Citrus Sinensis ID: 006355
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 649 | ||||||
| 224066701 | 1101 | predicted protein [Populus trichocarpa] | 0.995 | 0.586 | 0.803 | 0.0 | |
| 255583344 | 1094 | Exocyst complex component, putative [Ric | 0.947 | 0.562 | 0.797 | 0.0 | |
| 296081171 | 1096 | unnamed protein product [Vitis vinifera] | 0.983 | 0.582 | 0.752 | 0.0 | |
| 359493109 | 1095 | PREDICTED: LOW QUALITY PROTEIN: exocyst | 0.956 | 0.567 | 0.761 | 0.0 | |
| 356535713 | 1085 | PREDICTED: exocyst complex component 2-l | 0.978 | 0.585 | 0.693 | 0.0 | |
| 449443834 | 1089 | PREDICTED: exocyst complex component 2-l | 0.959 | 0.572 | 0.718 | 0.0 | |
| 356576143 | 1087 | PREDICTED: exocyst complex component 2-l | 0.978 | 0.584 | 0.688 | 0.0 | |
| 297839553 | 1089 | hypothetical protein ARALYDRAFT_476843 [ | 0.966 | 0.575 | 0.658 | 0.0 | |
| 110741241 | 698 | hypothetical protein [Arabidopsis thalia | 0.961 | 0.893 | 0.648 | 0.0 | |
| 12322227 | 1085 | unknown protein [Arabidopsis thaliana] | 0.961 | 0.575 | 0.648 | 0.0 |
| >gi|224066701|ref|XP_002302182.1| predicted protein [Populus trichocarpa] gi|222843908|gb|EEE81455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/650 (80%), Positives = 580/650 (89%), Gaps = 4/650 (0%)
Query: 1 METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQP-IDSLPVELSGEEVDAFR 59
METLHNE+ ERA+SDA+W QIQQ+LNQSS D+S+ GNI P +DS PV+LSGEEVDA R
Sbjct: 455 METLHNEMRERALSDAKWRQIQQNLNQSSDVDHSLMMGNIPPPVDSQPVDLSGEEVDALR 514
Query: 60 GRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSI 119
G+YIRRLTAVL HHIPAFWKVALSVFSGKFAKSSQVS+ESN+NAS K+EEKVG+G+YS
Sbjct: 515 GKYIRRLTAVLTHHIPAFWKVALSVFSGKFAKSSQVSAESNVNASATKSEEKVGDGRYSA 574
Query: 120 HSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPP 179
HSLDEVAGMIR TIS YE KVHNTF+DLE+SNIL+SYM DAI+EISKACQAFE KESAPP
Sbjct: 575 HSLDEVAGMIRGTISAYETKVHNTFHDLEESNILQSYMSDAIKEISKACQAFEVKESAPP 634
Query: 180 VAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAF 239
AVM LRTLQAEITKIYI RLCSWM+ T+ ISK+ETWIPVSILERNKSPYTIS+LPLAF
Sbjct: 635 TAVMALRTLQAEITKIYIIRLCSWMRAMTEEISKEETWIPVSILERNKSPYTISFLPLAF 694
Query: 240 RSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASE 299
RS++ S+MDQIS MI SLRSEA +SEDM+A L EIQESVRL+FLN FLDFAGHLE I SE
Sbjct: 695 RSVIASAMDQISQMIQSLRSEAGRSEDMFALLQEIQESVRLAFLNCFLDFAGHLEQIGSE 754
Query: 300 LAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYN 359
LAQNKS+KES HLQNGYS + + S++ GSVVD HQ+LL+V+SNIG+CKDELS EL+N
Sbjct: 755 LAQNKSSKESLHLQNGYSHESEEKLSSNLQGSVVDSHQQLLLVLSNIGFCKDELSYELFN 814
Query: 360 KYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQW 419
KYK IWLQSREKD+EG+DIQDLVMSFSGLEEKVL QYTFAKANLIRTAA +LL+SGVQW
Sbjct: 815 KYKTIWLQSREKDEEGSDIQDLVMSFSGLEEKVLAQYTFAKANLIRTAAMNYLLNSGVQW 874
Query: 420 GAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSN 479
GAAPAVKGVRD AVELLHTLVAVH+EVFAGAKPLLDKTLGILVEGLIDTFLSLF EN+S
Sbjct: 875 GAAPAVKGVRDAAVELLHTLVAVHSEVFAGAKPLLDKTLGILVEGLIDTFLSLFHENKSK 934
Query: 480 NLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGH 539
+L+SLDANGFCQLMLEL+YFETILNPY T DARESLK+LQGVLLEKAT +V EAVENPGH
Sbjct: 935 DLRSLDANGFCQLMLELEYFETILNPYLTPDARESLKSLQGVLLEKATENVTEAVENPGH 994
Query: 540 HRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLD 599
RRPTRGSEDALAD+R QGM VSPDDLIALA+Q SSELLQ+ELERTRINTACF+ES+PLD
Sbjct: 995 QRRPTRGSEDALADDRLQGMAVSPDDLIALAEQCSSELLQSELERTRINTACFIESIPLD 1054
Query: 600 SVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 649
SVPESAK AY +RGSMD S R+Y MDSP RNYR +Q GSP F+RHRRR
Sbjct: 1055 SVPESAKAAYAYRGSMD-SPRSY--MDSPGRNYRGSQAMGSPGFSRHRRR 1101
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583344|ref|XP_002532433.1| Exocyst complex component, putative [Ricinus communis] gi|223527853|gb|EEF29948.1| Exocyst complex component, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|296081171|emb|CBI18197.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359493109|ref|XP_002269025.2| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356535713|ref|XP_003536388.1| PREDICTED: exocyst complex component 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449443834|ref|XP_004139681.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] gi|449503239|ref|XP_004161903.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356576143|ref|XP_003556193.1| PREDICTED: exocyst complex component 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297839553|ref|XP_002887658.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] gi|297333499|gb|EFH63917.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|110741241|dbj|BAF02171.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|12322227|gb|AAG51148.1|AC079283_5 unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 649 | ||||||
| TAIR|locus:2030056 | 1090 | SEC5A "AT1G76850" [Arabidopsis | 0.961 | 0.572 | 0.648 | 9.1e-219 | |
| TAIR|locus:2199552 | 1090 | SEC5B "AT1G21170" [Arabidopsis | 0.966 | 0.575 | 0.657 | 2.2e-217 | |
| UNIPROTKB|G8JLK9 | 519 | EXOC2 "Exocyst complex compone | 0.408 | 0.510 | 0.235 | 5.1e-10 | |
| RGD|619961 | 924 | Exoc2 "exocyst complex compone | 0.400 | 0.281 | 0.25 | 1.8e-09 | |
| UNIPROTKB|O54921 | 924 | Exoc2 "Exocyst complex compone | 0.400 | 0.281 | 0.25 | 1.8e-09 | |
| UNIPROTKB|Q96KP1 | 924 | EXOC2 "Exocyst complex compone | 0.408 | 0.286 | 0.235 | 2.5e-09 | |
| UNIPROTKB|F1RXP8 | 924 | EXOC2 "Uncharacterized protein | 0.382 | 0.268 | 0.264 | 3.4e-09 | |
| MGI|MGI:1913732 | 924 | Exoc2 "exocyst complex compone | 0.412 | 0.290 | 0.246 | 4.8e-09 | |
| UNIPROTKB|E2RCW3 | 924 | EXOC2 "Uncharacterized protein | 0.383 | 0.269 | 0.249 | 2.7e-08 | |
| UNIPROTKB|E1BDW9 | 924 | EXOC2 "Uncharacterized protein | 0.388 | 0.272 | 0.252 | 5.3e-08 |
| TAIR|locus:2030056 SEC5A "AT1G76850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2113 (748.9 bits), Expect = 9.1e-219, P = 9.1e-219
Identities = 424/654 (64%), Positives = 519/654 (79%)
Query: 1 METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCG----NIQPIDSLPVELSGEEVD 56
+E L N+ HE+A+SDA+W QIQQ+ G YS T N +D VE EE+D
Sbjct: 462 VEILRNDTHEKAISDAKWQQIQQN-----GVSYSDTASSNENNAVQVDLQSVEFPSEEID 516
Query: 57 AFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGK 116
+GRYI+RLTAVL+HHIP FWK A+S+FSGKFAKSSQV+ + S NKAEEKV E +
Sbjct: 517 ILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKFAKSSQVT-----DTSANKAEEKVTEAR 571
Query: 117 YSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKES 176
YS HSL+EVAGMIR TISVYE KV++TF D ++S ILR +M DAI E+SKACQAFEAKES
Sbjct: 572 YSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKES 631
Query: 177 APPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLP 236
P AV+ LR +QAEITKIYI RLCSWM+ ST+GISK+ETWIPVSILERN+SPY ISYLP
Sbjct: 632 TPHSAVVALRKIQAEITKIYIQRLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLP 691
Query: 237 LAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHI 296
LAFRS++ S M+Q++LMI S++SEA KSEDM+AQ+ EI SVRL+FLN FLDFA HLE I
Sbjct: 692 LAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQI 751
Query: 297 ASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSE 356
++L+Q+ S +++ +NGYS + E ++ GSV+DPH+RLL+V+SNIGYCKDEL+SE
Sbjct: 752 GADLSQSTSRQDNW--KNGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASE 809
Query: 357 LYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSG 416
LYNK+K WLQSR+K+++ +D+QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG
Sbjct: 810 LYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSG 869
Query: 417 VQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDEN 476
+QWG+AP VKG+RD AVELLHTLVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN
Sbjct: 870 IQWGSAPQVKGIRDAAVELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEEN 929
Query: 477 QSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVEN 536
+S++L+S+DANGFCQLM EL+YFET+L YFT A ESLK+LQG +LE A S++EAVE
Sbjct: 930 RSSDLRSIDANGFCQLMFELEYFETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVET 989
Query: 537 PGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESL 596
PGH+RRPTRGSED ++D++Q +VS DDL+AL +Q S+ELLQ ELERTR+NTACF ES
Sbjct: 990 PGHNRRPTRGSEDTVSDDKQ---SVSADDLLALTKQCSNELLQQELERTRVNTACFAESA 1046
Query: 597 PLDSVPESAKVAYG-FRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 649
PL+S P K Y FRGSMD SPSRNYR +Q +GSP AR RRR
Sbjct: 1047 PLESTPPLPKATYSSFRGSMD----------SPSRNYRGSQSSGSPINARPRRR 1090
|
|
| TAIR|locus:2199552 SEC5B "AT1G21170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G8JLK9 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|619961 Exoc2 "exocyst complex component 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O54921 Exoc2 "Exocyst complex component 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96KP1 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RXP8 EXOC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913732 Exoc2 "exocyst complex component 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RCW3 EXOC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BDW9 EXOC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pm.C_LG_II000319 | hypothetical protein (1101 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 649 | |||
| KOG2347 | 934 | consensus Sec5 subunit of exocyst complex [Intrace | 100.0 | |
| KOG2346 | 636 | consensus Uncharacterized conserved protein [Funct | 97.6 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 97.06 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 95.63 | |
| PF06046 | 566 | Sec6: Exocyst complex component Sec6; InterPro: IP | 94.14 | |
| KOG2176 | 800 | consensus Exocyst complex, subunit SEC15 [Intracel | 89.3 | |
| KOG2033 | 863 | consensus Low density lipoprotein B-like protein [ | 84.44 | |
| PF10474 | 234 | DUF2451: Protein of unknown function C-terminus (D | 84.3 | |
| PF14923 | 450 | CCDC142: Coiled-coil protein 142 | 84.14 |
| >KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-78 Score=680.15 Aligned_cols=517 Identities=44% Similarity=0.632 Sum_probs=452.4
Q ss_pred hchhHHHHHHHhhcccCCccccccCCCCCCCcCCCccCcccchhhHHHHHHHHHHHHHhhcchhHHHHHHHHhcc-eeec
Q 006355 13 MSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSG-KFAK 91 (649)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~fVe~Ls~vl~~~lP~FWkL~~syf~G-~~~~ 91 (649)
++| +|.|.|+++...|+...+..++..+ +.+ +.+-.|-++.+++||+.||+++++|+|+|||+|++||+| +|..
T Consensus 406 ~~~-~~~q~s~~g~~~S~t~s~~~~~~~q-~~~---~~~~~~k~~~r~~fiekL~~l~~s~lP~fWKl~~sy~~G~~~~~ 480 (934)
T KOG2347|consen 406 LSD-KWTQPSQNGVHLSDTASSMENSQNQ-VIN---EWKIREKTPERVNFIEKLTDLLLSQLPIFWKLAISYFNGDLFSP 480 (934)
T ss_pred ccc-cccchhhcccccCchHHHHhhhhhh-hcc---chhhhhhchHHHHHHHHHHHHHHHhCcHHHHHHHHHhcccccCc
Confidence 778 9999999998888877555544433 333 888999999999999999999999999999999999999 5555
Q ss_pred cc-ccCcccccccccchhhhh--hccccccccchhHHHHHHHHhhhhhHHhhhccccchhhhhhchHHHHHHHHHHHHHh
Q 006355 92 SS-QVSSESNLNASGNKAEEK--VGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKAC 168 (649)
Q Consensus 92 ~~-~k~~~~~~~~~~~~~~~~--~~~~~~~s~~l~dfk~mi~~~i~~~~~kv~~~~~~li~a~~L~~yL~~~v~ei~k~~ 168 (649)
.. .+++ ..+|..+. ..++.+..|++...+.|..-+++.++.++...++++--+..+.++|+..++++.++|
T Consensus 481 ~sq~~~s------~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t~s~~~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~~ 554 (934)
T KOG2347|consen 481 SSQVQDS------DINKMEQNNEVREKREVFHSLVELALMDRFTLSQSDGKAKSPFGDADISRSLLPWMPLAIKTVRKAC 554 (934)
T ss_pred ccccChh------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccCCcCCcccccccCccchhHHHHhHHHH
Confidence 55 2332 23455555 667889999999999999999999999999888888888888899999999999999
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc---cccccccccccccCCCCCccccchHHHHHHHHH
Q 006355 169 QAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS---KDETWIPVSILERNKSPYTISYLPLAFRSIMKS 245 (649)
Q Consensus 169 ~~l~~~~~s~~~~l~~LR~L~s~l~~~~V~rLcsw~rdaae~i~---~lEdW~~~~~~er~~s~~~iT~LP~~Fe~~i~~ 245 (649)
+.|..++..| + +.|+.++..+++..++++|+||+.++|.|+ +.|+|.++.+++|+ .++|+||.+||++|++
T Consensus 555 ~sL~ale~~P-~--~~lq~Iq~li~~~rl~~~~~~~~~~~e~is~l~~re~W~~~s~~~rn---~s~t~LP~~fEt~ivs 628 (934)
T KOG2347|consen 555 QSLEALESLP-H--DALQPIQKLITEARLQCLSSWMRASTERISTLAKRETWIPDSILERN---RSITYLPLAFETVIVS 628 (934)
T ss_pred HHHHHhhhCh-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcc---cchhhhhHHHHHHHhh
Confidence 9999999776 4 667777777888888999999999999999 69999999999987 5699999999999999
Q ss_pred HHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCcccc-cc---cccCCCCCCC
Q 006355 246 SMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKES-QH---LQNGYSSDPC 321 (649)
Q Consensus 246 ~mq~i~~~l~s~~~E~~~~~dl~~~~~elq~~V~~~f~~~l~sfl~~L~~LA~~~~~~~~d~~s-~~---~~~~~~~~~~ 321 (649)
+|+++..++++.+||++ +|+ +++++..|...+++.+.+|+-|+++||.+..+...|... +. .++++++...
T Consensus 629 sl~q~~~~~l~~~gEa~----~f~-~~~~~~~i~el~I~~~~~fl~c~e~L~~h~~~~~~~~~q~~t~~~~~~~~~~~~q 703 (934)
T KOG2347|consen 629 SLEQVNSVLLSFEGEAA----LFE-QPDMQAEIEELSISVRLAFLNCFEDLAIHLEQIGADLSQLTTQIEGQNGFSNAHQ 703 (934)
T ss_pred hHHhhhhHHhhcccccc----ccC-chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCchhhcccccccccccccccc
Confidence 99999999998899987 888 699999999999999999999999999964432222211 11 1345666654
Q ss_pred CCcCCCCCCCCCCcCceeeheecchHHHHHhhHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 006355 322 TESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKA 401 (649)
Q Consensus 322 ~~~~~~~~~~~~~~~~RLLltLSNl~ylr~~v~P~L~~~Fe~~f~~~lt~~~~~~~~~tl~~~Ls~Ld~rLFe~Yv~~K~ 401 (649)
..++.++++.+.+||+||||||||++||+...+|+|++.|+.-|...... .+.+...|++|+.+||++|++.|+
T Consensus 704 ed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~~~~~~k~------iE~is~s~s~l~s~l~e~Yi~~k~ 777 (934)
T KOG2347|consen 704 EDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYTWLLSRKN------IEDISMSLSGLGSKLFENYIEDKA 777 (934)
T ss_pred hhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHHhhccccc------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55555555678899999999999999999999999999996655544433 356668999999999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccc-
Q 006355 402 NLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNN- 480 (649)
Q Consensus 402 ~~L~~~Ie~gi~~~~~dW~~~p~P~~VRpYv~E~L~~LV~VHAEV~siap~Ll~rVLs~Lve~la~eLl~~F~~~~~~~- 480 (649)
++|++++|||||+|+|+|+.+|+|+|||||++|+||+||+||||||++||+|+++||..+|++++++|+++|+ |
T Consensus 778 ~~i~~alEp~~~~~~~~W~~~~~~~~irdYa~E~l~~lV~VhaEvf~iap~Ll~kiL~~~ve~i~d~L~~l~~-----~~ 852 (934)
T KOG2347|consen 778 DPIRGALEPYLLDGGIQWGMAPPVKGIRDYAKEALHNLVAVHAEVFAIAPQLLDKILGETVEGISDELLRLFS-----CD 852 (934)
T ss_pred hhhhhcccchhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-----hh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCCcchhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCchhhhhhhcCCCC
Q 006355 481 LKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMT 560 (649)
Q Consensus 481 v~~fs~~G~lQAtLDIefl~~tL~~YlT~~A~~~l~~iy~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (649)
|++||.+|+||+++||+||+++|++|+|++|++.++| |+|...+.+++ ++||+.++...|++++
T Consensus 853 v~s~S~nG~lQi~vdl~~l~~~l~~Ylt~~a~~slkq--------ale~l~~~~~g-----~dtr~lee~ln~~k~s--- 916 (934)
T KOG2347|consen 853 VQSFSANGALQIMVDLEYLEDVLGPYLTKDAKESLKQ--------ALEALSECLSG-----GDTRRLEECLNDDKQS--- 916 (934)
T ss_pred hhccCCCcceeeeeeHHHHHHHHHHhccHHHHHHHHH--------HHHHhhhhccC-----cchhhHHHHHHHhhHH---
Confidence 8999999999999999999999999999999999995 78899999997 5999999999999998
Q ss_pred cChhHHHHHHHHHhHHHHHHHHhhhhhce
Q 006355 561 VSPDDLIALAQQYSSELLQAELERTRINT 589 (649)
Q Consensus 561 ~~~~~~~~~~~~~~~~~l~~~~~~t~~~~ 589 (649)
.+|+.||. +++++||.|+
T Consensus 917 ------m~l~Lqc~-----~a~~~t~~~t 934 (934)
T KOG2347|consen 917 ------MRLQLQCF-----QALEDTRFNT 934 (934)
T ss_pred ------HHHHHHHH-----HHhhhhhcCC
Confidence 68899998 8899999885
|
|
| >KOG2346 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex | Back alignment and domain information |
|---|
| >KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known | Back alignment and domain information |
|---|
| >PF14923 CCDC142: Coiled-coil protein 142 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 649 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 3e-10
Identities = 81/570 (14%), Positives = 167/570 (29%), Gaps = 159/570 (27%)
Query: 120 HSLD-EVAGM---IRNTISVYE--IKVHNTFNDLEDSNILRSYMRDA-IEEISKACQAFE 172
H +D E ++ +SV+E + D++D +S + I+ I + +
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDM--PKSILSKEEIDHIIMS----K 58
Query: 173 AKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTI 232
S L + Q E+ + ++ + + + ++ I + P +
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVE----------EVLRINYKFLMSPIKTEQRQPSMM 108
Query: 233 SYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQ----------------- 275
+ + + R + + + + R + + LLE++
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKY-NVSRLQ--PYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 276 ---ESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSS-DPCTESLSDIPGS 331
+ + +DF ++ + N + LQ DP S SD +
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKN---CNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 332 VVDPHQRLLIVISNIGYCKDELSSELYNK-YKD--IWLQSREKDQEGTDIQDLVMSFSGL 388
+ I + EL L +K Y++ + L ++Q+
Sbjct: 223 ----------IKLRIHSIQAELRRLLKSKPYENCLLVL-----L----NVQN-------- 255
Query: 389 EEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAV-HAEVF 447
K + + + TT V + + L H + + E
Sbjct: 256 -AKAWNAFNLS----CKILLTT--RFKQV----TDFLSAATTTHISLDHHSMTLTPDE-- 302
Query: 448 AGAKPLLDKTLGILVEGL------IDTF-LSLFDE------NQSNNLKSLDANGFCQLML 494
K LL K L + L + LS+ E +N K ++ + +L
Sbjct: 303 --VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD---KLTT 357
Query: 495 ELDYFETILNPY-----------FTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRP 543
++ +L P F A L ++ S V N H
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS-LIWFDVIKSDVMVVVNKLHKYS- 415
Query: 544 TRGSEDALADERQQGMTVS-PDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVP 602
L +++ + T+S P + L + +E L R+ ++
Sbjct: 416 -------LVEKQPKESTISIPSIYLELKVKLENE---YALHRSIVD-------------- 451
Query: 603 ESAKVAYGFRGSMDPSGRNYPAMDSPSRNY 632
Y + D P +D Y
Sbjct: 452 -----HYNIPKTFDSDDLIPPYLD----QY 472
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 649 | |||
| 2a2f_X | 325 | Exocyst complex component SEC15; all helical struc | 97.05 | |
| 2fji_1 | 399 | Exocyst complex component SEC6; exocytosis, tandem | 96.52 | |
| 3fhn_A | 706 | Protein transport protein TIP20; TIP20P, vesicle t | 94.72 | |
| 3n1e_A | 141 | Vacuolar protein sorting-associated protein 54; sp | 88.13 |
| >2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0027 Score=66.98 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhcc-hhhhHHHHHHHHHHHHHH
Q 006355 389 EEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAG-AKPLLDKTLGILVEGLID 467 (649)
Q Consensus 389 d~rLFe~Yv~~K~~~L~~~Ie~gi~~~~~dW~~~p~P~~VRpYv~E~L~~LV~VHAEV~si-ap~Ll~rVLs~Lve~la~ 467 (649)
|.+||+.- ..|.+-+- -...+||.+..+|++.++|+.|++..|=.+=+ .++. .+.+...+.-.....+++
T Consensus 186 e~~I~~~v-~~KIDdfl-------~la~yDW~~~~~~~~ps~yi~dli~fL~~~f~-sl~~LP~~v~~~~~~~a~~his~ 256 (325)
T 2a2f_X 186 EKQVGLRI-CSKIDEFF-------ELSAYDWLLVEPPGIASAFITDMISYLKSTFD-SFAFKLPHIAQAACRRTFEHIAE 256 (325)
T ss_dssp HHHHHHHH-HHHHHHHH-------TTCCTTCC----CCSCCHHHHHHHHHHHHHHH-TTTTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHH-------HhcccCCCCCCCCCCccHHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHH
Confidence 45555543 44544442 22388999999999999999999999888887 5554 445788888888899999
Q ss_pred HHHHhhhhhccccCCCCCcchhHHHHhhHHHHHHhhcc
Q 006355 468 TFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNP 505 (649)
Q Consensus 468 eLl~~F~~~~~~~v~~fs~~G~lQAtLDIefl~~tL~~ 505 (649)
.++..+. ++.|++|+.+|..|..+|+.++++....
T Consensus 257 ~l~~~Ll---~~~vk~in~~av~~~~~Dv~~lE~fa~~ 291 (325)
T 2a2f_X 257 KIYSIMY---DEDVKQISTGALTQINLDLMQCEFFAAS 291 (325)
T ss_dssp HHHHHHT---C------CCTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhc---CcchhhcCHHHHHHHHHHHHHHHHHHHh
Confidence 9998886 3488999999999999999999998844
|
| >2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00