Citrus Sinensis ID: 006157

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
Protein Sequence
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccEEEEcccccccHHHHHcccccEEEEEEEccccEEEcccccEEEEEccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcHHHHHHHHHHccccccHHHcccccccccccccccccccccHHHHHHHccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccEEccccccccccEEEcccHHHHHEEEEEccccEEEEEEEccccccccccccEEEEcccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEccccEcccHHHHHHHHHHHHHHHHHccccccccccccccccHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEcccEEcccccccccccccccccccccHHHccHHHHHcccHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKampqqrpqlpqhfvqqqnlplrspakpvyepgmcarrLTHYMYqqqhrpednniEFWRKFVAEYfapnakkkWCVSmygsgrqatgvfpqdvwhceicnrkpgrgfeaTVEVLPRLFKIKYesgtleellyvdmpreyqnaSGQIVLDYAKAIQESVFEQLRVvrdgqlrivfspdlkicswEFCARRHeeliprrllipqVSQLGAAAQKYQAATQnassnlsapelqnnCNMFVASARQLAKALEvplvndlgytkrYVRCLQISEVVNSMKDLIdysrvtgtgpmeslakfprrtsgasgfhspsqqpedQLQQQQQQQQtvgqnsnsESSVQANAMQLATSNgvanvnnslnpasasstaSTIVGLLHqnsmnsrqqntvnnasspyggssvqmpspgssnnipqaqpnpspfqsptpsssnnppqtshsaltaanhmssasspanisvqqpalsgeadpralsgdadpsdsqSAVQKILHEMMLCshlnggsgggggmvgvgslgndvknvndimatgnntvlnggnglvgngtvnnnpgigtggygnmggglgqSAMVNGIRAAmgnnsmmngRVGMTAMARDQSMNHQQDLGNQLLNglgavngfnnlqfdwkpsp
Flexible Loop (DISEMBL)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQlrvvrdgqlrivfspdlkicSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFnnlqfdwkpsp
Low Complexity Region (SEG)
msrqssqaaaaqmnllqqqrylqlqqqhqqqqllkampqqRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSqqpedqlqqqqqqqqtvgqNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAqpnpspfqsptpsssnnppqtshsALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHlnggsgggggmvgvgslgnDVKNVNDIMAtgnntvlnggnglvgngtvnnnpgigtggygnmggglgQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMnhqqdlgnqllnglgavngFNNLQFDWKPSP
Disordered region (IsUnstruct)
***************************************************************YEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAA*********************NNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVT**************************************************************************************************************************************************************************************************************************************KNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGI*********************************QLLNGLGAVNGFNNLQFDW****
Disordered Region (DISOPRED)
*******************************************************************MCARRLT****************FWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS***************************************************GYTKRYVRCLQISEVVNSMK***************************************************************************************************************************************************************************************************************************************************************************************************************************************LLNGLGAVNGFNNLQFDW****
Disordered Region (DISEMBL)
***********QMNLLQQQRYLQ******************PQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS******************NLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFP******************************************NAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASS**************SNNI************************************************************************VQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Disordered Region (DISPRO)
*******AAAAQMNLLQQQRYLQLQQQH****LLKAMPQQRPQLPQHF*QQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQ****************************LAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTS***********************************************************************************************************************************************************************************AVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	658	2.2.26 [Sep-21-2011]
Q8W234	877	Transcriptional corepress	yes	no	0.848	0.636	0.660	1e-179
O74364	391	Adhesion defective protei	yes	no	0.349	0.588	0.228	2e-08

>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1

 Score =  629 bits (1621), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 411/622 (66%), Positives = 456/622 (73%), Gaps = 64/622 (10%)

Query: 57  RSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSG 116
           R P KPVYEPGM A+RLT YMY+QQHRPEDNNIEFWRKFVAEYFAPNAKK+WCVSMYGSG
Sbjct: 294 RPPLKPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGSG 353

Query: 117 RQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNA 176
           RQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGTLEELLYVDMPRE QN+
Sbjct: 354 RQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNS 413

Query: 177 SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQ 236
           SGQIVL+YAKA QESVFE LRVVRDGQLRIVFSPDLKI SWEFCARRHEELIPRRLLIPQ
Sbjct: 414 SGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQ 473

Query: 237 VSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYV 296
           VSQLG+AAQKYQ A QNA+++ + PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYV
Sbjct: 474 VSQLGSAAQKYQQAAQNATTDSALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYV 533

Query: 297 RCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPS-QQPEDQLQ---- 351
           RCLQISEVVNSMKDLIDYSR T TGP+ESLAKFPRRT  +S    PS QQ  DQL+    
Sbjct: 534 RCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRTGPSSALPGPSPQQASDQLRQQQQ 593

Query: 352 -------------QQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSLNPASASS 397
                        QQQQQQQTV QN+NS+ SS Q   MQ   SNG   VN + N ASAS+
Sbjct: 594 QQQQQQQQQQQQQQQQQQQQTVSQNTNSDQSSRQVALMQGNPSNG---VNYAFNAASAST 650

Query: 398 TASTIVGLLHQNSMNSRQQNTVNN-ASSPYGGSSVQMPSPGSSNNI----PQAQPNPSPF 452
           + S+I GL+HQNSM  R QN   N  +SPYGG+SVQM SP SS  +     Q Q N   F
Sbjct: 651 STSSIAGLIHQNSMKGRHQNAAYNPPNSPYGGNSVQMQSPSSSGTMVPSSSQQQHNLPTF 710

Query: 453 QSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQ 512
           QSPT SS+NN    S + + + NHM S +SPA   +QQ   +GE D           +  
Sbjct: 711 QSPTSSSNNN--NPSQNGIPSVNHMGSTNSPA---MQQ---AGEVD----------GNES 752

Query: 513 SAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGN 572
           S+VQKIL+E+++ +  +  S  GG MVG GS GND K   ++ ++G          L+ N
Sbjct: 753 SSVQKILNEILMNNQAHNNS-SGGSMVGHGSFGNDGKGQANVNSSGV---------LLMN 802

Query: 573 GTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQD 632
           G VNNN     GG G  GGG+GQS   NGI    GNNS+MNGRVGM  M RD   N QQD
Sbjct: 803 GQVNNNNNTNIGGAGGFGGGIGQSMAANGINNINGNNSLMNGRVGM--MVRDP--NGQQD 858

Query: 633 LGNQLLNGLGAVNGFNNLQFDW 654
           LGNQL   LGAVNGFNN  FDW
Sbjct: 859 LGNQL---LGAVNGFNN--FDW 875

DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression.
Arabidopsis thaliana (taxid: 3702)

>sp|O74364|ADN1_SCHPO Adhesion defective protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adn1 PE=3 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 55/285 (19%)

Query: 87  NNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVE 146
           ++I +WR+FV +++                    G F  ++ + +  N++P + FE +  
Sbjct: 41  DDIGYWRRFVHDFYT-----------------EKGTFRYNIDYKDSPNQEP-KLFELSYA 82

Query: 147 VLPRLFKIKYESGTLEELLYV-DMPREYQNASGQIVLDYAKAIQESVFEQ----LRVVRD 201
            LPR   + Y  G L+++ ++    +E+   +    ++ ++A   S+  Q    ++V+  
Sbjct: 83  ALPRFLYLSY-CGKLKKMSFLLGNTKEFAIPNNGYFVESSRA---SILYQYQGGVQVIVS 138

Query: 202 GQLRIVF--SPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLS 259
           G LR  F  +P LK+ S EF A  H E + R L+    S   + ++  Q   Q+      
Sbjct: 139 GHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-NASLALSQSRPPQNQIQHDGVKSE 197

Query: 260 APELQN-NCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVT 318
            P  ++ N N   +             VN+ G     +R ++I+E ++ M+DLI ++   
Sbjct: 198 DPSSESVNINSSSSLLPDSP-------VNEYGLEPHIMRFMEITETISGMRDLIAFTLAQ 250

Query: 319 GTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQN 363
            +GP  +L KF                    LQQQ Q Q++   N
Sbjct: 251 RSGPTSALHKF-----------------ATALQQQHQMQKSTSSN 278

Probable transcriptional regulator involved in cell adhesion.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	658
224062956	919	predicted protein [Populus trichocarpa]	0.892	0.638	0.826	0.0
356509338	911	PREDICTED: transcriptional corepressor S	0.974	0.703	0.798	0.0
255558438	905	Transcriptional corepressor SEUSS, putat	0.969	0.704	0.818	0.0
356552765	915	PREDICTED: transcriptional corepressor S	0.975	0.701	0.763	0.0
356546794	928	PREDICTED: transcriptional corepressor S	0.978	0.693	0.759	0.0
356515969	953	PREDICTED: transcriptional corepressor S	0.925	0.639	0.798	0.0
225457805	913	PREDICTED: transcriptional corepressor S	0.974	0.702	0.813	0.0
449466018	904	PREDICTED: LOW QUALITY PROTEIN: transcri	0.969	0.705	0.731	0.0
449516395	911	PREDICTED: LOW QUALITY PROTEIN: transcri	0.969	0.700	0.730	0.0
49523817	901	SEU3A protein [Antirrhinum majus]	0.940	0.687	0.732	0.0

>gi|224062956|ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|222842673|gb|EEE80220.1| predicted protein [Populus trichocarpa]

 Score =  962 bits (2486), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/606 (82%), Positives = 538/606 (88%), Gaps = 19/606 (3%)

Query: 53  NLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSM 112
           N+PLRSP KPVYEPGMCARRLT+YM+QQQ RPEDNNIEFWRKFVAE+FAP+AKKKWCVSM
Sbjct: 333 NIPLRSPVKPVYEPGMCARRLTNYMHQQQRRPEDNNIEFWRKFVAEFFAPHAKKKWCVSM 392

Query: 113 YGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPRE 172
           YGSGRQ TGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPRE
Sbjct: 393 YGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPRE 452

Query: 173 YQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRL 232
           YQN+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRL
Sbjct: 453 YQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRL 512

Query: 233 LIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYT 292
           LIPQVSQLGAAAQKYQAATQNASSNLS PELQNNCN+FVASARQLAKALEVPLVNDLGYT
Sbjct: 513 LIPQVSQLGAAAQKYQAATQNASSNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYT 572

Query: 293 KRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQ 352
           KRYVRCLQISEVVNSMKDLIDYSR TGTGPMESL+KFPRRT  + GFHS +Q    Q ++
Sbjct: 573 KRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLSKFPRRTGASIGFHSQAQ----QPEE 628

Query: 353 QQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMN 412
           QQQQQQT+  NSNS+ S     MQ+A SNG+A+VNNSLN AS ++ AS IVGL+HQNSMN
Sbjct: 629 QQQQQQTITANSNSDQSSAQATMQIAASNGMASVNNSLNTASTTTYASAIVGLVHQNSMN 688

Query: 413 SRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALT 472
           SRQQN++NNASSPYGG+SVQ+PSPGSS+ IPQAQPNPSPFQSPTPSSSNNPPQ SHSALT
Sbjct: 689 SRQQNSINNASSPYGGNSVQIPSPGSSSTIPQAQPNPSPFQSPTPSSSNNPPQASHSALT 748

Query: 473 AANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGS 532
           A NH+SS +SPANI +QQP LSGE         AD  DSQS+VQK LHEMML S LN   
Sbjct: 749 AVNHISSTNSPANIPLQQPTLSGE---------ADHGDSQSSVQKFLHEMMLTSQLN--- 796

Query: 533 GGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGG 592
            G GGMVGVGSLGN+VKNVN I+ TGNNTVLNGGNGLVGNG VN++ GI  G      GG
Sbjct: 797 -GTGGMVGVGSLGNEVKNVNGILPTGNNTVLNGGNGLVGNGAVNSS-GI-GGAGYGTMGG 853

Query: 593 LGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQF 652
           L QS MVNGIRAAMGNNSMMNGR+GM +M RDQSMNHQQDLGNQLL+GLGAVNGF+NLQF
Sbjct: 854 LAQSVMVNGIRAAMGNNSMMNGRMGMPSMVRDQSMNHQQDLGNQLLSGLGAVNGFSNLQF 913

Query: 653 DWKPSP 658
           DWKPSP
Sbjct: 914 DWKPSP 919

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509338|ref|XP_003523407.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/661 (79%), Positives = 578/661 (87%), Gaps = 20/661 (3%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MS QSSQAAAAQ+NLL+  R LQLQQQHQQQQLLKAMPQQR QL     QQQN+P+RSP 
Sbjct: 268 MSNQSSQAAAAQINLLRHHRLLQLQQQHQQQQLLKAMPQQRSQL-PQQFQQQNMPMRSPV 326

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT 120
           KP YEPGMCARRLTHYMYQQQHRPEDNNI+FWRKFVAEYFAPNAKKKWCVSMYGSGRQ T
Sbjct: 327 KPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTT 386

Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI 180
           GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREY N+SGQI
Sbjct: 387 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQI 446

Query: 181 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 240
           VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL
Sbjct: 447 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 506

Query: 241 GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 300
           G  AQKYQ+ TQNA+ N+S PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ
Sbjct: 507 GTVAQKYQSFTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 566

Query: 301 ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTV 360
           ISEVVNSMKDLIDYSR TGTGPMESLAKFPRRTSG+SG      Q  ++  QQQQQQQ V
Sbjct: 567 ISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGPRG-QAQQHEEQLQQQQQQQMV 625

Query: 361 GQNSNSE-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTV 419
             NSN + +SVQA AMQ+A+SNG+ +VNN++NPAS  ++ STIVGLLHQNSMNSRQ N++
Sbjct: 626 AHNSNGDQNSVQAAAMQIASSNGMVSVNNTVNPASTLTSTSTIVGLLHQNSMNSRQPNSM 685

Query: 420 NNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSS 479
           NNASSPYGGSSVQ+PSPGSS+ +PQAQPN SPFQSPTPSSSNNPPQTSH ALT+ANHMS+
Sbjct: 686 NNASSPYGGSSVQIPSPGSSSTVPQAQPNSSPFQSPTPSSSNNPPQTSHPALTSANHMST 745

Query: 480 ASSPANISV--QQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGG 537
            +SPANIS+  QQP++SGE          DPSD+QS+VQKI+HEMM+ S +NG      G
Sbjct: 746 TNSPANISMQQQQPSISGE---------PDPSDAQSSVQKIIHEMMMSSQINGNG----G 792

Query: 538 MVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSA 597
           MVGVGSLGNDVKNVN I+    NT LNGGNGLVGNGT+N+N G+G G YG M  GLGQSA
Sbjct: 793 MVGVGSLGNDVKNVNGILPVSANTGLNGGNGLVGNGTMNSNSGVGVGNYGTM--GLGQSA 850

Query: 598 MVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPS 657
           M NGIR+AM NNS+MNGR GM ++ARDQ+MNHQQD+ NQLL+GLGAV GF+NLQFDWKPS
Sbjct: 851 MPNGIRSAMVNNSIMNGRGGMASLARDQAMNHQQDMSNQLLSGLGAVGGFSNLQFDWKPS 910

Query: 658 P 658
           P
Sbjct: 911 P 911

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558438|ref|XP_002520244.1| Transcriptional corepressor SEUSS, putative [Ricinus communis] gi|223540463|gb|EEF42030.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/660 (81%), Positives = 585/660 (88%), Gaps = 22/660 (3%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQAAAAQ+NLL QQR   +Q QHQQ Q+LK++P QRPQL     QQQNLPLR P 
Sbjct: 266 MSRQSSQAAAAQINLLHQQR--IIQMQHQQHQILKSIPSQRPQL-SQQFQQQNLPLRPPV 322

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT 120
           KP YEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAP+AKKKWCVSMYGSGRQ T
Sbjct: 323 KPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGSGRQTT 382

Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI 180
           GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQN+SGQI
Sbjct: 383 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQI 442

Query: 181 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 240
           VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL
Sbjct: 443 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 502

Query: 241 GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 300
           GAAAQKYQAATQNASSN+S PELQNNCN+FVASARQLAKALEVPLVNDLGYTKRYVRCLQ
Sbjct: 503 GAAAQKYQAATQNASSNVSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 562

Query: 301 ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTV 360
           ISEVVNSMKDLIDYSR T TGPMESLAKFPRRTS +SG HS S   +   +Q QQQQQT+
Sbjct: 563 ISEVVNSMKDLIDYSRETRTGPMESLAKFPRRTSASSGLHSQS---QQPEEQLQQQQQTM 619

Query: 361 GQNSNSE-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTV 419
            QNSNS+ SS+QA  MQ+A SNGV++VNNS+  ASAS++AS IVGLLHQNSMNSRQQ+++
Sbjct: 620 PQNSNSDQSSIQAGGMQIAASNGVSSVNNSITTASASTSASAIVGLLHQNSMNSRQQSSL 679

Query: 420 NNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSS 479
           NNASSPYGG+SVQ+PSPGSS+ IPQAQPNPSPFQSPTPSSSNNP QTSHSALTAANH+SS
Sbjct: 680 NNASSPYGGNSVQVPSPGSSSTIPQAQPNPSPFQSPTPSSSNNPTQTSHSALTAANHISS 739

Query: 480 ASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMV 539
            +SPAN  +QQP         ALS DAD SDSQS+VQKI+HEMM+ + LN    G GGM 
Sbjct: 740 TNSPANNPLQQP---------ALSSDADHSDSQSSVQKIIHEMMMSNQLN----GTGGMA 786

Query: 540 GVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMV 599
           GVG LGND+KNVN I++T NN V+NGGNGLVGNGTV N+ GIG GG+G MGGGLGQSAM+
Sbjct: 787 GVGPLGNDMKNVNGILSTSNNGVVNGGNGLVGNGTVTNS-GIGGGGFGPMGGGLGQSAMI 845

Query: 600 NGIRAAMGNNSMMNGRVGMTAMARDQSMNH-QQDLGNQLLNGLGAVNGFNNLQFDWKPSP 658
           NGIRA MGNNSM+NGRVGM +M R+ SMNH QQDLGNQLL+GLGAVNGFNNL FDWKPSP
Sbjct: 846 NGIRATMGNNSMLNGRVGMQSMVREPSMNHQQQDLGNQLLSGLGAVNGFNNLPFDWKPSP 905

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552765|ref|XP_003544733.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/665 (76%), Positives = 555/665 (83%), Gaps = 23/665 (3%)

Query: 1   MSRQSSQAAAAQMN--LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRS 58
           MSRQSSQAAAAQMN  L QQ+     Q Q QQQQLLK MPQQR  L Q F QQQN+P+RS
Sbjct: 267 MSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKTMPQQRSPLSQQF-QQQNMPMRS 325

Query: 59  PAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQ 118
           P KP YEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQ
Sbjct: 326 PVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQ 385

Query: 119 ATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASG 178
            TGVFPQDVWHCEICN KPGRGFEAT EVLPRLFKIKYESGTLEELLYVDMPREY N+SG
Sbjct: 386 TTGVFPQDVWHCEICNCKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSG 445

Query: 179 QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS 238
           QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS
Sbjct: 446 QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS 505

Query: 239 QLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRC 298
           QLG  AQKYQA TQNA+ NLS PELQNNCN+FVASARQLAKALEVPLVNDLGYTKRYVRC
Sbjct: 506 QLGVVAQKYQAFTQNATPNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRC 565

Query: 299 LQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPS-QQPEDQLQQQQQQQ 357
           LQISEVVNSMKDLIDYSR T TGPM+SLAKFPRRTSG+SG HS + Q  +   QQ Q  Q
Sbjct: 566 LQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDQLQQQSQPPQ 625

Query: 358 QTVGQNSNSE-SSVQANAMQLATSNGVA--NVNNSLNPASASSTASTIVGLLHQNSMNSR 414
             V   SN + +SVQ  AMQ+A+SNGV   N + +   ASAS+T STIVGLLHQNSMNSR
Sbjct: 626 HMVPHTSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASASNTTSTIVGLLHQNSMNSR 685

Query: 415 QQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAA 474
            QN++NNASSPYGGSSVQ+PSPGSS N+PQAQPN SPFQSPTPSSSNN PQTSH A+T+A
Sbjct: 686 -QNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNQSPFQSPTPSSSNN-PQTSHPAITSA 743

Query: 475 NHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGG 534
           NHM +A+SPANI++QQ   S       L  +ADPSD+QS+VQKI+HEMM+ S +N    G
Sbjct: 744 NHMGTANSPANITLQQQQTS-------LPAEADPSDAQSSVQKIIHEMMISSQMN----G 792

Query: 535 GGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVN-NNPGIGTGGYGNMGGGL 593
            GGM G G LGND+KNVN I+   N+T LN G+GL GNG VN +N G+G GGYG M  GL
Sbjct: 793 PGGMAGTGLLGNDMKNVNGILPGSNSTGLNSGSGLAGNGAVNSSNSGVGVGGYGTM--GL 850

Query: 594 GQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFD 653
           G S M NG+R  MG+NS+MNGR GM ++ARDQ MNHQQDL +QLL+GLG VNGF+NLQFD
Sbjct: 851 GPSGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFD 910

Query: 654 WKPSP 658
           WKPSP
Sbjct: 911 WKPSP 915

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546794|ref|XP_003541807.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/673 (75%), Positives = 562/673 (83%), Gaps = 29/673 (4%)

Query: 1   MSRQSSQAAAAQMN--LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRS 58
           MSRQSSQAAAAQMN  L QQ+     Q Q QQQQLLKAMPQQR QL     QQQN+P+RS
Sbjct: 270 MSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKAMPQQRSQL-PQQFQQQNMPMRS 328

Query: 59  PAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQ 118
           P KP YEPGMCARRLTHYMYQQQHRP+DNNIEFWRKFV+EYFAPNAKKKWCVSMYG+GRQ
Sbjct: 329 PVKPAYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVSEYFAPNAKKKWCVSMYGNGRQ 388

Query: 119 ATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASG 178
            TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGTLEELLYVDMPREY N+SG
Sbjct: 389 TTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSG 448

Query: 179 QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS 238
           QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS
Sbjct: 449 QIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS 508

Query: 239 QLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRC 298
           QLGA AQKYQA TQNA+ NLS PELQNNCNM VASARQLAKALEVPLVNDLGYTKRYVRC
Sbjct: 509 QLGAVAQKYQAITQNATPNLSVPELQNNCNMVVASARQLAKALEVPLVNDLGYTKRYVRC 568

Query: 299 LQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHS----PSQQPEDQLQQQQ 354
           LQISEVVNSMKDLIDYSR TGTGPM+SLAKFPRRTSG+SG HS       Q + Q Q Q 
Sbjct: 569 LQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQGQQSEDQLQQQSQPQL 628

Query: 355 QQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNS 413
             Q  V  +SN + +SVQ  AMQ+A+SNGV +VNNS+N ASAS++ STIVGLLHQNSMNS
Sbjct: 629 PPQHMVPHSSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASTSTSTIVGLLHQNSMNS 688

Query: 414 RQ------QNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTS 467
           RQ      QN++NNASSPYGGSSVQ+ SPGSS N+PQAQPN SPFQSPTPSSS N PQTS
Sbjct: 689 RQNSMNSRQNSMNNASSPYGGSSVQIASPGSSGNMPQAQPNASPFQSPTPSSS-NIPQTS 747

Query: 468 HSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSH 527
           H ALT+ANHM +A+SPANIS+QQ   +      +L  +ADPSD+QS+VQKI+HEMM+ S 
Sbjct: 748 HPALTSANHMGTANSPANISLQQQQQT------SLPAEADPSDAQSSVQKIIHEMMMSSQ 801

Query: 528 LNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGG--NGLVGNGTVNNNPGIGTGG 585
           +N    G GGM G GSLGND+KNVN I+   NNT LN G  +GLVGN  VN+N G+G GG
Sbjct: 802 MN----GPGGMAGAGSLGNDMKNVNGILPGSNNTGLNSGSVSGLVGNVAVNSNSGVGVGG 857

Query: 586 YGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVN 645
           YG +  GLG + M NG+R  MG+NS+MNGR GM ++ARDQ MNHQQDL +QLL+GLG VN
Sbjct: 858 YGTI--GLGPAGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVN 915

Query: 646 GFNNLQFDWKPSP 658
           GF+NLQFDWKPSP
Sbjct: 916 GFSNLQFDWKPSP 928

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515969|ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/625 (79%), Positives = 543/625 (86%), Gaps = 16/625 (2%)

Query: 35  KAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRK 94
           KAMPQQR QL     QQQN+ +RSPAKP YEPGMCARRLTHYMYQQQHRPEDNNIEFWRK
Sbjct: 344 KAMPQQRSQL-PQQFQQQNMSMRSPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRK 402

Query: 95  FVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKI 154
           FVAEYFAPNAKKKWCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKI
Sbjct: 403 FVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKI 462

Query: 155 KYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKI 214
           KYESGTLEELLYVDMPREY N+SGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKI
Sbjct: 463 KYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKI 522

Query: 215 CSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASA 274
           CSWEFCARRHEELIPRRLLIPQVSQLGA AQKYQ+ TQNA+ N+S PELQNNCNMFVASA
Sbjct: 523 CSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSFTQNATPNVSVPELQNNCNMFVASA 582

Query: 275 RQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTS 334
           RQL KALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR TGTGPMESLAKFPRRTS
Sbjct: 583 RQLVKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTS 642

Query: 335 GASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSE-SSVQANAMQLATSNGVANVNNSLNPA 393
           G++G      Q  ++  QQQQQQQ V  NSN + +SV+A AMQ+A+SNG+ +VNNS+NPA
Sbjct: 643 GSAGPRG-QAQQHEEQLQQQQQQQMVAHNSNGDQNSVRAAAMQIASSNGMVSVNNSVNPA 701

Query: 394 SASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQ 453
           S S+T STIVGLLHQNSMNSRQQN++NNASSPYGGSSVQ+PSPGSS+ +PQ QPN SPFQ
Sbjct: 702 STSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPQGQPNSSPFQ 761

Query: 454 SPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALSGEADPRALSGDADPSDSQS 513
           SPTPSSSNNPPQTSH ALT+ANH S+ +SPANIS+QQ   S   +P       DPSD+QS
Sbjct: 762 SPTPSSSNNPPQTSHPALTSANHTSTTNSPANISMQQQQSSISGEP-------DPSDAQS 814

Query: 514 AVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNG 573
           +VQKI+HEMM+ S +NG      GMVGVGSLGNDVKNV+ I+    NT LNGGNGLVGNG
Sbjct: 815 SVQKIIHEMMMSSQINGNG----GMVGVGSLGNDVKNVSGILPVSANTGLNGGNGLVGNG 870

Query: 574 TVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDL 633
            +N+N G+G G YG M  GLGQSAM NGIR AM NNS+MNGR GM ++ARDQ+MNHQQDL
Sbjct: 871 PMNSNSGVGVGNYGTM--GLGQSAMPNGIRTAMVNNSIMNGRGGMASLARDQAMNHQQDL 928

Query: 634 GNQLLNGLGAVNGFNNLQFDWKPSP 658
            NQLL+GLGAV GFNNLQFDWKPSP
Sbjct: 929 SNQLLSGLGAVGGFNNLQFDWKPSP 953

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457805|ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]

 Score =  902 bits (2332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/661 (81%), Positives = 584/661 (88%), Gaps = 20/661 (3%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQA AAQ++LLQQQRY+QLQQQ QQQ L KA+PQQR QL Q   Q QNLPLRSP 
Sbjct: 270 MSRQSSQATAAQISLLQQQRYMQLQQQQQQQLL-KAIPQQRSQLQQQQFQAQNLPLRSPV 328

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT 120
           KP YEPGMCARRLT+YMYQQQH+P DNNIEFWRKFVAEYFAP+AKKKWCVSMYGSGRQ T
Sbjct: 329 KPGYEPGMCARRLTYYMYQQQHKPTDNNIEFWRKFVAEYFAPHAKKKWCVSMYGSGRQTT 388

Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI 180
           GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQN+SGQI
Sbjct: 389 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQI 448

Query: 181 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 240
           +LDYAKAIQESVFEQLRVVR+GQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL
Sbjct: 449 ILDYAKAIQESVFEQLRVVREGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 508

Query: 241 GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 300
           GAAAQKYQ+ATQNASSNLS PELQ+NCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ
Sbjct: 509 GAAAQKYQSATQNASSNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 568

Query: 301 ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHS-PSQQPEDQLQQQQQQQQT 359
           ISEVVNSMKDLIDYSR TGTGPMESLAKFPRRT+ +SGFH+   Q  E   QQQQQQQQT
Sbjct: 569 ISEVVNSMKDLIDYSRNTGTGPMESLAKFPRRTNASSGFHNQAQQPEEQMQQQQQQQQQT 628

Query: 360 VGQNSNSE-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNT 418
           + QN+N++ SSVQA AMQLA+SNGV +VNNSLNPASAS+++STIVGLLHQNSMNSRQQN+
Sbjct: 629 IAQNANNDPSSVQATAMQLASSNGVTSVNNSLNPASASTSSSTIVGLLHQNSMNSRQQNS 688

Query: 419 VNNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMS 478
           +NNA+SPYGG +VQ+PSPGSS++IPQ QPNPSPFQSPTPSSSNNPPQTSH ALTAA HMS
Sbjct: 689 MNNANSPYGGGAVQIPSPGSSSSIPQPQPNPSPFQSPTPSSSNNPPQTSHGALTAATHMS 748

Query: 479 SASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGM 538
           +A+SPANIS+QQP+LSGE         ADPSDSQS+VQKI+ EMM+ S LNG +    GM
Sbjct: 749 TANSPANISMQQPSLSGE---------ADPSDSQSSVQKIIQEMMMSSQLNGTA----GM 795

Query: 539 VGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAM 598
           V VGSLGNDVKNVN I+ T N+T LNGG    G G  N+ P    GG     GGLGQSAM
Sbjct: 796 VSVGSLGNDVKNVNGILPTSNSTGLNGGLVGNGPG--NSTP-GIGGGGFGSMGGLGQSAM 852

Query: 599 VNGIRAAMGNNSM-MNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPS 657
           VNG+RAAMGNNS+ +NGRVGMT M RDQS+NHQQDLGNQLL GLGAVNGFNNLQFDWK S
Sbjct: 853 VNGMRAAMGNNSLTINGRVGMTPMTRDQSINHQQDLGNQLLGGLGAVNGFNNLQFDWKQS 912

Query: 658 P 658
           P
Sbjct: 913 P 913

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466018|ref|XP_004150724.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional corepressor SEUSS-like [Cucumis sativus]

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/660 (73%), Positives = 548/660 (83%), Gaps = 22/660 (3%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQ AAAQ+NL+ QQR LQLQQ  Q     K+MP QRPQL Q   QQQNL LRSP 
Sbjct: 265 MSRQSSQVAAAQINLMHQQRILQLQQHQQLL---KSMPPQRPQL-QQHYQQQNLSLRSPV 320

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT 120
           KP YEPGMCARRLTHYMY QQHRPEDNNI+FWRKFV EYFAP+AKKKWCVSMYGSGRQ T
Sbjct: 321 KPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTT 380

Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI 180
           GVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGT+EELLY+DMPREY NASGQI
Sbjct: 381 GVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQI 440

Query: 181 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 240
           VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVS L
Sbjct: 441 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHL 500

Query: 241 GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 300
           GAAAQK+Q+A QN SSNLS PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ
Sbjct: 501 GAAAQKFQSAIQNTSSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 560

Query: 301 ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTV 360
           ISEVVNSMKDLIDYS+ TG GPM+SLAKFPRRTS +SG    + Q     +QQQQQ    
Sbjct: 561 ISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGV---TNQAPISDEQQQQQSSIA 617

Query: 361 GQNSNSESSVQANAM-QLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTV 419
            +++N++SSVQA+A+ QL  SNGV++VNN+ N  S S++ASTI GLLHQNSMNSRQQN++
Sbjct: 618 QRSNNNQSSVQASAVQQLTASNGVSSVNNTANQPSTSNSASTIAGLLHQNSMNSRQQNSM 677

Query: 420 NNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSS 479
            NAS+ YGGSSVQ+PSPGSS+ +P  QPNPS FQ PTPSSSN+  Q SH+     N MS+
Sbjct: 678 PNASNSYGGSSVQIPSPGSSSTVPPTQPNPSTFQPPTPSSSNSLSQPSHAVAKNPNQMSA 737

Query: 480 ASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMV 539
           A+SPANIS+QQ          ALSGDADPS++QS+VQKIL EMM+ + +NG +     +V
Sbjct: 738 ANSPANISMQQQP--------ALSGDADPSETQSSVQKILQEMMMNNQMNGPN----SLV 785

Query: 540 GVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMV 599
           GVGS+ ND+KN+N ++ T ++T LN GN + GNG  N   G+G GGYG+MG GLGQ  MV
Sbjct: 786 GVGSVVNDMKNMNGVLPT-SSTGLNNGNCIGGNGAANGGSGMGGGGYGSMGSGLGQPVMV 844

Query: 600 NGIRAAMGNNSMMNGRVGMTAMARDQSMNHQ-QDLGNQLLNGLGAVNGFNNLQFDWKPSP 658
           NG+R AMGNN++MN R+GM ++A +QSMN Q QD+GNQLL GLGAVNG++NLQFDWKPSP
Sbjct: 845 NGMRTAMGNNTIMNRRIGMASLALEQSMNGQPQDMGNQLLGGLGAVNGYSNLQFDWKPSP 904

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516395|ref|XP_004165232.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional corepressor SEUSS-like [Cucumis sativus]

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/660 (73%), Positives = 547/660 (82%), Gaps = 22/660 (3%)

Query: 1   MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA 60
           MSRQSSQ AAAQ+NL+ QQR LQLQQ  Q     K+MP QRPQL Q   QQQNL LRSP 
Sbjct: 272 MSRQSSQVAAAQINLMHQQRILQLQQHQQLL---KSMPPQRPQL-QQHYQQQNLSLRSPV 327

Query: 61  KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT 120
           KP YEPGMCARRLTHYMY QQHRPEDNNI+FWRKFV EYFAP+AKKKWCVSMYGSGRQ T
Sbjct: 328 KPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTT 387

Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI 180
           GVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGT+EELLY+DMPREY NASGQI
Sbjct: 388 GVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQI 447

Query: 181 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 240
           VLDYAKAIQESVFEQLRVVRDGQLRI FSPDLKICSWEFCARRHEELIPRRLLIPQVS L
Sbjct: 448 VLDYAKAIQESVFEQLRVVRDGQLRIXFSPDLKICSWEFCARRHEELIPRRLLIPQVSHL 507

Query: 241 GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 300
           GAAAQK+Q+A QN SSNLS PELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ
Sbjct: 508 GAAAQKFQSAIQNTSSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ 567

Query: 301 ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTV 360
           ISEVVNSMKDLIDYS+ TG GPM+SLAKFPRRTS +SG    + Q     +QQQQQ    
Sbjct: 568 ISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGV---TNQAPISDEQQQQQSSIA 624

Query: 361 GQNSNSESSVQANAM-QLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTV 419
            +++N++SSVQA+A+ QL  SNGV++VNN+ N  S S++ASTI GLLHQNSMNSRQQN++
Sbjct: 625 QRSNNNQSSVQASAVQQLTASNGVSSVNNTANQPSTSNSASTIAGLLHQNSMNSRQQNSM 684

Query: 420 NNASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSS 479
            NAS+ YGGSSVQ+PSPGSS+ +P  QPNPS FQ PTPSSSN+  Q SH+     N MS+
Sbjct: 685 PNASNSYGGSSVQIPSPGSSSTVPPTQPNPSTFQPPTPSSSNSLSQPSHAVAKNPNQMSA 744

Query: 480 ASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMV 539
           A+SPANIS+QQ          ALSGDADPS++QS+VQKIL EMM+ + +NG +     +V
Sbjct: 745 ANSPANISMQQQP--------ALSGDADPSETQSSVQKILQEMMMNNQMNGPN----SLV 792

Query: 540 GVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMV 599
           GVGS+ ND+KN+N ++ T ++T LN GN + GNG  N   G+G GGYG+MG GLGQ  MV
Sbjct: 793 GVGSVVNDMKNMNGVLPT-SSTGLNNGNCIGGNGAANGGSGMGGGGYGSMGSGLGQPVMV 851

Query: 600 NGIRAAMGNNSMMNGRVGMTAMARDQSMNHQ-QDLGNQLLNGLGAVNGFNNLQFDWKPSP 658
           NG+R AMGNN++MN R+GM ++A +QSMN Q QD+GNQLL GLGAVNG++NLQFDWKPSP
Sbjct: 852 NGMRTAMGNNTIMNRRIGMASLALEQSMNGQPQDMGNQLLGGLGAVNGYSNLQFDWKPSP 911

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49523817|emb|CAF18249.1| SEU3A protein [Antirrhinum majus]

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/651 (73%), Positives = 542/651 (83%), Gaps = 32/651 (4%)

Query: 15  LLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLT 74
           +L QQR L   Q  QQQQL+K+MPQQR  L   F Q QNL  R+P KPVYEPGMCARRLT
Sbjct: 276 ILHQQR-LMQIQHQQQQQLMKSMPQQRSPLQSQF-QSQNLSNRAPVKPVYEPGMCARRLT 333

Query: 75  HYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICN 134
           HYMYQQQ+RPEDNNIEFWRKFVAEYFAPNAKKKWCVS+YGSGRQ TGVFPQDVWHC IC 
Sbjct: 334 HYMYQQQNRPEDNNIEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTTGVFPQDVWHCXICK 393

Query: 135 RKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFE 194
           RKPGRGFEAT EVLPRLFKIKYESGTLEELLYVDMPREYQN+SGQIVLDYAKAIQESVFE
Sbjct: 394 RKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQIVLDYAKAIQESVFE 453

Query: 195 QLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNA 254
           QLRVVRDGQLRIVFSPDLKICSWEFCA+RHEELIPRRLLIPQ  QLGAAAQKYQAATQNA
Sbjct: 454 QLRVVRDGQLRIVFSPDLKICSWEFCAQRHEELIPRRLLIPQXGQLGAAAQKYQAATQNA 513

Query: 255 SSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDY 314
            S  S  ELQNNCN FVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDY
Sbjct: 514 GSTASVSELQNNCNTFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDY 573

Query: 315 SRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANA 374
           SR T TGPMESLAKFPRRT+ + GF S  Q  + + Q QQQQ QT GQN N+++SVQA A
Sbjct: 574 SRHTSTGPMESLAKFPRRTNPSPGFQSQPQ--QPEGQLQQQQYQTPGQNPNNDNSVQAAA 631

Query: 375 MQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMP 434
           MQLA+SNG+ +VNN++N    +S+A TI GLLHQNSMNSRQQN ++NA+SPYGGSSVQMP
Sbjct: 632 MQLASSNGMPSVNNTMNSLPTTSSAGTIAGLLHQNSMNSRQQNPMSNANSPYGGSSVQMP 691

Query: 435 SPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPALS 494
           SPG S+++PQAQP+PSPFQSPTPSSSNN PQ +H++L+ A H +S +SP N+S+QQP   
Sbjct: 692 SPGPSSSMPQAQPSPSPFQSPTPSSSNNNPQPTHNSLSGA-HFNSVTSP-NVSMQQP--- 746

Query: 495 GEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGNDVKNVNDI 554
                 ALSGDAD +DSQS+VQKI+H+MM+ S L+GG      M+G+G++G+D+KNVN +
Sbjct: 747 ------ALSGDADANDSQSSVQKIIHDMMMSSQLSGGG-----MMGMGNMGSDMKNVNVM 795

Query: 555 MATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVNGIRAAMGNNS--MM 612
           +++ NN  +NG N LVGNG  N N  +   G+G +GGG GQ A+VNGI AA+GNN+   M
Sbjct: 796 LSSNNNASMNGSNILVGNGMANGN--MSGPGFGGIGGGRGQPALVNGIPAALGNNNSLSM 853

Query: 613 NGRVGMTAMARDQSMNH--QQDLGNQLLNGLGAVNGF---NNLQFDWKPSP 658
           NGRVGM AMAR+Q+MNH  QQD+GNQLL+GLGAVNGF   +NL  DWK SP
Sbjct: 854 NGRVGM-AMAREQTMNHQQQQDMGNQLLSGLGAVNGFQYPSNL--DWKTSP 901

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	658
TAIR|locus:2029137	877	SEU "seuss" [Arabidopsis thali	0.711	0.533	0.615	6.2e-157
TAIR|locus:2174028	816	SLK2 "AT5G62090" [Arabidopsis	0.582	0.469	0.454	1.7e-84
TAIR|locus:2131804	748	SLK1 "SEUSS-like 1" [Arabidops	0.440	0.387	0.527	2.2e-84
TAIR|locus:504955415	685	SLK3 "SEUSS-like 3" [Arabidops	0.600	0.576	0.436	4.5e-84
POMBASE|SPBC30B4.03c	391	adn1 "adhesion defective prote	0.302	0.508	0.257	9.1e-06
DICTYBASE|DDB_G0271670	374	DDB_G0271670 [Dictyostelium di	0.322	0.566	0.174	8.4e-05
UNIPROTKB|Q1EQW7	398	ldb2 "LIM domain-binding prote	0.130	0.216	0.271	0.00099

TAIR|locus:2029137 SEU "seuss" [Arabidopsis thaliana (taxid:3702)]

 Score = 1467 (521.5 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
 Identities = 309/502 (61%), Positives = 350/502 (69%)

Query:    41 RPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYF 100
             RPQLPQ F QQQNLPLR P KPVYEPGM A+RLT YMY+QQHRPEDNNIEFWRKFVAEYF
Sbjct:   279 RPQLPQQF-QQQNLPLRPPLKPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYF 337

Query:   101 APNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGT 160
             APNAKK+WCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGT
Sbjct:   338 APNAKKRWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGT 397

Query:   161 LEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFC 220
             LEELLYVDMPRE QN+SGQIVL+YAKA QESVFE LRVVRDGQLRIVFSPDLKI SWEFC
Sbjct:   398 LEELLYVDMPRESQNSSGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFC 457

Query:   221 ARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKA 280
             ARRHEELIPRRLLIPQVSQLG+AAQKYQ A QNA+++ + PELQNNCNMFVASARQLAKA
Sbjct:   458 ARRHEELIPRRLLIPQVSQLGSAAQKYQQAAQNATTDSALPELQNNCNMFVASARQLAKA 517

Query:   281 LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFH 340
             LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGP+ESLAKFPRRT  +S   
Sbjct:   518 LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRTGPSSALP 577

Query:   341 SPSXXXXXXXXXXXXXXXXXXXNSNSESSVQANAMQLATSNG--------VA-------- 384
              PS                       +   Q    Q  + N         VA        
Sbjct:   578 GPSPQQASDQLRQQQQQQQQQQQQQQQQQQQQQQQQTVSQNTNSDQSSRQVALMQGNPSN 637

Query:   385 NVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQ 444
              VN + N ASAS++ S+I GL+HQNSM  R QN   N  +          SP   N++  
Sbjct:   638 GVNYAFNAASASTSTSSIAGLIHQNSMKGRHQNAAYNPPN----------SPYGGNSVQM 687

Query:   445 AXXXXXXXXXXXXXXXXXXXXXXXXALTAANHMSSASSPANISVQQPALSGEADPRAL-- 502
                                        +++N+    ++P+   +      G  +  A+  
Sbjct:   688 QSPSSSGTMVPSSSQQQHNLPTFQSPTSSSNN----NNPSQNGIPSVNHMGSTNSPAMQQ 743

Query:   503 SGDADPSDSQSAVQKILHEMML 524
             +G+ D ++S S+VQKIL+E+++
Sbjct:   744 AGEVDGNES-SSVQKILNEILM 764

GO:0005634 "nucleus" evidence=ISM

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0060090 "binding, bridging" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0003677 "DNA binding" evidence=IDA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

TAIR|locus:2174028 SLK2 "AT5G62090" [Arabidopsis thaliana (taxid:3702)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 187/411 (45%), Positives = 255/411 (62%)

Query:    43 QLPQHFVQQQNLPLRSPAKP-VYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFA 101
             Q  Q  +QQQ + ++    P  YE  +CARRL  Y+Y Q+ RP +++I +WRKFV EYF+
Sbjct:   265 QQQQQQLQQQGMQMQLTGGPRPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFS 324

Query:   102 PNAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYE 157
             P AKK+WC+S Y + G  A GV PQ   D W C++C  K GRGFEAT +VLPRL +IK+ 
Sbjct:   325 PRAKKRWCLSHYDNVGHSALGVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFA 384

Query:   158 SGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSW 217
             SG L+ELLY+ +P E +  SG +VL+Y KA+QESV+E +RVVR+G LRI+FS +LKI SW
Sbjct:   385 SGVLDELLYLGVPSERRYGSGIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSW 444

Query:   218 EFCARRHEELIPRRLLIPQVSQLGAAAQKYQAAT-QNASSNLSAPELQNNCNMFVASARQ 276
             EFC RRHEEL+PRRL+ PQV+QL   A+K Q+   Q+ S  +   +LQ N NM +A+ RQ
Sbjct:   445 EFCTRRHEELLPRRLVAPQVNQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQ 504

Query:   277 LAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGA 336
             LAK+LE   +NDLG++KRYVRCLQISEVV+SMKD+ID+ R    GP+E+L  +P R    
Sbjct:   505 LAKSLESHSLNDLGFSKRYVRCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKAG 564

Query:   337 SGFHSPSXXXXXXXXXXXXXXXXXXXNS-NSESSVQANAMQLATSNGVANVNNSLNPASA 395
                  P                    NS N   +++ + + +  +N   +   SL P SA
Sbjct:   565 K----PQMQEMEQLAAARGLPPDR--NSLNKLMALRNSGINIPMNN--MSGQGSL-PGSA 615

Query:   396 SSTASTIVG----LLHQNSMNSRQQNTV-------NNASSP-YGGSSVQMP 434
              + A  +      L+ QN +NS   NT        N ++SP Y G+S  +P
Sbjct:   616 QAAAFALTNYQSMLMKQNHLNSDLNNTTIQQEPSRNRSASPSYQGTSPLLP 666

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:2131804 SLK1 "SEUSS-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
 Identities = 156/296 (52%), Positives = 210/296 (70%)

Query:    43 QLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAP 102
             QL Q   QQ    +    +P YE G+CAR+L  Y+Y  Q RP +N I +WRKFVAEYF+P
Sbjct:   164 QLRQQLQQQGTQQIPPNVRP-YEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSP 222

Query:   103 NAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYES 158
              AK++ C+S Y S G  A G+FPQ   D+W C++C  K G+GFEAT +VL RL +IK+ S
Sbjct:   223 RAKQRLCLSQYESAGHHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFAS 282

Query:   159 GTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWE 218
             G ++ELLY+D PRE +  +G ++L+Y KA+QE+V EQ RVVR+G LRI+FS DLKI SWE
Sbjct:   283 GIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSQDLKILSWE 342

Query:   219 FCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSAPELQNNCNMFVASARQL 277
             FCARRHEEL+ RRL+ PQV+QL   AQK Q+  +++ S  +S  +LQ+N NM + + RQL
Sbjct:   343 FCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQL 402

Query:   278 AKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRT 333
             AK +E+  +NDLGY KRY+R LQISEVV SMKDL++++     GP+E L +   +T
Sbjct:   403 AKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEQKIGPIEGLKRLLEQT 458

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:504955415 SLK3 "SEUSS-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 817 (292.7 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
 Identities = 180/412 (43%), Positives = 255/412 (61%)

Query:    43 QLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAP 102
             QL Q  +QQQ     SP    YE G+CAR+L  Y+Y  Q RP +N I +WRKFVAEYF+P
Sbjct:   136 QLRQQ-LQQQGTQQISPNVRPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSP 194

Query:   103 NAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYES 158
              AK++ C+S Y S G  A G+FPQ   D+W C++C  K G+GFEAT +VL RL +IK+ S
Sbjct:   195 RAKQRLCLSQYESVGHHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFAS 254

Query:   159 GTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWE 218
             G ++ELLY+D PRE +  +G ++L+Y KA+QE+V EQ RVVR+G LRI+FSPDLKI SWE
Sbjct:   255 GIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSPDLKILSWE 314

Query:   219 FCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSAPELQNNCNMFVASARQL 277
             FCARRHEEL+ RRL+ PQV+QL   AQK Q+  +++ S  +S  ++Q+N NM + + RQL
Sbjct:   315 FCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSQGVSQQDIQSNSNMVLGAGRQL 374

Query:   278 AKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGAS 337
             AK +E+  +NDLGY KRY+R LQISEVV SMKDL++++     GP+E L +   +T+   
Sbjct:   375 AKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEHKVGPLEGLKQLLEQTATVK 434

Query:   338 GFHSPSXXXXXXXXXXXXXXXXXXXNSNSESSVQANAMQLATSNGVANVNNSLNPASA-S 396
                                       + ++ ++ +  M  +T+N  +N ++ +    A +
Sbjct:   435 -----LQRQKMQEMEQFGNSGAMSGPAQAQMTLSSGTMSGSTANNNSNNHHQIVGRGAMN 489

Query:   397 STASTIVGLLHQNSMNSRQQNTVNNASSPYG---GSSVQMPSPGSSNNIPQA 445
              +      L +  SM  RQ N +NN +S  G   G S Q P+  +SN  P +
Sbjct:   490 GSPQATAALTNYQSMLIRQ-NAMNNQNSNTGNQEGFSSQNPTL-NSNQSPSS 539

GO:0005634 "nucleus" evidence=ISM

POMBASE|SPBC30B4.03c adn1 "adhesion defective protein, predicted transcriptional regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 135 (52.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
 Identities = 55/214 (25%), Positives = 103/214 (48%)

Query:   121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYV-DMPREYQNASGQ 179
             G F  ++ + +  N++P + FE +   LPR   + Y  G L+++ ++    +E+   +  
Sbjct:    58 GTFRYNIDYKDSPNQEP-KLFELSYAALPRFLYLSY-CGKLKKMSFLLGNTKEFAIPNNG 115

Query:   180 IVLDYAKA-IQESVFEQLRVVRDGQLRIVF--SPDLKICSWEFCARRHEELIPRRLLIPQ 236
               ++ ++A I       ++V+  G LR  F  +P LK+ S EF A  H E + R L+   
Sbjct:   116 YFVESSRASILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-N 174

Query:   237 VSQLGAAAQKYQAATQNASSNLSAPELQN-NCNMFVASARQLAKALEVPLVNDLGYTKRY 295
              S   + ++  Q   Q+       P  ++ N N    S+  L    + P VN+ G     
Sbjct:   175 ASLALSQSRPPQNQIQHDGVKSEDPSSESVNIN----SSSSLLP--DSP-VNEYGLEPHI 227

Query:   296 VRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKF 329
             +R ++I+E ++ M+DLI ++    +GP  +L KF
Sbjct:   228 MRFMEITETISGMRDLIAFTLAQRSGPTSALHKF 261

GO:0003712 "transcription cofactor activity" evidence=ISM

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISM

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IMP

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

DICTYBASE|DDB_G0271670 DDB_G0271670 [Dictyostelium discoideum (taxid:44689)]

 Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
 Identities = 37/212 (17%), Positives = 87/212 (41%)

Query:   303 EVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXX 362
             E  N M ++ D    +    +++ +     +S +S   S S                   
Sbjct:    43 EKTNKMAEVGDLGVASFLNILDTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 102

Query:   363 NSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNA 422
             +S+S SS  +++   ++S+  ++ ++S + +S+SS++S+       +S +S   ++ +++
Sbjct:   103 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 162

Query:   423 SSPYGGSSVQMPSPGSSNNIPQAXXXXXXXXXXXXXXXXXXXXXXXXALTAANHMSSASS 482
             SS    SS    S  SS++   +                        + ++++  SS+SS
Sbjct:   163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 222

Query:   483 PANISVQQPALSGEADPRALSGDADPSDSQSA 514
              ++ S    + S  +   + S  +  S S S+
Sbjct:   223 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 254

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q1EQW7 ldb2 "LIM domain-binding protein 2" [Xenopus laevis (taxid:8355)]

 Score = 94 (38.1 bits), Expect = 0.00099, Sum P(3) = 0.00099
 Identities = 25/92 (27%), Positives = 47/92 (51%)

Query:   147 VLPRLFKIKYESGTLEELLYV--DMPREYQNASGQIVLDYAKAIQESVFEQL-RVVRDGQ 203
             ++PR F   +E G + +L Y+       Y N+S  +  D    + +       +V  +G+
Sbjct:    84 LIPRYFSTVFEGG-VTDLYYILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVCTEGR 142

Query:   204 LRIVFSPD--LKICSWEFCARRHEELIPRRLL 233
             L + F+ D  ++I +W F  R++ EL+PR +L
Sbjct:   143 LILEFTFDDLMRIKTWHFTIRQYRELLPRSIL 174

GO:0005634 "nucleus" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0030274 "LIM domain binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W234	SEUSS_ARATH	No assigned EC number	0.6607	0.8480	0.6362	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00020683 hypothetical protein (919 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	658
pfam01803	230	pfam01803, LIM_bind, LIM-domain binding protein	1e-76
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	0.001
PHA00370	297	PHA00370, III, attachment protein	0.002
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	0.004

>gnl|CDD|216712 pfam01803, LIM_bind, LIM-domain binding protein

 Score =  244 bits (624), Expect = 1e-76
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 35/261 (13%)

Query: 71  RRLTHYMYQQQH-RPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWH 129
            RL  +     + R ED++I +W++FV E+F+P+A  ++ +S                  
Sbjct: 2   LRLLEFNEHLSNFRGEDDDISYWQRFVHEFFSPDAVLRYSLSSEDGPE------------ 49

Query: 130 CEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQ 189
                   G+ FE T   LPR F+  +ESG  E  L +D  RE    +G I ++  KA  
Sbjct: 50  --------GKQFEITTPALPRYFRTIFESGVKELQLVLDGAREQVLPNGSIFVECPKASF 101

Query: 190 ESVFEQ-LRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQ 248
              ++   +VV +G LR  F PDLKI  W+FC R HEE IPR +L P  S L   +++  
Sbjct: 102 IYWYDDGSQVVTEGTLRAHFDPDLKIEWWDFCTRSHEEYIPRSVLEPLASPLHTKSKQ-- 159

Query: 249 AATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSM 308
                      +PEL  N  +      Q   +L    V   G  K  +R L+I+E+++ M
Sbjct: 160 ----------QSPELSKNSQLRQQKGPQPITSLPSSNVTRFGLPKAVMRFLEIAEILSPM 209

Query: 309 KDLIDYSRVT-GTGPMESLAK 328
           +DL+ +S+      P E+L +
Sbjct: 210 QDLMSFSKANPILSPREALKQ 230

The LIM-domain binding protein, binds to the LIM domain pfam00412 of LIM homeodomain proteins which are transcriptional regulators of development. Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development. The Drosophila protein Chip is required for segmentation and activity of a remote wing margin enhancer. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions. Length = 230

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 34/191 (17%), Positives = 48/191 (25%), Gaps = 18/191 (9%)

Query: 339 FHSPSQQPEDQLQQQQQQQQTVGQNSNSESSVQANAMQLATSNGVANVNNSLNPASASST 398
                Q P  Q  Q          N+ + S         A   G A       P      
Sbjct: 63  PQPLPQPPPTQALQALPAGDQQQHNTPTGSPAANPPATFALPAGPAGPTIQTEPGQLYPV 122

Query: 399 ASTIVGLLHQNSMNSR-----QQNTVNNASSPYG-GSSVQMPSPGSSNN----IPQAQPN 448
              ++    QN  NS      QQ  +      YG  +S Q+PS   S          Q  
Sbjct: 123 QVPVMV--TQNPANSPLDQPAQQRALQQLQQRYGAPASGQLPSQQQSAQKNDESQLQQQP 180

Query: 449 PSPFQ-----SPTPSSSNNPPQTSHSALTAANHMSSASSP-ANISVQQPALSGEADPRAL 502
                           S    +   +  T    +  A    A   ++QP    ++  R  
Sbjct: 181 NGETPPQQTDGAGDDESEALVRLREADGTLEQRIKGAEGGGAMKVLKQPKKQAKSSKRRT 240

Query: 503 SGDADPSDSQS 513
               D  DS  
Sbjct: 241 IAQIDGIDSDD 251

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|164795 PHA00370, III, attachment protein

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 530 GGSGGGGGMVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNM 589
           GG+G GG   G  + G +    +     G +T  +GG G  G G+   + G      G  
Sbjct: 87  GGTGEGGSDTGGDTGGGNTGGGS----GGGDTGGSGGGGSDGGGSEGGSTGKSLTKEGVG 142

Query: 590 GGGLGQSAMVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGF 647
            G      M N  + A+  ++  N    +   A +Q       + + +   +  V G 
Sbjct: 143 AGDFDYPKMANANKDALTEDNDQN---ALQKDADEQLDKASASVSDAISGFMRGVGGL 197

Length = 297

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 40.2 bits (94), Expect = 0.004
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 427 GGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANI 486
           G SS  M S  +S ++  ++P  S F S +P S+   P+ S    +A    +SASS A  
Sbjct: 1   GRSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSA---SASASSSATS 57

Query: 487 SVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVGVGSLGN 546
           S      +G      LS  A                       GG GGGGG  G G  G 
Sbjct: 58  SSASLVANG--AVALLSASAISGGGGGG-----------GGGFGGFGGGGGGGGGGGGGW 104

Query: 547 D 547
            
Sbjct: 105 R 105

Length = 796

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	658
PF01803	240	LIM_bind: LIM-domain binding protein; InterPro: IP	100.0
KOG2181	415	consensus LIM domain binding protein LDB1/NLI/CLIM	100.0

>PF01803 LIM_bind: LIM-domain binding protein; InterPro: IPR002691 The LIM-domain binding protein, binds to the LIM domain IPR001781 from INTERPRO of LIM homeodomain proteins which are transcriptional regulators of development

Probab=100.00  E-value=1.1e-65  Score=514.20  Aligned_cols=237  Identities=36%  Similarity=0.601  Sum_probs=220.8

Q ss_pred             HHHHHHHHHHhcCC-CCCCchHHHHHHHHHhcCCCCceeEEeeccCCCCCccccCccccccccccCCCCCceeeEcccch
Q 006157           70 ARRLTHYMYQQQHR-PEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVL  148 (658)
Q Consensus        70 ~lRL~qfie~Ls~r-p~~ndIeYWqkFV~EFFSP~AvlR~~ls~~~~~~~ttGvfpqdlw~~d~~~tk~~KqFEIt~~vL  148 (658)
                      ++||++|+++|+++ ++++|++||++||+|||+|+|+||||+..+++.                   ..+|+|||++++|
T Consensus         1 ilRl~~~~~~l~~~~~~~~~~~yW~~fv~~fF~~~a~lr~~~~~~~~~-------------------~~~k~FEi~~~~l   61 (240)
T PF01803_consen    1 ILRLLEFIERLSNFSPNLNDIEYWQKFVHEFFSPDAVLRISLWNEDGN-------------------GSPKQFEITRPLL   61 (240)
T ss_pred             CchHHHHHHHHHhhcCCCCcHHHHHHHHHHHcCCCeeEEEEEEcCCCC-------------------CCCeeEEEchHHH
Confidence            48999999999998 899999999999999999999999998754310                   1249999999999


Q ss_pred             hHHHHHHhhcCcceEEEEecCCcceecCCCcEEEEeCceEEEEEec-CeEEEEEeEEEEEeCCCcceeEEEEeecceeec
Q 006157          149 PRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFE-QLRVVRDGQLRIVFSPDLKICSWEFCARRHEEL  227 (658)
Q Consensus       149 PRyF~t~FeSGV~~iqL~Ld~prE~vLsNGsI~lEc~KAs~iy~Ye-gS~Vv~~G~LRa~FdpdLKIE~wEF~t~sHeEy  227 (658)
                      ||||+++|++||++|+|+++++||++++||+|+|||+||+++|||+ |++|+++|+||++||++|||||||||+++|+||
T Consensus        62 PR~f~~~~~sGv~~~~~~l~~~~e~~l~ng~i~ie~~~~~~~~~y~~gs~v~~~G~lr~~f~~~lKIe~~df~~~~~~e~  141 (240)
T PF01803_consen   62 PRYFRTLFESGVKRMQLVLDGPREQVLPNGSIFIECPRATFIYWYEDGSQVVHEGQLRAQFDPDLKIEWWDFCTRSHEEY  141 (240)
T ss_pred             HHHHHHHhcCCceEEEEEecCCceEEcCCCeEEEEECCEEEEEEECCceEEEEEeEEEEEECccccEEEEEEEeeccccc
Confidence            9999999999999999999999999999999999999999999997 699999999999999999999999999999999


Q ss_pred             cccchhhhHHhhhhHHHHHHHHHhhcCCCCCCchHhhhhhhhhHHHHHHHHHhccCCcccCCCccchhhhhhhHHHHHhc
Q 006157          228 IPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNS  307 (658)
Q Consensus       228 IpRs~L~~qvs~l~~~aqk~qs~~qN~sd~ksspElsKn~n~f~~a~rQLas~l~~p~Vn~~GIp~~vMR~LQIsEVMSq  307 (658)
                      |+|++|++++.+.+.++++|++..   ++.|.++|++|+++.+..+.+++.+.|+.++|+++|+|+++||||||+|||++
T Consensus       142 I~r~~l~~~~~~~~~~~~~~~~~~---~~~k~~~~~~~~~~~~~~~~~~~~~~Lp~~~v~~~Gi~~~~mr~Lqi~evms~  218 (240)
T PF01803_consen  142 IPRSALEQQASNLHPSVQIFQKLS---PDQKQSPDMSKNSKARQQKSPQLPPSLPSSNVNEFGIPERVMRCLQIAEVMSQ  218 (240)
T ss_pred             CcHHHHHHhhccchhhhHHhhhcc---cccccccchhhhhhhhhhcccccCCCcccCCCCcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999999874   45778999999998888888888888988999999999999999999999999


Q ss_pred             hHHHHHHhhhc-CCChHHHHhh
Q 006157          308 MKDLIDYSRVT-GTGPMESLAK  328 (658)
Q Consensus       308 MKdLM~FSk~n-~lSP~EALk~  328 (658)
                      |+|||.|++.+ ++||+|||++
T Consensus       219 M~~Lm~fs~~~~~~sP~eaL~~  240 (240)
T PF01803_consen  219 MKDLMSFSKQNNILSPLEALEQ  240 (240)
T ss_pred             HHHHHHHHHHcCCCCHHHHhcC
Confidence            99999999965 5999999985

Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) P70662 from SWISSPROT is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons []. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development []. The Drosophila melanogaster protein Chip O18353 from SWISSPROT is required for segmentation and activity of a remote wing margin enhancer []. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development []. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions [].; GO: 0003712 transcription cofactor activity, 0005634 nucleus

>KOG2181 consensus LIM domain binding protein LDB1/NLI/CLIM [Transcription]

Probab=100.00  E-value=6.4e-35  Score=299.44  Aligned_cols=208  Identities=19%  Similarity=0.370  Sum_probs=182.5

Q ss_pred             HHHHHHHHHHhcCCCCCCchHHHHHHHHHhcCCCCceeEEeeccCCCCCccccCccccccccccCCCCCceeeEcccchh
Q 006157           70 ARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLP  149 (658)
Q Consensus        70 ~lRL~qfie~Ls~rp~~ndIeYWqkFV~EFFSP~AvlR~~ls~~~~~~~ttGvfpqdlw~~d~~~tk~~KqFEIt~~vLP  149 (658)
                      -.|++++-.+|+.+.+.+|..||+.|..|||.++|+|.|.+.+.+                      ++|.|.|++.+||
T Consensus        51 e~Ri~emNkRLq~~se~sdN~WWDaFstEFFeDDa~Lt~~fclEd----------------------gpkRYtIgRtlIP  108 (415)
T KOG2181|consen   51 EFRIHEMNKRLQIFSEVSDNQWWDAFSTEFFEDDAKLTFVFCLED----------------------GPKRYTIGRTLIP  108 (415)
T ss_pred             hhhHHHHHHHHHHhcccchhhhHHhhhhhhhcCCceEEEEEEecC----------------------CcceeeeccchhH
Confidence            468888888888899999999999999999999999988765332                      4799999999999


Q ss_pred             HHHHHHhhcCcceEEEEecCCcceecCCCcEEEEeCceEEEEEecC---eEEEEEeEEEEEeCCC--cceeEEEEeecce
Q 006157          150 RLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQ---LRVVRDGQLRIVFSPD--LKICSWEFCARRH  224 (658)
Q Consensus       150 RyF~t~FeSGV~~iqL~Ld~prE~vLsNGsI~lEc~KAs~iy~Yeg---S~Vv~~G~LRa~Fdpd--LKIE~wEF~t~sH  224 (658)
                      |||+++||+||++++++|.+++| .+.||++.+||+.|++++.|+.   .+|+++|+|.++|..|  +||+.|+|.+++|
T Consensus       109 rfFrsIfegG~~eLyyvLkh~ke-t~hn~s~~~dcdq~~~iTqhgkp~ft~VctegrL~lEF~fDd~MRIK~Wh~~ik~~  187 (415)
T KOG2181|consen  109 RFFRSIFEGGMRELYYVLKHPKE-TLHNGSQAYDCDQVLQITQHGKPSFTEVCTEGRLYLEFAFDDVMRIKAWHLEIKRS  187 (415)
T ss_pred             HHHHHHHhcchhhhhhhhcCchh-hhcCCceeeeccceeEEeecCCccceeeeccceEEEEeehhhhhhhhheeeeeecc
Confidence            99999999999999999999988 5899999999999999999984   9999999999999776  9999999999999


Q ss_pred             eeccccchhhhHHhhhhHHHHHHHHHhhcCCCCCCchHhhhhhhhhHHHHHHHHHhccCCcccCCCccchhhhhhhHHHH
Q 006157          225 EELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEV  304 (658)
Q Consensus       225 eEyIpRs~L~~qvs~l~~~aqk~qs~~qN~sd~ksspElsKn~n~f~~a~rQLas~l~~p~Vn~~GIp~~vMR~LQIsEV  304 (658)
                      .|+|||+.|...+.                .|......++|                   ++++.|+++.++.+|.+|.|
T Consensus       188 rElvprsil~~~a~----------------~dp~~ldq~~k-------------------NitR~G~~nsTlNylrlcvI  232 (415)
T KOG2181|consen  188 RELVPRSILQNTAD----------------YDPEALDQEQK-------------------NITRMGFFNSTLNYLRLCVI  232 (415)
T ss_pred             ccccchhhhhccCC----------------CChhhhChhhc-------------------cccccccchhhHHHHHHHHH
Confidence            99999998764321                01111222233                   48999999999999999999


Q ss_pred             HhchHHHHHHhhhcCCChHHHHhhhhhhcCC
Q 006157          305 VNSMKDLIDYSRVTGTGPMESLAKFPRRTSG  335 (658)
Q Consensus       305 MSqMKdLM~FSk~n~lSP~EALk~yv~~~~~  335 (658)
                      ++.|++||+.+|.+.|+|+||||..+.++-.
T Consensus       233 LePMQelMSrhKayalsPRdclKttLFQkwQ  263 (415)
T KOG2181|consen  233 LEPMQELMSRHKAYALSPRDCLKTTLFQKWQ  263 (415)
T ss_pred             HhHHHHHHHhccccCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999988743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	658
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 2e-07
 Identities = 44/365 (12%), Positives = 93/365 (25%), Gaps = 125/365 (34%)

Query: 33  LLKAMPQQRPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFW 92
           LLK +  +   LP   V   N P R          + A  +         R      + W
Sbjct: 307 LLKYLDCRPQDLP-REVLTTN-PRRL--------SIIAESI---------RDGLATWDNW 347

Query: 93  RK------------FVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRG 140
           +              +     P   +K    M+        VFP       I        
Sbjct: 348 KHVNCDKLTTIIESSL-NVLEPAEYRK----MF----DRLSVFPPSAH---I-------- 387

Query: 141 FEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLR--- 197
                 +L               L++ D+ +                    V  +L    
Sbjct: 388 ---PTILL--------------SLIWFDVIKS---------------DVMVVVNKLHKYS 415

Query: 198 -VVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASS 256
            V +  +   +  P + +   E   +   E    R ++            Y       S 
Sbjct: 416 LVEKQPKESTISIPSIYL---ELKVKLENEYALHRSIV----------DHYNIPKTFDSD 462

Query: 257 NLSAPELQNNCNMFVA----SARQLAKALEVPLV-NDLGYTKRYVR-----CLQISEVVN 306
           +L  P L       +     +     +     +V  D  + ++ +R           ++N
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522

Query: 307 SMKDLIDYSR-VTGTGP-----MESLAKFPRRTSGASGFHSPS--------QQPEDQLQQ 352
           +++ L  Y   +    P     + ++  F  +    +   S             ++ + +
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPK-IEENLICSKYTDLLRIALMAEDEAIFE 581

Query: 353 QQQQQ 357
           +  +Q
Sbjct: 582 EAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 3e-06
 Identities = 50/330 (15%), Positives = 90/330 (27%), Gaps = 114/330 (34%)

Query: 25  QQQHQQQQLLKAMPQQRPQLPQHFVQQ------QNLPLRSPAKPVYEPGMCARRLTHYMY 78
           + Q+Q + +L             FV        Q++P     K +    +    + H + 
Sbjct: 13  EHQYQYKDIL-------SVFEDAFVDNFDCKDVQDMP-----KSI----LSKEEIDH-II 55

Query: 79  QQQHRPEDNNIEFW----------RKFVAEYFAPNAKKKWCVSMYGSGRQATGVFPQDVW 128
             +         FW          +KFV E    N         Y         F     
Sbjct: 56  MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---------YK--------FLMSPI 98

Query: 129 HCEICNRKPGRGFEATVEVLPRLFK-----IKY------ESGTLEELLYVDMPREY---- 173
             E   R+P       +E   RL+       KY          L + L    P +     
Sbjct: 99  KTE--QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 174 -QNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRL 232
               SG+  +    A+         V    +++     D KI  W      +    P  +
Sbjct: 157 GVLGSGKTWV----ALD--------VCLSYKVQCKM--DFKI-FWLNLKNCNS---PETV 198

Query: 233 LIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYT 292
           L                  Q     +  P   +  +   ++ +    +++  L   L  +
Sbjct: 199 LEML---------------QKLLYQID-PNWTSRSD-HSSNIKLRIHSIQAEL-RRLLKS 240

Query: 293 KRYVRCLQI------SEVVNSM----KDLI 312
           K Y  CL +      ++  N+     K L+
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILL 270

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 32/195 (16%)

Query: 13  MNLLQQQRYLQLQQQ------HQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPAK---PV 63
           +N L +   ++ Q +            LK   +    L +  V   N+P    +    P 
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467

Query: 64  YEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQATGVF 123
           Y        + H++   +H   +    F   F+   F    ++K  +    +   A+G  
Sbjct: 468 YLDQYFYSHIGHHLKNIEH--PERMTLFRMVFLDFRF---LEQK--IRHDSTAWNASGSI 520

Query: 124 PQDVWHCE-----ICNRKPGRGFEATVEVLPRLFKIKYESGTLEELL---YVDMPR-EYQ 174
              +   +     IC+  P   +E  V  +   F  K E    E L+   Y D+ R    
Sbjct: 521 LNTLQQLKFYKPYICDNDP--KYERLVNAILD-FLPKIE----ENLICSKYTDLLRIALM 573

Query: 175 NASGQIVLDYAKAIQ 189
                I  +  K +Q
Sbjct: 574 AEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 3e-04
 Identities = 32/218 (14%), Positives = 68/218 (31%), Gaps = 24/218 (11%)

Query: 172 EYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSP-DLKICSWEFCARRHEELIPR 230
           E+Q     I+  +  A  ++ F+  + V+D   + + S  ++          +       
Sbjct: 13  EHQYQYKDILSVFEDAFVDN-FD-CKDVQD-MPKSILSKEEID----HIIMSKDAVSGTL 65

Query: 231 RLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLG 290
           RL    +S+     QK+       +       ++          R   +  +  L ND  
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYNDNQ 124

Query: 291 -YTKRYV-RCLQISEVVNSMKDLIDYSRVT-----GTG----PMESLAKFPRRTSGASGF 339
            + K  V R     ++  ++ +L     V      G+G     ++    +  +       
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 340 H----SPSQQPEDQLQQQQQQQQTVGQNSNSESSVQAN 373
                     PE  L+  Q+    +  N  S S   +N
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00