Citrus Sinensis ID: 005633

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680------
Protein Sequence
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Secondary Structure (PSIPRED)
ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccEEEEccccHHHHHHHHHccccEEEEEEEccccEEEcccccEEEEEccEEEEEEEcccEEEEEEEEEEEEcccccEEEEEEEEccEEccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcHHHHHHHHHHcccccHHHHHHccccccccccccccccccHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccEEEEEEEEcccccccccccccccEEEccccccccccEEEcccHHHHHEEEEEccccEEEEEEEccccccccccccEEEEcccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEccccEcccHHHHHHHHHHHHHHHHHccccccccccccccccHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEcccEEccccccccccccccccccccHHHHccHHHHHcccHHHcccccccccHHHHHHHHHccHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKampqqrpqlpqhfvqqqnlplrspakpvyepgmcarrLTHYMYqqqhrpevrfshhdesVVSLWCITIVIcnsrvfvqdnNIEFWRKFVAEYfapnakkkWCVSmygsgrqatgvfpqdvwhceicnrkpgrgfeaTVEVLPRLFKIKYesgtleellyvdmpreyqnaSGQIVLDYAKAIQESVFEQLRVvrdgqlrivfspdlkicswEFCARRHeeliprrllipqVSQLGAAAQKYQAATQnassnlsapelqnnCNMFVASARQLAKALEvplvndlgytkrYVRCLQISEVVNSMKDLIdysrvtgtgpmeslakfprrtsgasgfhspsqqpedQLQQQQQQQQtvgqnsnsESSVQANAMQLATSNgvanvnnslnpasasstaSTIVGLLHqnsmnsrqqntvnnasspyggssvqmpspgssnnipqaqpnpspfqsptpsssnnppqtshsaltaanhmssasspanisvqqpalsgeadpralsgdadpsdsqSAVQKILHEMMLCshlnggsgggggmvgvgslgndvknvndimatgnntvlnggnglvgngtvnnnpgigtggygnmggglgqSAMVNGIRAAmgnnsmmngRVGMTAMARDQSMNHQQDLGNQLLNglgavngfnnlqfdwkpsp
Flexible Loop (DISEMBL)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQlrvvrdgqlrivfspdlkicSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFnnlqfdwkpsp
Low Complexity Region (SEG)
msrqssqaaaaqmnllqqqrylqlqqqhqqqqllkampqqRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSqqpedqlqqqqqqqqtvgqNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAqpnpspfqsptpsssnnppqtshsALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHlnggsgggggmvgvgslgnDVKNVNDIMAtgnntvlnggnglvgngtvnnnpgigtggygnmggglgQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMnhqqdlgnqllnglgavngFNNLQFDWKPSP
Disordered region (IsUnstruct)
***************************************************************YEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAA*********************NNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVT**************************************************************************************************************************************************************************************************************************************KNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGI*********************************QLLNGLGAVNGFNNLQFDW****
Disordered Region (DISOPRED)
*********************************************************************************************SVVSLWCITI*************IEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS***************************************************GYTKRYVRCLQISEVVNSMKD******************************************************************************************************************************************************************************************************************************************************************************************************************************************LGAVNGFNNLQFDW****
Disordered Region (DISEMBL)
***********QMNLLQQQRYLQ******************PQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS******************NLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFP******************************************NAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASS**************SNNI************************************************************************VQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Disordered Region (DISPRO)
********AAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQ****************************LAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTS***********************************************************************************************************************************************************************************AVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	686	2.2.26 [Sep-21-2011]
Q8W234	877	Transcriptional corepress	yes	no	0.813	0.636	0.632	1e-174
O74364	391	Adhesion defective protei	yes	no	0.362	0.636	0.222	3e-09

>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1

 Score =  613 bits (1581), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 411/650 (63%), Positives = 456/650 (70%), Gaps = 92/650 (14%)

Query: 57  RSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNN 116
           R P KPVYEPGM A+RLT YMY+QQHRPE                            DNN
Sbjct: 294 RPPLKPVYEPGMGAQRLTQYMYRQQHRPE----------------------------DNN 325

Query: 117 IEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVL 176
           IEFWRKFVAEYFAPNAKK+WCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT EVL
Sbjct: 326 IEFWRKFVAEYFAPNAKKRWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVL 385

Query: 177 PRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVF 236
           PRLFKIKYESGTLEELLYVDMPRE QN+SGQIVL+YAKA QESVFE LRVVRDGQLRIVF
Sbjct: 386 PRLFKIKYESGTLEELLYVDMPRESQNSSGQIVLEYAKATQESVFEHLRVVRDGQLRIVF 445

Query: 237 SPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCN 296
           SPDLKI SWEFCARRHEELIPRRLLIPQVSQLG+AAQKYQ A QNA+++ + PELQNNCN
Sbjct: 446 SPDLKIFSWEFCARRHEELIPRRLLIPQVSQLGSAAQKYQQAAQNATTDSALPELQNNCN 505

Query: 297 MFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAK 356
           MFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGP+ESLAK
Sbjct: 506 MFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPIESLAK 565

Query: 357 FPRRTSGASGFHSPS-QQPEDQLQ-----------------QQQQQQQTVGQNSNSE-SS 397
           FPRRT  +S    PS QQ  DQL+                 QQQQQQQTV QN+NS+ SS
Sbjct: 566 FPRRTGPSSALPGPSPQQASDQLRQQQQQQQQQQQQQQQQQQQQQQQQTVSQNTNSDQSS 625

Query: 398 VQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNN-ASSPYGG 456
            Q   MQ   SNG   VN + N ASAS++ S+I GL+HQNSM  R QN   N  +SPYGG
Sbjct: 626 RQVALMQGNPSNG---VNYAFNAASASTSTSSIAGLIHQNSMKGRHQNAAYNPPNSPYGG 682

Query: 457 SSVQMPSPGSSNNI----PQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPA 512
           +SVQM SP SS  +     Q Q N   FQSPT SS+NN    S + + + NHM S +SPA
Sbjct: 683 NSVQMQSPSSSGTMVPSSSQQQHNLPTFQSPTSSSNNN--NPSQNGIPSVNHMGSTNSPA 740

Query: 513 NISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSL 572
              +QQ   +GE D           +  S+VQKIL+E+++ +  +  S  GG MVG GS 
Sbjct: 741 ---MQQ---AGEVD----------GNESSSVQKILNEILMNNQAHNNS-SGGSMVGHGSF 783

Query: 573 GNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRA 632
           GND K   ++ ++G          L+ NG VNNN     GG G  GGG+GQS   NGI  
Sbjct: 784 GNDGKGQANVNSSGV---------LLMNGQVNNNNNTNIGGAGGFGGGIGQSMAANGINN 834

Query: 633 AMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDW 682
             GNNS+MNGRVGM  M RD   N QQDLGNQL   LGAVNGFNN  FDW
Sbjct: 835 INGNNSLMNGRVGM--MVRDP--NGQQDLGNQL---LGAVNGFNN--FDW 875

DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression.
Arabidopsis thaliana (taxid: 3702)

>sp|O74364|ADN1_SCHPO Adhesion defective protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adn1 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 65/314 (20%)

Query: 86  VRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGR 145
           +R   ++E ++S W  T+           ++I +WR+FV +++                 
Sbjct: 22  LRLLQYNEQLMSGWESTM----------KDDIGYWRRFVHDFYT---------------- 55

Query: 146 QATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYV-DMPREYQNA 204
              G F  ++ + +  N++P + FE +   LPR   + Y  G L+++ ++    +E+   
Sbjct: 56  -EKGTFRYNIDYKDSPNQEP-KLFELSYAALPRFLYLSY-CGKLKKMSFLLGNTKEFAIP 112

Query: 205 SGQIVLDYAKAIQESVFEQ----LRVVRDGQLRIVF--SPDLKICSWEFCARRHEELIPR 258
           +    ++ ++A   S+  Q    ++V+  G LR  F  +P LK+ S EF A  H E + R
Sbjct: 113 NNGYFVESSRA---SILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLR 169

Query: 259 RLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQN-NCNMFVASARQLAKALEVPLVNDL 317
            L+    S   + ++  Q   Q+       P  ++ N N   +             VN+ 
Sbjct: 170 ELMT-NASLALSQSRPPQNQIQHDGVKSEDPSSESVNINSSSSLLPDSP-------VNEY 221

Query: 318 GYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQ 377
           G     +R ++I+E ++ M+DLI ++    +GP  +L KF                    
Sbjct: 222 GLEPHIMRFMEITETISGMRDLIAFTLAQRSGPTSALHKF-----------------ATA 264

Query: 378 LQQQQQQQQTVGQN 391
           LQQQ Q Q++   N
Sbjct: 265 LQQQHQMQKSTSSN 278

Probable transcriptional regulator involved in cell adhesion.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	686
356509338	911	PREDICTED: transcriptional corepressor S	0.934	0.703	0.766	0.0
224062956	919	predicted protein [Populus trichocarpa]	0.855	0.638	0.787	0.0
255558438	905	Transcriptional corepressor SEUSS, putat	0.930	0.704	0.784	0.0
356552765	915	PREDICTED: transcriptional corepressor S	0.935	0.701	0.743	0.0
356546794	928	PREDICTED: transcriptional corepressor S	0.938	0.693	0.728	0.0
356515969	953	PREDICTED: transcriptional corepressor S	0.887	0.639	0.764	0.0
225457805	913	PREDICTED: transcriptional corepressor S	0.934	0.702	0.773	0.0
449466018	904	PREDICTED: LOW QUALITY PROTEIN: transcri	0.930	0.705	0.702	0.0
449516395	911	PREDICTED: LOW QUALITY PROTEIN: transcri	0.930	0.700	0.700	0.0
49523817	901	SEU3A protein [Antirrhinum majus]	0.902	0.687	0.702	0.0

>gi|356509338|ref|XP_003523407.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/689 (76%), Positives = 578/689 (83%), Gaps = 48/689 (6%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MS QSSQAAAAQ+NLL+  R LQLQQQHQQQQLLKAMPQQR QL     QQQN+P+RSP 
Sbjct: 268 MSNQSSQAAAAQINLLRHHRLLQLQQQHQQQQLLKAMPQQRSQL-PQQFQQQNMPMRSPV 326

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFW 120
           KP YEPGMCARRLTHYMYQQQHRPE                            DNNI+FW
Sbjct: 327 KPAYEPGMCARRLTHYMYQQQHRPE----------------------------DNNIDFW 358

Query: 121 RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 180
           RKFVAEYFAPNAKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF
Sbjct: 359 RKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 418

Query: 181 KIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 240
           KIKYESGTLEELLYVDMPREY N+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL
Sbjct: 419 KIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 478

Query: 241 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVA 300
           KICSWEFCARRHEELIPRRLLIPQVSQLG  AQKYQ+ TQNA+ N+S PELQNNCNMFVA
Sbjct: 479 KICSWEFCARRHEELIPRRLLIPQVSQLGTVAQKYQSFTQNATPNVSVPELQNNCNMFVA 538

Query: 301 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRR 360
           SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR TGTGPMESLAKFPRR
Sbjct: 539 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRR 598

Query: 361 TSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSLN 419
           TSG+SG      Q  ++  QQQQQQQ V  NSN + +SVQA AMQ+A+SNG+ +VNN++N
Sbjct: 599 TSGSSGPRG-QAQQHEEQLQQQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNNTVN 657

Query: 420 PASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSP 479
           PAS  ++ STIVGLLHQNSMNSRQ N++NNASSPYGGSSVQ+PSPGSS+ +PQAQPN SP
Sbjct: 658 PASTLTSTSTIVGLLHQNSMNSRQPNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSP 717

Query: 480 FQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISV--QQPALSGEADPRALSGDADPS 537
           FQSPTPSSSNNPPQTSH ALT+ANHMS+ +SPANIS+  QQP++SGE          DPS
Sbjct: 718 FQSPTPSSSNNPPQTSHPALTSANHMSTTNSPANISMQQQQPSISGE---------PDPS 768

Query: 538 DSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGL 597
           D+QS+VQKI+HEMM+ S +NG      GMVGVGSLGNDVKNVN I+    NT LNGGNGL
Sbjct: 769 DAQSSVQKIIHEMMMSSQINGNG----GMVGVGSLGNDVKNVNGILPVSANTGLNGGNGL 824

Query: 598 VGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNH 657
           VGNGT+N+N G+G G YG M  GLGQSAM NGIR+AM NNS+MNGR GM ++ARDQ+MNH
Sbjct: 825 VGNGTMNSNSGVGVGNYGTM--GLGQSAMPNGIRSAMVNNSIMNGRGGMASLARDQAMNH 882

Query: 658 QQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QQD+ NQLL+GLGAV GF+NLQFDWKPSP
Sbjct: 883 QQDMSNQLLSGLGAVGGFSNLQFDWKPSP 911

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062956|ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|222842673|gb|EEE80220.1| predicted protein [Populus trichocarpa]

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/634 (78%), Positives = 537/634 (84%), Gaps = 47/634 (7%)

Query: 53  NLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFV 112
           N+PLRSP KPVYEPGMCARRLT+YM+QQQ RPE                           
Sbjct: 333 NIPLRSPVKPVYEPGMCARRLTNYMHQQQRRPE--------------------------- 365

Query: 113 QDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEAT 172
            DNNIEFWRKFVAE+FAP+AKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT
Sbjct: 366 -DNNIEFWRKFVAEFFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEAT 424

Query: 173 VEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQL 232
           VEVLPRLFKIKYESGTLEELLYVDMPREYQN+SGQIVLDYAKAIQESVFEQLRVVRDGQL
Sbjct: 425 VEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQL 484

Query: 233 RIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQ 292
           RIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLS PELQ
Sbjct: 485 RIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSVPELQ 544

Query: 293 NNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPME 352
           NNCN+FVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR TGTGPME
Sbjct: 545 NNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPME 604

Query: 353 SLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVA 412
           SL+KFPRRT  + GFHS +QQ     ++QQQQQQT+  NSNS+ S     MQ+A SNG+A
Sbjct: 605 SLSKFPRRTGASIGFHSQAQQ----PEEQQQQQQTITANSNSDQSSAQATMQIAASNGMA 660

Query: 413 NVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQ 472
           +VNNSLN AS ++ AS IVGL+HQNSMNSRQQN++NNASSPYGG+SVQ+PSPGSS+ IPQ
Sbjct: 661 SVNNSLNTASTTTYASAIVGLVHQNSMNSRQQNSINNASSPYGGNSVQIPSPGSSSTIPQ 720

Query: 473 AQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSG 532
           AQPNPSPFQSPTPSSSNNPPQ SHSALTA NH+SS +SPANI +QQP LSGEAD      
Sbjct: 721 AQPNPSPFQSPTPSSSNNPPQASHSALTAVNHISSTNSPANIPLQQPTLSGEADH----- 775

Query: 533 DADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLN 592
                DSQS+VQK LHEMML S LNG +GG     GVGSLGN+VKNVN I+ TGNNTVLN
Sbjct: 776 ----GDSQSSVQKFLHEMMLTSQLNG-TGGMV---GVGSLGNEVKNVNGILPTGNNTVLN 827

Query: 593 GGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARD 652
           GGNGLVGNG VN++ GI  G      GGL QS MVNGIRAAMGNNSMMNGR+GM +M RD
Sbjct: 828 GGNGLVGNGAVNSS-GI-GGAGYGTMGGLAQSVMVNGIRAAMGNNSMMNGRMGMPSMVRD 885

Query: 653 QSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QSMNHQQDLGNQLL+GLGAVNGF+NLQFDWKPSP
Sbjct: 886 QSMNHQQDLGNQLLSGLGAVNGFSNLQFDWKPSP 919

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558438|ref|XP_002520244.1| Transcriptional corepressor SEUSS, putative [Ricinus communis] gi|223540463|gb|EEF42030.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]

 Score =  932 bits (2409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/688 (78%), Positives = 585/688 (85%), Gaps = 50/688 (7%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQAAAAQ+NLL QQR   +Q QHQQ Q+LK++P QRPQL     QQQNLPLR P 
Sbjct: 266 MSRQSSQAAAAQINLLHQQR--IIQMQHQQHQILKSIPSQRPQL-SQQFQQQNLPLRPPV 322

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFW 120
           KP YEPGMCARRLTHYMYQQQHRPE                            DNNIEFW
Sbjct: 323 KPAYEPGMCARRLTHYMYQQQHRPE----------------------------DNNIEFW 354

Query: 121 RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 180
           RKFVAEYFAP+AKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF
Sbjct: 355 RKFVAEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 414

Query: 181 KIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 240
           KIKYESGTLEELLYVDMPREYQN+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL
Sbjct: 415 KIKYESGTLEELLYVDMPREYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 474

Query: 241 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVA 300
           KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSN+S PELQNNCN+FVA
Sbjct: 475 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNVSVPELQNNCNLFVA 534

Query: 301 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRR 360
           SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGPMESLAKFPRR
Sbjct: 535 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMESLAKFPRR 594

Query: 361 TSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSLN 419
           TS +SG HS S   +   +Q QQQQQT+ QNSNS+ SS+QA  MQ+A SNGV++VNNS+ 
Sbjct: 595 TSASSGLHSQS---QQPEEQLQQQQQTMPQNSNSDQSSIQAGGMQIAASNGVSSVNNSIT 651

Query: 420 PASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSP 479
            ASAS++AS IVGLLHQNSMNSRQQ+++NNASSPYGG+SVQ+PSPGSS+ IPQAQPNPSP
Sbjct: 652 TASASTSASAIVGLLHQNSMNSRQQSSLNNASSPYGGNSVQVPSPGSSSTIPQAQPNPSP 711

Query: 480 FQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDS 539
           FQSPTPSSSNNP QTSHSALTAANH+SS +SPAN  +QQP         ALS DAD SDS
Sbjct: 712 FQSPTPSSSNNPTQTSHSALTAANHISSTNSPANNPLQQP---------ALSSDADHSDS 762

Query: 540 QSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVG 599
           QS+VQKI+HEMM+ + LN    G GGM GVG LGND+KNVN I++T NN V+NGGNGLVG
Sbjct: 763 QSSVQKIIHEMMMSNQLN----GTGGMAGVGPLGNDMKNVNGILSTSNNGVVNGGNGLVG 818

Query: 600 NGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNH-Q 658
           NGTV N+ GIG GG+G MGGGLGQSAM+NGIRA MGNNSM+NGRVGM +M R+ SMNH Q
Sbjct: 819 NGTVTNS-GIGGGGFGPMGGGLGQSAMINGIRATMGNNSMLNGRVGMQSMVREPSMNHQQ 877

Query: 659 QDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QDLGNQLL+GLGAVNGFNNL FDWKPSP
Sbjct: 878 QDLGNQLLSGLGAVNGFNNLPFDWKPSP 905

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552765|ref|XP_003544733.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/693 (74%), Positives = 563/693 (81%), Gaps = 51/693 (7%)

Query: 1   MSRQSSQAAAAQMN--LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRS 58
           MSRQSSQAAAAQMN  L QQ+     Q Q QQQQLLK MPQQR  L Q F QQQN+P+RS
Sbjct: 267 MSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKTMPQQRSPLSQQF-QQQNMPMRS 325

Query: 59  PAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIE 118
           P KP YEPGMCARRLTHYMYQQQHRPE                            DNNIE
Sbjct: 326 PVKPAYEPGMCARRLTHYMYQQQHRPE----------------------------DNNIE 357

Query: 119 FWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPR 178
           FWRKFVAEYFAPNAKKKWCVSMYGSGRQ TGVFPQDVWHCEICN KPGRGFEAT EVLPR
Sbjct: 358 FWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNCKPGRGFEATAEVLPR 417

Query: 179 LFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP 238
           LFKIKYESGTLEELLYVDMPREY N+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP
Sbjct: 418 LFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP 477

Query: 239 DLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMF 298
           DLKICSWEFCARRHEELIPRRLLIPQVSQLG  AQKYQA TQNA+ NLS PELQNNCN+F
Sbjct: 478 DLKICSWEFCARRHEELIPRRLLIPQVSQLGVVAQKYQAFTQNATPNLSVPELQNNCNLF 537

Query: 299 VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFP 358
           VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGPM+SLAKFP
Sbjct: 538 VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFP 597

Query: 359 RRTSGASGFHSPSQQPEDQLQQQQQQQ-QTVGQNSNSE-SSVQANAMQLATSNGVANVNN 416
           RRTSG+SG HS +QQ EDQLQQQ Q     V   SN + +SVQ  AMQ+A+SNGV +VNN
Sbjct: 598 RRTSGSSGLHSQAQQSEDQLQQQSQPPQHMVPHTSNGDQNSVQTAAMQIASSNGVTSVNN 657

Query: 417 SLNPASASSTAST--IVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQ 474
           S+N ASAS++ +T  IVGLLHQNSMNSRQ N++NNASSPYGGSSVQ+PSPGSS N+PQAQ
Sbjct: 658 SVNAASASASNTTSTIVGLLHQNSMNSRQ-NSMNNASSPYGGSSVQIPSPGSSGNVPQAQ 716

Query: 475 PNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDA 534
           PN SPFQSPTPSSSNNP QTSH A+T+ANHM +A+SPANI++QQ   S       L  +A
Sbjct: 717 PNQSPFQSPTPSSSNNP-QTSHPAITSANHMGTANSPANITLQQQQTS-------LPAEA 768

Query: 535 DPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGG 594
           DPSD+QS+VQKI+HEMM+ S +NG     GGM G G LGND+KNVN I+   N+T LN G
Sbjct: 769 DPSDAQSSVQKIIHEMMISSQMNGP----GGMAGTGLLGNDMKNVNGILPGSNSTGLNSG 824

Query: 595 NGLVGNGTVNN-NPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQ 653
           +GL GNG VN+ N G+G GGYG M  GLG S M NG+R  MG+NS+MNGR GM ++ARDQ
Sbjct: 825 SGLAGNGAVNSSNSGVGVGGYGTM--GLGPSGMTNGMRPVMGHNSIMNGRGGMASLARDQ 882

Query: 654 SMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
            MNHQQDL +QLL+GLG VNGF+NLQFDWKPSP
Sbjct: 883 VMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP 915

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546794|ref|XP_003541807.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/701 (72%), Positives = 562/701 (80%), Gaps = 57/701 (8%)

Query: 1   MSRQSSQAAAAQMN--LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRS 58
           MSRQSSQAAAAQMN  L QQ+     Q Q QQQQLLKAMPQQR QL     QQQN+P+RS
Sbjct: 270 MSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKAMPQQRSQL-PQQFQQQNMPMRS 328

Query: 59  PAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIE 118
           P KP YEPGMCARRLTHYMYQQQHRP+                            DNNIE
Sbjct: 329 PVKPAYEPGMCARRLTHYMYQQQHRPD----------------------------DNNIE 360

Query: 119 FWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPR 178
           FWRKFV+EYFAPNAKKKWCVSMYG+GRQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPR
Sbjct: 361 FWRKFVSEYFAPNAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPR 420

Query: 179 LFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP 238
           LFKIKYESGTLEELLYVDMPREY N+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP
Sbjct: 421 LFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP 480

Query: 239 DLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMF 298
           DLKICSWEFCARRHEELIPRRLLIPQVSQLGA AQKYQA TQNA+ NLS PELQNNCNM 
Sbjct: 481 DLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAITQNATPNLSVPELQNNCNMV 540

Query: 299 VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFP 358
           VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR TGTGPM+SLAKFP
Sbjct: 541 VASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFP 600

Query: 359 RRTSGASGFHS----PSQQPEDQLQQQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVAN 413
           RRTSG+SG HS       Q + Q Q Q   Q  V  +SN + +SVQ  AMQ+A+SNGV +
Sbjct: 601 RRTSGSSGLHSQGQQSEDQLQQQSQPQLPPQHMVPHSSNGDQNSVQTAAMQIASSNGVTS 660

Query: 414 VNNSLNPASASSTASTIVGLLHQNSMNSRQ------QNTVNNASSPYGGSSVQMPSPGSS 467
           VNNS+N ASAS++ STIVGLLHQNSMNSRQ      QN++NNASSPYGGSSVQ+ SPGSS
Sbjct: 661 VNNSVNAASASTSTSTIVGLLHQNSMNSRQNSMNSRQNSMNNASSPYGGSSVQIASPGSS 720

Query: 468 NNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADP 527
            N+PQAQPN SPFQSPTPSSS N PQTSH ALT+ANHM +A+SPANIS+QQ   +     
Sbjct: 721 GNMPQAQPNASPFQSPTPSSS-NIPQTSHPALTSANHMGTANSPANISLQQQQQT----- 774

Query: 528 RALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGN 587
            +L  +ADPSD+QS+VQKI+HEMM+ S +N    G GGM G GSLGND+KNVN I+   N
Sbjct: 775 -SLPAEADPSDAQSSVQKIIHEMMMSSQMN----GPGGMAGAGSLGNDMKNVNGILPGSN 829

Query: 588 NTVLNGG--NGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVG 645
           NT LN G  +GLVGN  VN+N G+G GGYG +  GLG + M NG+R  MG+NS+MNGR G
Sbjct: 830 NTGLNSGSVSGLVGNVAVNSNSGVGVGGYGTI--GLGPAGMTNGMRPVMGHNSIMNGRGG 887

Query: 646 MTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           M ++ARDQ MNHQQDL +QLL+GLG VNGF+NLQFDWKPSP
Sbjct: 888 MASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP 928

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515969|ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  901 bits (2329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/653 (76%), Positives = 543/653 (83%), Gaps = 44/653 (6%)

Query: 35  KAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDES 94
           KAMPQQR QL     QQQN+ +RSPAKP YEPGMCARRLTHYMYQQQHRPE         
Sbjct: 344 KAMPQQRSQL-PQQFQQQNMSMRSPAKPAYEPGMCARRLTHYMYQQQHRPE--------- 393

Query: 95  VVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQD 154
                              DNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQ TGVFPQD
Sbjct: 394 -------------------DNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQD 434

Query: 155 VWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAK 214
           VWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREY N+SGQIVLDYAK
Sbjct: 435 VWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAK 494

Query: 215 AIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQK 274
           AIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGA AQK
Sbjct: 495 AIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQK 554

Query: 275 YQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVN 334
           YQ+ TQNA+ N+S PELQNNCNMFVASARQL KALEVPLVNDLGYTKRYVRCLQISEVVN
Sbjct: 555 YQSFTQNATPNVSVPELQNNCNMFVASARQLVKALEVPLVNDLGYTKRYVRCLQISEVVN 614

Query: 335 SMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNS 394
           SMKDLIDYSR TGTGPMESLAKFPRRTSG++G      Q  ++  QQQQQQQ V  NSN 
Sbjct: 615 SMKDLIDYSRETGTGPMESLAKFPRRTSGSAGPRG-QAQQHEEQLQQQQQQQMVAHNSNG 673

Query: 395 E-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSP 453
           + +SV+A AMQ+A+SNG+ +VNNS+NPAS S+T STIVGLLHQNSMNSRQQN++NNASSP
Sbjct: 674 DQNSVRAAAMQIASSNGMVSVNNSVNPASTSTTTSTIVGLLHQNSMNSRQQNSMNNASSP 733

Query: 454 YGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPAN 513
           YGGSSVQ+PSPGSS+ +PQ QPN SPFQSPTPSSSNNPPQTSH ALT+ANH S+ +SPAN
Sbjct: 734 YGGSSVQIPSPGSSSTVPQGQPNSSPFQSPTPSSSNNPPQTSHPALTSANHTSTTNSPAN 793

Query: 514 ISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLG 573
           IS+QQ   S   +P       DPSD+QS+VQKI+HEMM+ S +NG      GMVGVGSLG
Sbjct: 794 ISMQQQQSSISGEP-------DPSDAQSSVQKIIHEMMMSSQINGNG----GMVGVGSLG 842

Query: 574 NDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAA 633
           NDVKNV+ I+    NT LNGGNGLVGNG +N+N G+G G YG M  GLGQSAM NGIR A
Sbjct: 843 NDVKNVSGILPVSANTGLNGGNGLVGNGPMNSNSGVGVGNYGTM--GLGQSAMPNGIRTA 900

Query: 634 MGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           M NNS+MNGR GM ++ARDQ+MNHQQDL NQLL+GLGAV GFNNLQFDWKPSP
Sbjct: 901 MVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVGGFNNLQFDWKPSP 953

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457805|ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/689 (77%), Positives = 579/689 (84%), Gaps = 48/689 (6%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQA AAQ++ L QQ+     QQ QQQQLLKA+PQQR QL Q   Q QNLPLRSP 
Sbjct: 270 MSRQSSQATAAQIS-LLQQQRYMQLQQQQQQQLLKAIPQQRSQLQQQQFQAQNLPLRSPV 328

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFW 120
           KP YEPGMCARRLT+YMYQQQH+P                             DNNIEFW
Sbjct: 329 KPGYEPGMCARRLTYYMYQQQHKPT----------------------------DNNIEFW 360

Query: 121 RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 180
           RKFVAEYFAP+AKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF
Sbjct: 361 RKFVAEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 420

Query: 181 KIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 240
           KIKYESGTLEELLYVDMPREYQN+SGQI+LDYAKAIQESVFEQLRVVR+GQLRIVFSPDL
Sbjct: 421 KIKYESGTLEELLYVDMPREYQNSSGQIILDYAKAIQESVFEQLRVVREGQLRIVFSPDL 480

Query: 241 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVA 300
           KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQ+ATQNASSNLS PELQ+NCNMFVA
Sbjct: 481 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSATQNASSNLSVPELQSNCNMFVA 540

Query: 301 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRR 360
           SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR TGTGPMESLAKFPRR
Sbjct: 541 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRNTGTGPMESLAKFPRR 600

Query: 361 TSGASGFHS-PSQQPEDQLQQQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSL 418
           T+ +SGFH+   Q  E   QQQQQQQQT+ QN+N++ SSVQA AMQLA+SNGV +VNNSL
Sbjct: 601 TNASSGFHNQAQQPEEQMQQQQQQQQQTIAQNANNDPSSVQATAMQLASSNGVTSVNNSL 660

Query: 419 NPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPS 478
           NPASAS+++STIVGLLHQNSMNSRQQN++NNA+SPYGG +VQ+PSPGSS++IPQ QPNPS
Sbjct: 661 NPASASTSSSTIVGLLHQNSMNSRQQNSMNNANSPYGGGAVQIPSPGSSSSIPQPQPNPS 720

Query: 479 PFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSD 538
           PFQSPTPSSSNNPPQTSH ALTAA HMS+A+SPANIS+QQP+LSGE         ADPSD
Sbjct: 721 PFQSPTPSSSNNPPQTSHGALTAATHMSTANSPANISMQQPSLSGE---------ADPSD 771

Query: 539 SQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLV 598
           SQS+VQKI+ EMM+ S LNG +    GMV VGSLGNDVKNVN I+ T N+T LNGG    
Sbjct: 772 SQSSVQKIIQEMMMSSQLNGTA----GMVSVGSLGNDVKNVNGILPTSNSTGLNGGLVGN 827

Query: 599 GNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSM-MNGRVGMTAMARDQSMNH 657
           G G  N+ P    GG     GGLGQSAMVNG+RAAMGNNS+ +NGRVGMT M RDQS+NH
Sbjct: 828 GPG--NSTP-GIGGGGFGSMGGLGQSAMVNGMRAAMGNNSLTINGRVGMTPMTRDQSINH 884

Query: 658 QQDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QQDLGNQLL GLGAVNGFNNLQFDWK SP
Sbjct: 885 QQDLGNQLLGGLGAVNGFNNLQFDWKQSP 913

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466018|ref|XP_004150724.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional corepressor SEUSS-like [Cucumis sativus]

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/688 (70%), Positives = 548/688 (79%), Gaps = 50/688 (7%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQ AAAQ+NL+ QQR     Q  Q QQLLK+MP QRPQL Q   QQQNL LRSP 
Sbjct: 265 MSRQSSQVAAAQINLMHQQRI---LQLQQHQQLLKSMPPQRPQL-QQHYQQQNLSLRSPV 320

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFW 120
           KP YEPGMCARRLTHYMY QQHRPE                            DNNI+FW
Sbjct: 321 KPGYEPGMCARRLTHYMYHQQHRPE----------------------------DNNIDFW 352

Query: 121 RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 180
           RKFV EYFAP+AKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLF
Sbjct: 353 RKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLF 412

Query: 181 KIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 240
           KIKYESGT+EELLY+DMPREY NASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL
Sbjct: 413 KIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 472

Query: 241 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVA 300
           KICSWEFCARRHEELIPRRLLIPQVS LGAAAQK+Q+A QN SSNLS PELQNNCNMFVA
Sbjct: 473 KICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKFQSAIQNTSSNLSTPELQNNCNMFVA 532

Query: 301 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRR 360
           SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYS+ TG GPM+SLAKFPRR
Sbjct: 533 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRR 592

Query: 361 TSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAM-QLATSNGVANVNNSLN 419
           TS +SG    + Q     +QQQQQ     +++N++SSVQA+A+ QL  SNGV++VNN+ N
Sbjct: 593 TSSSSGV---TNQAPISDEQQQQQSSIAQRSNNNQSSVQASAVQQLTASNGVSSVNNTAN 649

Query: 420 PASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSP 479
             S S++ASTI GLLHQNSMNSRQQN++ NAS+ YGGSSVQ+PSPGSS+ +P  QPNPS 
Sbjct: 650 QPSTSNSASTIAGLLHQNSMNSRQQNSMPNASNSYGGSSVQIPSPGSSSTVPPTQPNPST 709

Query: 480 FQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDS 539
           FQ PTPSSSN+  Q SH+     N MS+A+SPANIS+QQ          ALSGDADPS++
Sbjct: 710 FQPPTPSSSNSLSQPSHAVAKNPNQMSAANSPANISMQQQP--------ALSGDADPSET 761

Query: 540 QSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVG 599
           QS+VQKIL EMM+ + +NG +     +VGVGS+ ND+KN+N ++ T ++T LN GN + G
Sbjct: 762 QSSVQKILQEMMMNNQMNGPN----SLVGVGSVVNDMKNMNGVLPT-SSTGLNNGNCIGG 816

Query: 600 NGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQ- 658
           NG  N   G+G GGYG+MG GLGQ  MVNG+R AMGNN++MN R+GM ++A +QSMN Q 
Sbjct: 817 NGAANGGSGMGGGGYGSMGSGLGQPVMVNGMRTAMGNNTIMNRRIGMASLALEQSMNGQP 876

Query: 659 QDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QD+GNQLL GLGAVNG++NLQFDWKPSP
Sbjct: 877 QDMGNQLLGGLGAVNGYSNLQFDWKPSP 904

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516395|ref|XP_004165232.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional corepressor SEUSS-like [Cucumis sativus]

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/688 (70%), Positives = 547/688 (79%), Gaps = 50/688 (7%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQ AAAQ+NL+ QQR     Q  Q QQLLK+MP QRPQL Q   QQQNL LRSP 
Sbjct: 272 MSRQSSQVAAAQINLMHQQRI---LQLQQHQQLLKSMPPQRPQL-QQHYQQQNLSLRSPV 327

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFW 120
           KP YEPGMCARRLTHYMY QQHRPE                            DNNI+FW
Sbjct: 328 KPGYEPGMCARRLTHYMYHQQHRPE----------------------------DNNIDFW 359

Query: 121 RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLF 180
           RKFV EYFAP+AKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLF
Sbjct: 360 RKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLF 419

Query: 181 KIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDL 240
           KIKYESGT+EELLY+DMPREY NASGQIVLDYAKAIQESVFEQLRVVRDGQLRI FSPDL
Sbjct: 420 KIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIXFSPDL 479

Query: 241 KICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVA 300
           KICSWEFCARRHEELIPRRLLIPQVS LGAAAQK+Q+A QN SSNLS PELQNNCNMFVA
Sbjct: 480 KICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKFQSAIQNTSSNLSTPELQNNCNMFVA 539

Query: 301 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRR 360
           SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYS+ TG GPM+SLAKFPRR
Sbjct: 540 SARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRR 599

Query: 361 TSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAM-QLATSNGVANVNNSLN 419
           TS +SG    + Q     +QQQQQ     +++N++SSVQA+A+ QL  SNGV++VNN+ N
Sbjct: 600 TSSSSGV---TNQAPISDEQQQQQSSIAQRSNNNQSSVQASAVQQLTASNGVSSVNNTAN 656

Query: 420 PASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSP 479
             S S++ASTI GLLHQNSMNSRQQN++ NAS+ YGGSSVQ+PSPGSS+ +P  QPNPS 
Sbjct: 657 QPSTSNSASTIAGLLHQNSMNSRQQNSMPNASNSYGGSSVQIPSPGSSSTVPPTQPNPST 716

Query: 480 FQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDS 539
           FQ PTPSSSN+  Q SH+     N MS+A+SPANIS+QQ          ALSGDADPS++
Sbjct: 717 FQPPTPSSSNSLSQPSHAVAKNPNQMSAANSPANISMQQQP--------ALSGDADPSET 768

Query: 540 QSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVG 599
           QS+VQKIL EMM+ + +NG +     +VGVGS+ ND+KN+N ++ T ++T LN GN + G
Sbjct: 769 QSSVQKILQEMMMNNQMNGPN----SLVGVGSVVNDMKNMNGVLPT-SSTGLNNGNCIGG 823

Query: 600 NGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQ- 658
           NG  N   G+G GGYG+MG GLGQ  MVNG+R AMGNN++MN R+GM ++A +QSMN Q 
Sbjct: 824 NGAANGGSGMGGGGYGSMGSGLGQPVMVNGMRTAMGNNTIMNRRIGMASLALEQSMNGQP 883

Query: 659 QDLGNQLLNGLGAVNGFNNLQFDWKPSP 686
           QD+GNQLL GLGAVNG++NLQFDWKPSP
Sbjct: 884 QDMGNQLLGGLGAVNGYSNLQFDWKPSP 911

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49523817|emb|CAF18249.1| SEU3A protein [Antirrhinum majus]

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/679 (70%), Positives = 542/679 (79%), Gaps = 60/679 (8%)

Query: 15  LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLT 74
           +L QQR L   Q  QQQQL+K+MPQQR  L   F Q QNL  R+P KPVYEPGMCARRLT
Sbjct: 276 ILHQQR-LMQIQHQQQQQLMKSMPQQRSPLQSQF-QSQNLSNRAPVKPVYEPGMCARRLT 333

Query: 75  HYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKK 134
           HYMYQQQ+RPE                            DNNIEFWRKFVAEYFAPNAKK
Sbjct: 334 HYMYQQQNRPE----------------------------DNNIEFWRKFVAEYFAPNAKK 365

Query: 135 KWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLY 194
           KWCVS+YGSGRQ TGVFPQDVWHC IC RKPGRGFEAT EVLPRLFKIKYESGTLEELLY
Sbjct: 366 KWCVSLYGSGRQTTGVFPQDVWHCXICKRKPGRGFEATAEVLPRLFKIKYESGTLEELLY 425

Query: 195 VDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEE 254
           VDMPREYQN+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCA+RHEE
Sbjct: 426 VDMPREYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCAQRHEE 485

Query: 255 LIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLV 314
           LIPRRLLIPQ  QLGAAAQKYQAATQNA S  S  ELQNNCN FVASARQLAKALEVPLV
Sbjct: 486 LIPRRLLIPQXGQLGAAAQKYQAATQNAGSTASVSELQNNCNTFVASARQLAKALEVPLV 545

Query: 315 NDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQP 374
           NDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGPMESLAKFPRRT+ + GF S  Q  
Sbjct: 546 NDLGYTKRYVRCLQISEVVNSMKDLIDYSRHTSTGPMESLAKFPRRTNPSPGFQSQPQ-- 603

Query: 375 EDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLL 434
           + + Q QQQQ QT GQN N+++SVQA AMQLA+SNG+ +VNN++N    +S+A TI GLL
Sbjct: 604 QPEGQLQQQQYQTPGQNPNNDNSVQAAAMQLASSNGMPSVNNTMNSLPTTSSAGTIAGLL 663

Query: 435 HQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQT 494
           HQNSMNSRQQN ++NA+SPYGGSSVQMPSPG S+++PQAQP+PSPFQSPTPSSSNN PQ 
Sbjct: 664 HQNSMNSRQQNPMSNANSPYGGSSVQMPSPGPSSSMPQAQPSPSPFQSPTPSSSNNNPQP 723

Query: 495 SHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCS 554
           +H++L+ A H +S +SP N+S+QQP         ALSGDAD +DSQS+VQKI+H+MM+ S
Sbjct: 724 THNSLSGA-HFNSVTSP-NVSMQQP---------ALSGDADANDSQSSVQKIIHDMMMSS 772

Query: 555 HLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGY 614
            L+GG      M+G+G++G+D+KNVN ++++ NN  +NG N LVGNG  N N  +   G+
Sbjct: 773 QLSGGG-----MMGMGNMGSDMKNVNVMLSSNNNASMNGSNILVGNGMANGN--MSGPGF 825

Query: 615 GNMGGGLGQSAMVNGIRAAMGNNS--MMNGRVGMTAMARDQSMNH--QQDLGNQLLNGLG 670
           G +GGG GQ A+VNGI AA+GNN+   MNGRVGM AMAR+Q+MNH  QQD+GNQLL+GLG
Sbjct: 826 GGIGGGRGQPALVNGIPAALGNNNSLSMNGRVGM-AMAREQTMNHQQQQDMGNQLLSGLG 884

Query: 671 AVNGF---NNLQFDWKPSP 686
           AVNGF   +NL  DWK SP
Sbjct: 885 AVNGFQYPSNL--DWKTSP 901

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	686
TAIR|locus:2029137	877	SEU "seuss" [Arabidopsis thali	0.718	0.562	0.537	1.7e-139
TAIR|locus:2131804	748	SLK1 "SEUSS-like 1" [Arabidops	0.361	0.331	0.545	4e-83
TAIR|locus:504955415	685	SLK3 "SEUSS-like 3" [Arabidops	0.514	0.515	0.433	8.3e-83
TAIR|locus:2174028	816	SLK2 "AT5G62090" [Arabidopsis	0.495	0.416	0.460	1.7e-82
POMBASE|SPBC30B4.03c	391	adn1 "adhesion defective prote	0.290	0.508	0.257	1.1e-05
DICTYBASE|DDB_G0271670	374	DDB_G0271670 [Dictyostelium di	0.309	0.566	0.174	9.1e-05

TAIR|locus:2029137 SEU "seuss" [Arabidopsis thaliana (taxid:3702)]

 Score = 1279 (455.3 bits), Expect = 1.7e-139, Sum P(3) = 1.7e-139
 Identities = 286/532 (53%), Positives = 341/532 (64%)

Query:    42 PQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQH---RPEVRFSHHDESVVSL 98
             PQ   +  QQQ L ++   + + +     R      +QQQ+   RP ++  +  E  +  
Sbjct:   251 PQAQMNIFQQQRL-MQLQQQQLLKSMPQQRPQLPQQFQQQNLPLRPPLKPVY--EPGMGA 307

Query:    99 WCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHC 158
               +T  +   +   +DNNIEFWRKFVAEYFAPNAKK+WCVSMYGSGRQ TGVFPQDVWHC
Sbjct:   308 QRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGSGRQTTGVFPQDVWHC 367

Query:   159 EICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQE 218
             EICNRKPGRGFEAT EVLPRLFKIKYESGTLEELLYVDMPRE QN+SGQIVL+YAKA QE
Sbjct:   368 EICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNSSGQIVLEYAKATQE 427

Query:   219 SVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAA 278
             SVFE LRVVRDGQLRIVFSPDLKI SWEFCARRHEELIPRRLLIPQVSQLG+AAQKYQ A
Sbjct:   428 SVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQVSQLGSAAQKYQQA 487

Query:   279 TQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKD 338
              QNA+++ + PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKD
Sbjct:   488 AQNATTDSALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKD 547

Query:   339 LIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXXNSNSESSV 398
             LIDYSR T TGP+ESLAKFPRRT  +S    PS                       +   
Sbjct:   548 LIDYSRETRTGPIESLAKFPRRTGPSSALPGPSPQQASDQLRQQQQQQQQQQQQQQQQQQ 607

Query:   399 QANAMQLATSNG--------VA--------NVNNSLNPASASSTASTIVGLLHQNSMNSR 442
             Q    Q  + N         VA         VN + N ASAS++ S+I GL+HQNSM  R
Sbjct:   608 QQQQQQTVSQNTNSDQSSRQVALMQGNPSNGVNYAFNAASASTSTSSIAGLIHQNSMKGR 667

Query:   443 QQNTVNNASSPYGGSSVQMPSPGSSNNIPQAXXXXXXXXXXXXXXXXXXXXXXXXALTAA 502
              QN   N  +          SP   N++                             +++
Sbjct:   668 HQNAAYNPPN----------SPYGGNSVQMQSPSSSGTMVPSSSQQQHNLPTFQSPTSSS 717

Query:   503 NHMSSASSPANISVQQPALSGEADPRAL--SGDADPSDSQSAVQKILHEMML 552
             N+    ++P+   +      G  +  A+  +G+ D ++S S+VQKIL+E+++
Sbjct:   718 NN----NNPSQNGIPSVNHMGSTNSPAMQQAGEVDGNES-SSVQKILNEILM 764

GO:0005634 "nucleus" evidence=ISM

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0060090 "binding, bridging" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0003677 "DNA binding" evidence=IDA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

TAIR|locus:2131804 SLK1 "SEUSS-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 710 (255.0 bits), Expect = 4.0e-83, Sum P(3) = 4.0e-83
 Identities = 138/253 (54%), Positives = 187/253 (73%)

Query:   114 DNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGF 169
             +N I +WRKFVAEYF+P AK++ C+S Y S G  A G+FPQ   D+W C++C  K G+GF
Sbjct:   206 ENCITYWRKFVAEYFSPRAKQRLCLSQYESAGHHALGMFPQAAPDMWQCDLCGTKSGKGF 265

Query:   170 EATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRD 229
             EAT +VL RL +IK+ SG ++ELLY+D PRE +  +G ++L+Y KA+QE+V EQ RVVR+
Sbjct:   266 EATFDVLARLIEIKFASGIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVRE 325

Query:   230 GQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSA 288
             G LRI+FS DLKI SWEFCARRHEEL+ RRL+ PQV+QL   AQK Q+  +++ S  +S 
Sbjct:   326 GHLRIIFSQDLKILSWEFCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSEGVSQ 385

Query:   289 PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGT 348
              +LQ+N NM + + RQLAK +E+  +NDLGY KRY+R LQISEVV SMKDL++++     
Sbjct:   386 QDLQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEQKI 445

Query:   349 GPMESLAKFPRRT 361
             GP+E L +   +T
Sbjct:   446 GPIEGLKRLLEQT 458

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:504955415 SLK3 "SEUSS-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 734 (263.4 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
 Identities = 160/369 (43%), Positives = 231/369 (62%)

Query:   114 DNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGF 169
             +N I +WRKFVAEYF+P AK++ C+S Y S G  A G+FPQ   D+W C++C  K G+GF
Sbjct:   178 ENCITYWRKFVAEYFSPRAKQRLCLSQYESVGHHALGMFPQAAPDMWQCDLCGTKSGKGF 237

Query:   170 EATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRD 229
             EAT +VL RL +IK+ SG ++ELLY+D PRE +  +G ++L+Y KA+QE+V EQ RVVR+
Sbjct:   238 EATFDVLARLIEIKFASGIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVRE 297

Query:   230 GQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSA 288
             G LRI+FSPDLKI SWEFCARRHEEL+ RRL+ PQV+QL   AQK Q+  +++ S  +S 
Sbjct:   298 GHLRIIFSPDLKILSWEFCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSQGVSQ 357

Query:   289 PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGT 348
              ++Q+N NM + + RQLAK +E+  +NDLGY KRY+R LQISEVV SMKDL++++     
Sbjct:   358 QDIQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEHKV 417

Query:   349 GPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXXNSNSESSVQANAMQLATS 408
             GP+E L +   +T+                             + ++ ++ +  M  +T+
Sbjct:   418 GPLEGLKQLLEQTATVK-----LQRQKMQEMEQFGNSGAMSGPAQAQMTLSSGTMSGSTA 472

Query:   409 NGVANVNNSLNPASA-SSTASTIVGLLHQNSMNSRQQNTVNNASSPYG---GSSVQMPSP 464
             N  +N ++ +    A + +      L +  SM  RQ N +NN +S  G   G S Q P+ 
Sbjct:   473 NNNSNNHHQIVGRGAMNGSPQATAALTNYQSMLIRQ-NAMNNQNSNTGNQEGFSSQNPTL 531

Query:   465 GSSNNIPQA 473
              +SN  P +
Sbjct:   532 -NSNQSPSS 539

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2174028 SLK2 "AT5G62090" [Arabidopsis thaliana (taxid:3702)]

 Score = 760 (272.6 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
 Identities = 169/367 (46%), Positives = 230/367 (62%)

Query:   114 DNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGF 169
             +++I +WRKFV EYF+P AKK+WC+S Y + G  A GV PQ   D W C++C  K GRGF
Sbjct:   309 ESSIVYWRKFVTEYFSPRAKKRWCLSHYDNVGHSALGVSPQAATDEWQCDLCGSKSGRGF 368

Query:   170 EATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRD 229
             EAT +VLPRL +IK+ SG L+ELLY+ +P E +  SG +VL+Y KA+QESV+E +RVVR+
Sbjct:   369 EATFDVLPRLNEIKFASGVLDELLYLGVPSERRYGSGIMVLEYGKAVQESVYEHIRVVRE 428

Query:   230 GQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAAT-QNASSNLSA 288
             G LRI+FS +LKI SWEFC RRHEEL+PRRL+ PQV+QL   A+K Q+   Q+ S  +  
Sbjct:   429 GHLRIIFSQELKILSWEFCTRRHEELLPRRLVAPQVNQLLQVAEKCQSTIDQSGSDGIHQ 488

Query:   289 PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGT 348
              +LQ N NM +A+ RQLAK+LE   +NDLG++KRYVRCLQISEVV+SMKD+ID+ R    
Sbjct:   489 QDLQANSNMVMAAGRQLAKSLESHSLNDLGFSKRYVRCLQISEVVSSMKDMIDFCRDQKV 548

Query:   349 GPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXXNS-NSESSVQANAMQLAT 407
             GP+E+L  +P R         P                    NS N   +++ + + +  
Sbjct:   549 GPIEALKSYPYRMKAGK----PQMQEMEQLAAARGLPPDR--NSLNKLMALRNSGINIPM 602

Query:   408 SNGVANVNNSLNPASASSTASTIVG----LLHQNSMNSRQQNTV-------NNASSP-YG 455
             +N   +   SL P SA + A  +      L+ QN +NS   NT        N ++SP Y 
Sbjct:   603 NN--MSGQGSL-PGSAQAAAFALTNYQSMLMKQNHLNSDLNNTTIQQEPSRNRSASPSYQ 659

Query:   456 GSSVQMP 462
             G+S  +P
Sbjct:   660 GTSPLLP 666

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

POMBASE|SPBC30B4.03c adn1 "adhesion defective protein, predicted transcriptional regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 135 (52.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 55/214 (25%), Positives = 103/214 (48%)

Query:   149 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYV-DMPREYQNASGQ 207
             G F  ++ + +  N++P + FE +   LPR   + Y  G L+++ ++    +E+   +  
Sbjct:    58 GTFRYNIDYKDSPNQEP-KLFELSYAALPRFLYLSY-CGKLKKMSFLLGNTKEFAIPNNG 115

Query:   208 IVLDYAKA-IQESVFEQLRVVRDGQLRIVF--SPDLKICSWEFCARRHEELIPRRLLIPQ 264
               ++ ++A I       ++V+  G LR  F  +P LK+ S EF A  H E + R L+   
Sbjct:   116 YFVESSRASILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-N 174

Query:   265 VSQLGAAAQKYQAATQNASSNLSAPELQN-NCNMFVASARQLAKALEVPLVNDLGYTKRY 323
              S   + ++  Q   Q+       P  ++ N N    S+  L    + P VN+ G     
Sbjct:   175 ASLALSQSRPPQNQIQHDGVKSEDPSSESVNIN----SSSSLLP--DSP-VNEYGLEPHI 227

Query:   324 VRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKF 357
             +R ++I+E ++ M+DLI ++    +GP  +L KF
Sbjct:   228 MRFMEITETISGMRDLIAFTLAQRSGPTSALHKF 261

GO:0003712 "transcription cofactor activity" evidence=ISM

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISM

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IMP

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

DICTYBASE|DDB_G0271670 DDB_G0271670 [Dictyostelium discoideum (taxid:44689)]

 Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 37/212 (17%), Positives = 87/212 (41%)

Query:   331 EVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXX 390
             E  N M ++ D    +    +++ +     +S +S   S S                   
Sbjct:    43 EKTNKMAEVGDLGVASFLNILDTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 102

Query:   391 NSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNA 450
             +S+S SS  +++   ++S+  ++ ++S + +S+SS++S+       +S +S   ++ +++
Sbjct:   103 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 162

Query:   451 SSPYGGSSVQMPSPGSSNNIPQAXXXXXXXXXXXXXXXXXXXXXXXXALTAANHMSSASS 510
             SS    SS    S  SS++   +                        + ++++  SS+SS
Sbjct:   163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 222

Query:   511 PANISVQQPALSGEADPRALSGDADPSDSQSA 542
              ++ S    + S  +   + S  +  S S S+
Sbjct:   223 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.128   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      686       527   0.00091  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  303 KB (2156 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.51u 0.12s 45.63t   Elapsed:  00:00:02
  Total cpu time:  45.51u 0.12s 45.63t   Elapsed:  00:00:02
  Start:  Tue May 21 16:36:00 2013   End:  Tue May 21 16:36:02 2013

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W234	SEUSS_ARATH	No assigned EC number	0.6323	0.8134	0.6362	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00020683 hypothetical protein (919 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	686
pfam01803	230	pfam01803, LIM_bind, LIM-domain binding protein	1e-71
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	7e-04
PHA00370	297	PHA00370, III, attachment protein	0.002
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	0.003

>gnl|CDD|216712 pfam01803, LIM_bind, LIM-domain binding protein

 Score =  231 bits (591), Expect = 1e-71
 Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 34/246 (13%)

Query: 113 QDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEAT 172
           +D++I +W++FV E+F+P+A  ++ +S                          G+ FE T
Sbjct: 17  EDDDISYWQRFVHEFFSPDAVLRYSLSSEDGPE--------------------GKQFEIT 56

Query: 173 VEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQ-LRVVRDGQ 231
              LPR F+  +ESG  E  L +D  RE    +G I ++  KA     ++   +VV +G 
Sbjct: 57  TPALPRYFRTIFESGVKELQLVLDGAREQVLPNGSIFVECPKASFIYWYDDGSQVVTEGT 116

Query: 232 LRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPEL 291
           LR  F PDLKI  W+FC R HEE IPR +L P  S L   +++             +PEL
Sbjct: 117 LRAHFDPDLKIEWWDFCTRSHEEYIPRSVLEPLASPLHTKSKQ------------QSPEL 164

Query: 292 QNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVT-GTGP 350
             N  +      Q   +L    V   G  K  +R L+I+E+++ M+DL+ +S+      P
Sbjct: 165 SKNSQLRQQKGPQPITSLPSSNVTRFGLPKAVMRFLEIAEILSPMQDLMSFSKANPILSP 224

Query: 351 MESLAK 356
            E+L +
Sbjct: 225 REALKQ 230

The LIM-domain binding protein, binds to the LIM domain pfam00412 of LIM homeodomain proteins which are transcriptional regulators of development. Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development. The Drosophila protein Chip is required for segmentation and activity of a remote wing margin enhancer. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions. Length = 230

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 42.0 bits (99), Expect = 7e-04
 Identities = 34/191 (17%), Positives = 48/191 (25%), Gaps = 18/191 (9%)

Query: 367 FHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASST 426
                Q P  Q  Q          N+ + S         A   G A       P      
Sbjct: 63  PQPLPQPPPTQALQALPAGDQQQHNTPTGSPAANPPATFALPAGPAGPTIQTEPGQLYPV 122

Query: 427 ASTIVGLLHQNSMNSR-----QQNTVNNASSPYG-GSSVQMPSPGSSNN----IPQAQPN 476
              ++    QN  NS      QQ  +      YG  +S Q+PS   S          Q  
Sbjct: 123 QVPVMV--TQNPANSPLDQPAQQRALQQLQQRYGAPASGQLPSQQQSAQKNDESQLQQQP 180

Query: 477 PSPFQ-----SPTPSSSNNPPQTSHSALTAANHMSSASSP-ANISVQQPALSGEADPRAL 530
                           S    +   +  T    +  A    A   ++QP    ++  R  
Sbjct: 181 NGETPPQQTDGAGDDESEALVRLREADGTLEQRIKGAEGGGAMKVLKQPKKQAKSSKRRT 240

Query: 531 SGDADPSDSQS 541
               D  DS  
Sbjct: 241 IAQIDGIDSDD 251

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|164795 PHA00370, III, attachment protein

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 558 GGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNM 617
           GG+G GG   G  + G +    +     G +T  +GG G  G G+   + G      G  
Sbjct: 87  GGTGEGGSDTGGDTGGGNTGGGS----GGGDTGGSGGGGSDGGGSEGGSTGKSLTKEGVG 142

Query: 618 GGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGF 675
            G      M N  + A+  ++  N    +   A +Q       + + +   +  V G 
Sbjct: 143 AGDFDYPKMANANKDALTEDNDQN---ALQKDADEQLDKASASVSDAISGFMRGVGGL 197

Length = 297

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 40.6 bits (95), Expect = 0.003
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 455 GGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANI 514
           G SS  M S  +S ++  ++P  S F S +P S+   P+ S    +A    +SASS A  
Sbjct: 1   GRSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSA---SASASSSATS 57

Query: 515 SVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGN 574
           S      +G      LS  A                       GG GGGGG  G G  G 
Sbjct: 58  SSASLVANG--AVALLSASAISGGGGGG-----------GGGFGGFGGGGGGGGGGGGGW 104

Query: 575 D 575
            
Sbjct: 105 R 105

Length = 796

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	686
PF01803	240	LIM_bind: LIM-domain binding protein; InterPro: IP	100.0
KOG2181	415	consensus LIM domain binding protein LDB1/NLI/CLIM	100.0

>PF01803 LIM_bind: LIM-domain binding protein; InterPro: IPR002691 The LIM-domain binding protein, binds to the LIM domain IPR001781 from INTERPRO of LIM homeodomain proteins which are transcriptional regulators of development

Probab=100.00  E-value=7.3e-64  Score=501.41  Aligned_cols=236  Identities=36%  Similarity=0.611  Sum_probs=219.7

Q ss_pred             HHHHHHHHHhhcC-ccccccCCccchhhhhhhheeeccccccccCCCHHHHHHHHHHhcCCCCceeEEeeecCCCCCccc
Q 005633           71 RRLTHYMYQQQHR-PEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATG  149 (686)
Q Consensus        71 ~rl~~y~~~q~~r-p~~~~~~~~~~~~~~~~~~~~~c~~~v~kq~ndIeYWqkFV~EFFSP~AvlR~~~s~~~~~~~~tG  149 (686)
                      .||++|+++...| ++                            ++|++||++||+|||+|+|++|||++.+++.     
T Consensus         2 lRl~~~~~~l~~~~~~----------------------------~~~~~yW~~fv~~fF~~~a~lr~~~~~~~~~-----   48 (240)
T PF01803_consen    2 LRLLEFIERLSNFSPN----------------------------LNDIEYWQKFVHEFFSPDAVLRISLWNEDGN-----   48 (240)
T ss_pred             chHHHHHHHHHhhcCC----------------------------CCcHHHHHHHHHHHcCCCeeEEEEEEcCCCC-----
Confidence            5999999999998 77                            9999999999999999999999998875521     


Q ss_pred             cCccccccccccCCCCCceeeEcccchhHHHHHHhhcCcceEEEeecCCcceecCCCeEEEEeCceEEEEEec-CeEEEE
Q 005633          150 VFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFE-QLRVVR  228 (686)
Q Consensus       150 vfpqdlW~cd~c~tk~~KqFEItt~vLPRfF~t~FeSGV~~iqLvLd~pRE~vLsNGsI~LEc~KAs~iy~Ye-gS~Vv~  228 (686)
                                    ..+|+|||++++|||||+++|++||++++|+++++||++++||+|+|||+||+++|||+ |++|++
T Consensus        49 --------------~~~k~FEi~~~~lPR~f~~~~~sGv~~~~~~l~~~~e~~l~ng~i~ie~~~~~~~~~y~~gs~v~~  114 (240)
T PF01803_consen   49 --------------GSPKQFEITRPLLPRYFRTLFESGVKRMQLVLDGPREQVLPNGSIFIECPRATFIYWYEDGSQVVH  114 (240)
T ss_pred             --------------CCCeeEEEchHHHHHHHHHHhcCCceEEEEEecCCceEEcCCCeEEEEECCEEEEEEECCceEEEE
Confidence                          12599999999999999999999999999999999999999999999999999999997 699999


Q ss_pred             eeEEEEEeCCCcceeEEEEeecceeeccccchhhhHHhhhhhHHHHHHHHhhcCCCCCCchHhhhhhhhhHHHHHHHHHh
Q 005633          229 DGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKA  308 (686)
Q Consensus       229 ~GqLRiiFdpdLKIE~wEF~~~sHEEyIpRs~L~~qv~~L~~~akk~qs~~qN~sd~ksspElsKN~n~fl~a~rQLas~  308 (686)
                      +|+||++||++|||||||||+++|+|||+|++|++++.+.+.++++|++..   ++.|.++|+.|+++.+..+.+++.+.
T Consensus       115 ~G~lr~~f~~~lKIe~~df~~~~~~e~I~r~~l~~~~~~~~~~~~~~~~~~---~~~k~~~~~~~~~~~~~~~~~~~~~~  191 (240)
T PF01803_consen  115 EGQLRAQFDPDLKIEWWDFCTRSHEEYIPRSALEQQASNLHPSVQIFQKLS---PDQKQSPDMSKNSKARQQKSPQLPPS  191 (240)
T ss_pred             EeEEEEEECccccEEEEEEEeecccccCcHHHHHHhhccchhhhHHhhhcc---cccccccchhhhhhhhhhcccccCCC
Confidence            999999999999999999999999999999999999999999999999884   55789999999988877777788877


Q ss_pred             ccCCcccCCCccccchhhhhHHHHHhchHHHHHHhhhcC-CChHHHHhh
Q 005633          309 LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTG-TGPMESLAK  356 (686)
Q Consensus       309 le~p~Vn~~GIpk~vMR~LQIsEVMSqMKdLM~FSk~n~-lSPiEALk~  356 (686)
                      |+.++|+++|+++++||||||+|||++|+|||.|++.++ +||+|||++
T Consensus       192 Lp~~~v~~~Gi~~~~mr~Lqi~evms~M~~Lm~fs~~~~~~sP~eaL~~  240 (240)
T PF01803_consen  192 LPSSNVNEFGIPERVMRCLQIAEVMSQMKDLMSFSKQNNILSPLEALEQ  240 (240)
T ss_pred             cccCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHhcC
Confidence            888899999999999999999999999999999999655 999999985

Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) P70662 from SWISSPROT is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons []. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development []. The Drosophila melanogaster protein Chip O18353 from SWISSPROT is required for segmentation and activity of a remote wing margin enhancer []. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development []. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions [].; GO: 0003712 transcription cofactor activity, 0005634 nucleus

>KOG2181 consensus LIM domain binding protein LDB1/NLI/CLIM [Transcription]

Probab=100.00  E-value=7.5e-35  Score=300.03  Aligned_cols=225  Identities=20%  Similarity=0.380  Sum_probs=185.0

Q ss_pred             CCCCcchHHHHHHHHHHHhhcCccccccCCccchhhhhhhheeeccccccccCCCHHHHHHHHHHhcCCCCceeEEeeec
Q 005633           62 PVYEPGMCARRLTHYMYQQQHRPEVRFSHHDESVVSLWCITIVICNSRVFVQDNNIEFWRKFVAEYFAPNAKKKWCVSMY  141 (686)
Q Consensus        62 ~~~~~g~c~~rl~~y~~~q~~rp~~~~~~~~~~~~~~~~~~~~~c~~~v~kq~ndIeYWqkFV~EFFSP~AvlR~~~s~~  141 (686)
                      .++|+|  -+|...|+-|.-+|.-              |+  --|+ +...+.+|..||+.|..|||.++|+|+|.|++.
T Consensus        34 ~~~~pg--~~rh~~y~s~~e~Ri~--------------em--NkRL-q~~se~sdN~WWDaFstEFFeDDa~Lt~~fclE   94 (415)
T KOG2181|consen   34 QATEPG--FQRHGNYVSPLEFRIH--------------EM--NKRL-QIFSEVSDNQWWDAFSTEFFEDDAKLTFVFCLE   94 (415)
T ss_pred             ccCCCc--ccccCCCcCcchhhHH--------------HH--HHHH-HHhcccchhhhHHhhhhhhhcCCceEEEEEEec
Confidence            456776  4566666665555443              11  1111 223468888999999999999999999999885


Q ss_pred             CCCCCccccCccccccccccCCCCCceeeEcccchhHHHHHHhhcCcceEEEeecCCcceecCCCeEEEEeCceEEEEEe
Q 005633          142 GSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVF  221 (686)
Q Consensus       142 ~~~~~~tGvfpqdlW~cd~c~tk~~KqFEItt~vLPRfF~t~FeSGV~~iqLvLd~pRE~vLsNGsI~LEc~KAs~iy~Y  221 (686)
                      +                      ++|.|.|++.+|||||+++||+||++++++|.+++| .+.||++.+||+.|++++.|
T Consensus        95 d----------------------gpkRYtIgRtlIPrfFrsIfegG~~eLyyvLkh~ke-t~hn~s~~~dcdq~~~iTqh  151 (415)
T KOG2181|consen   95 D----------------------GPKRYTIGRTLIPRFFRSIFEGGMRELYYVLKHPKE-TLHNGSQAYDCDQVLQITQH  151 (415)
T ss_pred             C----------------------CcceeeeccchhHHHHHHHHhcchhhhhhhhcCchh-hhcCCceeeeccceeEEeec
Confidence            4                      479999999999999999999999999999999988 69999999999999999999


Q ss_pred             cC---eEEEEeeEEEEEeC--CCcceeEEEEeecceeeccccchhhhHHhhhhhHHHHHHHHhhcCCCCCCchHhhhhhh
Q 005633          222 EQ---LRVVRDGQLRIVFS--PDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCN  296 (686)
Q Consensus       222 eg---S~Vv~~GqLRiiFd--pdLKIE~wEF~~~sHEEyIpRs~L~~qv~~L~~~akk~qs~~qN~sd~ksspElsKN~n  296 (686)
                      +.   .+|+.+|+|.++|.  .-+||+.|+|.+++|.|+|+|+.|...+.                .|....        
T Consensus       152 gkp~ft~VctegrL~lEF~fDd~MRIK~Wh~~ik~~rElvprsil~~~a~----------------~dp~~l--------  207 (415)
T KOG2181|consen  152 GKPSFTEVCTEGRLYLEFAFDDVMRIKAWHLEIKRSRELVPRSILQNTAD----------------YDPEAL--------  207 (415)
T ss_pred             CCccceeeeccceEEEEeehhhhhhhhheeeeeeccccccchhhhhccCC----------------CChhhh--------
Confidence            85   99999999999974  45999999999999999999998764210                011111        


Q ss_pred             hhHHHHHHHHHhccCCcccCCCccccchhhhhHHHHHhchHHHHHHhhhcCCChHHHHhhhhhccCC
Q 005633          297 MFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSG  363 (686)
Q Consensus       297 ~fl~a~rQLas~le~p~Vn~~GIpk~vMR~LQIsEVMSqMKdLM~FSk~n~lSPiEALk~fv~~~~~  363 (686)
                            +|+.|     ++++.|+++.++.+|++|.|+++|++||+.+|.+.|+|+||||..+.+.-.
T Consensus       208 ------dq~~k-----NitR~G~~nsTlNylrlcvILePMQelMSrhKayalsPRdclKttLFQkwQ  263 (415)
T KOG2181|consen  208 ------DQEQK-----NITRMGFFNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQ  263 (415)
T ss_pred             ------Chhhc-----cccccccchhhHHHHHHHHHHhHHHHHHHhccccCCCHHHHHHHHHHHHhh
Confidence                  22222     389999999999999999999999999999999999999999999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	686
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
3syj_A	1011	Adhesion and penetration protein autotransporter;	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 34/317 (10%), Positives = 81/317 (25%), Gaps = 108/317 (34%)

Query: 111 FVQD--NNIEFWRK------------FVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVW 156
            ++D     + W+              +     P   +K    M+        VFP    
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSL-NVLEPAEYRK----MF----DRLSVFPPSAH 386

Query: 157 HCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAI 216
              I              +L               L++ D+ +                 
Sbjct: 387 ---I-----------PTILL--------------SLIWFDVIKS---------------D 403

Query: 217 QESVFEQLR----VVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAA 272
              V  +L     V +  +   +  P + +   E   +   E    R ++          
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYL---ELKVKLENEYALHRSIV---------- 450

Query: 273 QKYQAATQNASSNLSAPELQNNCNMFVA----SARQLAKALEVPLV-NDLGYTKRYVR-- 325
             Y       S +L  P L       +     +     +     +V  D  + ++ +R  
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHD 510

Query: 326 ---CLQISEVVNSMKDLIDYSR-VTGTGP-----MESLAKFPRRTSGASGFHSPS----- 371
                    ++N+++ L  Y   +    P     + ++  F  +    +   S       
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPK-IEENLICSKYTDLLR 569

Query: 372 ---QQPEDQLQQQQQQQ 385
                 ++ + ++  +Q
Sbjct: 570 IALMAEDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 4e-05
 Identities = 47/321 (14%), Positives = 91/321 (28%), Gaps = 110/321 (34%)

Query: 75  HYM----YQQQHRPEVRFSHHDESVVS-LWCITI------VICNSRV---FVQDNNIE-- 118
           H+M     + Q++ +   S  +++ V    C  +      ++    +    +  + +   
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 119 ---FW----------RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKP 165
              FW          +KFV E    N         Y         F       E   R+P
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRIN---------YK--------FLMSPIKTE--QRQP 105

Query: 166 GRGFEATVEVLPRLFK-----IKY------ESGTLEELLYVDMPREY-----QNASGQIV 209
                  +E   RL+       KY          L + L    P +         SG+  
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 210 LDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLG 269
           +    A+         V    +++     D KI  W      +    P  +L        
Sbjct: 166 V----ALD--------VCLSYKVQCKM--DFKI-FWLNLKNCNS---PETVLEML----- 202

Query: 270 AAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQI 329
                     Q     +  P   +  +   ++ +    +++  L   L  +K Y  CL +
Sbjct: 203 ----------QKLLYQID-PNWTSRSD-HSSNIKLRIHSIQAEL-RRLLKSKPYENCLLV 249

Query: 330 ------SEVVNSM----KDLI 340
                 ++  N+     K L+
Sbjct: 250 LLNVQNAKAWNAFNLSCKILL 270

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 4e-04
 Identities = 32/218 (14%), Positives = 68/218 (31%), Gaps = 24/218 (11%)

Query: 200 EYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP-DLKICSWEFCARRHEELIPR 258
           E+Q     I+  +  A  ++ F+  + V+D   + + S  ++          +       
Sbjct: 13  EHQYQYKDILSVFEDAFVDN-FD-CKDVQD-MPKSILSKEEID----HIIMSKDAVSGTL 65

Query: 259 RLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLG 318
           RL    +S+     QK+       +       ++          R   +  +  L ND  
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYNDNQ 124

Query: 319 -YTKRYV-RCLQISEVVNSMKDLIDYSRVT-----GTG----PMESLAKFPRRTSGASGF 367
            + K  V R     ++  ++ +L     V      G+G     ++    +  +       
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 368 H----SPSQQPEDQLQQQQQQQQTVGQNSNSESSVQAN 401
                     PE  L+  Q+    +  N  S S   +N
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 7e-04
 Identities = 41/228 (17%), Positives = 65/228 (28%), Gaps = 70/228 (30%)

Query: 13  MNLLQQQRYLQLQQQ------HQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAK---PV 63
           +N L +   ++ Q +            LK   +    L +  V   N+P    +    P 
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467

Query: 64  YEPGMCARRLTHYMYQQQHRPEVRFSHH------DESVVSLWCITIVICNSRVFVQDNNI 117
           Y           Y Y   H       HH       E +              VF+    +
Sbjct: 468 YLDQ--------YFY--SH-----IGHHLKNIEHPERMTLF---------RMVFLDFRFL 503

Query: 118 EFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFP--QDV--WHCEICNRKPGRGFEATV 173
           E  +K   +  A NA                 +    Q +  +   IC+  P   +E  V
Sbjct: 504 E--QKIRHDSTAWNAS--------------GSILNTLQQLKFYKPYICDNDP--KYERLV 545

Query: 174 EVLPRLFKIKYESGTLEELL---YVDMPR-EYQNASGQIVLDYAKAIQ 217
             +   F  K E    E L+   Y D+ R         I  +  K +Q
Sbjct: 546 NAILD-FLPKIE----ENLICSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae} Length = 1011

 Score = 42.8 bits (99), Expect = 4e-04
 Identities = 30/326 (9%), Positives = 88/326 (26%), Gaps = 15/326 (4%)

Query: 362 SGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAM---QLATSNGVANVNNSL 418
                ++    + +      +          +    +         +  + G    +   
Sbjct: 534 RKEIAYNGWFGETDKNKHNGRLNLIYKPTTEDRTLLLSGGTNLKGDITQTKGKLFFSGRP 593

Query: 419 NPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPS 478
            P + +        +           +   N +       ++  S   S N+   + N +
Sbjct: 594 TPHAYNHLNKRWSEMEGIPQGEIVWDHDWINRTFKAENFQIKGGSAVVSRNVSSIEGNWT 653

Query: 479 PFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSD 538
              S   +++        + +   +  +  ++   + +    +        ++G  + +D
Sbjct: 654 --VSNNANATFGVVPNQQNTICTRSDWTGLTTCQKVDLTDTKVINSIPKTQINGSINLTD 711

Query: 539 SQSAVQKILHEMMLCSHLNGGS-----GGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNG 593
           + +A  K L ++     L   S          +  +    N    V++    GN  + + 
Sbjct: 712 NATANVKGLAKLNGNVTLTNHSQFTLSNNATQIGNIRLSDNSTATVDNANLNGNVHLTDS 771

Query: 594 GNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQ 653
               + N   ++       G       L  +         + N ++ N  + + +     
Sbjct: 772 AQFSLKNSHFSHQ----IQGDKGTTVTLENATWTMPSDTTLQNLTLNNSTITLNSAYSAS 827

Query: 654 SMNHQQDL-GNQLLNGLGAVNGFNNL 678
           S N  +            A + FN L
Sbjct: 828 SNNTPRRRSLETETTPTSAEHRFNTL 853

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	686
3iot_A	449	Maltose-binding protein, huntingtin fusion protei;	81.87

>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A

Probab=81.87  E-value=0.3  Score=51.11  Aligned_cols=11  Identities=27%  Similarity=0.211  Sum_probs=4.0

Q ss_pred             HHHHHHHHHHH
Q 005633           17 QQQRYLQLQQQ   27 (686)
Q Consensus        17 ~~~~~~~~~~~   27 (686)
                      +||.+.|.|||
T Consensus       380 ~~~~~~~~~~~  390 (449)
T 3iot_A          380 AFESLKSFQQQ  390 (449)
T ss_dssp             HHHHHHHTC--
T ss_pred             HHHHHHhhccc
Confidence            33445544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00