNNATLSSNLQEIIKEAGAESGCEKSVGLLLYTLATKY 67

Query:    68 PTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSED 127
             P NA+ HR TL+ YI + K      L+A   +   T +E   V EFE++CGVGV ++ E 
Sbjct:    68 PANAMKHRATLVDYIANKKSVNSINLQACLDYLRRTANEELNVAEFEQSCGVGVVITREQ 127

Query:   128 IELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERT 187
             +   V++   +NK+ +LE RY+ N+G +   ++  L WA+ K +K+ +DA +  LLG +T
Sbjct:   128 VAQAVSDYINKNKSDLLEKRYQFNIGGILMEIKNSLKWANAKDIKEEVDAAILSLLGPKT 187

Query:   188 AADIXXXXXXXXXXXXXXXXXXXXXXXFANDAPVQLPEEDLFPISNFPPPEENYKVHTEI 247
              AD                           D    +P E         P +E      EI
Sbjct:   188 DADKAPPAKPVKPTTPTAVATTTAATTTTGDLSPIIPAE-------LKPAKE------EI 234

Query:   248 PFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGG 307
              F D S  I  NT ++L  HL+ TGG ++TRFPPEPNGYLHIGHAKAM ++FG AK+ GG
Sbjct:   235 KFPDPSDNIQ-NTPKLLADHLKTTGGKIVTRFPPEPNGYLHIGHAKAMHLNFGYAKKNGG 293

Query:   308 YCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAY 367
              CYLR+DDTNPE E +EYID I + V+W+G EP +ITY+S  F  LYE+A ELIRRG+AY
Sbjct:   294 KCYLRFDDTNPEKENQEYIDSIIDSVKWLGHEPCEITYSSSQFDTLYEMANELIRRGYAY 353

Query:   368 VDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFN 427
             V HQT  EI E REK  +SP+R+R + E+LKLFEDMR G+ EEGKA LRMK DM++ N  
Sbjct:   354 VCHQTASEISEGREKMTDSPYRNRTVEENLKLFEDMRLGKFEEGKAILRMKGDMKHPNPC 413

Query:   428 MYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLL 487
             M DLIAYRIK+  HP +GDKWCIYPSYDY HC+VDSIENITHSLCTLEFE RR +Y WL+
Sbjct:   414 MRDLIAYRIKYHHHPMSGDKWCIYPSYDYTHCLVDSIENITHSLCTLEFEIRRLTYNWLI 473

Query:   488 HALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTS 547
               LGLY+P VWEY+RLN+++TV+SKRK+  LV NK V+GWDDP L TL   RR+G T  +
Sbjct:   474 DVLGLYRPVVWEYARLNLTHTVLSKRKIITLVQNKIVNGWDDPRLSTLNAFRRKGYTPEA 533

Query:   548 INAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHL 606
             IN     IG++R++ + I  + LE   R++L+  A R M V +P+KVVITN        +
Sbjct:   534 INLLCDTIGVTRTNGTTISYELLELCCRQDLDGKATRAMAVFDPIKVVITNYPEDKSEEI 593

Query:   607 DAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCT 666
             +A   P+  +      +K+ FS +VYIE SDFRM+D+KD++GLAPGK +LL+YA+ IKC 
Sbjct:   594 NA---PNIPSKPEKGTHKIDFSRIVYIERSDFRMEDNKDFFGLAPGKEILLKYAYNIKCE 650

Query:   667 EVIL-SDDKETILHIRAEYDPSKKTKPKVFLSFISCHAG 704
             +VI  +D K T LH+  + D S K K K  + ++S  AG
Sbjct:   651 KVIQDADGKVTELHVTYDKDNSSK-KLKT-IHWVSSVAG 687
GO:0043039 "tRNA aminoacylation" evidence=IEA
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0006425 "glutaminyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006412 "translation" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0004819 "glutamine-tRNA ligase activity" evidence=IEA;ISS
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0016874 "ligase activity" evidence=IEA
ZFIN|ZDB-GENE-040426-1011 qars "glutaminyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0027090 Aats-gln "Glutaminyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
POMBASE|SPBC342.02 qrs1 "cytoplasmic glutaminyl-tRNA ligase Qrs1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRQ8 QARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00001336 qars-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
RGD|1359448 Qars "glutaminyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P47897 QARS "Glutamine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MHH4 QARS "Glutamine--tRNA ligase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MTC2 QARS "Glutamine--tRNA ligase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P47897SYQ_HUMAN6, ., 1, ., 1, ., 1, 80.43950.84290.8103yesno
P13188SYQ_YEAST6, ., 1, ., 1, ., 1, 80.38660.89390.8232yesno
P14325SYQ_DICDI6, ., 1, ., 1, ., 1, 80.49140.90870.8690yesno
Q9Y105SYQ_DROME6, ., 1, ., 1, ., 1, 80.42240.89790.8598yesno
Q9Y7Y8SYQ_SCHPO6, ., 1, ., 1, ., 1, 80.42150.89390.8212yesno
O62431SYQ_CAEEL6, ., 1, ., 1, ., 1, 80.41120.89120.8447yesno
P52780SYQ_LUPLU6, ., 1, ., 1, ., 1, 80.78140.92210.8652N/Ano
Q3MHH4SYQ_BOVIN6, ., 1, ., 1, ., 1, 80.41970.89390.8593yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.180.979
3rd Layer6.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VIII001094
glutamine-tRNA ligase (EC-6.1.1.18) (786 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_LG_VIII001519
glutamyl-tRNA(Gln) amidotransferase (EC-6.3.5.7) (506 aa)
     •• 0.903
eugene3.00180130
hypothetical protein (141 aa)
     •  0.899
estExt_fgenesh4_pm.C_LG_X0145
glutamyl-tRNA(Gln) amidotransferase (529 aa)
     •  0.899
estExt_Genewise1_v1.C_LG_II3255
arginine-tRNA ligase (EC-6.1.1.19) (590 aa)
   •••• 0.765
grail3.0023017401
aspartate-tRNA ligase (EC-6.1.1.12) (530 aa)
   •••• 0.552
estExt_fgenesh4_pg.C_LG_IX0484
phenylalanyl-tRNA synthetase alpha chain (EC-6.1.1.20) (484 aa)
   •  • 0.478
gw1.64.262.1
aminoacyl-tRNA ligase (EC-6.1.1.5) (1028 aa)
   •••• 0.465
gw1.VII.873.1
aminoacyl-tRNA ligase (EC-6.1.1.5) (1117 aa)
   •••• 0.448
gw1.XI.1444.1
aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)
      • 0.440
estExt_Genewise1_v1.C_LG_IX0414
SubName- Full=Putative uncharacterized protein; (404 aa)
   •  • 0.408

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
PLN02859788 PLN02859, PLN02859, glutamine-tRNA ligase 0.0
PRK05347554 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Pr 0.0
PTZ00437574 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Pr 1e-180
PRK14703 771 PRK14703, PRK14703, glutaminyl-tRNA synthetase/Yqe 1e-167
TIGR00440522 TIGR00440, glnS, glutaminyl-tRNA synthetase 1e-161
pfam00749314 pfam00749, tRNA-synt_1c, tRNA synthetases class I 1e-141
COG0008472 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synth 8e-97
PLN02907722 PLN02907, PLN02907, glutamate-tRNA ligase 1e-87
TIGR00463556 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, ar 3e-85
PLN03233523 PLN03233, PLN03233, putative glutamate-tRNA ligase 7e-81
PTZ00402601 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Prov 1e-80
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 6e-79
PRK04156567 PRK04156, gltX, glutamyl-tRNA synthetase; Provisio 2e-75
pfam04558164 pfam04558, tRNA_synt_1c_R1, Glutaminyl-tRNA synthe 2e-70
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 7e-57
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 5e-24
pfam03950174 pfam03950, tRNA-synt_1c_C, tRNA synthetases class 2e-22
PRK12558445 PRK12558, PRK12558, glutamyl-tRNA synthetase; Prov 2e-20
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 1e-19
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 2e-19
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 3e-18
TIGR00464470 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, ba 8e-17
PRK14895513 PRK14895, gltX, glutamyl-tRNA synthetase; Provisio 7e-14
PRK01406476 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed 2e-12
cd00808239 cd00808, GluRS_core, catalytic core domain of disc 9e-11
PRK05710299 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetas 2e-10
PRK12410433 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthe 3e-09
PLN02627535 PLN02627, PLN02627, glutamyl-tRNA synthetase 2e-08
pfam0455783 pfam04557, tRNA_synt_1c_R2, Glutaminyl-tRNA synthe 3e-07
cd02156105 cd02156, nt_trans, nucleotidyl transferase superfa 2e-06
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 7e-06
TIGR03838271 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA 1e-04
>gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase Back     alignment and domain information 
 Score = 1384 bits (3583), Expect = 0.0
 Identities = 571/689 (82%), Positives = 620/689 (89%), Gaps = 7/689 (1%)

Query: 13  LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNAL 72
           LELFLKIGLD+RTA+N IANNKVT+NLTAVIHEA VT+GC++ +GNLLYTVATKYP NAL
Sbjct: 9   LELFLKIGLDERTARNAIANNKVTSNLTAVIHEAGVTNGCDKTVGNLLYTVATKYPANAL 68

Query: 73  VHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 132
           VHRPTLL YIVSSKIKTPAQLEAAFSFF+STG E+F++++FEEACGVGV VS EDIE  V
Sbjct: 69  VHRPTLLSYIVSSKIKTPAQLEAAFSFFSSTGPESFDLNKFEEACGVGVVVSPEDIEAAV 128

Query: 133 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 192
           NEVFEENK  ILE RYRTNVGDL   VRKRLPWADPKIVK+LID ++YELLGE+TAAD E
Sbjct: 129 NEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKKLYELLGEKTAADNE 188

Query: 193 KLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIPFSDG 252
           K  KKK     KEKP K E+KK A  A     EE+L P S FP PEEN+KVHTE+ FSDG
Sbjct: 189 KPVKKK-----KEKPAKVEEKKVA-VAAAPPSEEELNPYSIFPQPEENFKVHTEVFFSDG 242

Query: 253 SVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLR 312
           SVL   NTKE+L+KHL+ TGG V TRFPPEPNGYLHIGHAKAMFVDFGLAKERGG CYLR
Sbjct: 243 SVLRPSNTKEILEKHLKATGGKVYTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGCCYLR 302

Query: 313 YDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQT 372
           +DDTNPEAEKKEYIDHIEEIV+WMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQT
Sbjct: 303 FDDTNPEAEKKEYIDHIEEIVEWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQT 362

Query: 373 PEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLI 432
           PEEIKEYREKKMNSPWRDRPI ESLKLFEDMR G IEEGKATLRMKQDMQNDNFNMYDLI
Sbjct: 363 PEEIKEYREKKMNSPWRDRPIEESLKLFEDMRRGLIEEGKATLRMKQDMQNDNFNMYDLI 422

Query: 433 AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL 492
           AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDS+ENITHSLCTLEFETRRASY+WLL +LGL
Sbjct: 423 AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLDSLGL 482

Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
           YQPYVWEYSRLNV+NTVMSKRKLN LVT KYVDGWDDP L+TLAGLRRRGVT T+INAF 
Sbjct: 483 YQPYVWEYSRLNVTNTVMSKRKLNRLVTEKYVDGWDDPRLLTLAGLRRRGVTPTAINAFC 542

Query: 553 QGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRW 611
           +GIGI+RSD SLIR+DRLE+HIREELNKTAPRTMVVL+PLKVVITN+ESG ++ LDAKRW
Sbjct: 543 RGIGITRSDNSLIRMDRLEHHIREELNKTAPRTMVVLHPLKVVITNLESGEVIELDAKRW 602

Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
           PDAQ DD SAFYKVPFS VVYIE SDFR+KDSKDYYGLAPGKSVLLRYAFPIKCT+V+L+
Sbjct: 603 PDAQNDDPSAFYKVPFSRVVYIERSDFRLKDSKDYYGLAPGKSVLLRYAFPIKCTDVVLA 662

Query: 672 DDKETILHIRAEYDPSKKTKPKVFLSFIS 700
           DD ET++ IRAEYDP KKTKPK  L +++
Sbjct: 663 DDNETVVEIRAEYDPEKKTKPKGVLHWVA 691

Length = 788
>gnl|CDD|235424 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240418 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237793 PRK14703, PRK14703, glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|232977 TIGR00440, glnS, glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|216096 pfam00749, tRNA-synt_1c, tRNA synthetases class I (E and Q), catalytic domain Back     alignment and domain information
>gnl|CDD|223087 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215492 PLN02907, PLN02907, glutamate-tRNA ligase Back     alignment and domain information
>gnl|CDD|232985 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>gnl|CDD|178772 PLN03233, PLN03233, putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>gnl|CDD|240404 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235229 PRK04156, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|218149 pfam04558, tRNA_synt_1c_R1, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|217810 pfam03950, tRNA-synt_1c_C, tRNA synthetases class I (E and Q), anti-codon binding domain Back     alignment and domain information
>gnl|CDD|183594 PRK12558, PRK12558, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232986 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>gnl|CDD|184889 PRK14895, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234953 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173905 cd00808, GluRS_core, catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235573 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237094 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178234 PLN02627, PLN02627, glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|218148 pfam04557, tRNA_synt_1c_R2, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 Back     alignment and domain information
>gnl|CDD|173912 cd02156, nt_trans, nucleotidyl transferase superfamily Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234370 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 745
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 100.0
PLN02859788 glutamine-tRNA ligase 100.0
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 100.0
PRK05347554 glutaminyl-tRNA synthetase; Provisional 100.0
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 100.0
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 100.0
PLN03233523 putative glutamate-tRNA ligase; Provisional 100.0
PTZ00402601 glutamyl-tRNA synthetase; Provisional 100.0
PLN02907722 glutamate-tRNA ligase 100.0
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 100.0
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 100.0
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 100.0
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 100.0
PLN02627535 glutamyl-tRNA synthetase 100.0
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 100.0
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 100.0
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 100.0
PRK12558445 glutamyl-tRNA synthetase; Provisional 100.0
cd09287240 GluRS_non_core catalytic core domain of non-discri 100.0
KOG1149524 consensus Glutamyl-tRNA synthetase (mitochondrial) 100.0
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 100.0
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 100.0
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 100.0
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 100.0
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 100.0
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 100.0
cd00808239 GluRS_core catalytic core domain of discriminating 100.0
PF04558164 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-s 100.0
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.94
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.93
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.91
PF03950174 tRNA-synt_1c_C: tRNA synthetases class I (E and Q) 99.91
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.91
PLN02946557 cysteine-tRNA ligase 99.9
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.9
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.9
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.89
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.89
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.88
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 99.86
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.84
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.73
PRK11893511 methionyl-tRNA synthetase; Reviewed 99.6
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.58
PF0455784 tRNA_synt_1c_R2: Glutaminyl-tRNA synthetase, non-s 99.58
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.46
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.43
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 99.33
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.3
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.22
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.19
PRK12268556 methionyl-tRNA synthetase; Reviewed 99.17
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.16
PRK12267 648 methionyl-tRNA synthetase; Reviewed 99.15
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 99.12
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.09
PLN02224616 methionine-tRNA ligase 99.08
cd00674353 LysRS_core_class_I catalytic core domain of class 99.07
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 98.9
PRK12451562 arginyl-tRNA synthetase; Reviewed 98.88
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 98.87
PLN02610 801 probable methionyl-tRNA synthetase 98.87
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 98.87
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 98.78
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.71
PLN02286576 arginine-tRNA ligase 98.59
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 98.56
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 98.51
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 98.5
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 98.39
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.23
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 97.95
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 97.89
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 97.8
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 97.79
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 97.69
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 97.64
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 97.62
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 97.61
PLN02563 963 aminoacyl-tRNA ligase 97.56
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 97.54
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 97.52
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 97.46
PLN02943 958 aminoacyl-tRNA ligase 97.46
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 97.46
PRK08560329 tyrosyl-tRNA synthetase; Validated 97.45
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 97.42
COG2511631 GatE Archaeal Glu-tRNAGln amidotransferase subunit 97.41
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 97.39
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 97.35
PLN02843 974 isoleucyl-tRNA synthetase 97.34
PLN02486383 aminoacyl-tRNA ligase 97.29
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 97.28
PLN02381 1066 valyl-tRNA synthetase 97.24
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 97.23
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 97.2
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 97.19
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 97.16
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 97.15
PLN02882 1159 aminoacyl-tRNA ligase 97.06
TIGR00134620 gatE_arch glutamyl-tRNA(Gln) amidotransferase, sub 97.06
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 97.03
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 96.94
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 96.93
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 96.92
PRK04028630 glutamyl-tRNA(Gln) amidotransferase subunit E; Val 96.88
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 96.87
PRK13354410 tyrosyl-tRNA synthetase; Provisional 96.72
PRK05477474 gatB aspartyl/glutamyl-tRNA amidotransferase subun 96.65
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 96.65
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 96.62
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 96.62
PRK05912408 tyrosyl-tRNA synthetase; Validated 96.53
PLN02751544 glutamyl-tRNA(Gln) amidotransferase 96.38
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 96.35
TIGR00133478 gatB glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 96.16
PLN02959 1084 aminoacyl-tRNA ligase 95.99
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 95.24
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 95.18
COG0064483 GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B su 94.43
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 94.36
PLN02886389 aminoacyl-tRNA ligase 94.0
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 93.91
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 93.53
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 93.14
PF02637148 GatB_Yqey: GatB domain; InterPro: IPR018027 The Ga 93.06
PLN02943 958 aminoacyl-tRNA ligase 92.83
smart00845147 GatB_Yqey GatB domain. This domain is found in Gat 92.81
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 92.05
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 91.98
PRK13208800 valS valyl-tRNA synthetase; Reviewed 91.94
PF09424143 YqeY: Yqey-like protein; InterPro: IPR019004 Putat 91.68
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 91.14
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 90.23
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 89.38
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 89.32
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 89.25
PHA0173576 hypothetical protein 87.22
PLN02959 1084 aminoacyl-tRNA ligase 86.96
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 86.13
PLN02843 974 isoleucyl-tRNA synthetase 85.65
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 84.07
PLN02882 1159 aminoacyl-tRNA ligase 83.62
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 83.62
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 83.21
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 81.65
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 80.62
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=6.6e-198  Score=1605.68  Aligned_cols=666  Identities=55%  Similarity=0.944  Sum_probs=631.4

Q ss_pred             ChhHHHHHHHhcCCChhhHHHHhhCHHHHHHHHHHHHHcccCCCCchhhhHHHHHHHhhCCCCccCChHHHHHHHhcCCC
Q 004546            8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALVHRPTLLLYIVSSKI   87 (745)
Q Consensus         8 ~~~~~~~lf~~iGl~e~ka~e~~kn~~~~~~l~~~i~~a~~~~~~dk~~g~lly~la~~~~~~~~~~~~~~~~~I~~~~i   87 (745)
                      .|++++++|.+|||||+||+||+||++|+++|..+|.+|+++++||+++|+|||+||+++++|..+|+++|++||++|+|
T Consensus         2 ~~~dl~~~f~~lGlse~k~~etlKn~kvs~~l~~~i~~a~~~~~~~~~~g~Lly~lAt~~~~q~~~~~~llv~yI~~~~i   81 (764)
T KOG1148|consen    2 AMEDLIALFTSLGLSEKKVKETLKNKKVSANLEKIIKEADVSSGCDRTTGNLLYTLATKLKPQKLAHLPLLVSYIVNGKI   81 (764)
T ss_pred             cHHHHHHHHHHcCCCHHHHHHHHhHHHHHHHHHHHHHhcccccccccccchhHHHHHhhcCccccccchHHHHHHHhccc
Confidence            57899999999999999999999999999999999999999889999999999999999999999999999999999999


Q ss_pred             CCHHhHHHHHHHHHhcCCCCCCHHHHHHHcCCCeeeCHHHHHHHHHHHHHhhhhHHHhhccccchhhhHHHHHhhCCCCC
Q 004546           88 KTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWAD  167 (745)
Q Consensus        88 ~t~~Ql~aA~kyl~~~~~~~id~~~Fe~acGVGv~vt~e~i~~~V~~~i~~~~~~~~~~ry~~n~g~l~~~~r~~LkwAd  167 (745)
                      ||++||+||++|++++   ++|..+|+++|||||+||||||+++|.++|++|++.|+++||+||.| |++.+|+.|||||
T Consensus        82 kt~~ql~aa~~Y~~~~---~~~~~~fe~ecgvgvvvtpeqie~~V~~~i~~~k~~il~eRy~~~~g-l~~~~R~~LkwAD  157 (764)
T KOG1148|consen   82 KTELQLDAALEYVKSH---TLDKKDFEKECGVGVVVTPEQIEEAVRKYIAENKEKILEERYHFNKG-LFGDVRKELKWAD  157 (764)
T ss_pred             CchHHHHHHHHHHhcc---ccchhhhhhhcCccEEECHHHHHHHHHHHHHHhHHHHHHHHHhcchh-hHHHHHhhcCCCC
Confidence            9999999999999984   58889999999999999999999999999999999999999999999 9999999999999


Q ss_pred             hhhHHHHHHHHHHHhcCCCchhhhhhhhhhhhhhhccCCCcchhhcc-----ccCCCCCCCCccccCCCCCCCCCCCCcc
Q 004546          168 PKIVKQLIDARMYELLGERTAADIEKLSKKKEKKEKKEKPEKDEDKK-----FANDAPVQLPEEDLFPISNFPPPEENYK  242 (745)
Q Consensus       168 ~~~vk~~vd~~~~~llGpK~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~n~~  242 (745)
                      ++.||++||+++++||||||++|++++.|++++  +.++++.+.++.     ++....+++.|+|+.   +||+||||.|
T Consensus       158 ~~~vk~~iD~~~l~LlGpkte~dl~~~~k~~k~--~~~k~~~~~~~~~~~~e~~s~~~~~~~e~~~~---~~hk~gent~  232 (764)
T KOG1148|consen  158 PKSVKKEIDKEVLELLGPKTEADLEKKKKKKKA--EGEKKKTVSAKKAKNQEAASDKAPQIEELFLT---KFHKPGENTQ  232 (764)
T ss_pred             HHHHHHHHhhHHHHhcCccchhhcccccccccc--cccccccccCCCCCchhhhcccccchhhhhhh---hcccCCCCcc
Confidence            999999999999999999999999988666422  222222222111     122335688899999   9999999966


Q ss_pred             cccccccCCCccccccCcHHHHHHhhhhcCCeEEEEeCCCCCCcCchhHHHHHHHHHHHHHHcCCEEEEEeecCCcccch
Q 004546          243 VHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEK  322 (745)
Q Consensus       243 ~~~~~~~~~~~~~~~~~t~~~~~~h~~~~~g~V~tRFaPsPtG~LHIGhaRaal~n~~~Ar~~~G~~iLRidDTDp~re~  322 (745)
                                      +|+++|++||++|||+|+|||||+||||||||||+|+.+||+||+.+||.|+||||||||++|.
T Consensus       233 ----------------~t~ellk~HL~~TGGkV~TRFPPEPNG~LHIGHaKAInvNFgyAk~~~G~cyLRfDDTNPEkEe  296 (764)
T KOG1148|consen  233 ----------------HTEELLKEHLERTGGKVVTRFPPEPNGILHIGHAKAINVNFGYAKAHGGVCYLRFDDTNPEKEE  296 (764)
T ss_pred             ----------------chHHHHHHHHHhhCCeeEEeCCCCCCceeeecchhheeechhhhhhhCCeEEEecCCCCcchhh
Confidence                            5699999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCcCCCchhHHHHHHHHHHHHHcCCcccCCCCHHHHHHhhhc-cCCCCCCCCCHHHhhHHHH
Q 004546          323 KEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREK-KMNSPWRDRPIAESLKLFE  401 (745)
Q Consensus       323 ~e~~~~I~edL~wLGi~pd~i~~qSd~~~~~ye~A~~LI~~G~AY~C~cs~eel~~~R~~-~~~~~~R~~s~ee~l~~fe  401 (745)
                      ++|+++|.++++|||++|++++|+||||+++|++|.+||++|+||+|||+.|||++.|+. ..+||||+||+||||++|+
T Consensus       297 e~yf~sI~e~V~WLG~~P~kvTysSDyFdqLy~~av~LIrkG~AYVcHqt~eEik~~rg~~~~~spwRdRPieEsL~lF~  376 (764)
T KOG1148|consen  297 EEYFESIKEMVAWLGFEPYKVTYSSDYFDQLYELAVELIRKGKAYVCHQTAEEIKERRGFNERLSPWRDRPIEESLRLFE  376 (764)
T ss_pred             HHHHHHHHHHHHHhCCCceeeecchhHHHHHHHHHHHHHhcCceeEEeccHHHHHhhcCCCCCCCccccCcHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999983 3479999999999999999


Q ss_pred             HHhcCcccCCCeEEEEEecCCCCCCCCCceEEEEEecCCCCCCCCccccccccccccccccccCCcceeecCchhccchh
Q 004546          402 DMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRA  481 (745)
Q Consensus       402 ~M~~G~~~~g~~vlR~K~d~~~~n~~~~D~Vl~Ri~~~~h~~~gd~w~iyPTY~fA~~VDD~l~gITHvlRg~E~~~~~~  481 (745)
                      +|++|++.+|+++||||+|++++|++|+|+|+||+.+.||||+|++||||||||||||++||+++|||+|||.||..++.
T Consensus       377 ~Mr~Gk~~eGeAtLRmK~dl~~~~p~m~DlvayRik~~pHpRtg~kwcIYPTYDythCl~DSlEnITHSlCT~EF~~rR~  456 (764)
T KOG1148|consen  377 DMRDGKYEEGEATLRMKQDLESGNPQMWDLVAYRIKNVPHPRTGDKWCIYPTYDYTHCLVDSLENITHSLCTKEFQTRRS  456 (764)
T ss_pred             HHhcCCcCcChhheeeeeeccCCCccccccceeeeecCCCCCCCCceEEecccchhhhehhhhhhhhhHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCcEEeeecccCCCccccccccccccccCccCCCCCCCcccHHHHHHcCCCHHHHHHHHHhcCccCCC
Q 004546          482 SYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSD  561 (745)
Q Consensus       482 ~q~~L~~aLg~~~P~~~ef~rLn~~g~kLSKRk~~~lv~~g~v~gWDDPRl~TL~~lrrrG~~PeAI~~fl~~lG~s~~~  561 (745)
                      +|+|||++|++|+|.||||||||++|++|||||+.+||++|+|+||||||++||.+|||||++|+||++||+.+|+|.++
T Consensus       457 SY~WLcnaL~iY~P~qwEYgRLNv~~tv~SKRKi~~Lv~~~~V~~wDDPRLfTL~alRRRG~ppeAIn~F~~~lGvT~a~  536 (764)
T KOG1148|consen  457 SYYWLCNALEIYCPVQWEYGRLNVTYTVVSKRKILKLVTEGYVRGWDDPRLFTLTALRRRGFPPEAINNFCASLGVTTAQ  536 (764)
T ss_pred             hHHHHHhhhhcccchhhhhceeeeeeeeeehHHHHHHhhhcccccCCCccchhhhhHHhcCCCHHHHHHHHHHhCcceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCHHHHHHHHHHhhccCCCcceeeecceeeEEEcCCCCceeeeeeccCCCCCCCCCCCeeEeecccceeeeccccccc
Q 004546          562 SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMK  641 (745)
Q Consensus       562 ~~~~~~~Le~~ir~~l~~~~~R~~aV~dp~kl~i~n~~~~~~~~~~~p~~p~~~~~~~~g~~~v~~~~~vyIe~~D~~~~  641 (745)
                      .+|+...||+++|++|+.++||.|+|++|+||+|+|+++++...+++|++|+   +|.+|+|.|+|++.||||++||+++
T Consensus       537 ~~i~v~~lE~~VRd~Ln~tapR~M~VleplkVti~N~~~~~~~~i~iPd~P~---dp~~g~~~Vpft~vIYIErSDFkee  613 (764)
T KOG1148|consen  537 TTIDVARLEAAVRDYLNDTAPRLMFVLEPLKVTIENLSDDYPESIEIPDFPG---DPTSGFHKVPFTRVIYIERSDFKEE  613 (764)
T ss_pred             ceecHHHHHHHHHHHHhccCcceEEeecceEEEEecCCcchhhhccCCCCCC---CCccccccccccceEEEEccccccc
Confidence            9999999999999999999999999999999999999999999999999999   7999999999999999999999999


Q ss_pred             ccccccCcCCCCEEEEeec-eeEEEEEEeecCCCCcEEEEEEEEcC-CCCCCCCceEEeccCC
Q 004546          642 DSKDYYGLAPGKSVLLRYA-FPIKCTEVILSDDKETILHIRAEYDP-SKKTKPKVFLSFISCH  702 (745)
Q Consensus       642 ~~~~~~~l~~g~~v~l~~~-~~i~~~~~~~~~~~g~v~~l~~~~~~-~~~~k~k~~i~Wv~~~  702 (745)
                      ++|+|+||+|||+|+|++. ++|.+.+|+ +|++|.|++|+++||+ +.++|||++|||||++
T Consensus       614 ~dK~f~RLtpgQpVGLr~~~~vi~~~~vv-kD~~g~v~ei~v~yd~~s~~~KPK~fIhWVse~  675 (764)
T KOG1148|consen  614 DDKDFFRLTPGQPVGLRYAGYVIRVVKVV-KDDEGTVIEIHVEYDPASKKKKPKAFIHWVSES  675 (764)
T ss_pred             CCcchhccCCCCcceeEeecceEEEEEEe-eCCCCceEEEEEEecccccccCCceeEEeccCC
Confidence            9999999999999999888 566666666 8999999999999997 5668999999999973

>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PF03950 tRNA-synt_1c_C: tRNA synthetases class I (E and Q), anti-codon binding domain; InterPro: IPR020059 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF04557 tRNA_synt_1c_R2: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 ; InterPro: IPR007638 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG2511 GatE Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00134 gatE_arch glutamyl-tRNA(Gln) amidotransferase, subunit E Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK04028 glutamyl-tRNA(Gln) amidotransferase subunit E; Validated Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05477 gatB aspartyl/glutamyl-tRNA amidotransferase subunit B; Validated Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02751 glutamyl-tRNA(Gln) amidotransferase Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>TIGR00133 gatB glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>COG0064 GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF02637 GatB_Yqey: GatB domain; InterPro: IPR018027 The GatB domain, the function of which is uncertain, is associated with aspartyl/glutamyl amidotransferase subunit B and glutamyl amidotransferase subunit E Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>smart00845 GatB_Yqey GatB domain Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF09424 YqeY: Yqey-like protein; InterPro: IPR019004 Putative protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; YOR215C is not an essential gene Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PHA01735 hypothetical protein Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
1euq_A548 Crystal Structure Of Glutaminyl-Trna Synthetase Com 1e-109
1qrs_A553 Glutaminyl-Trna Synthetase Mutant D235n Complexed W 1e-109
1o0b_A554 Crystal Structure Of L-Glutamine And Ampcpp Bound T 1e-109
1nyl_A539 Unliganded Glutaminyl-Trna Synthetase Length = 539 1e-109
1gsg_P553 Structure Of E.Coli Glutaminyl-Trna Synthetase Comp 1e-109
1qrt_A553 Glutaminyl-Trna Synthetase Mutant D235g Complexed W 1e-109
1qru_A553 Glutaminyl-Trna Synthetase Mutant I129t Complexed W 1e-108
2rd2_A556 Glutaminyl-Trna Synthetase Mutant C229r With Bound 1e-108
2hz7_A 851 Crystal Structure Of The Glutaminyl-Trna Synthetase 3e-84
3aii_A553 Archaeal Non-Discriminating Glutamyl-Trna Synthetas 4e-38
3tl4_X187 Crystal Structure Of The Trna Binding Domain Of Glu 1e-16
2o5r_A481 Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 9e-12
2cfo_A492 Non-discriminating Glutamyl-trna Synthetase From Th 2e-11
4g6z_A490 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 1e-10
3akz_B487 Crystal Structure Of Thermotoga Maritima Nondiscrim 2e-09
3afh_A488 Crystal Structure Of Thermotoga Maritima Nondiscrim 2e-09
3al0_C592 Crystal Structure Of The Glutamine Transamidosome F 3e-09
1g59_A468 Glutamyl-Trna Synthetase Complexed With Trna(Glu). 4e-09
4gri_A512 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 1e-08
1j09_A468 Crystal Structure Of Thermus Thermophilus Glutamyl- 1e-08
3pny_A505 Structure Of Glutamyl-Trna Synthetase From Mycobact 2e-06
3pnv_A505 V369m Mutant Of Glutamyl-Trna Synthetase From Mycob 2e-06
2ja2_A498 Mycobacterium Tuberculosis Glutamyl-Trna Synthetase 2e-06
>pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthetase Complexed With A Trna- Gln Mutant And An Active-Site Inhibitor Length = 548 Back     alignment and structure 
Iteration: 1

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
           ++++D+ L  +G +  V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP
Sbjct: 13  RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
             E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+
Sbjct: 72  VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
           EYR    +   NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + 
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
           YRIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + + 
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
             P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F 
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
           + IG+++ D+ I +  LE  IRE+LN+ APR M V++P+K+VI N +  G ++ +     
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
           P+          +VPFS  ++I+ +DFR + +K Y  L  GK V LR A+ IK  E +  
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
           D +  I  I   YD    +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1O0B|A Chain A, Crystal Structure Of L-Glutamine And Ampcpp Bound To Glutamine Aminoacyl Trna Synthetase Length = 554 Back     alignment and structure
>pdb|1NYL|A Chain A, Unliganded Glutaminyl-Trna Synthetase Length = 539 Back     alignment and structure
>pdb|1GSG|P Chain P, Structure Of E.Coli Glutaminyl-Trna Synthetase Complexed With Trnagln And Atp At 2.8 Angstroms Resolution Length = 553 Back     alignment and structure
>pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|2RD2|A Chain A, Glutaminyl-Trna Synthetase Mutant C229r With Bound Analog 5'-O-[n-(L- Glutaminyl)-Sulfamoyl]adenosine Length = 556 Back     alignment and structure
>pdb|2HZ7|A Chain A, Crystal Structure Of The Glutaminyl-Trna Synthetase From Deinococcus Radiodurans Length = 851 Back     alignment and structure
>pdb|3AII|A Chain A, Archaeal Non-Discriminating Glutamyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Length = 553 Back     alignment and structure
>pdb|3TL4|X Chain X, Crystal Structure Of The Trna Binding Domain Of Glutaminyl-Trna Synthetase From Saccharomyces Cerevisiae Length = 187 Back     alignment and structure
>pdb|2O5R|A Chain A, Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 6.1.1.17) (Glutamate-Trna Ligase 1) (Glurs 1) (Tm1351) From Thermotoga Maritima At 2.5 A Resolution Length = 481 Back     alignment and structure
>pdb|2CFO|A Chain A, Non-discriminating Glutamyl-trna Synthetase From Thermosynechococcus Elongatus In Complex With Glu Length = 492 Back     alignment and structure
>pdb|4G6Z|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Burkholderia Thailandensis Bound To L-Glutamate Length = 490 Back     alignment and structure
>pdb|3AKZ|B Chain B, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With Trnagln And A Glutamyl-Amp Analog Length = 487 Back     alignment and structure
>pdb|3AFH|A Chain A, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With A Glutamyl-Amp Analog Length = 488 Back     alignment and structure
>pdb|3AL0|C Chain C, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 592 Back     alignment and structure
>pdb|1G59|A Chain A, Glutamyl-Trna Synthetase Complexed With Trna(Glu). Length = 468 Back     alignment and structure
>pdb|4GRI|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Borrelia Burgdorferi Bound To Glutamic Acid And Zinc Length = 512 Back     alignment and structure
>pdb|1J09|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna Synthetase Complexed With Atp And Glu Length = 468 Back     alignment and structure
>pdb|3PNY|A Chain A, Structure Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis In Space Group P21 Length = 505 Back     alignment and structure
>pdb|3PNV|A Chain A, V369m Mutant Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis Length = 505 Back     alignment and structure
>pdb|2JA2|A Chain A, Mycobacterium Tuberculosis Glutamyl-Trna Synthetase Length = 498 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 0.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 0.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 0.0
3tl4_X187 Glutaminyl-tRNA synthetase; glutamine, appended do 2e-64
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 4e-17
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 4e-16
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 1e-15
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 2e-14
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 2e-14
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 6e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 6e-11
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 9e-11
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Length = 553 Back     alignment and structure
 Score =  715 bits (1848), Expect = 0.0
 Identities = 208/461 (45%), Positives = 287/461 (62%), Gaps = 19/461 (4%)

Query: 261 KEVLDKHLEV-TGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
           ++++D+ L       V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP 
Sbjct: 12  RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 71

Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
            E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+E
Sbjct: 72  KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 131

Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
           YR    +   NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + Y
Sbjct: 132 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 191

Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
           RIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + +  
Sbjct: 192 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV 251

Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
            P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F +
Sbjct: 252 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCK 311

Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
            IG+++ D+ I +  LE  IRE+LN+ APR M V++P+K+VI N + G    +     P 
Sbjct: 312 RIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQ-GEGEMVTMPNHP- 369

Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
                     +VPFS  ++I+ +DFR + +K Y  L  GK V LR A+ IK   V   D 
Sbjct: 370 --NKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVE-KDA 426

Query: 674 KETILHIRAEYDPSKKT-------KPKVFLSFISCHAGICC 707
           +  I  I   YD    +       K K  + ++S    +  
Sbjct: 427 EGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPV 467
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Length = 851 Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 553 Back     alignment and structure
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae} Length = 187 Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Length = 490 Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Length = 298 Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Length = 492 Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Length = 481 Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Length = 468 Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Length = 498 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Length = 592 Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Length = 488 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 745
d1gtra2331 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (Gln 3e-80
d1j09a2305 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS 2e-56
d1nzja_286 c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB 4e-45
d1gtra1209 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), 8e-18
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 2e-06
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 0.002
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutaminyl-tRNA synthetase (GlnRS)
species: Escherichia coli [TaxId: 562]

 Score =  257 bits (658), Expect = 3e-80
 Identities = 168/326 (51%), Positives = 226/326 (69%), Gaps = 7/326 (2%)

Query: 261 KEVLDKHLEV-TGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
           ++++D+ L       V TRFPPEPNGYLHIGHAK++ ++FG+A++  G C LR+DDTNP 
Sbjct: 5   RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 64

Query: 320 AEKKEYIDHIEEIVQWMGW-EPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
            E  EY++ I+  V+W+G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+E
Sbjct: 65  KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 124

Query: 379 YRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
           YR        NSP+RDR + E+L LFE MR G  EEGKA LR K DM +    M D + Y
Sbjct: 125 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 184

Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
           RIKF  H   G+KWCIYP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + +  
Sbjct: 185 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV 244

Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
            P  +E+SRLN+  TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F +
Sbjct: 245 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCK 304

Query: 554 GIGISRSDSLIRLDRLEYHIREELNK 579
            IG+++ D+ I +  LE  IRE+LN+
Sbjct: 305 RIGVTKQDNTIEMASLESCIREDLNE 330
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Length = 305 Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Length = 286 Back     information, alignment and structure
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query745
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 100.0
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 100.0
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 100.0
d1gtra1209 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon 99.94
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.63
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.62
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.56
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.46
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.37
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.31
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.29
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.18
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.93
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.89
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 98.13
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 97.1
d1i6la_326 Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus ste 95.28
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 94.37
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 93.65
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 84.07
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutaminyl-tRNA synthetase (GlnRS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=0  Score=628.43  Aligned_cols=319  Identities=52%  Similarity=0.925  Sum_probs=301.8

Q ss_pred             HHHHHHHHHHC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             89999854202-99179983899998484468999999799998719879999534882104189999999999984999
Q 004546          261 KEVLDKHLEVT-GGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWE  339 (745)
Q Consensus       261 ~~~~~~~~~~~-~g~V~tRFaPsPtG~LHIGhaRaal~n~~~Ar~~~G~~iLRidDTDp~re~~~~~~~I~edL~wLGi~  339 (745)
                      .++|+++|... +++|||||||||||+|||||||||++||++||++||+|+|||||||++|+.++|+++|+++|+|||+.
T Consensus         5 ~~~~~~~l~~~~~~~v~tRFAPSPTG~LHiG~~rtal~n~l~Ak~~~G~fiLRIEDtD~~R~~~~~~~~I~~dL~WLGl~   84 (331)
T d1gtra2           5 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFH   84 (331)
T ss_dssp             HHHHHHHHHHTSCSSCEEEECCCSSSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGGGCCHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             99999898539988079985979898643899999999999999849979997676898765555799999999997503


Q ss_pred             CC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             99-7577741199999999999981885568999999999630----468998999997776688998744754589708
Q 004546          340 PF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEEGKAT  414 (745)
Q Consensus       340 pd-~~~~qSd~~~~~ye~a~~LI~~G~AY~c~cs~eei~~~R~----~~~~~~~R~~s~ee~l~~f~~M~~G~~~~g~~~  414 (745)
                      || .++|||+|++.|++++.+|+++|+||+|+||++|+++.|.    .+.+++||.+...+++..|+.|..+....+.++
T Consensus        85 wD~~~~~QS~r~~~Y~~~~~~L~~~G~aY~C~cs~eel~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (331)
T d1gtra2          85 WSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKAC  164 (331)
T ss_dssp             CSSSCEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHTCCSSSCCCCCTTTTCCHHHHHHHHHHHHHTCSCTTSCE
T ss_pred             CCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
T ss_conf             46664005629999999998653368864464519999997755411699988887321235777667764345678627


Q ss_pred             EEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHCCCC
Q ss_conf             99972478999787760799982289998899421023222111101135872201068400025147999999819999
Q 004546          415 LRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQ  494 (745)
Q Consensus       415 lR~K~d~~~~n~~~~D~V~~Ri~~~~h~~~Gd~~~iyPTY~fa~~VDD~l~gITHvlRg~E~~~~t~~~~~L~~aLg~~~  494 (745)
                      +|++++..+++..++|++.+++....|...+.+++|+||||||+||||++||||||+||+||+.+|+.|.||+++||+..
T Consensus       165 ~r~~~~~~~~~~~~~d~~~~~~~~~~~d~v~~r~dg~ptY~lA~vVDD~~~gIThViRG~D~l~~T~~q~~l~~~Lg~~~  244 (331)
T d1gtra2         165 LRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPV  244 (331)
T ss_dssp             EEECSCTTCSSGGGSSCEEEEECCCCBTTTBTSCSEEECHHHHHHHHHHHHTCSEEEEEGGGTTTHHHHHHHHHHSCCSC
T ss_pred             EEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             88740467896057766212210578754143433331776667876666146410023303355489999998546887


Q ss_pred             CCEEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             83785-00136898100124322111257657888887300999998699989999999861956889644787799999
Q 004546          495 PYVWE-YSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHI  573 (745)
Q Consensus       495 P~~~e-f~rLn~~g~kLSKRk~~~lv~~~~v~gWdDPrl~TL~~lrrrG~~PeAI~~fl~~lG~s~~~~~~~~~~Le~~~  573 (745)
                      |.+++ +.+++.+|.+||||++..+++++.+.||||||++||.+||++||+|+||+||++.||||..++.+++..|++++
T Consensus       245 p~~~h~~~~l~~~g~~lskr~l~~~~~~~~~~~~dd~~~~sl~~lr~~G~~peai~nyla~LGws~~d~~~e~~sLe~~~  324 (331)
T d1gtra2         245 HPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCI  324 (331)
T ss_dssp             CCEEEEECCCCBTTSCCCHHHHHHHHHTTSSSSTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHHHHHH
T ss_pred             CCCEEECCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             86325313323456501103433010367654556878646999998799899999999995899999846287499999


Q ss_pred             HHHHCC
Q ss_conf             985315
Q 004546          574 REELNK  579 (745)
Q Consensus       574 r~~l~~  579 (745)
                      |+.+|+
T Consensus       325 r~~ln~  330 (331)
T d1gtra2         325 REDLNE  330 (331)
T ss_dssp             HHHHHH
T ss_pred             HHHCCC
T ss_conf             876369
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure