Citrus Sinensis ID: 004796

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730
Protein Sequence
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccEEccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHcHcHHHHHHHHHcccccccHHccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEcHEEEHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MALYATVQTVGPAilslkligparftSTTTALAVALAAYVValpegthmKAKRIALGQIVITYVIGFvngerteavmhplhvAASTAVGVFACVLAlslpyprlaccqvkknckllseNSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESmkwerlplKFLRsyymnpgeklqdleiplkGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKqaqscdsltvpesnAEDIMKFLQTLqniptttqELSSYFFLFCMKLlqwksspnqstnclkddtvkeyegssngfsFKEVWSNWSmkvkskrlvpafkCSLSLGLAVLFGLlyskpngiwsglPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFlferflpirflsliPWFIFTAFLRRSRMYGQAGGISAVIGAVLILgrknfgppsEFAIARIVETFIGLSCSIMIDLLfqptrastLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGeaevepnfwffpFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVgssikcfedvTTIKSLATIEKELEKNnisydlelgksknpngisdldEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQwenpssnvnLLEISCKINALYN
Flexible Loop (DISEMBL)
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTikqaqscdsltVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVgssikcfedvttIKSLATIEKELEKNnisydlelgksknpNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELvqwenpssnvnlleisckinalyn
Low Complexity Region (SEG)
MALYATVQTVGPAILSLKLIGPARFTStttalavalaayvvalPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCslslglavlfgllYSKPNGIWSGLPVAISFAAAREATFKVANIKAQgtvlgtvygvlgCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHeldsdlellkekVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN
Disordered region (IsUnstruct)
**LYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCA***************LTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWK*****************Y***SNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSL****ASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDL*************LDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINAL**
Disordered Region (DISOPRED)
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHIS***************************************SSYFFLFCMKLLQWKSSP************************KEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSM*****************MQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQ******TSWKNEVHELDSDLELLKEKVGSS****************************LELGKSKNPNGISDLDEAAMGKLICSYLQHAK****************SQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALY*
Disordered Region (DISEMBL)
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN
Disordered Region (DISPRO)
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSS*************************KEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIxxxxxxxxxxxxxxxxxxxxxVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	730
255581111	805	conserved hypothetical protein [Ricinus	0.982	0.890	0.686	0.0
224104475	807	predicted protein [Populus trichocarpa]	0.989	0.894	0.670	0.0
225435010	817	PREDICTED: uncharacterized protein LOC10	0.993	0.887	0.601	0.0
147843231	801	hypothetical protein VITISV_019389 [Viti	0.993	0.905	0.601	0.0
224054805	649	predicted protein [Populus trichocarpa]	0.869	0.978	0.658	0.0
297746109	783	unnamed protein product [Vitis vinifera]	0.975	0.909	0.596	0.0
357454145	794	p-hydroxybenzoic acid efflux pump subuni	0.969	0.891	0.551	0.0
356547238	784	PREDICTED: uncharacterized protein LOC10	0.969	0.903	0.552	0.0
30684006	796	uncharacterized protein [Arabidopsis tha	0.976	0.895	0.535	0.0
3927826	794	hypothetical protein [Arabidopsis thalia	0.976	0.897	0.535	0.0

>gi|255581111|ref|XP_002531370.1| conserved hypothetical protein [Ricinus communis] gi|223529030|gb|EEF31018.1| conserved hypothetical protein [Ricinus communis]

 Score = 1029 bits (2661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/743 (68%), Positives = 613/743 (82%), Gaps = 26/743 (3%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIV 60
           +ALYAT Q++GPA+LSL LIGPARFTS T +LAVAL A+VVALPEGTH+ AKRIALGQIV
Sbjct: 76  LALYATFQSLGPAMLSLWLIGPARFTSGTISLAVALGAFVVALPEGTHLIAKRIALGQIV 135

Query: 61  ITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENS 120
           I YVI F+NG  T+ +MHPLHVAASTAVGV AC+LAL LPYPRLAC +VK+NCKLL+EN+
Sbjct: 136 IVYVIAFINGVHTQPIMHPLHVAASTAVGVLACMLALLLPYPRLACWEVKENCKLLAENA 195

Query: 121 SERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSY 180
           S+RLKLYVKAF AED   AL+SISQAKLL   GTK +QNIKRYQ SMKWERLP KFLR Y
Sbjct: 196 SKRLKLYVKAFAAEDGALALSSISQAKLLASAGTKLLQNIKRYQGSMKWERLPFKFLRHY 255

Query: 181 YMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQS--- 237
           YMNPGEKLQ+LEIPLKGM+MA+T ++SFPV++ +GE KE + +L+EH+SLT+KQ ++   
Sbjct: 256 YMNPGEKLQELEIPLKGMEMALTGISSFPVKMAEGETKESL-QLEEHVSLTLKQIKNCLP 314

Query: 238 CDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDT 297
           CDSLTVPES AE I++ LQTLQ IP  TQ+LSS FFLFCMKLL  K  P Q++      +
Sbjct: 315 CDSLTVPESKAETIIESLQTLQIIPKATQDLSSLFFLFCMKLLHCKPLPKQTS------S 368

Query: 298 VKEYEGSS-----NGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGI 352
            +E EGS+     N F    +W+NW+M V+SKRL+PAFKCSLSLGLA+LFGLLYSK NG 
Sbjct: 369 KQESEGSTTSSKKNSF-LDSIWTNWAMNVRSKRLMPAFKCSLSLGLAILFGLLYSKENGF 427

Query: 353 WSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFT 412
           WSGLPVAIS AA+REATFKVAN+KAQGTVLGTVYGVLGCF+FERF+PIRFLSL+PWFI T
Sbjct: 428 WSGLPVAISLAASREATFKVANVKAQGTVLGTVYGVLGCFVFERFMPIRFLSLLPWFILT 487

Query: 413 AFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQP 472
           +FLRRSRMYGQAGGISA IGAVLILGRK FGPPSEFAIARI ETFIGLSCSIM++L+ QP
Sbjct: 488 SFLRRSRMYGQAGGISAAIGAVLILGRKGFGPPSEFAIARITETFIGLSCSIMVELILQP 547

Query: 473 TRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPN 532
           TRA++LAKVQL+KSL +L  CIGS+SL+++    +ENQ+RLK++V+EL KFIGEAEVEPN
Sbjct: 548 TRAASLAKVQLTKSLGSLSACIGSISLEANLL--VENQRRLKLEVSELKKFIGEAEVEPN 605

Query: 533 FWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELL 592
           FWF PFH ACY KL G+L+KMVDLLLF+AH+VGFL+Q+SQ+   SWK  V++LD DLEL 
Sbjct: 606 FWFLPFHSACYGKLFGSLSKMVDLLLFSAHAVGFLQQESQKYGASWKEFVNKLDGDLELF 665

Query: 593 KEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN-----GISDLDEAAM 647
           KE VGS IKC EDVT +KSL  ++KELE   +SYD ELG   N N     G ++ DE  +
Sbjct: 666 KEMVGSLIKCLEDVTLLKSLTFLDKELENRKLSYDPELGNKPNSNIFRISGPNEEDE--I 723

Query: 648 GKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELV 707
           G ++ SYLQH+KE+VDK+ A E +KE +SQ+VL+L ALG+CM   I+E + +++GI+ELV
Sbjct: 724 GSIMHSYLQHSKEVVDKLHAVE-DKEQKSQMVLNLGALGFCMNNFIKEARELQKGIQELV 782

Query: 708 QWENPSSNVNLLEISCKINALYN 730
           QWENP  +VNLLEISCKI ALY+
Sbjct: 783 QWENPGKDVNLLEISCKIAALYS 805

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104475|ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|222849856|gb|EEE87403.1| predicted protein [Populus trichocarpa]

 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/744 (67%), Positives = 591/744 (79%), Gaps = 22/744 (2%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIV 60
           +ALYATVQ+VGPA+LSL LIGPA  TS T +LAVAL A+VV  PEGTH+ AKRIALGQIV
Sbjct: 72  LALYATVQSVGPALLSLWLIGPAMLTSGTISLAVALGAFVVVFPEGTHLVAKRIALGQIV 131

Query: 61  ITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENS 120
           I YVI F+NG  TEA+MH LHVAASTA+GV ACVLAL LPYPRLAC ++K NC+ L+EN 
Sbjct: 132 IVYVIAFINGVHTEAIMHTLHVAASTAIGVLACVLALLLPYPRLACWELKLNCERLAENV 191

Query: 121 SERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSY 180
           S RL LYVKAFCAED+  AL SISQAK L + G K +Q+IKRYQES+KWERLPL+FLR+ 
Sbjct: 192 SARLNLYVKAFCAEDSALALTSISQAKPLAVAGAKLLQSIKRYQESVKWERLPLRFLRNL 251

Query: 181 YMNPGEKLQDLEIPLKGMQMAVTS-VTSFPVQILDGELKECVKKLDEHISLTIKQAQSC- 238
           Y+NPGE+LQ+LEIPL+GM+MA+TS  TS PV+ILDGE K  + +L E++SL  KQ ++C 
Sbjct: 252 YLNPGERLQELEIPLRGMEMALTSCTTSLPVRILDGETKHGLVQLVENVSLIQKQIKNCL 311

Query: 239 --DSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
             DSLTVPESNA++I++  QT Q I T  Q+L S+FFLFCMKLL  KS         K  
Sbjct: 312 PRDSLTVPESNADNIVESHQTPQTISTRHQDLPSFFFLFCMKLLHCKSLG-------KPI 364

Query: 297 TVKEYEGSSN-----GFSFKEVW-SNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPN 350
           T  + +GSS      GF FK  W SNWS  V SKRL+PAFKCSLSLGLAVLFGL+YSK +
Sbjct: 365 TPTQQKGSSTPSKQTGF-FKSTWMSNWSTSVSSKRLMPAFKCSLSLGLAVLFGLIYSKKD 423

Query: 351 GIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFI 410
           G WSGLPVAIS AAAREATFKVAN+KAQGTVLGTVYGV GCF+FER+L IRF+SL+PWF+
Sbjct: 424 GYWSGLPVAISLAAAREATFKVANVKAQGTVLGTVYGVFGCFVFERYLSIRFISLLPWFV 483

Query: 411 FTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLF 470
            T+FLR S+ YGQAGGISAVIGAVL+LGRKNFGPPSEFAIARIVETFIGLSCSIM+DLL 
Sbjct: 484 ITSFLRHSKTYGQAGGISAVIGAVLVLGRKNFGPPSEFAIARIVETFIGLSCSIMVDLLL 543

Query: 471 QPTRASTLAKVQLSKSLATLHDCIGSMSLQS-SQASWLENQKRLKMQVTELAKFIGEAEV 529
           QPTRAS+LAK QLSK   TL  CIGS+SL + ++ S LENQ+RLK+ V+EL KFIGEAEV
Sbjct: 544 QPTRASSLAKAQLSKCFETLSACIGSISLAANNKTSLLENQRRLKLDVSELGKFIGEAEV 603

Query: 530 EPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDL 589
           EPNFWF PF   CY KLLG+L+++VDLLLF+A +VG LE +SQ+   SWK  V +LD DL
Sbjct: 604 EPNFWFLPFPSPCYFKLLGSLSRLVDLLLFSADAVGLLEHESQKFGASWKEYVTKLDGDL 663

Query: 590 ELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN--GISDLDEAAM 647
           E+ KE  GS +KCFEDVT + SL  +EKELE  NIS+DLE+GKS N N   +S  +E  +
Sbjct: 664 EIFKEMSGSLVKCFEDVTMLLSLEFLEKELENKNISHDLEMGKSSNRNIFKVSGSNEDKI 723

Query: 648 GKLICSYLQHAKELVDKIKAT-EGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKEL 706
             +  SYLQH+KE+VDK  A  EGE+EL+SQVVL LSALG+CM  LI+ETK IE+GI E+
Sbjct: 724 DSVTSSYLQHSKEMVDKFHAADEGERELKSQVVLCLSALGFCMSNLIKETKEIEKGIIEI 783

Query: 707 VQWENPSSNVNLLEISCKINALYN 730
           +QWENPS ++NL EISCKI ALYN
Sbjct: 784 LQWENPSKHINLYEISCKIRALYN 807

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435010|ref|XP_002281216.1| PREDICTED: uncharacterized protein LOC100243247 [Vitis vinifera]

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/743 (60%), Positives = 566/743 (76%), Gaps = 18/743 (2%)

Query: 2   ALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVI 61
           A YATV  V PAILSL +IGP R +    A AVAL+A+VV LPE + +  +RIALGQIVI
Sbjct: 79  AAYATVLGVCPAILSLWVIGPTRLSIGNMAAAVALSAFVVGLPEWSGLVVERIALGQIVI 138

Query: 62  TYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSS 121
            Y++  + G  T+AVMHP+HVAASTAVGV ACVLAL  PYPRLA  +VK+ CKL +EN+S
Sbjct: 139 VYLLALLKGGETDAVMHPVHVAASTAVGVLACVLALLFPYPRLASYEVKQKCKLFAENAS 198

Query: 122 ERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYY 181
           ERLKL+VKAFCAED+ SAL+SI+QAK   + G K   ++KR Q SM+WERLPLK  +  Y
Sbjct: 199 ERLKLFVKAFCAEDHASALSSIAQAKRFAVAGAKLHHSVKRRQGSMQWERLPLKMFKPCY 258

Query: 182 MNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQ-----AQ 236
            NPGE+LQ +++PL+GM++A+TS  SFPV+I+DGELK+ + +L+EH+SLT+KQ     + 
Sbjct: 259 KNPGERLQCIQMPLRGMEIALTSSPSFPVRIMDGELKQGLVQLEEHLSLTLKQLELKCSS 318

Query: 237 SCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
             DS TVPES AE+++K LQ  Q IP T +EL  +FFLFCMKLL  +S      +CL+ +
Sbjct: 319 PSDSSTVPESTAENVVKSLQNFQTIPPTHKELPYFFFLFCMKLLHSESMAKPFNSCLQPN 378

Query: 297 TVKEYEGSSN-----GFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNG 351
           +V + EG  +     G   + V S+WSMKV   RL+PA KCSLSLGLAVLFG++YSK NG
Sbjct: 379 SVGKNEGVDDSGKQKGSFLEGVSSSWSMKVDRSRLMPALKCSLSLGLAVLFGMIYSKENG 438

Query: 352 IWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIF 411
            W+GLPVAI+F++AREATFKVAN+K QGTVLGTVYGVLGCF+FERF+ + F+SL PWFIF
Sbjct: 439 FWAGLPVAITFSSAREATFKVANLKVQGTVLGTVYGVLGCFVFERFVKLWFISLFPWFIF 498

Query: 412 TAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQ 471
           T+FL+RS++YGQAGG+SAVI AVLILGRKNFG PSEFAIARIVETFIGLSCS+++D+  Q
Sbjct: 499 TSFLQRSQIYGQAGGLSAVISAVLILGRKNFGSPSEFAIARIVETFIGLSCSVLVDIALQ 558

Query: 472 PTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEP 531
           PTRASTLAKVQLSK L  LHDCI S+SL +S+++  EN K LK  + EL KFIGEAEVEP
Sbjct: 559 PTRASTLAKVQLSKCLEALHDCICSISLCASKSNLEENHKVLKSHLNELGKFIGEAEVEP 618

Query: 532 NFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLEL 591
           NF F P H A YS+LL +L+KM DLL+  AH++ FLEQ++ +   SWK+ V ++D DL+ 
Sbjct: 619 NFLFLPLHSAAYSRLLVSLSKMADLLVHVAHALRFLEQETSKPEASWKDAVDKVDGDLKP 678

Query: 592 LKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN----GISDLDEAAM 647
            KE + S IK FE+V +IKSL  +EKELE+ NISYDLE+GKS   N      S   E  M
Sbjct: 679 FKEMLASLIKSFEEVASIKSLPALEKELEEKNISYDLEMGKSPTTNLSRLAGSGNREDEM 738

Query: 648 GKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELV 707
            K+I  YLQ++KE+V+ ++      E+RS +VLSLS LG+CM GL+RET+ IE+GIK++V
Sbjct: 739 EKMISCYLQNSKEIVEGVEGE----EVRSLMVLSLSGLGFCMSGLMRETREIEQGIKDIV 794

Query: 708 QWENPSSNVNLLEISCKINALYN 730
           QWEN SS+VNL EISCK +ALYN
Sbjct: 795 QWENHSSHVNLYEISCKAHALYN 817

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843231|emb|CAN80549.1| hypothetical protein VITISV_019389 [Vitis vinifera]

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/743 (60%), Positives = 565/743 (76%), Gaps = 18/743 (2%)

Query: 2   ALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVI 61
           A YATV  V PAILSL +IGP R +    A AVAL+A+VV LPE + +  +RIALGQIVI
Sbjct: 63  AAYATVLGVCPAILSLWVIGPTRLSIGNMAAAVALSAFVVGLPEWSGLVVERIALGQIVI 122

Query: 62  TYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSS 121
            Y++  + G  T+AVMHP+HVAASTAVGV ACVLAL  PYPRLA  +VK+ CKL +EN+S
Sbjct: 123 VYLLALLKGGETDAVMHPVHVAASTAVGVLACVLALLFPYPRLASYEVKQKCKLFAENAS 182

Query: 122 ERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYY 181
           ERLKL+VKAFCAED+ SAL+SI+QAK   + G K   ++KR Q SM+WERLPLK  +  Y
Sbjct: 183 ERLKLFVKAFCAEDHASALSSIAQAKRFAVAGAKLHHSVKRRQGSMQWERLPLKMFKPCY 242

Query: 182 MNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQ-----AQ 236
            NPGE+LQ +++PL+GM++A+TS  SFPV+I+DGELK+ + +L+EH+SLT+KQ     + 
Sbjct: 243 KNPGERLQCIQMPLRGMEIALTSSPSFPVRIMDGELKQGLVQLEEHLSLTLKQLELKCSS 302

Query: 237 SCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
             DS TVPES AE+++K LQ  Q IP T +EL  +FFLFCMKLL  +S      +CL+ +
Sbjct: 303 PSDSSTVPESTAENVVKSLQNFQTIPPTHKELPYFFFLFCMKLLHSESMAKPFNSCLQPN 362

Query: 297 TVKEYEGSSN-----GFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNG 351
           +V + EG  +     G   + V S WSMKV   RL+PA KCSLSLGLAVLFG++YSK NG
Sbjct: 363 SVGKNEGVDDSGKQKGSFLEGVSSXWSMKVDRSRLMPALKCSLSLGLAVLFGMIYSKENG 422

Query: 352 IWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIF 411
            W+GLPVAI+F++AREATFKVAN+K QGTVLGTVYGVLGCF+FERF+ + F+SL PWFIF
Sbjct: 423 FWAGLPVAITFSSAREATFKVANLKVQGTVLGTVYGVLGCFVFERFVKLWFISLFPWFIF 482

Query: 412 TAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQ 471
           T+FL+RS++YGQAGG+SAVI AVLILGRKNFG PSEFAIARIVETFIGLSCS+++D+  Q
Sbjct: 483 TSFLQRSQIYGQAGGLSAVISAVLILGRKNFGSPSEFAIARIVETFIGLSCSVLVDIALQ 542

Query: 472 PTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEP 531
           PTRASTLAKVQLSK L  LHDCI S+SL +S+++  EN K LK  + EL KFIGEAEVEP
Sbjct: 543 PTRASTLAKVQLSKCLEALHDCICSISLCASKSNLEENHKVLKSHLNELGKFIGEAEVEP 602

Query: 532 NFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLEL 591
           NF F P H A YS+LL +L+KM DLL+  AH++ FLEQ++ +   SWK+ V ++D DL+ 
Sbjct: 603 NFLFLPLHSAAYSRLLVSLSKMADLLVHVAHALRFLEQETSKPEASWKDAVDKVDGDLKP 662

Query: 592 LKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN----GISDLDEAAM 647
            KE + S IK FE+V +IKSL  +EKELE+ NISYDLE+GKS   N      S   E  M
Sbjct: 663 FKEMLASLIKSFEEVASIKSLPALEKELEEKNISYDLEMGKSPTTNLSRLAGSGNREDEM 722

Query: 648 GKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELV 707
            K+I  YLQ++KE+V+ ++      E+RS +VLSLS LG+CM GL+RET+ IE+GIK++V
Sbjct: 723 EKMISCYLQNSKEIVEGVEGE----EVRSLMVLSLSGLGFCMSGLMRETREIEQGIKDIV 778

Query: 708 QWENPSSNVNLLEISCKINALYN 730
           QWEN SS+VNL EISCK +ALYN
Sbjct: 779 QWENHSSHVNLYEISCKAHALYN 801

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054805|ref|XP_002298367.1| predicted protein [Populus trichocarpa] gi|222845625|gb|EEE83172.1| predicted protein [Populus trichocarpa]

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/656 (65%), Positives = 529/656 (80%), Gaps = 21/656 (3%)

Query: 89  GVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKL 148
           GV ACV+AL LPYPRLAC ++K++C  L+EN SERL LYVKAFCAEDN  AL SISQAK 
Sbjct: 1   GVLACVIALLLPYPRLACWELKQDCGKLAENVSERLNLYVKAFCAEDNALALTSISQAKP 60

Query: 149 LTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSF 208
           LTI G K +Q+IKRYQES+KWERLPLKFLR++Y+NPGE+LQ+LEIPL+GM++A+TS +SF
Sbjct: 61  LTIAGAKLLQSIKRYQESVKWERLPLKFLRNFYLNPGERLQELEIPLRGMEIALTSTSSF 120

Query: 209 PVQILDGELKECVKKLDEHISLTIKQAQSC---DSLTVPESNAEDIMKFLQTLQ-NIPTT 264
           P+++L+ E K+ + +L+EH+SLT+KQ ++C   DS TVPESNA+ I++FLQTLQ  IPT 
Sbjct: 121 PIRMLEAETKQGLVQLEEHVSLTLKQIKNCFPRDSFTVPESNADKIIEFLQTLQATIPTN 180

Query: 265 TQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSS----NGFSFKEVW-SNWSM 319
            ++L S+FFLFCMKLLQ KS     T      ++++ E S+    NGF FK +W SNWS 
Sbjct: 181 HEDLPSFFFLFCMKLLQRKSLAKPIT------SIQQKESSTPCQKNGF-FKSMWMSNWST 233

Query: 320 KVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQG 379
            V  KRL+PAFKCSLSLGLAVLFGL+YSK    WSGLPVAIS AAAREATFKVAN+KAQG
Sbjct: 234 SVNCKRLMPAFKCSLSLGLAVLFGLIYSKKYSYWSGLPVAISMAAAREATFKVANVKAQG 293

Query: 380 TVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGR 439
           TVLGTVYGV GCF+FER+ PIRF+SL+PWF+  +FLR S+MYGQAGGISAVIGAV+ILGR
Sbjct: 294 TVLGTVYGVFGCFVFERYFPIRFISLLPWFVVISFLRHSQMYGQAGGISAVIGAVIILGR 353

Query: 440 KNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSL 499
           K+FGPPSEFAIARIVETFIGLSCSIM+DLL QPTR+ +LAKVQLSK   TL  C+GSMSL
Sbjct: 354 KDFGPPSEFAIARIVETFIGLSCSIMVDLLLQPTRSCSLAKVQLSKCFGTLSACVGSMSL 413

Query: 500 QSSQ-ASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLL 558
            +++  + LE Q+RLK+ V+EL KFIGEAEVEPNFWF PFH ACY KLL +L+K+VDL L
Sbjct: 414 AANRKTNLLEKQRRLKLDVSELGKFIGEAEVEPNFWFLPFHSACYCKLLASLSKLVDLFL 473

Query: 559 FAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFEDVTTIKSLATIEKE 618
           F+A +VG LEQ+SQ++  SWK  V++L  D+E+ KE  GS +KCFEDVT +KSL  +EK+
Sbjct: 474 FSADAVGLLEQESQKLGASWKESVNKLHGDVEIFKEMAGSLVKCFEDVTLLKSLTFLEKK 533

Query: 619 LEKNNISYDLELGKSKNPN--GISDLDEAAMGKLICSYLQHAKELVDKIKAT--EGEKEL 674
           LE  NISYDLELGKS N N    S L +  +  +I SYLQH+KE+VDK  A   EGE+EL
Sbjct: 534 LENKNISYDLELGKSSNWNIFKASSLKDDKIDSIISSYLQHSKEIVDKFHAADHEGEREL 593

Query: 675 RSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLEISCKINALYN 730
           +SQVVL LSALG+CM  LI+ET+ IE+GI EL+QWENPS ++NL EISCKI+AL N
Sbjct: 594 KSQVVLCLSALGFCMSNLIKETREIEKGIIELLQWENPSKHINLYEISCKIHALNN 649

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746109|emb|CBI16165.3| unnamed protein product [Vitis vinifera]

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/738 (59%), Positives = 557/738 (75%), Gaps = 26/738 (3%)

Query: 2   ALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVI 61
           A YATV  V PAILSL +IGP R +    A AVAL+A+VV LPE + +  +RIALGQIVI
Sbjct: 63  AAYATVLGVCPAILSLWVIGPTRLSIGNMAAAVALSAFVVGLPEWSGLVVERIALGQIVI 122

Query: 62  TYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSS 121
            Y++  + G  T+AVMHP+HVAASTAVGV ACVLAL  PYPRLA  +VK+ CKL +EN+S
Sbjct: 123 VYLLALLKGGETDAVMHPVHVAASTAVGVLACVLALLFPYPRLASYEVKQKCKLFAENAS 182

Query: 122 ERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYY 181
           ERLKL+VKAFCAED+ SAL+SI+QAK   + G K   ++KR Q SM+WERLPLK  +  Y
Sbjct: 183 ERLKLFVKAFCAEDHASALSSIAQAKRFAVAGAKLHHSVKRRQGSMQWERLPLKMFKPCY 242

Query: 182 MNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQ-----AQ 236
            NPGE+LQ +++PL+GM++A+TS  SFPV+I+DGELK+ + +L+EH+SLT+KQ     + 
Sbjct: 243 KNPGERLQCIQMPLRGMEIALTSSPSFPVRIMDGELKQGLVQLEEHLSLTLKQLELKCSS 302

Query: 237 SCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
             DS TVPES AE+++K LQ  Q IP T +EL  +FFLFCMKLL  +S      +CL+ +
Sbjct: 303 PSDSSTVPESTAENVVKSLQNFQTIPPTHKELPYFFFLFCMKLLHSESMAKPFNSCLQPN 362

Query: 297 TVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGL 356
           +V + EG  +              V   RL+PA KCSLSLGLAVLFG++YSK NG W+GL
Sbjct: 363 SVGKNEGVDDS-------------VDRSRLMPALKCSLSLGLAVLFGMIYSKENGFWAGL 409

Query: 357 PVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLR 416
           PVAI+F++AREATFKVAN+K QGTVLGTVYGVLGCF+FERF+ + F+SL PWFIFT+FL+
Sbjct: 410 PVAITFSSAREATFKVANLKVQGTVLGTVYGVLGCFVFERFVKLWFISLFPWFIFTSFLQ 469

Query: 417 RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS 476
           RS++YGQAGG+SAVI AVLILGRKNFG PSEFAIARIVETFIGLSCS+++D+  QPTRAS
Sbjct: 470 RSQIYGQAGGLSAVISAVLILGRKNFGSPSEFAIARIVETFIGLSCSVLVDIALQPTRAS 529

Query: 477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFF 536
           TLAKVQLSK L  LHDCI S+SL +S+++  EN K LK  + EL KFIGEAEVEPNF F 
Sbjct: 530 TLAKVQLSKCLEALHDCICSISLCASKSNLEENHKVLKSHLNELGKFIGEAEVEPNFLFL 589

Query: 537 PFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKV 596
           P H A YS+LL +L+KM DLL+  AH++ FLEQ++ +   SWK+ V ++D DL+  KE +
Sbjct: 590 PLHSAAYSRLLVSLSKMADLLVHVAHALRFLEQETSKPEASWKDAVDKVDGDLKPFKEML 649

Query: 597 GSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN----GISDLDEAAMGKLIC 652
            S IK FE+V +IKSL  +EKELE+ NISYDLE+GKS   N      S   E  M K+I 
Sbjct: 650 ASLIKSFEEVASIKSLPALEKELEEKNISYDLEMGKSPTTNLSRLAGSGNREDEMEKMIS 709

Query: 653 SYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENP 712
            YLQ++KE+V+ ++      E+RS +VLSLS LG+CM GL+RET+ IE+GIK++VQWEN 
Sbjct: 710 CYLQNSKEIVEGVEGE----EVRSLMVLSLSGLGFCMSGLMRETREIEQGIKDIVQWENH 765

Query: 713 SSNVNLLEISCKINALYN 730
           SS+VNL EISCK +ALYN
Sbjct: 766 SSHVNLYEISCKAHALYN 783

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454145|ref|XP_003597353.1| p-hydroxybenzoic acid efflux pump subunit aaeB [Medicago truncatula] gi|355486401|gb|AES67604.1| p-hydroxybenzoic acid efflux pump subunit aaeB [Medicago truncatula]

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/723 (55%), Positives = 527/723 (72%), Gaps = 15/723 (2%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALP-EGTHMKAKRIALGQI 59
           + LYAT+Q++GPA+LSL  IGP  F+  T ++AVALAA+VV LP + TH+ AKRI+LGQI
Sbjct: 80  LGLYATIQSLGPAMLSLWAIGPNHFSKGTASIAVALAAFVVVLPSQSTHLIAKRISLGQI 139

Query: 60  VITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSEN 119
           V+ YV+ + NG   + +MHP+H+AASTA+GV ACVLAL LPYPR AC QV KN KLL+ N
Sbjct: 140 VLVYVLAYSNGAHIDPIMHPIHLAASTALGVIACVLALLLPYPRFACYQVNKNYKLLTNN 199

Query: 120 SSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRS 179
             +RLKL VK    E+NTSA   IS+AK L    TK +  I RY + MKWERLP+ F + 
Sbjct: 200 VLKRLKLLVKVISEEENTSAFGLISRAKSLATKRTKLLFTIMRYLDGMKWERLPINFFKP 259

Query: 180 YYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQ--- 236
           +Y   GEKLQ+++  L GM++A++   SFP+ ILD +LK  +  L+EH+SLTIK A+   
Sbjct: 260 HYNKLGEKLQEVDTNLIGMELALSCYKSFPINILDQDLKHGLNTLEEHVSLTIKNAKHTF 319

Query: 237 -SCDSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKD 295
               SLTVPESNA++I  FLQ+L  IPTT QEL  +FFLFC KLL  K S    TN ++ 
Sbjct: 320 LGSGSLTVPESNAKNITHFLQSLHTIPTTHQELPIFFFLFCAKLLHMKPSTEGPTN-VQA 378

Query: 296 DTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSG 355
             + + E S      K+ W+NW+ K+KS  L+PA K S +LGL+V  GLLYSK +G WSG
Sbjct: 379 QPIHKKEISHED---KDKWANWATKLKSSNLLPAIKYSFALGLSVFMGLLYSKESGFWSG 435

Query: 356 LPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFL 415
           LPVA+S+ + REATF+ AN+KAQGTV+GTVYGVLGCF+F R L IRFLSL+PWFIFT+FL
Sbjct: 436 LPVAVSYVSGREATFRAANVKAQGTVIGTVYGVLGCFVFNRLLSIRFLSLLPWFIFTSFL 495

Query: 416 RRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRA 475
           +RSRMYG AGGISAVIGAVLILGRKN GPPSEFAI RI+ETFIGLSCSI +DLLF P RA
Sbjct: 496 QRSRMYGPAGGISAVIGAVLILGRKNIGPPSEFAIERIIETFIGLSCSIFVDLLFWPKRA 555

Query: 476 STLAKVQLSKSLATLHDCIGSMSLQSSQASWL-ENQKRLKMQVTELAKFIGEAEVEPNFW 534
           ST AK +LS+ L TL + IG++SL     S L ENQ++LK QV EL KF+ EAE EPNFW
Sbjct: 556 STCAKYELSQCLFTLVETIGTLSLVGKTDSQLEENQRKLKAQVNELRKFVVEAEAEPNFW 615

Query: 535 FFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKE 594
           F PFH  CY++LLG+L+K+VD+L F   ++  L+Q+ QR      N V+ L S+L  +KE
Sbjct: 616 FLPFHSGCYNRLLGSLSKLVDVLHFGERALKSLQQEFQRS----DNFVNMLQSELLHVKE 671

Query: 595 KVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNG-ISDLDEAAMGKLICS 653
            + SSIK  E+++ +KS   +EKE+EK N+S D+E+GKS+  +  +S L E    ++I +
Sbjct: 672 IICSSIKGLEEISKMKSFKFVEKEIEKKNMSSDVEMGKSREDDTWLSGLGEDGTREIIET 731

Query: 654 YLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPS 713
           +LQ ++++V+K+ + EGEKE++S+VVL+LS +G+C+   +  T  IE+ ++ELVQWENPS
Sbjct: 732 FLQRSRDVVEKLYSDEGEKEVKSEVVLNLSVVGFCLNVCMHGTIEIEKAMRELVQWENPS 791

Query: 714 SNV 716
           S++
Sbjct: 792 SSI 794

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547238|ref|XP_003542023.1| PREDICTED: uncharacterized protein LOC100785658 [Glycine max]

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/726 (55%), Positives = 530/726 (73%), Gaps = 18/726 (2%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALP--EGTHMKAKRIALGQ 58
           +ALYAT Q++GPA+LSL  +GP RF+  T+A AVALAA+VV LP  + TH+ AKR++LGQ
Sbjct: 68  LALYATFQSMGPAMLSLWAVGPGRFSKATSAAAVALAAFVVVLPWPQSTHLIAKRVSLGQ 127

Query: 59  IVITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSE 118
           IV+ YV+ + NG  T+ +MHP+ +AASTA+GV ACV+AL LPYPRLA  Q+ ++ K L++
Sbjct: 128 IVLVYVVAYANGVHTDPIMHPISLAASTALGVLACVVALLLPYPRLASSQMNQSYKRLTK 187

Query: 119 NSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLR 178
           N  +RLKL VK  C ED  +A+  +S AK L    TK +  I RY E M+WERLP+K  R
Sbjct: 188 NILKRLKLLVKVICEEDKITAVGLMSHAKSLVTKRTKLLSIIIRYNEGMQWERLPIKIFR 247

Query: 179 SYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSC 238
           S+ ++  E+LQ+++  L+GM++A+    SFP+ ILD + K  +  L+EH++LTIKQA+  
Sbjct: 248 SHCLSLIERLQEVDTNLRGMELALACTNSFPINILDQDFKHGLNSLEEHVTLTIKQAKQS 307

Query: 239 ---DSLTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKD 295
               SLTVPESNA+    FLQ+L  IPTT QELS  FFLFC KLL  K S  +   C +D
Sbjct: 308 LRDGSLTVPESNAKTTTHFLQSLHTIPTTYQELSICFFLFCAKLLH-KKSLTEPPTCTQD 366

Query: 296 DTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSG 355
             VK+     NG S KE  +N    +++  L+PA K SLSLGL+V  GL+YSK NG W+G
Sbjct: 367 LLVKK-----NGNSPKEKLANLIATLRNTNLMPAIKFSLSLGLSVFMGLIYSKENGFWAG 421

Query: 356 LPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFL 415
           LPVA+S+ + REATF+ AN+KAQGTVLGTVYGVLGCF+FERFLPIRFLSL+PWFIFT+FL
Sbjct: 422 LPVAVSYVSGREATFRAANVKAQGTVLGTVYGVLGCFVFERFLPIRFLSLLPWFIFTSFL 481

Query: 416 RRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRA 475
           +RS+MYG AGGISAVIGA+LILGRKNFGPPSEFA+ARI+ETFIGLSCSI +DL+F P RA
Sbjct: 482 QRSKMYGPAGGISAVIGAILILGRKNFGPPSEFALARIIETFIGLSCSIFVDLIFWPKRA 541

Query: 476 STLAKVQLSKSLATLHDCIGSMSLQSSQASWLE-NQKRLKMQVTELAKFIGEAEVEPNFW 534
           ST +K +LS+ LATL + IGS+SL  +  + LE NQ++LKMQV EL KF+ EAE+EPN W
Sbjct: 542 STCSKTELSQCLATLGESIGSLSLLVAGKTNLEDNQRKLKMQVNELRKFVVEAEMEPNLW 601

Query: 535 FFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKE 594
           F PF+  CY+KLLG+L+++VDL+ F  H++ FL+Q+ QR     K +V+ L+ +L  +K+
Sbjct: 602 FLPFNSVCYNKLLGSLSRVVDLMRFGEHALKFLQQEFQRCGACEKEDVNMLEGELGHVKD 661

Query: 595 KVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNG---ISDLDEAAMGKLI 651
            + SSIK  E++++ K +A   KE+EKNN S DLE GKS   N    IS L E  + + I
Sbjct: 662 LICSSIKNIEEISSTKFVA---KEVEKNNNSCDLEAGKSNWGNNTCMISRLGEDGIEQTI 718

Query: 652 CSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWEN 711
            S+LQ ++ +VD +   EGE E++S VVLSLSA+G+C+   I+ T  IEE IKELVQWEN
Sbjct: 719 GSFLQRSRIVVDNLYGDEGENEMKSHVVLSLSAVGFCLSACIQGTMEIEEAIKELVQWEN 778

Query: 712 PSSNVN 717
           PSS ++
Sbjct: 779 PSSEID 784

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684006|ref|NP_180444.2| uncharacterized protein [Arabidopsis thaliana] gi|28393386|gb|AAO42117.1| unknown protein [Arabidopsis thaliana] gi|30793957|gb|AAP40430.1| unknown protein [Arabidopsis thaliana] gi|330253076|gb|AEC08170.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/741 (53%), Positives = 539/741 (72%), Gaps = 28/741 (3%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEG-THMKAKRIALGQI 59
           +ALYAT Q+VGPAI++LKLI PAR T+ TTALA ALAA+VV LP   TH+ AKRIALGQI
Sbjct: 71  LALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQI 130

Query: 60  VITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSEN 119
           V+ YVIG++ G +T+ VMHPL VAASTA+GV ACVLAL +P PRLA C+VK++CK L +N
Sbjct: 131 VLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKELGQN 190

Query: 120 SSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLR- 178
            + R+KLY+KAFC++D+ SA AS+SQA++L    +K  Q +KRYQ SM WERLP K  R 
Sbjct: 191 VTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKIWRW 250

Query: 179 -SYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQS 237
            +   N GEKLQ +EI L+GM+M V S +  P  +L GE+KE +K + E + L+IK+  +
Sbjct: 251 QNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKRVNN 310

Query: 238 CDSLTV-PESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWK--SSPNQSTNCLK 294
               +V PES+ ++  + LQTLQ IP T Q+L  YFFLFC++LL+    + P       +
Sbjct: 311 SSQPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLETIIIAKP-------E 363

Query: 295 DDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWS 354
           ++ VK  E   N F  +   S+W     SK+++PA K SLSLGLA+L G ++SKPNG W+
Sbjct: 364 ENKVKVLE---NKFKTRSWISDWD----SKKIMPALKLSLSLGLAILLGSMFSKPNGYWA 416

Query: 355 GLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAF 414
           GLPVA+SFAAAREATFKV N+KAQGTV+GTVYGV+GCF+F++FL +RFLSL+PWF+F++F
Sbjct: 417 GLPVAVSFAAAREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSF 476

Query: 415 LRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTR 474
           L RS+MYGQAGGISA IGAVLILGRKNFGPPSEFAI RI+ETFIGLSCSIM++L+FQPTR
Sbjct: 477 LSRSKMYGQAGGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTR 536

Query: 475 ASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFW 534
           A+ +AK++LS+S   L++C      ++S+A  +E+QK+L+  + EL KF  EA  EP+FW
Sbjct: 537 AANIAKLELSRSFHALYECASLFGAKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFW 596

Query: 535 FFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKE 594
           F PF+ +CY KL  +L+KM DLL F+ +++GFL +  +  +   K  +  +D DL+ L E
Sbjct: 597 FSPFNFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQGKTKSPQCKEILSNVDKDLKSLTE 656

Query: 595 KVGSSIKCFEDVTTIKSLATIEKELEK-NNISYDLELGKSKNPNGISDLDEAAMGKLICS 653
            +G   K FE++T +KSL  +EK L K +N S+D+ELGK+ NP+  + + E    K++ +
Sbjct: 657 SIGLLAKSFEEITLLKSLDALEKALAKSDNTSWDIELGKTPNPSFSTAVSEPE--KILET 714

Query: 654 YLQHAKELVDKI-----KATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQ 708
           YLQH + + D +        E  +  +S+VVLSL ALG+C++ + +ET+ IEE +KE+VQ
Sbjct: 715 YLQHCRSVADGLFRVEEDGEEEVEVDKSEVVLSLCALGFCVERIGKETREIEEMVKEVVQ 774

Query: 709 WENPSSNVNLLEISCKINALY 729
            ENPSS+VNL EISCKI +LY
Sbjct: 775 SENPSSHVNLHEISCKIRSLY 795

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3927826|gb|AAC79583.1| hypothetical protein [Arabidopsis thaliana]

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/741 (53%), Positives = 539/741 (72%), Gaps = 28/741 (3%)

Query: 1   MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEG-THMKAKRIALGQI 59
           +ALYAT Q+VGPAI++LKLI PAR T+ TTALA ALAA+VV LP   TH+ AKRIALGQI
Sbjct: 69  LALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQI 128

Query: 60  VITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSEN 119
           V+ YVIG++ G +T+ VMHPL VAASTA+GV ACVLAL +P PRLA C+VK++CK L +N
Sbjct: 129 VLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKELGQN 188

Query: 120 SSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLR- 178
            + R+KLY+KAFC++D+ SA AS+SQA++L    +K  Q +KRYQ SM WERLP K  R 
Sbjct: 189 VTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKIWRW 248

Query: 179 -SYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQS 237
            +   N GEKLQ +EI L+GM+M V S +  P  +L GE+KE +K + E + L+IK+  +
Sbjct: 249 QNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKRVNN 308

Query: 238 CDSLTV-PESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWK--SSPNQSTNCLK 294
               +V PES+ ++  + LQTLQ IP T Q+L  YFFLFC++LL+    + P       +
Sbjct: 309 SSQPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLETIIIAKP-------E 361

Query: 295 DDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWS 354
           ++ VK  E   N F  +   S+W     SK+++PA K SLSLGLA+L G ++SKPNG W+
Sbjct: 362 ENKVKVLE---NKFKTRSWISDWD----SKKIMPALKLSLSLGLAILLGSMFSKPNGYWA 414

Query: 355 GLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAF 414
           GLPVA+SFAAAREATFKV N+KAQGTV+GTVYGV+GCF+F++FL +RFLSL+PWF+F++F
Sbjct: 415 GLPVAVSFAAAREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSF 474

Query: 415 LRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTR 474
           L RS+MYGQAGGISA IGAVLILGRKNFGPPSEFAI RI+ETFIGLSCSIM++L+FQPTR
Sbjct: 475 LSRSKMYGQAGGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTR 534

Query: 475 ASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFW 534
           A+ +AK++LS+S   L++C      ++S+A  +E+QK+L+  + EL KF  EA  EP+FW
Sbjct: 535 AANIAKLELSRSFHALYECASLFGAKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFW 594

Query: 535 FFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKE 594
           F PF+ +CY KL  +L+KM DLL F+ +++GFL +  +  +   K  +  +D DL+ L E
Sbjct: 595 FSPFNFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQGKTKSPQCKEILSNVDKDLKSLTE 654

Query: 595 KVGSSIKCFEDVTTIKSLATIEKELEK-NNISYDLELGKSKNPNGISDLDEAAMGKLICS 653
            +G   K FE++T +KSL  +EK L K +N S+D+ELGK+ NP+  + + E    K++ +
Sbjct: 655 SIGLLAKSFEEITLLKSLDALEKALAKSDNTSWDIELGKTPNPSFSTAVSEPE--KILET 712

Query: 654 YLQHAKELVDKI-----KATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQ 708
           YLQH + + D +        E  +  +S+VVLSL ALG+C++ + +ET+ IEE +KE+VQ
Sbjct: 713 YLQHCRSVADGLFRVEEDGEEEVEVDKSEVVLSLCALGFCVERIGKETREIEEMVKEVVQ 772

Query: 709 WENPSSNVNLLEISCKINALY 729
            ENPSS+VNL EISCKI +LY
Sbjct: 773 SENPSSHVNLHEISCKIRSLY 793

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	730
TAIR|locus:2053200	796	AT2G28780 [Arabidopsis thalian	0.979	0.898	0.492	2.3e-181
TAIR|locus:2074889	775	AT3G09450 [Arabidopsis thalian	0.927	0.873	0.348	5.4e-102

TAIR|locus:2053200 AT2G28780 [Arabidopsis thaliana (taxid:3702)]

 Score = 1760 (624.6 bits), Expect = 2.3e-181, P = 2.3e-181
 Identities = 364/739 (49%), Positives = 497/739 (67%)

Query:     1 MALYATVQTVGPAILSLKLIGPARFTSXXXXXXXXXXXXXXXXPEG-THMKAKRIALGQI 59
             +ALYAT Q+VGPAI++LKLI PAR T+                P   TH+ AKRIALGQI
Sbjct:    71 LALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQI 130

Query:    60 VITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSEN 119
             V+ YVIG++ G +T+ VMHPL VAASTA+GV ACVLAL +P PRLA C+VK++CK L +N
Sbjct:   131 VLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKELGQN 190

Query:   120 SSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRS 179
              + R+KLY+KAFC++D+ SA AS+SQA++L    +K  Q +KRYQ SM WERLP K  R 
Sbjct:   191 VTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKIWRW 250

Query:   180 YYMNP--GEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQS 237
               +N   GEKLQ +EI L+GM+M V S +  P  +L GE+KE +K + E + L+IK+  +
Sbjct:   251 QNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKRVNN 310

Query:   238 CDSLTV-PESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
                 +V PES+ ++  + LQTLQ IP T Q+L  YFFLFC++LL+         N +K  
Sbjct:   311 SSQPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLETIIIAKPEENKVK-- 368

Query:   297 TVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCXXXXXXXXXXXXXYSKPNGIWSGL 356
              V E     N F  +   S+W     SK+++PA K              +SKPNG W+GL
Sbjct:   369 -VLE-----NKFKTRSWISDWD----SKKIMPALKLSLSLGLAILLGSMFSKPNGYWAGL 418

Query:   357 PVAISFAAAREATFKVANIKAQXXXXXXXXXXXXCFLFERFLPIRFLSLIPWFIFTAFLR 416
             PVA+SFAAAREATFKV N+KAQ            CF+F++FL +RFLSL+PWF+F++FL 
Sbjct:   419 PVAVSFAAAREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSFLS 478

Query:   417 RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS 476
             RS+MYGQAGGISA IGAVLILGRKNFGPPSEFAI RI+ETFIGLSCSIM++L+FQPTRA+
Sbjct:   479 RSKMYGQAGGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTRAA 538

Query:   477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFF 536
              +AK++LS+S   L++C      ++S+A  +E+QK+L+  + EL KF  EA  EP+FWF 
Sbjct:   539 NIAKLELSRSFHALYECASLFGAKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFWFS 598

Query:   537 PFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHXXXXXXXXXXXXV 596
             PF+ +CY KL  +L+KM DLL F+ +++GFL +  +  +   K  +             +
Sbjct:   599 PFNFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQGKTKSPQCKEILSNVDKDLKSLTESI 658

Query:   597 GSSIKCFEDVTTIKSLATIEKELEKN-NISYDLELGKSKNPNGISDLDEAAMGKLICSYL 655
             G   K FE++T +KSL  +EK L K+ N S+D+ELGK+ NP+  + + E    K++ +YL
Sbjct:   659 GLLAKSFEEITLLKSLDALEKALAKSDNTSWDIELGKTPNPSFSTAVSEPE--KILETYL 716

Query:   656 QHAKELVDKIKATE--GEKEL---RSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWE 710
             QH + + D +   E  GE+E+   +S+VVLSL ALG+C++ + +ET+ IEE +KE+VQ E
Sbjct:   717 QHCRSVADGLFRVEEDGEEEVEVDKSEVVLSLCALGFCVERIGKETREIEEMVKEVVQSE 776

Query:   711 NPSSNVNLLEISCKINALY 729
             NPSS+VNL EISCKI +LY
Sbjct:   777 NPSSHVNLHEISCKIRSLY 795

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009734 "auxin mediated signaling pathway" evidence=RCA

TAIR|locus:2074889 AT3G09450 [Arabidopsis thaliana (taxid:3702)]

 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 247/709 (34%), Positives = 377/709 (53%)

Query:     4 YATVQTVGPAILSLKLIGPARFTSXXXX-XXXXXXXXXXXXPEGTHMKAKRIALGQIVIT 62
             YAT QT+  A++S+ ++GPA   +                 P  T +  KRIA GQIV+ 
Sbjct:    72 YATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAFGQIVVV 131

Query:    63 YVIGFV-NGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSS 121
             YV   V NGE     M P+HVA STA+G  A ++A+ LP+PRLA  Q+ K CKL +EN+ 
Sbjct:   132 YVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKLYAENAL 191

Query:   122 ERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFL-RSY 180
             ERL ++V+   A DNT+A   I++A  L+      ++NIK + E + WER   +FL R  
Sbjct:   192 ERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTRFLSRKQ 251

Query:   181 YMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDS 240
              ++P EKL   +  L+G+++A+ S +SFP  +   EL   ++    HI+    +++S   
Sbjct:   252 KLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLLEGPRTHIA---PRSES--- 305

Query:   241 LTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKS-SPNQSTNCLKDDTVK 299
              T+    ++D + +    +++ T    L   FF +C++L +    S  Q +  +   T +
Sbjct:   306 -TL---KSQDSLGWHHEAESLSTAA--LPVCFFRYCVELFRGDFLSLRQDSKSVNGRTTE 359

Query:   300 EYEGSSN-GFSF-KEVWSNWSMKVKSKRLVPAFKCXXXXXXXXXXXXXYSKPNGIWSGLP 357
             E    +N G S  ++ W    + +  +R V AFKC             Y+K NG WSGL 
Sbjct:   360 EEIHPANEGLSMARKFWDILCVWMARERFVFAFKCSISLGLAVLFGILYNKNNGYWSGLT 419

Query:   358 VAISFAAAREATFKVANIKAQXXXXXXXXXXXXCFLFERFLPIRFLSLIPWFIFTAFLRR 417
             VAIS  + R+AT  VAN + Q            C +F+R    RFL L+PW I   F+R 
Sbjct:   420 VAISLVSGRQATLTVANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWIILAVFMRH 479

Query:   418 SRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAST 477
             S++YGQ GG++A I A+LILGR+N+G P+EFAIARIVE  IGL C +  ++L  P RA+T
Sbjct:   480 SKVYGQPGGVTAAIAALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILVTPARAAT 539

Query:   478 LAKVQLSKSLATLHDCIGSMSLQSSQ------ASWLENQKRLKMQVTELAKFIGEAEVEP 531
             LA+ ++S  L  L DCI S+ L S Q      A   ++Q +LK  V  L +F  EA  EP
Sbjct:   540 LARTEISHCLDALLDCIQSLVLCSEQKNQKVVADLRKSQVKLKSHVEALERFAAEALTEP 599

Query:   532 NFWFFP-FHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHXXXXXXX 590
                F    +   Y++LLG+ +K+ DL L+    +  L      +A  W N  H       
Sbjct:   600 KIPFLRRLNTDSYNRLLGSFSKISDLCLYVCDGLKNLSGVQPTLAFPWDNITHELRAFQE 659

Query:   591 XXXXXVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN-GISDL--DEAAM 647
                  +  S+KC ++++  KS A ++KEL+K  I +D+E G + N N    +L   +A +
Sbjct:   660 K----LHPSVKCLKEISQTKSQARLQKELQKRKICHDVEAGTTSNDNYSYMELGPSQADV 715

Query:   648 GKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRET 696
              +   S++   KE  DKI     +   +S+  L LS+LG+C+  L++ET
Sbjct:   716 ERFSVSFVMLLKEATDKISCNTADDAFKSETALCLSSLGFCISRLMQET 764


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      730       677   0.00078  121 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  358 KB (2177 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  53.83u 0.09s 53.92t   Elapsed:  00:00:03
  Total cpu time:  53.83u 0.09s 53.92t   Elapsed:  00:00:03
  Start:  Fri May 10 01:04:44 2013   End:  Fri May 10 01:04:47 2013

GO:0005886 "plasma membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	730
pfam13515	125	pfam13515, FUSC_2, Fusaric acid resistance protein	1e-14
COG4129	332	COG4129, COG4129, Predicted membrane protein [Func	2e-06
COG1289	674	COG1289, COG1289, Predicted membrane protein [Func	2e-05
pfam04632	649	pfam04632, FUSC, Fusaric acid resistance protein f	7e-04

>gnl|CDD|222189 pfam13515, FUSC_2, Fusaric acid resistance protein-like

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)

Query: 338 LAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERF 397
           LAVL  LL   P+G W+ L   I       AT + A  +  GTVLG + G L  +L    
Sbjct: 1   LAVLIALLLGLPHGYWAPLTAVIVLQPTLGATVRRAKQRILGTVLGVLLGALLLYLLP-- 58

Query: 398 LPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETF 457
            P++ + L+    F AF    R Y  A      +   L+L     G P E A+ R+++T 
Sbjct: 59  SPLQLILLLALLGFLAFYFLGRNYALATIFITPL--ALLLASLAGGGPIELALLRLLDTL 116

Query: 458 IGLSCSIMI 466
           IG+  ++++
Sbjct: 117 IGILIALLV 125

Length = 125

>gnl|CDD|226614 COG4129, COG4129, Predicted membrane protein [Function unknown]

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 7/151 (4%)

Query: 322 KSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTV 381
             K      K  L+ GLA+L   L   P   ++G+   +  +   + + K A  +  G  
Sbjct: 6   MRKIGARTLKTGLAAGLALLIAHLLGLPQPAFAGISAVLCLSPTIKRSLKRALQRLLGNA 65

Query: 382 LGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKN 441
           LG +  VL   LF +      + L+   I    L   ++      I+  +  +L+     
Sbjct: 66  LGAILAVLFFLLFGQNPIAFGVVLL---IIIPLLVLLKLENGVVPITVGVLHILVAA--- 119

Query: 442 FGPPSEFAIARIVETFIGLSCSIMIDLLFQP 472
              P      R +  F+G+  + +++L+  P
Sbjct: 120 -MIPLFLIFNRFLLVFVGVGVAFLVNLVMPP 149

Length = 332

>gnl|CDD|224208 COG1289, COG1289, Predicted membrane protein [Function unknown]

 Score = 47.8 bits (114), Expect = 2e-05
 Identities = 44/199 (22%), Positives = 74/199 (37%), Gaps = 15/199 (7%)

Query: 322 KSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFA-AAREATFKVANIKAQGT 380
            S  L  A + +L+L L   F L    P+G W  L  A+     A  AT + A  +    
Sbjct: 351 NSPALRHALRTALALLLGYAFWLALGWPHGYWILLTAAVVCQPNAYGATRQRARQRI--- 407

Query: 381 VLGTVYGVLGCFLFERFLP--IRFLSLIPWFI---FTAFLRRSR-MYGQAGGISAVIGAV 434
            LGT+ G+L   L    L   I  L L+       F A +R ++      G    V+  V
Sbjct: 408 -LGTLLGLLLGLLVLLLLLPLIPGLLLLLLLAALLFAAGIRLAKYRLATLGITLLVLFLV 466

Query: 435 LILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCI 494
            +LG        ++ + R ++T +G   ++ +  L  P       +  L ++L  L   +
Sbjct: 467 GLLG----SNGPDYDLPRFLDTLLGSLIALALAFLVWPLWRPRRLRRALRRALRALRRDL 522

Query: 495 GSMSLQSSQASWLENQKRL 513
            S   +         +   
Sbjct: 523 ASALSREPTGRERRFEHNA 541

Length = 674

>gnl|CDD|218184 pfam04632, FUSC, Fusaric acid resistance protein family

 Score = 42.6 bits (101), Expect = 7e-04
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)

Query: 325 RLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAI----SFAAARE-ATFKVANIKAQG 379
           R + A K  L+  LA+   L    P   W+ + V I       A    + ++V      G
Sbjct: 1   RWLFALKTFLAAMLALYIALRLELPQPYWAMMTVFIVSQPLSGAVLSKSFYRVL-----G 55

Query: 380 TVLGTVYGVL--GCFLFERFLPIRFLSLIPW-FIFTA---FLRRSRMYG-QAGGISAVIG 432
           T++G    V     F+    L    L+L  W  + TA     R  R Y     G +A I 
Sbjct: 56  TLVGAAAAVALVALFVQAPLL--FLLALALWIGLCTALSLLDRNFRSYAFVLAGYTAAII 113

Query: 433 AVLILGRKNFGPPSEF--AIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLA 488
           A+  +      P + F  A+AR+ E  +G+ C+ ++  LF P       + +L   L 
Sbjct: 114 ALPAVT----DPETIFDIAVARVSEIALGILCAGLVSALFFPRSVGPALRARLRAWLR 167

This family includes a conserved region found in two proteins associated with fusaric acid resistance,from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins. Length = 649

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	730
PF11744	406	ALMT: Aluminium activated malate transporter; Inte	99.97
TIGR01666	704	YCCS hypothetical membrane protein, TIGR01666. Thi	99.96
TIGR01667	701	YCCS_YHJK integral membrane protein, YccS/YhfK fam	99.96
PF04632	650	FUSC: Fusaric acid resistance protein family; Inte	99.95
PRK10631	652	p-hydroxybenzoic acid efflux subunit AaeB; Provisi	99.94
PRK11427	683	multidrug efflux system protein MdtO; Provisional	99.89
COG1289	674	Predicted membrane protein [Function unknown]	99.8
PRK11427	683	multidrug efflux system protein MdtO; Provisional	99.74
COG4129	332	Predicted membrane protein [Function unknown]	99.71
KOG4711	625	consensus Predicted membrane protein [General func	99.68
PF04632	650	FUSC: Fusaric acid resistance protein family; Inte	99.65
COG1289	674	Predicted membrane protein [Function unknown]	99.57
PF13515	128	FUSC_2: Fusaric acid resistance protein-like	99.56
PF06081	141	DUF939: Bacterial protein of unknown function (DUF	99.56
PF10337	459	DUF2422: Protein of unknown function (DUF2422); In	99.03
PRK10631	652	p-hydroxybenzoic acid efflux subunit AaeB; Provisi	98.83
PF12805	284	FUSC-like: FUSC-like inner membrane protein yccS	98.57
PF10334	229	DUF2421: Protein of unknown function (DUF2421); In	98.36
TIGR01667	701	YCCS_YHJK integral membrane protein, YccS/YhfK fam	98.34
TIGR01666	704	YCCS hypothetical membrane protein, TIGR01666. Thi	98.24
PF11744	406	ALMT: Aluminium activated malate transporter; Inte	98.18
PF11168	140	DUF2955: Protein of unknown function (DUF2955); In	97.32
PF10337	459	DUF2422: Protein of unknown function (DUF2422); In	95.25
TIGR02865	764	spore_II_E stage II sporulation protein E. Stage I	92.76
PF10334	229	DUF2421: Protein of unknown function (DUF2421); In	85.82
PF12805	284	FUSC-like: FUSC-like inner membrane protein yccS	80.7

>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana []

Probab=99.97  E-value=7.3e-30  Score=280.89  Aligned_cols=344  Identities=17%  Similarity=0.193  Sum_probs=244.3

Q ss_pred             cccc-ccchhHHHHHHHHHHHHHHHHHHHhcC-----CCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 004796          317 WSMK-VKSKRLVPAFKCSLSLGLAVLFGLLYS-----KPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLG  390 (730)
Q Consensus       317 w~~~-~~~~~l~~AlK~alA~~La~~la~~~~-----l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~  390 (730)
                      |+.. -|++++.|++|+++|+++..++.+.-.     ..++.||++||++|+.|++|+|+.||++|++||++||++|+++
T Consensus         1 w~~g~~d~rr~~~~lkvglal~lvsl~~~~~~~~~~~~~~~~WavlTVvvvfe~tvGatl~KG~nR~lGTl~aG~La~~~   80 (406)
T PF11744_consen    1 WKFGKDDPRRVIHSLKVGLALTLVSLLYFVGPLYDGFGQNAMWAVLTVVVVFEPTVGATLSKGLNRGLGTLLAGILAFGV   80 (406)
T ss_pred             CcccccCcchhhhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHhhhHhhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5554 688999999999999999987754321     2589999999999999999999999999999999999999999


Q ss_pred             HHHhcc-----hhHHHHHHHHHHHHHHHHHhhhh----hhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHH
Q 004796          391 CFLFER-----FLPIRFLSLIPWFIFTAFLRRSR----MYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLS  461 (730)
Q Consensus       391 ~~l~~~-----~~~l~~l~L~~wi~~~~fl~~~~----~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiv  461 (730)
                      ..+...     .+..+.+.++++.++.+|++...    .|.|++.+..+|..+|.++....++....|..|+..|.+|++
T Consensus        81 ~~la~~~g~~~~~~~i~~~vFi~~~~atf~r~~P~~k~rydYg~~Vf~LTf~lV~vs~yr~~~~~~~A~~R~~~I~iGv~  160 (406)
T PF11744_consen   81 SWLASLSGDPGEPIVIGISVFIIGFIATFVRFIPKIKARYDYGGLVFILTFCLVAVSGYRTDEFLMLAVWRLLTIVIGVA  160 (406)
T ss_pred             HHHHHhcCccchhHHHHHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHhheeecCCcchHHHHHHHHHHHHHHHHH
Confidence            877653     24455666777777788888432    388888888888888888854455556999999999999999


Q ss_pred             HHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHhhhc----cCCc----------hhHHHHHHHHHHHHHHHHHHHHHh
Q 004796          462 CSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSL----QSSQ----------ASWLENQKRLKMQVTELAKFIGEA  527 (730)
Q Consensus       462 iallV~~ll~P~ra~~~lr~~L~~~l~~l~~~~~~l~~----~~~~----------~~l~e~~~~l~~~L~~L~~ll~eA  527 (730)
                      ++++|+.++||.|++..+++.+.+.++.+++.++....    ...+          +..-+..+.+...-++-+.++..|
T Consensus       161 i~l~vsi~IfPvwAg~~Lh~~~a~~leklA~~le~~v~~y~~~~~~~~~~~~~~~~~~~~~~yk~vl~Sk~~eesL~~~A  240 (406)
T PF11744_consen  161 ICLLVSIFIFPVWAGEDLHKLTAKNLEKLANSLEGCVEEYFKCSEDEILDYQQESDDPLLQGYKSVLNSKSQEESLANFA  240 (406)
T ss_pred             HHHHHHHheeechhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhcccccccccccHHHHhhhHHhCCcccHHHHhhhh
Confidence            99999999999999999999999999988877765421    0000          011111222222223345555555


Q ss_pred             hcCCCCC--CCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhhhhhhHHHHHHHHHhhhhhccchhh
Q 004796          528 EVEPNFW--FFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSIKCFED  605 (730)
Q Consensus       528 ~~Ep~~~--~~pf~~~~y~~ll~sl~Rl~dlL~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~  605 (730)
                      ++||...  ..+||++.|.++-..+++..-.                                +..+|+|+.+.++++++
T Consensus       241 ~WEP~HG~f~f~~Pw~~Y~kig~~lR~cay~--------------------------------v~AL~gcl~seiq~p~~  288 (406)
T PF11744_consen  241 RWEPPHGRFRFRHPWKQYLKIGALLRHCAYC--------------------------------VEALHGCLNSEIQAPPE  288 (406)
T ss_pred             hhcccccCCccCCcHHHHHHHHHHHHHHHHH--------------------------------HHHHHhcccccccccHH
Confidence            5555431  1234555555544433332211                                12368899999999999


Q ss_pred             Hhhhh--hHHHHHHHHhh--cccccchhcCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhchhh-----------
Q 004796          606 VTTIK--SLATIEKELEK--NNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKELVDKIKATEG-----------  670 (730)
Q Consensus       606 ~~~~~--~l~~l~~~~~~--~~~~~d~e~~~~~~~~~~~~~~~~~~~~~~~sf~~~~~~~~~~~~~~~~-----------  670 (730)
                      ++++.  ...++..|..+  |.++..+.+|+++++-      ++        -+.+.++++++|+..-+           
T Consensus       289 ~r~~~~~~~~~~~~e~~kvLrel~~~ik~m~~~~~~------~~--------~~~~~~~A~~~Lq~~l~~~~~ll~~s~~  354 (406)
T PF11744_consen  289 LRQKFQEECTRVSSESAKVLRELSNSIKTMTKSSSI------DD--------HVANLKEAAEDLQSKLDSQSYLLLNSES  354 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc------hh--------HHHHHHHHHHHHHHHHHhCCccccCCch
Confidence            98866  88888888888  8889999999998531      11        12344444444443110           


Q ss_pred             ---------------hhhhhhhhhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 004796          671 ---------------EKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKEL  706 (730)
Q Consensus       671 ---------------~~~~~~~~~~~~~~~~fc~~~~~~e~~~~~~~~~~l  706 (730)
                                     .+....-.++.+..+..-+-|+.-=+..|.+.+.||
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~l~lat~aSlLie~v~r~~~iv~~v~eL  405 (406)
T PF11744_consen  355 PERSFLRPQSSKEAEWTSYELLEALPLATFASLLIEFVARLENIVEAVEEL  405 (406)
T ss_pred             hhhhhccccccccccccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                           122345567788888887888888888888888887

; GO: 0010044 response to aluminum ion

>TIGR01666 YCCS hypothetical membrane protein, TIGR01666

Probab=99.96  E-value=2e-25  Score=261.59  Aligned_cols=235  Identities=16%  Similarity=0.099  Sum_probs=177.1

Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 004796          318 SMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERF  397 (730)
Q Consensus       318 ~~~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~  397 (730)
                      ++++++..+|||+|++++++++++++.+++.++|||+++|+++|+||++|+|+.|+++|++||++|+++|+++.++++..
T Consensus       373 ~l~~~S~~fRhAlRlalal~~a~~i~~~l~l~~gyWi~LTv~~V~qP~~~~T~~R~~~Ri~GTllG~~lg~~ll~l~p~~  452 (704)
T TIGR01666       373 HFTFESPLFRHAVRLSIVLFLGYAIIQFFGFNLGYWILLTTLFVCQPNYSATKVRLRQRIIGTLLGVVIGSPLLYFNPSL  452 (704)
T ss_pred             hCCCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            34589999999999999999999999999999999999999999999999999999999999999999999999887774


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhhh-hHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcccCCcch
Q 004796          398 LPIRFLSLIPWFIFTAFLRRSRMYGQA-GGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS  476 (730)
Q Consensus       398 ~~l~~l~L~~wi~~~~fl~~~~~Yg~a-g~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~  476 (730)
                      .....+.++  .+...+....+.|+++ ..+|.+   ++++. ...|++.++++.|++||+||+++|+++.+++||.|..
T Consensus       453 ~~~l~liv~--~~~l~~~~~~~~Y~~a~~fiT~~---vll~~-~l~g~~~~~~~~Rl~dTlIG~~iAl~a~~li~P~w~~  526 (704)
T TIGR01666       453 ELQLVLVVL--TGVLFFAFRSNNYSFATFFITLL---VLLCF-NVLGEGAAVLLPRLLDTLIGCAIAWAAVSYIWPDWQY  526 (704)
T ss_pred             HHHHHHHHH--HHHHHHHHHHHhHHHHHHHHHHH---HHHHH-HcccchHHHHHHHHHHHHHHHHHHHHHHHHhCcchHH
Confidence            332222211  1112222233567764 334443   22222 2345566889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc--CC---chhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHHH
Q 004796          477 TLAKVQLSKSLATLHDCIGSMSLQ--SS---QASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLT  551 (730)
Q Consensus       477 ~~lr~~L~~~l~~l~~~~~~l~~~--~~---~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~~~~pf~~~~y~~ll~sl~  551 (730)
                      +.+++.+.+.+++..++++.+...  .+   +...+..||++....++++..+..+..||. +..+ ..+.--+++....
T Consensus       527 ~~l~~~~~~al~a~~~Yl~~vl~~~~~g~~~~~~yr~aRR~a~~~~a~l~~~~~~m~~EP~-~~~~-~~~~~~~ll~~~~  604 (704)
T TIGR01666       527 LQLDKVSHQALRANAVYLLHIISQYQFGKSDDLKYRIARRNAHNYDAALSTTVSNMNNEPV-KYKA-YLQKGFRLLKLNH  604 (704)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-cchh-hHHHHHHHHHHHH
Confidence            999999999999999998776321  11   223467789999999999999999999998 2322 2222223334445


Q ss_pred             HHHHHHHHH
Q 004796          552 KMVDLLLFA  560 (730)
Q Consensus       552 Rl~dlL~~~  560 (730)
                      ++++-+..+
T Consensus       605 ~llsyisaL  613 (704)
T TIGR01666       605 SLLSYISAL  613 (704)
T ss_pred             HHHHHHHHH
Confidence            555555443

This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.

>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family

Probab=99.96  E-value=9.7e-26  Score=264.89  Aligned_cols=234  Identities=20%  Similarity=0.176  Sum_probs=179.4

Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 004796          319 MKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFL  398 (730)
Q Consensus       319 ~~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~  398 (730)
                      +++++..+|||+|++++++++++++.+++.++|||+++|+++|+||+.|+|++|+++|++||++|+++|+++.++++...
T Consensus       376 l~~~S~~fRhAlR~ala~~~a~~i~~~l~l~~gyWi~lTv~~V~qP~~~~T~~R~~~Ri~GTl~G~llg~~l~~l~p~~~  455 (701)
T TIGR01667       376 LTPESPLFRHAVRLSLVVMLGYAILMGTALHLGYWILLTTLFVCQPNYGATRLRLVQRIIGTVVGLVIGVALHFLIPSLE  455 (701)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence            45889999999999999999999999999999999999999999999999999999999999999999999888877633


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhh-hHHHHHhhhhheecccCCC-CcHHHHHHHHHHHHHHHHHHHHHhhcccCCcch
Q 004796          399 PIRFLSLIPWFIFTAFLRRSRMYGQA-GGISAVIGAVLILGRKNFG-PPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS  476 (730)
Q Consensus       399 ~l~~l~L~~wi~~~~fl~~~~~Yg~a-g~ita~~~~iiil~~~~~~-~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~  476 (730)
                      .  .+.++++.+++.|....+.|+++ .++|..   +++.. ...+ ++.++++.|++||+||+++|+++++++||.|..
T Consensus       456 ~--~l~l~v~~~~~~~~~~~~~Y~~a~~fiT~~---vll~~-~l~~~~~~~~a~~Rl~DTliG~~iA~~~~~llwP~w~~  529 (701)
T TIGR01667       456 G--QLTLMVITGVAFFAFRSKNYGWATVFITLL---VLLCF-NLLGLDGEQYILPRLIDTLIGCLIAWGAVSYLWPDWQS  529 (701)
T ss_pred             H--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HHHHH-hhcccchhHHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence            3  22333344444443334568764 445443   22221 2334 445889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc--C---CchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHHH
Q 004796          477 TLAKVQLSKSLATLHDCIGSMSLQ--S---SQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLT  551 (730)
Q Consensus       477 ~~lr~~L~~~l~~l~~~~~~l~~~--~---~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~~~~pf~~~~y~~ll~sl~  551 (730)
                      +.+++++++.+++..++++.+...  .   ++.+.+..||++....++++..+..+..||.  +.+...+....++....
T Consensus       530 ~~l~~~~~~al~a~~~yl~~il~~~~~~~~~~~~yr~aRr~a~~a~a~l~~~~~~m~~EP~--~~~~~~~~~~~ll~~~~  607 (701)
T TIGR01667       530 RLLRKMLHDALEANQRYLRLILSQYPQGKPDDLAYRIARRNAHNTDAALSTTLSNMMQEPA--FNSHYLEDGFRLLTLSH  607 (701)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CchhhHHHHHHHHHHHH
Confidence            999999999999999988876321  1   1223466788899999999999999999998  23333334444445455


Q ss_pred             HHHHHHHHH
Q 004796          552 KMVDLLLFA  560 (730)
Q Consensus       552 Rl~dlL~~~  560 (730)
                      +++..+..+
T Consensus       608 ~ll~~isal  616 (701)
T TIGR01667       608 TLLSYISAL  616 (701)
T ss_pred             HHHHHHHHH
Confidence            555555443

TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane

>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate

Probab=99.95  E-value=2.6e-26  Score=269.62  Aligned_cols=201  Identities=24%  Similarity=0.430  Sum_probs=173.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 004796          325 RLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLS  404 (730)
Q Consensus       325 ~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l~  404 (730)
                      +++|++|+++|+++++++++++++|+||||++|+++|+||+.|.++.||++|++||++|+++|+++..++++.|.+.+++
T Consensus         1 ~~~~alr~~lA~~lAl~ia~~l~l~~p~WA~~tv~iV~qp~~G~~~~k~~~R~~GT~iGa~~~~~lv~~~~~~p~l~~~~   80 (650)
T PF04632_consen    1 RLRFALRTALAAMLALYIAFWLQLPHPYWAAMTVFIVSQPSSGASLSKGLYRLIGTLIGAAAGLLLVALFPQSPLLFLLA   80 (650)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHh----hhhhhhh-hhHHHHHhhhhheecccCCCCc---HHHHHHHHHHHHHHHHHHHHHhhcccCCcch
Q 004796          405 LIPWFIFTAFLR----RSRMYGQ-AGGISAVIGAVLILGRKNFGPP---SEFAIARIVETFIGLSCSIMIDLLFQPTRAS  476 (730)
Q Consensus       405 L~~wi~~~~fl~----~~~~Yg~-ag~ita~~~~iiil~~~~~~~p---~~~A~~Ri~ei~IGiviallV~~ll~P~ra~  476 (730)
                      +.+|+++|.|+.    +.+.|+. .+|||+.   +|.+.  ..++|   .+++++|+.+|+||++|+++|+.++||.+++
T Consensus        81 lal~i~~c~~~~~~~~~~~~y~~~lag~T~~---iv~~~--~~~~p~~~f~~a~~R~~ei~iGi~~a~~v~~l~~P~~~~  155 (650)
T PF04632_consen   81 LALWIGLCLYLSLLDRNFRSYAFMLAGYTAA---IVALP--AVGNPEQVFDLALWRVLEILIGILCATLVSMLFFPQRAR  155 (650)
T ss_pred             HHHHHHHHHHHHHhcCCcchHHHHHHHHHHH---HHHhh--cccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHH
Confidence            999999998876    4566765 4677766   55444  33445   3889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 004796          477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPN  532 (730)
Q Consensus       477 ~~lr~~L~~~l~~l~~~~~~l~~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~  532 (730)
                      ..+++++.+.++...+++........++  ...++++...+.+++.+...+..|..
T Consensus       156 ~~l~~~l~~~l~~~~~~~~~~l~~~~~~--~~~~~~l~~~~~~l~~~~~~~~~e~~  209 (650)
T PF04632_consen  156 RQLRRRLAQRLADLARWLAALLDGDPDP--AAERRRLARDIAALESLLSHARYESP  209 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCccc--chHHHHHHHHHHHHHHHHhhccccCc
Confidence            9999999999998888777653322111  11567788888999999999988875

It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane

>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional

Probab=99.94  E-value=1.1e-25  Score=260.71  Aligned_cols=208  Identities=20%  Similarity=0.279  Sum_probs=177.8

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhh---------cCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 004796          320 KVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISF---------AAAREATFKVANIKAQGTVLGTVYGVLG  390 (730)
Q Consensus       320 ~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~---------qp~~G~T~~~~~~RilGTvlGav~g~l~  390 (730)
                      .|+.++++|++|+++|+++++++++++++++||||++|++||+         ||..|.++.|+++|++||++|+++|+++
T Consensus         3 ~p~~~~~~falk~~lA~~LAL~ia~~l~L~~P~WA~~Tv~iv~~~~~~~~g~qp~~G~v~~K~~~Ri~GTliGa~~~l~l   82 (652)
T PRK10631          3 SIANQRLRFAVKLAFAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPFSGAIRYRGMLRIIGTFIGCIAALVI   82 (652)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHcccccccccCCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3788899999999999999999999999999999999999999         9999999999999999999999999999


Q ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHh----hhhhhhh-hhHHHHHhhhhheecccCCCCcH---HHHHHHHHHHHHHHHH
Q 004796          391 CFLFERFLPIRFLSLIPWFIFTAFLR----RSRMYGQ-AGGISAVIGAVLILGRKNFGPPS---EFAIARIVETFIGLSC  462 (730)
Q Consensus       391 ~~l~~~~~~l~~l~L~~wi~~~~fl~----~~~~Yg~-ag~ita~~~~iiil~~~~~~~p~---~~A~~Ri~ei~IGivi  462 (730)
                      ...|.+.|.+..+++.+|+++|.|..    +.+.|++ .+|||+.   +|++.  ..++|.   ++++.|+.||+|||+|
T Consensus        83 ~~~f~~~p~l~~l~l~lWig~c~~~s~l~r~~~sY~~~LaGyTa~---iI~~~--~~~~p~~~f~~A~~R~~Ei~iGi~c  157 (652)
T PRK10631         83 IIATIRAPLLMILLCCIWAGFCTWISSLVRVENSYAWGLAGYTAL---IIVIT--IQPEPLLTPQFAVERCSEIVIGIVC  157 (652)
T ss_pred             HHHhcCChHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH---HHHHh--ccCCchHHHHHHHHHHHHHHHHHHH
Confidence            99999999988899999999998754    5567876 5778776   55444  455553   8999999999999999


Q ss_pred             HHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 004796          463 SIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPN  532 (730)
Q Consensus       463 allV~~ll~P~ra~~~lr~~L~~~l~~l~~~~~~l~~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~  532 (730)
                      +.+|+.+++|.+....++..+.+.+....++.+........++.+..+.++-.++.+++.+...+..|..
T Consensus       158 a~lv~~l~~P~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~di~~le~lr~~~~~e~~  227 (652)
T PRK10631        158 AILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDKEEVDKAWGDLVRRTTALNGMRSNLMMESS  227 (652)
T ss_pred             HHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHhccCccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Confidence            9999999999999999999999998876666665532222344566678888899999999987766643

>PRK11427 multidrug efflux system protein MdtO; Provisional

Probab=99.89  E-value=2.2e-19  Score=207.32  Aligned_cols=208  Identities=15%  Similarity=0.145  Sum_probs=151.8

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc--h
Q 004796          321 VKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLF-ER--F  397 (730)
Q Consensus       321 ~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~-~~--~  397 (730)
                      -+...++||+|+++|+++++++...+++++|||+.+|+++|++|+.|.|.+|+++|++||++|+++|+++..+. ++  +
T Consensus       346 tNp~~~R~ALRt~lAa~La~~i~~~l~w~~pyWamLTvvIVsqP~~GaT~sRa~~RiiGTliGallA~ll~v~l~P~l~~  425 (683)
T PRK11427        346 TNPDYMRYALKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDN  425 (683)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            34457999999999999999999999999999999999999999999999999999999999999999988544 32  1


Q ss_pred             hHHHHHHHHHHHHHHHHH--hh-hhhhhh-hhHHHHHhhhhheecccCCCCc--HHHHHHHHHHHHHHHHHHHHHhhccc
Q 004796          398 LPIRFLSLIPWFIFTAFL--RR-SRMYGQ-AGGISAVIGAVLILGRKNFGPP--SEFAIARIVETFIGLSCSIMIDLLFQ  471 (730)
Q Consensus       398 ~~l~~l~L~~wi~~~~fl--~~-~~~Yg~-ag~ita~~~~iiil~~~~~~~p--~~~A~~Ri~ei~IGiviallV~~ll~  471 (730)
                      .+...+++++.+.+..++  .. ...|+. ..++|++   ++.+. ...++.  ...+..|+.+|++|++|+.++..++|
T Consensus       426 ~~~Llllllp~~llg~wv~~~~~R~sYa~~~ag~T~~---li~L~-~l~~p~~d~~~i~dRvl~tLLGi~iA~la~~lVw  501 (683)
T PRK11427        426 IVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFA---LATLE-NVFGPVYDLVEIRDRALGILIGTVVSAVIYTFVW  501 (683)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH---HHHhh-cccCcccchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            222222233322222222  21 124543 3445444   33322 112222  24567899999999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhhccC--CchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 004796          472 PTRASTLAKVQLSKSLATLHDCIGSMSLQS--SQASWLENQKRLKMQVTELAKFIGEAEVEPN  532 (730)
Q Consensus       472 P~ra~~~lr~~L~~~l~~l~~~~~~l~~~~--~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~  532 (730)
                      |.+.+..+++.+.+.++.+.+.++......  +....+..|+++...+++++.+......||+
T Consensus       502 P~~~~~~L~~~l~~aLr~la~~l~~~~~~~~~~~~~~~~~R~~l~~a~~~le~~~~rl~~Epq  564 (683)
T PRK11427        502 PESEARTLPQKLAGALGMLSKVLRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQ  564 (683)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            999999999999999998877766421100  0111234567788889999999999999995

>COG1289 Predicted membrane protein [Function unknown]

Probab=99.80  E-value=2.3e-16  Score=186.74  Aligned_cols=206  Identities=23%  Similarity=0.324  Sum_probs=152.4

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 004796          320 KVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAA-REATFKVANIKAQGTVLGTVYGVLGCFLFERFL  398 (730)
Q Consensus       320 ~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~-~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~  398 (730)
                      .++++.++||+|+++++.+++.+..+++.++|||+++|+++|++|+ +|++.+++.+|+.||++|.++|+++.++.....
T Consensus       349 ~~~~~alr~a~R~ala~~~~~~~~~~~~w~~g~w~llt~~vV~~~~~~~~t~~r~~~ri~GTllg~~~g~~~l~~~~p~~  428 (674)
T COG1289         349 RLNSPALRHALRTALALLLGYAFWLALGWPHGYWILLTAAVVCQPNAYGATRQRARQRILGTLLGLLLGLLVLLLLLPLI  428 (674)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            4788999999999999999999999999999999999999999999 999999999999999999999999988776644


Q ss_pred             HH-HHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcccCCcch
Q 004796          399 PI-RFLSLIPWFIFTAFLRRSRMYGQAG-GISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS  476 (730)
Q Consensus       399 ~l-~~l~L~~wi~~~~fl~~~~~Yg~ag-~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~  476 (730)
                      .. ..+.+++.++++.+++. .+|++++ +++..+...  ++ ....++..+...|+.|+.+|+++++++.+++||.+..
T Consensus       429 ~~~l~~l~~~~~l~~~~~~~-~~~~~a~~~i~l~v~~~--~~-l~~~~~~~~~~~r~~d~~iG~lIa~~~a~~v~~~~~~  504 (674)
T COG1289         429 PGLLLLLLLAALLFAAGIRL-AKYRLATLGITLLVLFL--VG-LLGSNGPDYDLPRFLDTLLGSLIALALAFLVWPLWRP  504 (674)
T ss_pred             hhHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHH--HH-HcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            42 22233333333333432 3355533 223221111  11 0123556899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 004796          477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPN  532 (730)
Q Consensus       477 ~~lr~~L~~~l~~l~~~~~~l~~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~  532 (730)
                      ..+++..++.++..++.+..+.+......  + ++...+....+......+..||.
T Consensus       505 ~~l~~~~~~~l~~~~~~l~~~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~~~p~  557 (674)
T COG1289         505 RRLRRALRRALRALRRDLASALSREPTGR--E-RRFEHNADDALSQLLNLMASEPA  557 (674)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCCccc--h-hhhhhccHHHHHHHHHHHhcCCc
Confidence            99999999999988888887743221111  2 33334444556666666666886

>PRK11427 multidrug efflux system protein MdtO; Provisional

Probab=99.74  E-value=2.7e-16  Score=181.87  Aligned_cols=223  Identities=17%  Similarity=0.067  Sum_probs=163.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 004796          324 KRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFL  403 (730)
Q Consensus       324 ~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l  403 (730)
                      .+.-.++|+.++++++++++..++.|+++|+..++++|+||+.|.|..|++.|++||++|+.+++++...+-++|.+..+
T Consensus        28 ~r~~~~~r~~~a~~L~l~i~~~l~~P~~a~a~~~vfivsqp~~g~t~~kai~r~vgt~lg~~~~vll~~~~v~~P~l~~l  107 (683)
T PRK11427         28 GRVPQTLQLWVGCLLVILISMTFEIPFLALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGYPLIRLI  107 (683)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHheeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence            34445599999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHH-----HHHHHHHHHHHhhcccCCcchHH
Q 004796          404 SLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVE-----TFIGLSCSIMIDLLFQPTRASTL  478 (730)
Q Consensus       404 ~L~~wi~~~~fl~~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~e-----i~IGiviallV~~ll~P~ra~~~  478 (730)
                      ++.+|++.|.|+.+....||++.+.+.+ +++.++..... +..-++.|..+     +.+|++|+++|+.++||.+.+..
T Consensus       108 ~ialw~~~~lyl~r~~rl~yvf~lag~t-aii~~~f~~v~-~~~E~~~R~~e~~w~~i~~gi~ca~lV~~l~~P~~~~~~  185 (683)
T PRK11427        108 IAGPILMGCMFLMRTHRLGLVFFAVAIV-AIYGQTFPAML-DYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPSRAINQ  185 (683)
T ss_pred             HHHHHHHHHHHHhhccchhHHHHHHHHH-HHHHhhccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhHhCcCChHHH
Confidence            9999999999987433334433333332 13312211222 22333899999     99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004796          479 AKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLL  557 (730)
Q Consensus       479 lr~~L~~~l~~l~~~~~~l~~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~~~~pf~~~~y~~ll~sl~Rl~dlL  557 (730)
                      ++.++.+.++...+++..   .  +++.++...+  +...++.+.+..++.|-.  ..+-+..++++.+.+..|+..+.
T Consensus       186 l~~~l~~~l~~a~~~l~~---~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  255 (683)
T PRK11427        186 MHQALNDRLDDAISHLTD---S--LAPLPETRIE--REALALQKLNVFCLADDA--NWRTQSAWWQSCVATVTYIYSTL  255 (683)
T ss_pred             HHHHHHHHHHHHHHHhcC---C--Ccchhhhhhh--hhHHHHHHHHHHHhhccC--CcHhhHHHHHHHHHHHHHHHHHh
Confidence            999999999844333332   1  2222222111  334456666667777754  22334455666666666666444

>COG4129 Predicted membrane protein [Function unknown]

Probab=99.71  E-value=4.8e-15  Score=160.06  Aligned_cols=199  Identities=20%  Similarity=0.278  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 004796          326 LVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSL  405 (730)
Q Consensus       326 l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l~L  405 (730)
                      ....+|+++|+++|++++.+++.|.|..|++++++.++|+...+++++++|+.|+++|+++|+++..+++.+|....+.+
T Consensus        10 g~RtlKt~ia~~La~~ia~~l~~~~~~~A~i~AV~~l~~t~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g~~~~~~~v~~   89 (332)
T COG4129          10 GARTLKTGLAAGLALLIAHLLGLPQPAFAGISAVLCLSPTIKRSLKRALQRLLGNALGAILAVLFFLLFGQNPIAFGVVL   89 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999888777777


Q ss_pred             HHHHHHHHHHhhhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcccCCcchHHHHHHHHH
Q 004796          406 IPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSK  485 (730)
Q Consensus       406 ~~wi~~~~fl~~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~~~lr~~L~~  485 (730)
                      ++.+.+|..++...  |. ...++.+..+ ++.  ..+++ .+...|+.++++|+++|++|+.++.|..  ..++..-.+
T Consensus        90 ~i~i~~~~~~~~~~--g~-~~~~~~~~~i-i~~--~~~~~-~~~~~r~l~~~vG~~~a~lvn~~~~~~~--~~~~~~~~k  160 (332)
T COG4129          90 LIIIPLLVLLKLEN--GV-VPITVGVLHI-LVA--AMIPL-FLIFNRFLLVFVGVGVAFLVNLVMPPPD--YELKLYRAK  160 (332)
T ss_pred             HHHHHHHHHHhccc--ch-hHHHHHHHHH-HHH--cccch-hHHHHHHHHHHHHHHHHHHHhhhcCCch--HHHHHHHHH
Confidence            66666666664221  11 1112221111 122  22322 3344499999999999999999999987  333333333


Q ss_pred             HHHHHHHHHHhhh---ccCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 004796          486 SLATLHDCIGSMS---LQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNF  533 (730)
Q Consensus       486 ~l~~l~~~~~~l~---~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~  533 (730)
                      ....+++.+....   ...+.+..+.....+.+.+.++.++..-.+.|.++
T Consensus       161 v~~~~~~il~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~e~~~  211 (332)
T COG4129         161 VEAILASILWEVASYLRDTESAELDKDLEALLRLLIKLAKLIAYRREENHF  211 (332)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccchhHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            3333334333321   11222333444555666677777777777777664

>KOG4711 consensus Predicted membrane protein [General function prediction only]

Probab=99.68  E-value=1.4e-16  Score=182.45  Aligned_cols=314  Identities=18%  Similarity=0.158  Sum_probs=215.4

Q ss_pred             cchhhh-hhhcccc-ccchhHHHHHHHHHHHHHHHHHHHhcCC-----CCcchhHHHHHHhhcCChhHHHHHHHHHHHHH
Q 004796          308 FSFKEV-WSNWSMK-VKSKRLVPAFKCSLSLGLAVLFGLLYSK-----PNGIWSGLPVAISFAAAREATFKVANIKAQGT  380 (730)
Q Consensus       308 ~~~k~~-~~~w~~~-~~~~~l~~AlK~alA~~La~~la~~~~l-----~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGT  380 (730)
                      .++++. +..|... -++++..|++|+++|..|...+-+.-..     .++.|+.+|+++|+..+.|+|+.++++|.+||
T Consensus        73 ~kv~~~~~~~~~~g~~dprrviha~KvglaltL~S~~y~~~~~~~~ig~~~~wai~tvvvv~e~svgatl~kglnr~v~t  152 (625)
T KOG4711|consen   73 AKVSKIARNLWEVGKEDPRRVIHAFKVGLALTLVSFLYFMKPLYKGIGVNALWAILTVVVVFEFSVGATLSKGLNRAVGT  152 (625)
T ss_pred             HHHHHHHhhhhhcCCCChhhhhhhhhccchhhhhhheeeccccccccchhhhheeeEEEEEEEeccchHHHHhHHHHHHH
Confidence            334433 5678877 7888999999999999998877543221     35789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh---c-chhH-HHHHHHHHHHHHHHHHh---hhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHH
Q 004796          381 VLGTVYGVLGCFLF---E-RFLP-IRFLSLIPWFIFTAFLR---RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIAR  452 (730)
Q Consensus       381 vlGav~g~l~~~l~---~-~~~~-l~~l~L~~wi~~~~fl~---~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~R  452 (730)
                      +.++.+|+.+-.+.   + .++. .+...++.-.....|++   ..+.|-|...|...+.+++.+.+...+.+.+.|..|
T Consensus       153 L~ag~l~l~~~~la~~~g~~~~~i~~~~~vF~~~~~~ty~~f~p~iK~y~y~~lIf~ltf~l~~vs~~r~~~~~~~a~~R  232 (625)
T KOG4711|consen  153 LSAGGLALGIERLAEISGKDNESIFIGITVFIAGAKATYSLFFPYIKAYEYGFLIFILTFCLVEVSGYRSDYFLELALQR  232 (625)
T ss_pred             hhhhhhhhhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhchhhhccchhhhHHHHHhhhheecccchhHHHHHHHHH
Confidence            99999999665433   3 2222 23333444334445555   223344434455555556666643445556999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHhhh---ccCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004796          453 IVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMS---LQSSQASWLENQKRLKMQVTELAKFIGEAEV  529 (730)
Q Consensus       453 i~ei~IGiviallV~~ll~P~ra~~~lr~~L~~~l~~l~~~~~~l~---~~~~~~~l~e~~~~l~~~L~~L~~ll~eA~~  529 (730)
                      +..+.+|..++++++.++||.||+..+++..++.+..++..++...   .+.+ ++.....+.   .+.........++.
T Consensus       233 l~~i~~g~~vcliis~f~~PiwAgedlh~l~~~n~~~~a~sleg~~~~~~~~~-~~y~~~~~i---~~~s~~~~~~s~~~  308 (625)
T KOG4711|consen  233 LLLIVIGGGVCLIISRFIFPIWAGEDLHKLDSKNFKNLASSLEGRKFTASCFN-GEYFCVEKI---EILSIPTFYKSAAW  308 (625)
T ss_pred             HHHHhhCcceeEEEEEEEeeccchhhhhhhhhhhhhhhhhhhcchhhhhhhhc-chheeehhh---hhcchhhhhhhcch
Confidence            9999999999999999999999999999999888887777666310   0111 111111100   00001111111122


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhchhhhhhhhHHHHHH-------HHHhhhhhccc
Q 004796          530 EPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLEL-------LKEKVGSSIKC  602 (730)
Q Consensus       530 Ep~~~~~pf~~~~y~~ll~sl~Rl~dlL~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~l~~  602 (730)
                      +|.     +  .+|+.++.+......+..++.|..  -++...++.+||+.|++ ++..+++       .|+|+-++++.
T Consensus       309 ~~~-----~--~Gy~svl~s~s~ee~l~~~A~Wep--~hG~~~~f~~Pw~~Yvk-~~~~~r~ca~~i~alh~~l~s~~qa  378 (625)
T KOG4711|consen  309 YPL-----Y--NGYWSVLQSKSQEERLANFAIWEP--PHGPYFTFRHPWKNYVK-LGGALRQCAFIIMALHGCLLSEIQA  378 (625)
T ss_pred             hhh-----h--cchhHHhhhhhHHHHHHHHheecC--CCCCceeeecchhHeee-hhhHHHHHHHHHHHhcccccccccC
Confidence            332     1  467777777766666666655554  44546678888888887 7777776       78999999999


Q ss_pred             hhhHhhhh--hHHHHHHHHhh--cccccchhcCCCCC
Q 004796          603 FEDVTTIK--SLATIEKELEK--NNISYDLELGKSKN  635 (730)
Q Consensus       603 ~~~~~~~~--~l~~l~~~~~~--~~~~~d~e~~~~~~  635 (730)
                      +.++.+++  .+.++..|+.+  +.....+|.+++.+
T Consensus       379 p~~~~~~~~~~l~rva~e~~kvl~~~~~~~~~~~~~s  415 (625)
T KOG4711|consen  379 PRDLRNKFRLTLRRVAIEISKVLRPFRAKVELMYKLS  415 (625)
T ss_pred             cHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Confidence            99998877  88899988888  66677788888874

>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate

Probab=99.65  E-value=1.5e-12  Score=153.47  Aligned_cols=450  Identities=16%  Similarity=0.142  Sum_probs=241.8

Q ss_pred             hhhHHHhhhhhHHHHHHhCCCccchhh-HHHHHHHHHHHhhccCCCchhHHHHHhhchheeeEE--EEecCCccccceec
Q 004796            3 LYATVQTVGPAILSLKLIGPARFTSTT-TALAVALAAYVVALPEGTHMKAKRIALGQIVITYVI--GFVNGERTEAVMHP   79 (730)
Q Consensus         3 l~~t~~~~~~~~~~l~~~~~~~~~~~~-~~~~va~~~f~v~~p~~t~~v~krial~~i~i~~v~--~~~~~~~t~~i~~p   79 (730)
                      +.||+.|++-+++...+.+++.+.... .++|+++.+|+..+-.  ++-.--+-|+.++.+.|+  .+.+|++  ....-
T Consensus        53 ~~GT~iGa~~~~~lv~~~~~~p~l~~~~lal~i~~c~~~~~~~~--~~~~y~~~lag~T~~iv~~~~~~~p~~--~f~~a  128 (650)
T PF04632_consen   53 LIGTLIGAAAGLLLVALFPQSPLLFLLALALWIGLCLYLSLLDR--NFRSYAFMLAGYTAAIVALPAVGNPEQ--VFDLA  128 (650)
T ss_pred             HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHhhcccCccH--HHHHH
Confidence            468999999999988887666655443 4467777776665443  233333445555544442  3334443  22222


Q ss_pred             hhHHHHHHHHHHHHHHHhhCCcchhhHHHHHHHHHHHHhhHHHHHHHHHHhhcccchhhHHHHHHHhhhhhhhHHHHHHH
Q 004796           80 LHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQN  159 (730)
Q Consensus        80 ~~v~~~~~lG~~~~vla~llP~P~lA~~~~~~~~~~~~~~~~~~l~~~v~~f~~~~~~~~~~~~s~~k~l~~a~~~~l~~  159 (730)
                      +.=...+++|++++.++-.+-+|+-+.+++++..++..+++.+.+.-..+.--.++.        ..+.+....    ..
T Consensus       129 ~~R~~ei~iGi~~a~~v~~l~~P~~~~~~l~~~l~~~l~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~----~~  196 (650)
T PF04632_consen  129 LWRVLEILIGILCATLVSMLFFPQRARRQLRRRLAQRLADLARWLAALLDGDPDPAA--------ERRRLARDI----AA  196 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch--------HHHHHHHHH----HH
Confidence            234478999999999998888899999999999999999888888766665544332        222222222    23


Q ss_pred             HHhhccccccccccccccccccCChhhhhhhccccchhHHHHHHhcccCCcccccchHHHHHHHhhHHHHHHHHhhhhcC
Q 004796          160 IKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCD  239 (730)
Q Consensus       160 i~~~~~~~~wE~~~~~~f~~~~~~~~~~~~~L~~~Lr~m~~al~~~~~~p~~i~d~e~~~~L~~~~~~i~~~l~~~~~~~  239 (730)
                      ++.......+|......-+.........+.++..-+++++..+.....-+. ....|+.+.+    +++...        
T Consensus       197 l~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~-~~~~~l~~~l----~~la~~--------  263 (650)
T PF04632_consen  197 LESLLSHARYESPRLRRRRRRLRALQARLLRLLALLRSLARRLAALPDAPD-AARLELAALL----EELAAA--------  263 (650)
T ss_pred             HHHHHhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch-hhHHHHHHHH----HHHhhc--------
Confidence            444444455553222200000000111111122222222222221111000 0000122222    222220        


Q ss_pred             CCCCcCcchHHHHHHHHhccCCCccc--cccchHHHHHHHHHhhhhhCCCCCCCcccccccccccCCCCCcchhhhhhhc
Q 004796          240 SLTVPESNAEDIMKFLQTLQNIPTTT--QELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNW  317 (730)
Q Consensus       240 ~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~fFlf~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~w  317 (730)
                        ...+........+.+.+.......  ....--.++..+....+++.....    +.......+..+...       ..
T Consensus       264 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~l~~~~~----~~~~l~~~~~~~~~~-------~~  330 (650)
T PF04632_consen  264 --AQRADLDQAAAALRQRIAALRPAASDDSDWQRALLARLADLLRDLIQALR----SLRALRRPIPARRPF-------RF  330 (650)
T ss_pred             --ccccccHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHhHHHHHH----HHHhhhccccccccc-------cc
Confidence              000111111111111111111111  111111333333333332221000    000000000000000       00


Q ss_pred             ccccc-chhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhh--cCChhHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 004796          318 SMKVK-SKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISF--AAAREATFKVANIKAQGTVLGTVYGVLGCF-L  393 (730)
Q Consensus       318 ~~~~~-~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~--qp~~G~T~~~~~~RilGTvlGav~g~l~~~-l  393 (730)
                      ..+.| ...++.|+|+++++.+++++-.+.+++.|.-+++++.+++  ..+.+........++.|+++|+++|+++.+ +
T Consensus       331 ~~~~d~~~A~~~alra~la~~~~~l~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~v  410 (650)
T PF04632_consen  331 PLHRDWPLALRNALRAFLAILIAGLFWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFV  410 (650)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            11122 3457899999999999999988889999999999988887  688888899999999999999999998876 3


Q ss_pred             hcch--hHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhhhheecccCCCCc-HHHHHHHHHHHHHHHHHHHHHhhcc
Q 004796          394 FERF--LPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPP-SEFAIARIVETFIGLSCSIMIDLLF  470 (730)
Q Consensus       394 ~~~~--~~l~~l~L~~wi~~~~fl~~~~~Yg~ag~ita~~~~iiil~~~~~~~p-~~~A~~Ri~ei~IGiviallV~~ll  470 (730)
                      .|+.  .+...+++++.+++..++.....|.+.|.-..+ ..++.+...+.... ......+..-+++|++++.++..++
T Consensus       411 lP~~~~f~~L~l~l~~~l~~~~~~~~~p~~~~~g~~~~v-~f~~~~~~~n~~~~d~~~f~n~~la~l~G~~~a~l~~~li  489 (650)
T PF04632_consen  411 LPHLDGFPLLALVLAPFLFLGGLLMARPRTAYIGLGFAV-FFLLLLGPGNPYSYDFATFLNRALAILLGIVIAALVFRLI  489 (650)
T ss_pred             hhccCcHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3442  233445555555555565544445443221111 11222221121111 2678889999999999999999999


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHHHH
Q 004796          471 QPTRASTLAKVQLSKSLATLHDCIG  495 (730)
Q Consensus       471 ~P~ra~~~lr~~L~~~l~~l~~~~~  495 (730)
                      ||.++....|+.+....+.+.+...
T Consensus       490 ~p~~~~~~~rrl~~~~~~~l~~~~~  514 (650)
T PF04632_consen  490 RPFSPEWRRRRLLRALRRDLARLAR  514 (650)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhh
Confidence            9999999898888888885555443

It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane

>COG1289 Predicted membrane protein [Function unknown]

Probab=99.57  E-value=9.1e-13  Score=156.30  Aligned_cols=165  Identities=21%  Similarity=0.270  Sum_probs=135.2

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Q 004796          320 KVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLP  399 (730)
Q Consensus       320 ~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~  399 (730)
                      .+.+..+++++|+.+|+.++++++++++.++++|+++|+++|++|+.|+.+.+++.|++||++|..+++++..++.+.|.
T Consensus         5 ~~~~~~~~~~lr~~~a~~la~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~rli~tlig~~~~~~~~~~~~~~p~   84 (674)
T COG1289           5 RPTNADWRYALRTFLAACLALALAFLLGLPQPSWAVSTVAIVSAPDSGAVLSKGLKRLIGTLIGFAVALLLVALLAQEPW   84 (674)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHhCcCCCCHHHhhHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence            36778899999999999999999999999999999999999999999999999999999999999999999988888888


Q ss_pred             HHHHHHHHHHHHHHHHh----hhhhhhh-hhHHHHHhhhhheecccCCCCcH---HHHHHHHHHHHHHHHHHHHHhhccc
Q 004796          400 IRFLSLIPWFIFTAFLR----RSRMYGQ-AGGISAVIGAVLILGRKNFGPPS---EFAIARIVETFIGLSCSIMIDLLFQ  471 (730)
Q Consensus       400 l~~l~L~~wi~~~~fl~----~~~~Yg~-ag~ita~~~~iiil~~~~~~~p~---~~A~~Ri~ei~IGiviallV~~ll~  471 (730)
                      +..+++..|+++|+...    +...|+. .++||+.   ++. ......+|.   +.+++|..++.+|+.|+-.+....+
T Consensus        85 ~f~~~~~~~~~l~~~~~~~~~~~~~~a~~la~yT~~---~~~-~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~  160 (674)
T COG1289          85 LFLLLLTLWLGLCTAIGSLYRTIASYAFVLAGYTAL---IIG-PAPAIPEPELLFDGAVWRVVEILLGILCAPVVPLLES  160 (674)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH---Hhc-cccccccHHHHHHHHHHHHHHHHHHHHHhccchHhhh
Confidence            87888899999997655    2333332 3445554   333 211334452   8899999999999999999999999


Q ss_pred             CCcchHHHHHHHHHHHH
Q 004796          472 PTRASTLAKVQLSKSLA  488 (730)
Q Consensus       472 P~ra~~~lr~~L~~~l~  488 (730)
                      |.+....+.+.+....+
T Consensus       161 ~~~~~~~L~~~l~~~~~  177 (674)
T COG1289         161 PSRLYQALANYLEAKSR  177 (674)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            98876666665555444

>PF13515 FUSC_2: Fusaric acid resistance protein-like

Probab=99.56  E-value=4.5e-14  Score=131.87  Aligned_cols=124  Identities=25%  Similarity=0.420  Sum_probs=91.3

Q ss_pred             HHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh
Q 004796          338 LAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRR  417 (730)
Q Consensus       338 La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l~L~~wi~~~~fl~~  417 (730)
                      +|.+++.+++.+|++|+++|++++++|+.+++.+++.+|++||++|+++|+++..+++++ ....+.++.+.+...+++ 
T Consensus         1 ~a~~i~~~~~~~~~~W~~it~~~v~~~~~~~~~~~~~~Ri~Gt~iG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-   78 (128)
T PF13515_consen    1 LAFFIAQWLGLPHGYWAPITVVSVLSPSYGATVNRAIQRILGTLIGVVLGLLLLYLFPGN-YVLILIVFLLMFLIFYFL-   78 (128)
T ss_pred             ChhhHHHHHcCCchHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHH-
Confidence            356788889999999999999999999999999999999999999999999999888885 333333444443344444 


Q ss_pred             hhhhhhh-hHHHHHhhhhheeccc---CCCCcHHHHHHHHHHHHHHHHHHHHH
Q 004796          418 SRMYGQA-GGISAVIGAVLILGRK---NFGPPSEFAIARIVETFIGLSCSIMI  466 (730)
Q Consensus       418 ~~~Yg~a-g~ita~~~~iiil~~~---~~~~p~~~A~~Ri~ei~IGiviallV  466 (730)
                      .+.|+.. +.+|..   ++++...   ..+++.+.+..|+.++++|+++++++
T Consensus        79 ~~~y~~~~~~~t~~---~v~~~~~~~~~~~~~~~~~~~R~~~v~iG~~i~~~v  128 (128)
T PF13515_consen   79 SKNYAIAQIFITVM---VVLLFSLIHPGNGDPWQLALERILDVLIGILIALLV  128 (128)
T ss_pred             hccHHHHHHHHHHH---HHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence            3455442 333332   2222211   13455689999999999999999874

>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function

Probab=99.56  E-value=7.4e-14  Score=134.15  Aligned_cols=137  Identities=18%  Similarity=0.237  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 004796          327 VPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLI  406 (730)
Q Consensus       327 ~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l~L~  406 (730)
                      ...+|+++|+.++++++.+++.++|++|++++++.+||+...|++.+++|+.|+++|+++|+++..+++.+|....+.++
T Consensus         5 ~r~iKtaiA~~la~~ia~~l~~~~~~~A~i~Ail~~q~T~~~S~~~~~~Ri~~~~iG~~~a~~~~~~~g~~~~~~~l~v~   84 (141)
T PF06081_consen    5 MRTIKTAIAAFLAILIAQLLGLQYPFFAPIAAILSMQPTVYRSLKQGLNRILGTLIGALLALLFFLILGYNPLSIGLAVI   84 (141)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHhheeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999999998888776666666


Q ss_pred             HHHHHHHHHhhhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004796          407 PWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLF  470 (730)
Q Consensus       407 ~wi~~~~fl~~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll  470 (730)
                      ..+..|..++....-. .+.++    .+.++.  ..+.+..++..|+.++++|++++++||+++
T Consensus        85 i~i~~~~~l~~~~~~~-~a~v~----~~~i~~--~~~~~~~~~~~r~l~t~iG~~va~lVN~~~  141 (141)
T PF06081_consen   85 ITIPICNWLKLGEGII-VAAVT----FVHILL--SGSDSFSYALNRVLLTLIGIGVALLVNLLM  141 (141)
T ss_pred             HHHHHHHHhCCCCeeh-HHHHH----HHHHHH--cCCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            6666666666432111 11121    122233  233334559999999999999999999864

>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi

Probab=99.03  E-value=1.1e-06  Score=100.27  Aligned_cols=246  Identities=13%  Similarity=0.145  Sum_probs=160.1

Q ss_pred             hhcc-ccccchhHHHHHHHHHHHHHHHHHH------HhcCCCCcchhHHHHHHhhc-CChhHHHHHHHHHHHHHHHHHHH
Q 004796          315 SNWS-MKVKSKRLVPAFKCSLSLGLAVLFG------LLYSKPNGIWSGLPVAISFA-AAREATFKVANIKAQGTVLGTVY  386 (730)
Q Consensus       315 ~~w~-~~~~~~~l~~AlK~alA~~La~~la------~~~~l~~g~WA~lTv~iV~q-p~~G~T~~~~~~RilGTvlGav~  386 (730)
                      ..|. .+++.+.++.-+|++++..+++.+.      .+++ ..+|.+++..+++.- -.+|..+...+.=++|+.+|..+
T Consensus         4 p~W~~~~ld~~~~k~~~k~~i~~~i~~~l~~i~~~~~~~g-~~~yl~~i~~~~~~p~~~~~~~~~~~~~~~~g~~~g~~~   82 (459)
T PF10337_consen    4 PAWLLDHLDRRSLKIMFKCWIAPWIALILCQIPPVARWLG-TAGYLAPIISVIVPPGRPRGKFLEAMILLLLGVCLGWAW   82 (459)
T ss_pred             chhhhcCCCHHHHHHHHHHHHHHHHHHHHHhchHHHHHhc-chhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            4576 4589999999999999999998874      3444 678888875544432 24678888899999999999988


Q ss_pred             HHHHHHHhcc------------------------hhH------------H---HHHHHHHHHHHHH----HHhhh-hhhh
Q 004796          387 GVLGCFLFER------------------------FLP------------I---RFLSLIPWFIFTA----FLRRS-RMYG  422 (730)
Q Consensus       387 g~l~~~l~~~------------------------~~~------------l---~~l~L~~wi~~~~----fl~~~-~~Yg  422 (730)
                      |++..++...                        .+.            +   ..++.++|+++..    ++|.. ..|-
T Consensus        83 ~~l~~~~a~~aR~~~t~a~l~~~~~~~~~~~s~~~~~~~~~~~i~~G~~~~a~~saV~av~l~~~i~~~~~lRa~~p~~~  162 (459)
T PF10337_consen   83 GLLAMYIAVAARPHDTQARLQQLQQSAGACTSGPNPAACAQQLIFDGFFYDARASAVFAVFLFVFIYFHGWLRAKNPKLN  162 (459)
T ss_pred             HHHHHHHHHHHccCccHHHHHHHHHHhccccCCCChhHHHHHhhcccceecchHHHHHHHHHHHHHHHHHHHHHhCcchH
Confidence            8877764421                        111            0   0123344554443    44421 1121


Q ss_pred             hhhHHHHHhhhhheec--ccCCC-CcHHHHHHHHHHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHhhh-
Q 004796          423 QAGGISAVIGAVLILG--RKNFG-PPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMS-  498 (730)
Q Consensus       423 ~ag~ita~~~~iiil~--~~~~~-~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~~~lr~~L~~~l~~l~~~~~~l~-  498 (730)
                      . +.+...+...+.+.  +.... .+..++..=+.-..+|+++++++++++||.+.+..+.+.+.+.++.+.+.+..-. 
T Consensus       163 ~-~~I~~~I~~~i~~t~g~~~p~~~~~~l~~~ll~P~~ig~ai~~~vslliFP~sss~~~~~~~~~~l~~l~~~l~~~~~  241 (459)
T PF10337_consen  163 F-PVIFGSIFVDIFLTYGPLFPTFFAYTLGKTLLKPFLIGIAIALVVSLLIFPESSSHVVLKSMEDYLRLLKKALDAQRN  241 (459)
T ss_pred             H-HHHHHHHHHHHHHHhCcCcCcchHHHHHHHHHHHHHHHHHHHHHHheeecCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1 22222211111111  11111 2335555556677899999999999999999999999999988888877666431 


Q ss_pred             ---ccC-C---c----hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 004796          499 ---LQS-S---Q----ASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAAHSV  564 (730)
Q Consensus       499 ---~~~-~---~----~~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~~~~pf~~~~y~~ll~sl~Rl~dlL~~~~~a~  564 (730)
                         ... +   .    ..+++...++...+..++.-+.++..|-.  .++++.+.++.+...++++.--+..+....
T Consensus       242 ~l~~~~~~~~~~~~~~~~L~~~~~~l~~~~~~l~~~l~~~~~Eis--~grl~~~Dl~~i~~~lr~l~~~~~gL~~~~  316 (459)
T PF10337_consen  242 FLQSSEPSDEFDAKSLKKLKATKAKLRALYAKLQAALRFLKLEIS--YGRLSPDDLKPIFSLLRSLMIPLSGLSSFC  316 (459)
T ss_pred             HHhCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHe--eecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               111 1   1    33445567788888889999999999987  567888888888887777766555554433

Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.

>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional

Probab=98.83  E-value=6.7e-05  Score=88.51  Aligned_cols=428  Identities=13%  Similarity=0.115  Sum_probs=203.7

Q ss_pred             hhhHHHhhhhhHHHHHHhCCCccchhh-HHHHHHHHHHHhhccCCCchhHHHHHhhchheeeEE--EEecCCccccceec
Q 004796            3 LYATVQTVGPAILSLKLIGPARFTSTT-TALAVALAAYVVALPEGTHMKAKRIALGQIVITYVI--GFVNGERTEAVMHP   79 (730)
Q Consensus         3 l~~t~~~~~~~~~~l~~~~~~~~~~~~-~~~~va~~~f~v~~p~~t~~v~krial~~i~i~~v~--~~~~~~~t~~i~~p   79 (730)
                      +.||+.|..-+++..++.++..+.... .++|+++..++-.+-.  ++.+-.+-|+..+.+.|+  ..-|++.   ++ .
T Consensus        69 i~GTliGa~~~l~l~~~f~~~p~l~~l~l~lWig~c~~~s~l~r--~~~sY~~~LaGyTa~iI~~~~~~~p~~---~f-~  142 (652)
T PRK10631         69 IIGTFIGCIAALVIIIATIRAPLLMILLCCIWAGFCTWISSLVR--VENSYAWGLAGYTALIIVITIQPEPLL---TP-Q  142 (652)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHhccCCchH---HH-H
Confidence            358999999998888887655544332 3355555555444433  334555666666665553  2223322   21 1


Q ss_pred             hhHH--HHHHHHHHHHHHHhhCCcchhhHHHHHHHHHHHHhhHHHHHHHHHHhhcccchhhHHHHHHHhhhhhhhHHHHH
Q 004796           80 LHVA--ASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFI  157 (730)
Q Consensus        80 ~~v~--~~~~lG~~~~vla~llP~P~lA~~~~~~~~~~~~~~~~~~l~~~v~~f~~~~~~~~~~~~s~~k~l~~a~~~~l  157 (730)
                      .-+.  .-+++|++++.++..+-+|+-+...+.+..++...++...+......   .+..+.  -..+.+.+.+..    
T Consensus       143 ~A~~R~~Ei~iGi~ca~lv~~l~~P~~~~~~l~~~l~~~~~~~~~~~~~~l~~---~~~~~~--~~~~~~L~~di~----  213 (652)
T PRK10631        143 FAVERCSEIVIGIVCAILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKH---GDKEEV--DKAWGDLVRRTT----  213 (652)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHhcc---Cccchh--hHHHHHHHHHHH----
Confidence            2222  67899999999998888899999999999999888877666533221   221111  123333334333    


Q ss_pred             HHHHhhccccccccccccccccccCChhhhhhhcc-----ccchhHHHHHHhcccCCcccccchHHHHHHHhhHHHHHHH
Q 004796          158 QNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLE-----IPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTI  232 (730)
Q Consensus       158 ~~i~~~~~~~~wE~~~~~~f~~~~~~~~~~~~~L~-----~~Lr~m~~al~~~~~~p~~i~d~e~~~~L~~~~~~i~~~l  232 (730)
                       .++.......||-...+       ...+.+..|.     +-.++++.-+..... |-.+ .+++...+..    ..   
T Consensus       214 -~le~lr~~~~~e~~~~r-------~~~~~l~~L~~~~l~l~~~al~~~l~~~~~-~~~~-~~~l~~ll~~----~~---  276 (652)
T PRK10631        214 -ALNGMRSNLMMESSRWQ-------RANRRLKALNTLSLTLITQACETYLIQNTR-PELI-TDTFRELFDT----PV---  276 (652)
T ss_pred             -HHHHHHHhhccCCcchh-------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Cccc-hHHHHHHHhc----cc---
Confidence             44445555566633322       1222222221     111111111111110 1111 1112212210    00   


Q ss_pred             HhhhhcCCCCCcCcchHHHHHHHHhccCCC--ccccccchH--HHH--HHHHHhhhhhCCCCCCCcccccccccccCCCC
Q 004796          233 KQAQSCDSLTVPESNAEDIMKFLQTLQNIP--TTTQELSSY--FFL--FCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSN  306 (730)
Q Consensus       233 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~~~~~~~--fFl--f~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (730)
                               .+..+..+....+...++...  ....++..+  -..  +++..+..+...-.     +...   .....+
T Consensus       277 ---------~~~~~~~~~l~~lr~~~~~~~~~~~~~~l~~~~~~~~r~~~L~~~~~~~~~~~-----~~~~---~~~~~~  339 (652)
T PRK10631        277 ---------ETPQDVHKQLKRLRRVIAWTGERETPVTIYSWVGAATRYLLLKKGVISNTKIS-----ATEE---EILQGE  339 (652)
T ss_pred             ---------cchhhHHHHHHHHHHHhhhccccccccchhHHHHHHHHHHHHHHHHhhhhhhh-----hhhh---hhcccc
Confidence                     000000001111111111100  000111100  011  11111221110000     0000   000000


Q ss_pred             CcchhhhhhhccccccchhHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhc--CChhHHHHHHHHHHHHHHHHH
Q 004796          307 GFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFA--AAREATFKVANIKAQGTVLGT  384 (730)
Q Consensus       307 ~~~~k~~~~~w~~~~~~~~l~~AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~q--p~~G~T~~~~~~RilGTvlGa  384 (730)
                      ... +   ..|.  ...+....++|++++++++..+=.+-+++.|.-+++.+.+++-  .....-...+.+=+.||++|.
T Consensus       340 ~~~-~---~~~~--~~h~A~~~glRa~~ai~~~~~fWI~TgW~~Ga~a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~  413 (652)
T PRK10631        340 PVV-K---VESA--ERHHAMINGWRTTLATALGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAAL  413 (652)
T ss_pred             ccc-c---cccc--hHHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH
Confidence            000 0   0010  1123577788999888888888777789999888776666543  222223334555567777777


Q ss_pred             HHHHHHHHH-hcc---hhHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhhhheecccCCCCc-HHHHHHHHHHHHHH
Q 004796          385 VYGVLGCFL-FER---FLPIRFLSLIPWFIFTAFLRRSRMYGQAGGISAVIGAVLILGRKNFGPP-SEFAIARIVETFIG  459 (730)
Q Consensus       385 v~g~l~~~l-~~~---~~~l~~l~L~~wi~~~~fl~~~~~Yg~ag~ita~~~~iiil~~~~~~~p-~~~A~~Ri~ei~IG  459 (730)
                      ++|++..+. .|+   ..+...+++.+.++++..+...+.+|-.|..   +..+.+++..+.... ....+..-+..++|
T Consensus       414 ~~a~l~~f~vLP~i~~~f~lL~laLap~~~~~g~~~~~~~~~~lg~~---i~f~~~l~l~n~~~~d~~~FlN~alA~v~G  490 (652)
T PRK10631        414 PLGALYFMVIIPNTQQSMLLLCISLGVLGFFIGIEVQKRRLGSLGAL---ASTINILVLDNPMTFHFSQFLDSALGQIVG  490 (652)
T ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhcccHHHHHHHH---HHHHHHhccCCCCCcCHHHHHHHHHHHHHH
Confidence            777666543 333   2334445555554444444444445422221   111222221122111 25667778888999


Q ss_pred             HHHHHHHhhcccCCcchHHHHHHHHHHHH
Q 004796          460 LSCSIMIDLLFQPTRASTLAKVQLSKSLA  488 (730)
Q Consensus       460 iviallV~~ll~P~ra~~~lr~~L~~~l~  488 (730)
                      ++++.++..++.|.......|+-+.....
T Consensus       491 i~~A~l~f~lirp~~~~r~~rrL~~~~~~  519 (652)
T PRK10631        491 CFLALIVILLVRDNSRDRTGRVLLNQFVS  519 (652)
T ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence            99999999999998766666554444443

>PF12805 FUSC-like: FUSC-like inner membrane protein yccS

Probab=98.57  E-value=1.2e-05  Score=86.07  Aligned_cols=176  Identities=16%  Similarity=0.103  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh-hhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHH
Q 004796          378 QGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRR-SRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVET  456 (730)
Q Consensus       378 lGTvlGav~g~l~~~l~~~~~~l~~l~L~~wi~~~~fl~~-~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei  456 (730)
                      +.|++|..++.+++.+...+|++..+.++++.++++++.. ...|+..|..+.+ .+++.+.  ...+ ...++.+..-+
T Consensus         3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~~G~r~~~i~~~~Ll-~~v~t~~--~~~~-~~~~~~~~~l~   78 (284)
T PF12805_consen    3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGVYGPRAATIGFATLL-VAVYTMA--GPSP-GPEALEHALLF   78 (284)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHh--CCCc-chHHHHHHHHH
Confidence            3455555344444444455566666667777766666642 1222222322222 1111122  1221 23788899999


Q ss_pred             HHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHhhhccC------Cchh----HHHHHHHHHHHHHHHHHHHHH
Q 004796          457 FIGLSCSIMIDLLFQPTRASTLAKVQLSKSLATLHDCIGSMSLQS------SQAS----WLENQKRLKMQVTELAKFIGE  526 (730)
Q Consensus       457 ~IGiviallV~~ll~P~ra~~~lr~~L~~~l~~l~~~~~~l~~~~------~~~~----l~e~~~~l~~~L~~L~~ll~e  526 (730)
                      ++|.++++++++++||.++.+..|+.+++++..++++++.-....      +.+.    +...+.++...++..+..+..
T Consensus        79 ~~Gglwy~~lsl~~~~l~p~r~~rqaLa~~y~~lA~yl~~ka~~~~p~~~~~~~~~~~~l~~~q~~v~~~~~~~R~~l~~  158 (284)
T PF12805_consen   79 LAGGLWYLLLSLLWWPLRPYRPVRQALAECYRALADYLRAKARFFDPDQHDDDEQLRIELAQQQIKVNEALEQARELLLR  158 (284)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988742211      1111    122345566666667776654


Q ss_pred             hhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 004796          527 AEVEPNFWFFPFHIACYSKLLGTLTKMVDLLLFAA  561 (730)
Q Consensus       527 A~~Ep~~~~~pf~~~~y~~ll~sl~Rl~dlL~~~~  561 (730)
                      .+. ++   ...+....++++..+-.+.|+.+.+.
T Consensus       159 ~r~-~~---~~~~~~~~~~ll~~~~~a~Dl~E~~~  189 (284)
T PF12805_consen  159 RRR-SG---RGKPSTYGRRLLLLFFEAVDLFERAL  189 (284)
T ss_pred             hhc-cc---CCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            432 21   11122333455555555555554443

>PF10334 DUF2421: Protein of unknown function (DUF2421); InterPro: IPR018820 This domain is found in several uncharacterised proteins and in Brefeldin A-sensitivity protein 4, which is a zinc finger protein containing five transmembrane domains

Probab=98.36  E-value=3.1e-05  Score=80.51  Aligned_cols=96  Identities=21%  Similarity=0.245  Sum_probs=79.3

Q ss_pred             cCCcchHHHHHHHHHHHHHHHHHHHhhhccCC------ch-------hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 004796          471 QPTRASTLAKVQLSKSLATLHDCIGSMSLQSS------QA-------SWLENQKRLKMQVTELAKFIGEAEVEPNFWFFP  537 (730)
Q Consensus       471 ~P~ra~~~lr~~L~~~l~~l~~~~~~l~~~~~------~~-------~l~e~~~~l~~~L~~L~~ll~eA~~Ep~~~~~p  537 (730)
                      +|.+++..+|+.+++++..+++.+..+...+.      +.       ..++...++...|..++.+++.++.||++ .+|
T Consensus         2 ~P~Sar~~vRk~La~~l~~l~~~Y~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~l~~~k~Ep~l-~G~   80 (229)
T PF10334_consen    2 RPPSARRHVRKTLASTLSELGDLYSLVVSFWSRRLDNPDGHIDAEEDAIRKRFLKLQQSLNSLRTLLAFAKFEPSL-KGR   80 (229)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCC-CCC
Confidence            69999999999999999999999887743211      00       12234567788899999999999999995 999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 004796          538 FHIACYSKLLGTLTKMVDLLLFAAHSVGFL  567 (730)
Q Consensus       538 f~~~~y~~ll~sl~Rl~dlL~~~~~a~~~l  567 (730)
                      ||...|++++..+++|.+.+..+..+...+
T Consensus        81 FP~~~Y~~l~~~~~~il~~l~~l~~~~~~l  110 (229)
T PF10334_consen   81 FPKETYQRLLELCQNILDLLSLLSYVSTRL  110 (229)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999998887776554

Brefeldin A-sensitivity protein 4 null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport [, , ].

>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family

Probab=98.34  E-value=0.00013  Score=87.22  Aligned_cols=170  Identities=13%  Similarity=-0.039  Sum_probs=103.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCCCC-cchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 004796          322 KSKRLVPAFKCSLSLGLAVLFGLLYSKPN-GIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPI  400 (730)
Q Consensus       322 ~~~~l~~AlK~alA~~La~~la~~~~l~~-g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l  400 (730)
                      .+..+.+++|+.+|+..+.++.++++... +.=+.+.++...-.+..+.++.-+.+++-|++...++.+.+.+...+|++
T Consensus         4 ~~~~~~~~l~v~ia~~~~~~~~~~~g~~~~~i~l~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~   83 (701)
T TIGR01667         4 LNQKLVYCLPVFIALMGAELRIWWFGLLFLLIPLCLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWL   83 (701)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence            45678899999999999888888876443 33333444444445666777666666666666555555555554555665


Q ss_pred             HHHHHHHHHHHHHHHh-hhhhhhhhh--HHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcccCCcchH
Q 004796          401 RFLSLIPWFIFTAFLR-RSRMYGQAG--GISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAST  477 (730)
Q Consensus       401 ~~l~L~~wi~~~~fl~-~~~~Yg~ag--~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~~  477 (730)
                      ..+.+++..++.+.+. .+..|+..+  +..+.++++  ++   .+.+ ...+.--.-+++|.+++.+++++.++-++.+
T Consensus        84 ~~~~l~~~tf~~~mlga~G~r~~~I~f~~L~~aiytm--l~---~~~~-~~w~~~pllll~GalwY~l~sll~~~l~p~r  157 (701)
T TIGR01667        84 FPFLLTLLTFGFILLGALGQRYATIAFASLLAAIYTM--LG---AGEV-PVWFIEPLLILAGTLWYGLLTLIWFLLFPNQ  157 (701)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHH--cC---cccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            4444433332222222 233344221  121121211  22   1211 1223355567889999999999888888778


Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q 004796          478 LAKVQLSKSLATLHDCIGSM  497 (730)
Q Consensus       478 ~lr~~L~~~l~~l~~~~~~l  497 (730)
                      .+++.+++++..++++++.-
T Consensus       158 p~q~~La~~y~~La~yL~aK  177 (701)
T TIGR01667       158 PLQESLSRLYRELAEYLEAK  177 (701)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999987764

TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane

>TIGR01666 YCCS hypothetical membrane protein, TIGR01666

Probab=98.24  E-value=0.00054  Score=81.96  Aligned_cols=172  Identities=10%  Similarity=-0.003  Sum_probs=114.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCCCC-cchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 004796          322 KSKRLVPAFKCSLSLGLAVLFGLLYSKPN-GIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPI  400 (730)
Q Consensus       322 ~~~~l~~AlK~alA~~La~~la~~~~l~~-g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l  400 (730)
                      .+..+.+++|+.+|+..+..++++++..+ +.=..+.++...-.+..+.++.-+.+++-|+++..++.+.+.+...+|++
T Consensus         4 ~~~~~~~~lri~ia~~~~~~~~~~~~~~~~~~~l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~l   83 (704)
T TIGR01666         4 LNAKVIYTIPIFIALNGAAVGIWFFDISSQSMPLILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWL   83 (704)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence            45678899999999999988888876433 33334445555556777778777888888888877777777666666766


Q ss_pred             HHHHHHHHHHHHHHHh-hhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcccCCcchHHH
Q 004796          401 RFLSLIPWFIFTAFLR-RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLA  479 (730)
Q Consensus       401 ~~l~L~~wi~~~~fl~-~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~ll~P~ra~~~l  479 (730)
                      ..+.+++..+..+.+. ....|+..|.-+.+++..-+++   .+.+ ...+..-.-.++|.+++.+++++.|+-++.+.+
T Consensus        84 f~~~l~~~tf~~~mlga~G~Rya~Iaf~tLliaiytmlg---~~~~-~~w~~~pllll~GalwY~llsl~~~~l~p~rp~  159 (704)
T TIGR01666        84 FAVGLTVSTFGFIMLGAVGQRYATIAFGSLLVALYTMLG---YIEV-NVWFIQPVMLLCGTLWYSVVTLIVHLFFPNRPV  159 (704)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc---cccc-chHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence            5554444333333332 2223544333333322122222   1222 223447788899999999999999888888889


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 004796          480 KVQLSKSLATLHDCIGSM  497 (730)
Q Consensus       480 r~~L~~~l~~l~~~~~~l  497 (730)
                      ++.+++++..++++++.-
T Consensus       160 q~~LA~~y~~La~yL~ak  177 (704)
T TIGR01666       160 QENLAKAFCQLAEYLETK  177 (704)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999988764

This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.

>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana []

Probab=98.18  E-value=2.3e-05  Score=87.65  Aligned_cols=189  Identities=15%  Similarity=0.149  Sum_probs=118.9

Q ss_pred             hhHHHhhhhhHHHHHHh---CCCccchh-hHHHHHHHHHHHhhccCCCchhHHHHH------hhchheeeEEEEecCCcc
Q 004796            4 YATVQTVGPAILSLKLI---GPARFTST-TTALAVALAAYVVALPEGTHMKAKRIA------LGQIVITYVIGFVNGERT   73 (730)
Q Consensus         4 ~~t~~~~~~~~~~l~~~---~~~~~~~~-~~~~~va~~~f~v~~p~~t~~v~kria------l~~i~i~~v~~~~~~~~t   73 (730)
                      .||+.+-+.++...|+.   |+ . +-. ...+.+++-+|+..+..+.|.+.+|+.      +..+.++-|.+|..++  
T Consensus        68 lGTl~aG~La~~~~~la~~~g~-~-~~~~~i~~~vFi~~~~atf~r~~P~~k~rydYg~~Vf~LTf~lV~vs~yr~~~--  143 (406)
T PF11744_consen   68 LGTLLAGILAFGVSWLASLSGD-P-GEPIVIGISVFIIGFIATFVRFIPKIKARYDYGGLVFILTFCLVAVSGYRTDE--  143 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCc-c-chhHHHHHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHhheeecCCcch--
Confidence            57888888888888874   22 1 111 233555555555556666566665544      4445666666653322  


Q ss_pred             ccceechhHHHHHHHHHHHHHHHhhCCcchhhHHHHHHHHHHHHhhHHHHHHHHHHhhcccchhh--------HHHHHHH
Q 004796           74 EAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAEDNTS--------ALASISQ  145 (730)
Q Consensus        74 ~~i~~p~~v~~~~~lG~~~~vla~llP~P~lA~~~~~~~~~~~~~~~~~~l~~~v~~f~~~~~~~--------~~~~~s~  145 (730)
                       .+..+..=....++|++.|++..++-||.+|..++++...+..+.+.+.+...++.|+..+..+        -..+-..
T Consensus       144 -~~~~A~~R~~~I~iGv~i~l~vsi~IfPvwAg~~Lh~~~a~~leklA~~le~~v~~y~~~~~~~~~~~~~~~~~~~~~~  222 (406)
T PF11744_consen  144 -FLMLAVWRLLTIVIGVAICLLVSIFIFPVWAGEDLHKLTAKNLEKLANSLEGCVEEYFKCSEDEILDYQQESDDPLLQG  222 (406)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHheeechhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhcccccccccccHHHHh
Confidence             2333333346779999999999999999999999999999999999999999999999653221        0111111


Q ss_pred             hhhhhhhHHHHHHHHHhhccccccccccccccccccCChhhhhhhccccchhHHHHHHh
Q 004796          146 AKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSYYMNPGEKLQDLEIPLKGMQMAVTS  204 (730)
Q Consensus       146 ~k~l~~a~~~~l~~i~~~~~~~~wE~~~~~~f~~~~~~~~~~~~~L~~~Lr~m~~al~~  204 (730)
                      =|...+    .-++.+.......||..-++| +  ...|++.+.++..-||--.+.+..
T Consensus       223 yk~vl~----Sk~~eesL~~~A~WEP~HG~f-~--f~~Pw~~Y~kig~~lR~cay~v~A  274 (406)
T PF11744_consen  223 YKSVLN----SKSQEESLANFARWEPPHGRF-R--FRHPWKQYLKIGALLRHCAYCVEA  274 (406)
T ss_pred             hhHHhC----CcccHHHHhhhhhhcccccCC-c--cCCcHHHHHHHHHHHHHHHHHHHH
Confidence            111111    123455567888999877764 3  444555555666666655543333

; GO: 0010044 response to aluminum ion

>PF11168 DUF2955: Protein of unknown function (DUF2955); InterPro: IPR022604 Some members in this group of proteins with unknown function are annotated as membrane proteins

Probab=97.32  E-value=0.0038  Score=60.16  Aligned_cols=137  Identities=15%  Similarity=0.196  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 004796          329 AFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAISFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPW  408 (730)
Q Consensus       329 AlK~alA~~La~~la~~~~l~~g~WA~lTv~iV~qp~~G~T~~~~~~RilGTvlGav~g~l~~~l~~~~~~l~~l~L~~w  408 (730)
                      ++|.+.+.+++..++..++.+.|+-+++-.++.+.+..--+.+...+=+..+++=+..|.++..++.++|....+.++..
T Consensus         2 ~LRia~g~~l~l~~~~~~~~~~p~~~pvf~~~lL~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~ll~~~P~~~~l~v~l~   81 (140)
T PF11168_consen    2 ALRIAFGVTLGLFLSKLFGWPLPFFAPVFPAILLGMVPPPPLKMLLQLLLVALLTALEGLLLSGLLQDYPVVMLLLVFLL   81 (140)
T ss_pred             eeehhHHHHHHHHHHHHHCCCchHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            57899999999999999999999999999988886666667777788888888888899999999999887654444333


Q ss_pred             HHHHHHHh-hhhhhhhhhHHHHHhhhhheecccCCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 004796          409 FIFTAFLR-RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLL  469 (730)
Q Consensus       409 i~~~~fl~-~~~~Yg~ag~ita~~~~iiil~~~~~~~p~~~A~~Ri~ei~IGiviallV~~l  469 (730)
                      ...+.+.. +...+.. |.... +..+++..  -...+...+.++......|+++++++.++
T Consensus        82 ~~~~f~~~~~~~~~l~-~~~~l-v~~~ii~~--f~~~~~~~~~~l~~~l~~~~~iav~i~~l  139 (140)
T PF11168_consen   82 FFWSFYRMSRGPKFLF-GTMLL-VGLSIIPV--FASYNTADAEDLILSLVLAILIAVLIAAL  139 (140)
T ss_pred             HHHHHHHHhCCCchHH-HHHHH-HHHHHHHH--HHhcCcchHHHHHHHHHHHHHHHHHHHHh
Confidence            33333332 2222222 21111 11111111  01123467888899999999999888764

However, this cannot be confirmed.

>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi

Probab=95.25  E-value=0.061  Score=61.66  Aligned_cols=199  Identities=14%  Similarity=0.100  Sum_probs=115.7

Q ss_pred             hhhHHHhhhhhHHHHHHh---CCC----------------ccc------------------h---hhHHHHHHHHHHHhh
Q 004796            3 LYATVQTVGPAILSLKLI---GPA----------------RFT------------------S---TTTALAVALAAYVVA   42 (730)
Q Consensus         3 l~~t~~~~~~~~~~l~~~---~~~----------------~~~------------------~---~~~~~~va~~~f~v~   42 (730)
                      +.|++.|.+-+++.+|..   .|+                ..+                  .   ++.+++...+.++.+
T Consensus        73 ~~g~~~g~~~~~l~~~~a~~aR~~~t~a~l~~~~~~~~~~~s~~~~~~~~~~~i~~G~~~~a~~saV~av~l~~~i~~~~  152 (459)
T PF10337_consen   73 LLGVCLGWAWGLLAMYIAVAARPHDTQARLQQLQQSAGACTSGPNPAACAQQLIFDGFFYDARASAVFAVFLFVFIYFHG  152 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhccccCCCChhHHHHHhhcccceecchHHHHHHHHHHHHHHHHH
Confidence            567888888888888883   333                111                  1   123455555566666


Q ss_pred             ccCCCchh-HHHHHhhchheeeEEEEecCCc--c-ccceechhHHHHHHHHHHHHHHHhhCCcchhhHHHHHHHHHHHHh
Q 004796           43 LPEGTHMK-AKRIALGQIVITYVIGFVNGER--T-EAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSE  118 (730)
Q Consensus        43 ~p~~t~~v-~krial~~i~i~~v~~~~~~~~--t-~~i~~p~~v~~~~~lG~~~~vla~llP~P~lA~~~~~~~~~~~~~  118 (730)
                      +-.+..|- .==+-++.|++.....+  +..  + .....+..+....++|+.+++++.++=||..+...+.+.+..+.+
T Consensus       153 ~lRa~~p~~~~~~I~~~I~~~i~~t~--g~~~p~~~~~~l~~~ll~P~~ig~ai~~~vslliFP~sss~~~~~~~~~~l~  230 (459)
T PF10337_consen  153 WLRAKNPKLNFPVIFGSIFVDIFLTY--GPLFPTFFAYTLGKTLLKPFLIGIAIALVVSLLIFPESSSHVVLKSMEDYLR  230 (459)
T ss_pred             HHHHhCcchHHHHHHHHHHHHHHHHh--CcCcCcchHHHHHHHHHHHHHHHHHHHHHHheeecCCCchHHHHHHHHHHHH
Confidence            55433442 22223333333222222  221  2 345556677789999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhcccc--hhhHHHHHHHhhhhhhhHHHHHHHHHhhccccccccccccccc-cccCChhhhhhhccccc
Q 004796          119 NSSERLKLYVKAFCAED--NTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLR-SYYMNPGEKLQDLEIPL  195 (730)
Q Consensus       119 ~~~~~l~~~v~~f~~~~--~~~~~~~~s~~k~l~~a~~~~l~~i~~~~~~~~wE~~~~~~f~-~~~~~~~~~~~~L~~~L  195 (730)
                      -+.+.++.-.+.|-..+  ++....--.+.+....+....+..++.....+..|-...+ +. +-.+.-.+.+.++..|+
T Consensus       231 ~l~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~~~~l~~~l~~~~~Eis~gr-l~~~Dl~~i~~~lr~l~~~~  309 (459)
T PF10337_consen  231 LLKKALDAQRNFLQSSEPSDEFDAKSLKKLKATKAKLRALYAKLQAALRFLKLEISYGR-LSPDDLKPIFSLLRSLMIPL  309 (459)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHeeec-CCHHHHHHHHHHHHHHHHHH
Confidence            99999999888776543  2221111233333344444456666666665666632222 11 11111112344555555


Q ss_pred             hhHHHHHHh
Q 004796          196 KGMQMAVTS  204 (730)
Q Consensus       196 r~m~~al~~  204 (730)
                      .||...+++
T Consensus       310 ~gL~~~~~~  318 (459)
T PF10337_consen  310 SGLSSFCDL  318 (459)
T ss_pred             HHHHHHHHH
Confidence            555555555

Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.

>TIGR02865 spore_II_E stage II sporulation protein E

Probab=92.76  E-value=20  Score=44.05  Aligned_cols=34  Identities=24%  Similarity=0.359  Sum_probs=21.6

Q ss_pred             hhhhhhhHHHHHHhHHHHHHHHH-------HHHHHHHHHHh
Q 004796          675 RSQVVLSLSALGYCMQGLIRETK-------LIEEGIKELVQ  708 (730)
Q Consensus       675 ~~~~~~~~~~~~fc~~~~~~e~~-------~~~~~~~~l~~  708 (730)
                      +.-++--+..++=-|+++++|..       +.|+.|++.+.
T Consensus       435 R~~va~Ql~~~s~~l~~~a~e~~~~~~~~~~~e~~i~~~L~  475 (764)
T TIGR02865       435 RRLVAEQLKGVAESVEDIAKEINLEIVFHQLLEEKIIRALN  475 (764)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHH
Confidence            34444456678888888888864       35555655554

Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.

>PF10334 DUF2421: Protein of unknown function (DUF2421); InterPro: IPR018820 This domain is found in several uncharacterised proteins and in Brefeldin A-sensitivity protein 4, which is a zinc finger protein containing five transmembrane domains

Probab=85.82  E-value=2.9  Score=43.49  Aligned_cols=106  Identities=15%  Similarity=0.052  Sum_probs=69.9

Q ss_pred             CcchhhHHHHHHHHHHHHhhHHHHHHHHHHhhcccc-hhhH--HHHHHHhhhhhhhHHHHHHHHHhhccccccccccccc
Q 004796          100 PYPRLACCQVKKNCKLLSENSSERLKLYVKAFCAED-NTSA--LASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKF  176 (730)
Q Consensus       100 P~P~lA~~~~~~~~~~~~~~~~~~l~~~v~~f~~~~-~~~~--~~~~s~~k~l~~a~~~~l~~i~~~~~~~~wE~~~~~~  176 (730)
                      |||..|.+.+|+.+......++..+-.+++.+..+. +.+.  ..-.-............|.+++....-+.||-...+-
T Consensus         1 P~P~Sar~~vRk~La~~l~~l~~~Y~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~l~~~k~Ep~l~G~   80 (229)
T PF10334_consen    1 PRPPSARRHVRKTLASTLSELGDLYSLVVSFWSRRLDNPDGHIDAEEDAIRKRFLKLQQSLNSLRTLLAFAKFEPSLKGR   80 (229)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence            999999999999999999999999999998888753 2111  0001112222334456788888899999999553332


Q ss_pred             cc-cccCChhhhhhhccccchhHHHHHHhc
Q 004796          177 LR-SYYMNPGEKLQDLEIPLKGMQMAVTSV  205 (730)
Q Consensus       177 f~-~~~~~~~~~~~~L~~~Lr~m~~al~~~  205 (730)
                      |- +.|.+--+..++|..-|-.|..+.+..
T Consensus        81 FP~~~Y~~l~~~~~~il~~l~~l~~~~~~l  110 (229)
T PF10334_consen   81 FPKETYQRLLELCQNILDLLSLLSYVSTRL  110 (229)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            43 344444444556666666666655544

Brefeldin A-sensitivity protein 4 null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport [, , ].

>PF12805 FUSC-like: FUSC-like inner membrane protein yccS

Probab=80.70  E-value=9.7  Score=40.84  Aligned_cols=120  Identities=18%  Similarity=0.128  Sum_probs=77.7

Q ss_pred             hHHHhhhhhHHHHHHhCCCccchhhHHHHHHHHHHHhhccCCCchhHHHHHhhchheeeEEEEecCCccccceechhHHH
Q 004796            5 ATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIVITYVIGFVNGERTEAVMHPLHVAA   84 (730)
Q Consensus         5 ~t~~~~~~~~~~l~~~~~~~~~~~~~~~~va~~~f~v~~p~~t~~v~krial~~i~i~~v~~~~~~~~t~~i~~p~~v~~   84 (730)
                      .|..|...+.+...+.+|+-   +....++++.+|+.++-..-++-+-.|+++...+ +|.+...+... +  .+..-+.
T Consensus         4 ~~~~~~~~~s~~~~l~~~~~---~l~~~~~~~~~F~~~ml~~~G~r~~~i~~~~Ll~-~v~t~~~~~~~-~--~~~~~~~   76 (284)
T PF12805_consen    4 ATLLCFALASLLVGLLFPYP---WLLILVLALLTFFFGMLGVYGPRAATIGFATLLV-AVYTMAGPSPG-P--EALEHAL   76 (284)
T ss_pred             HHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHhCCCcc-h--HHHHHHH
Confidence            44445544445555555553   3334555566666666644466777887766543 33333333321 1  3334557


Q ss_pred             HHHHHHHHHHHHhhCCcchhhHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 004796           85 STAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSSERLKLYVKAF  131 (730)
Q Consensus        85 ~~~lG~~~~vla~llP~P~lA~~~~~~~~~~~~~~~~~~l~~~v~~f  131 (730)
                      ...+|.+...+..++=||..-.+-+|+.+...-+..++-++.-.+-|
T Consensus        77 l~~~Gglwy~~lsl~~~~l~p~r~~rqaLa~~y~~lA~yl~~ka~~~  123 (284)
T PF12805_consen   77 LFLAGGLWYLLLSLLWWPLRPYRPVRQALAECYRALADYLRAKARFF  123 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            77788888888888888888889999999999999999998877666

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	730
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-12
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 81.1 bits (199), Expect = 8e-16
 Identities = 83/604 (13%), Positives = 170/604 (28%), Gaps = 199/604 (32%)

Query: 128 VKAFCAEDNTSALAS---ISQAKLLTIGGTKFIQ-NIKRYQESMKWERLPLKFLRSYYMN 183
           +     E    ++ +   I Q   L      F + N+ R Q        P   LR     
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ--------PYLKLR----- 141

Query: 184 PGEKLQDLE----IPLKGMQ------MAVTSVTSFPVQILDGELKECVKKLDEHIS-LTI 232
             + L +L     + + G+       +A+    S+ VQ           K+D  I  L +
Sbjct: 142 --QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ----------CKMDFKIFWLNL 189

Query: 233 KQAQSCDSLTVPESNAEDIMKFLQTL---------------QNIPTTTQELSSYFFLFCM 277
           K    C+S        E +++ LQ L                NI      + +       
Sbjct: 190 KN---CNS-------PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL----R 235

Query: 278 KLLQWKSSPNQSTNCLK--DDTVKEYEGSSNGFSFKEVWSNW---SMKVKSKRLV----- 327
           +LL+ K       NCL    +                V +     +  +  K L+     
Sbjct: 236 RLLKSKPYE----NCLLVLLN----------------VQNAKAWNAFNLSCKILLTTRFK 275

Query: 328 --------------------PAFKCSLSLGL-AVLFGLLYSK-PNGIWSGLPVAISFAAA 365
                                         L            P  + +  P  +S  A 
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 366 --REAT-----FKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRS 418
             R+       +K  N     T++ +   VL    + +     F  L    +F      S
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK----MFDRL---SVF----PPS 384

Query: 419 RMYGQAGGISAVIGAVLILGRKNFGPPSEFAI--ARIVETFIGLSCSIMIDLLFQPTRAS 476
                            I       P    ++    ++++       ++++ L +     
Sbjct: 385 ---------------AHI-------PTILLSLIWFDVIKS----DVMVVVNKLHK----Y 414

Query: 477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPN---- 532
           +L + Q  +S  ++      + ++      L   + +         F  +  + P     
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALH--RSIVDHYNIPKTFDSDDLIPPYLDQY 472

Query: 533 -FWFFPFHI--ACYSKLLGTLTKM-VDLLLFAAHSVGFLEQDSQRIATSWKNEVHELD-- 586
            +     H+    + + +     + +D          FLEQ  +  +T+W      L+  
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDF--------RFLEQKIRHDSTAWNASGSILNTL 524

Query: 587 SDLELLKEKVGSSIKCFEDVTTIKSLATIEKELEKNNISYD----LELGKSKNPNGISDL 642
             L+  K  +  +   +E +  + ++     ++E+N I       L +        I   
Sbjct: 525 QQLKFYKPYICDNDPKYERL--VNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI--F 580

Query: 643 DEAA 646
           +EA 
Sbjct: 581 EEAH 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 68.3 bits (166), Expect = 6e-12
 Identities = 83/614 (13%), Positives = 165/614 (26%), Gaps = 210/614 (34%)

Query: 215 GELKECVKKLDEHISLTIKQAQSC----DSLTVPESNAE--DIMKFLQTLQNIPTTTQEL 268
           GE +   K +             C    D      S  E   I+                
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII-------MSKDAVSGT 64

Query: 269 SSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVP 328
              F+    K               +++ V+++       ++K + S    + +   ++ 
Sbjct: 65  LRLFWTLLSK---------------QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109

Query: 329 AFKCSLSLGLAVLFGLLY-SKPNGIWSGLPVAISFAAAREATF-----KVANIKAQGTVL 382
                           +Y  + + +++   V   +  +R   +      +  ++    V 
Sbjct: 110 R---------------MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV- 153

Query: 383 GTVYGVLGC------------------FLFERF--------------------------- 397
             + GVLG                     F+ F                           
Sbjct: 154 -LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 398 ----------LPIRFLSLIPWFIFTAFLRR---SRMYGQAGGISAVIGAVLILGRKNFGP 444
                     + +R  S+         LRR   S+ Y            +L+L       
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAE------LRRLLKSKPYEN---------CLLVL------- 250

Query: 445 PSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLA---KVQLSKSLATLHDCIG-----S 496
                 A+    F  LSC I++      TR   +        +  ++  H  +       
Sbjct: 251 -LNVQNAKAWNAF-NLSCKILL-----TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 497 MSLQSSQASWLENQ-KRLKMQVTE---LA-KFIGEA-EVEPNFW-FFPFHIACYSKLLGT 549
            SL      +L+ + + L  +V          I E+       W  +  H+ C  KL   
Sbjct: 304 KSL---LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK-HVNC-DKLTTI 358

Query: 550 LTKMVDLL-------LFAAHSVGFLEQD----SQRIATSWKNEVHELDSD-LELLKEKVG 597
           +   +++L       +F   SV F        +  ++  W + +       +  L +   
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSV-FPP-SAHIPTILLSLIWFDVIKSDVMVVVNKLHKY-- 414

Query: 598 SSIKC--FEDVTTIKSL-------ATIEKELEKNNI-SYDLELGKSKNPNGISDLDEAAM 647
           S ++    E   +I S+          E  L ++ +  Y++      +      LD    
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD---- 470

Query: 648 GKLICSYL-QHAKELVDKIKATEGEK-ELRSQVVLSLSALGYCMQGLIRETKLIEEGIKE 705
            +   S++  H K           E+  L   V L    L         E K+  +    
Sbjct: 471 -QYFYSHIGHHLK------NIEHPERMTLFRMVFLDFRFL---------EQKIRHDST-- 512

Query: 706 LVQWENPSSNVNLL 719
              W    S +N L
Sbjct: 513 --AWNASGSILNTL 524

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.9 bits (97), Expect = 2e-04
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 14/42 (33%)

Query: 110 KKNCKLLSENSSERLKLYVKAFCAEDNTSALASISQAKLLTI 151
           K+  K L + S   LKLY     A+D+  ALA I +A   T+
Sbjct: 19  KQALKKL-QAS---LKLY-----ADDSAPALA-I-KA---TM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00