Citrus Sinensis ID: 006355


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------65
METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
cccccHHHHHHHHccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccEEcccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccccccccccccccccccccccccccccccccccEEEHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHcccc
cHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHccHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccEEEEEEHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
METLHNELHERAMSDARWLQIQQDlnqssgadysvtcgniqpidslpvelsgeevDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSgkfakssqvssesnlnasgnkaeekvgegkysiHSLDEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAfeakesapPVAVMVLRTLQAEITKIYIGRLcswmqgstdgiskdetwipvsilernkspytisylPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELaqnksnkesqhlqngyssdpcteslsdipgsvvdphqRLLIVISNIGYCKDELSSELYNKYKDIWLQsrekdqegtdiQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLdsgvqwgaapavkGVRDVAVELLHTLVAVHAEVFagakplldKTLGILVEGLIDTFLSLFdenqsnnlksldaNGFCQLMLELDYFEtilnpyftHDARESLKNLQGVLLEKATVSVAEAvenpghhrrptrgsedALADErqqgmtvspDDLIALAQQYSSELLQAELERTRIntacfveslpldsvpesakvaygfrgsmdpsgrnypamdspsrnyrnaqptgspsfarhrrr
METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNiqpidslpvelSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKssqvssesnlnasgnkaeekvgegkySIHSLDEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSIlernkspytISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEavenpghhrrptrgsedALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFveslpldsvpESAKVAYGfrgsmdpsgrNYPAMdspsrnyrnaqptgspsfarhrrr
METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
*****************WLQI*********ADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF***************************YSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSL********DMYAQLLEIQESVRLSFLNRFLDFAGHLEHIA**********************************VVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQS*******TDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSV***********************************LIALAQQYSSELLQAELERTRINTACFVESLPLD**************************************************
**********RAMSDARWLQ************************************AFRGRYIRRLTAVLIHHIPAFWKVALSVFS****************************GKYSIHSLDEVAGMI***************NDLEDSNILRSYMRDAIEEISKACQAFEA**S***VAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMI******************EIQESVRLSFLNRFLDFAGHLEHI**************************************PHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKA*************************************DDLIALAQQY****************************************************************************
METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF**************************KYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQN********************SLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVE******************ERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSP*********************
METLHNELHERAMSDARWLQIQQD***************************GEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFA***************NKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASE*******************************SVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAV*************************TVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPL***************************************************
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METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query649 2.2.26 [Sep-21-2011]
Q8S3U91090 Exocyst complex component yes no 0.961 0.572 0.648 0.0
Q96KP1924 Exocyst complex component yes no 0.644 0.452 0.218 2e-11
O54921924 Exocyst complex component yes no 0.647 0.454 0.219 9e-11
Q9D4H1924 Exocyst complex component yes no 0.639 0.449 0.221 1e-09
>sp|Q8S3U9|EXOC2_ARATH Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1 Back     alignment and function desciption
 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/654 (64%), Positives = 519/654 (79%), Gaps = 30/654 (4%)

Query: 1    METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTC----GNIQPIDSLPVELSGEEVD 56
            +E L N+ HE+A+SDA+W QIQQ+     G  YS T      N   +D   VE   EE+D
Sbjct: 462  VEILRNDTHEKAISDAKWQQIQQN-----GVSYSDTASSNENNAVQVDLQSVEFPSEEID 516

Query: 57   AFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGK 116
              +GRYI+RLTAVL+HHIP FWK A+S+FSGKFAKSSQV+     + S NKAEEKV E +
Sbjct: 517  ILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKFAKSSQVT-----DTSANKAEEKVTEAR 571

Query: 117  YSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKES 176
            YS HSL+EVAGMIR TISVYE KV++TF D ++S ILR +M DAI E+SKACQAFEAKES
Sbjct: 572  YSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKES 631

Query: 177  APPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLP 236
             P  AV+ LR +QAEITKIYI RLCSWM+ ST+GISK+ETWIPVSILERN+SPY ISYLP
Sbjct: 632  TPHSAVVALRKIQAEITKIYIQRLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLP 691

Query: 237  LAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHI 296
            LAFRS++ S M+Q++LMI S++SEA KSEDM+AQ+ EI  SVRL+FLN FLDFA HLE I
Sbjct: 692  LAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQI 751

Query: 297  ASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSE 356
             ++L+Q+ S ++  + +NGYS +   E  ++  GSV+DPH+RLL+V+SNIGYCKDEL+SE
Sbjct: 752  GADLSQSTSRQD--NWKNGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASE 809

Query: 357  LYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSG 416
            LYNK+K  WLQSR+K+++ +D+QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG
Sbjct: 810  LYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSG 869

Query: 417  VQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDEN 476
            +QWG+AP VKG+RD AVELLHTLVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN
Sbjct: 870  IQWGSAPQVKGIRDAAVELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEEN 929

Query: 477  QSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVEN 536
            +S++L+S+DANGFCQLM EL+YFET+L  YFT  A ESLK+LQG +LE A  S++EAVE 
Sbjct: 930  RSSDLRSIDANGFCQLMFELEYFETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVET 989

Query: 537  PGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESL 596
            PGH+RRPTRGSED ++D++Q   +VS DDL+AL +Q S+ELLQ ELERTR+NTACF ES 
Sbjct: 990  PGHNRRPTRGSEDTVSDDKQ---SVSADDLLALTKQCSNELLQQELERTRVNTACFAESA 1046

Query: 597  PLDSVPESAKVAY-GFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 649
            PL+S P   K  Y  FRGS          MDSPSRNYR +Q +GSP  AR RRR
Sbjct: 1047 PLESTPPLPKATYSSFRGS----------MDSPSRNYRGSQSSGSPINARPRRR 1090




Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q96KP1|EXOC2_HUMAN Exocyst complex component 2 OS=Homo sapiens GN=EXOC2 PE=1 SV=1 Back     alignment and function description
>sp|O54921|EXOC2_RAT Exocyst complex component 2 OS=Rattus norvegicus GN=Exoc2 PE=1 SV=1 Back     alignment and function description
>sp|Q9D4H1|EXOC2_MOUSE Exocyst complex component 2 OS=Mus musculus GN=Exoc2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query649
224066701 1101 predicted protein [Populus trichocarpa] 0.995 0.586 0.803 0.0
255583344 1094 Exocyst complex component, putative [Ric 0.947 0.562 0.797 0.0
296081171 1096 unnamed protein product [Vitis vinifera] 0.983 0.582 0.752 0.0
359493109 1095 PREDICTED: LOW QUALITY PROTEIN: exocyst 0.956 0.567 0.761 0.0
356535713 1085 PREDICTED: exocyst complex component 2-l 0.978 0.585 0.693 0.0
449443834 1089 PREDICTED: exocyst complex component 2-l 0.959 0.572 0.718 0.0
356576143 1087 PREDICTED: exocyst complex component 2-l 0.978 0.584 0.688 0.0
297839553 1089 hypothetical protein ARALYDRAFT_476843 [ 0.966 0.575 0.658 0.0
110741241698 hypothetical protein [Arabidopsis thalia 0.961 0.893 0.648 0.0
12322227 1085 unknown protein [Arabidopsis thaliana] 0.961 0.575 0.648 0.0
>gi|224066701|ref|XP_002302182.1| predicted protein [Populus trichocarpa] gi|222843908|gb|EEE81455.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/650 (80%), Positives = 580/650 (89%), Gaps = 4/650 (0%)

Query: 1    METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQP-IDSLPVELSGEEVDAFR 59
            METLHNE+ ERA+SDA+W QIQQ+LNQSS  D+S+  GNI P +DS PV+LSGEEVDA R
Sbjct: 455  METLHNEMRERALSDAKWRQIQQNLNQSSDVDHSLMMGNIPPPVDSQPVDLSGEEVDALR 514

Query: 60   GRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSI 119
            G+YIRRLTAVL HHIPAFWKVALSVFSGKFAKSSQVS+ESN+NAS  K+EEKVG+G+YS 
Sbjct: 515  GKYIRRLTAVLTHHIPAFWKVALSVFSGKFAKSSQVSAESNVNASATKSEEKVGDGRYSA 574

Query: 120  HSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPP 179
            HSLDEVAGMIR TIS YE KVHNTF+DLE+SNIL+SYM DAI+EISKACQAFE KESAPP
Sbjct: 575  HSLDEVAGMIRGTISAYETKVHNTFHDLEESNILQSYMSDAIKEISKACQAFEVKESAPP 634

Query: 180  VAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAF 239
             AVM LRTLQAEITKIYI RLCSWM+  T+ ISK+ETWIPVSILERNKSPYTIS+LPLAF
Sbjct: 635  TAVMALRTLQAEITKIYIIRLCSWMRAMTEEISKEETWIPVSILERNKSPYTISFLPLAF 694

Query: 240  RSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASE 299
            RS++ S+MDQIS MI SLRSEA +SEDM+A L EIQESVRL+FLN FLDFAGHLE I SE
Sbjct: 695  RSVIASAMDQISQMIQSLRSEAGRSEDMFALLQEIQESVRLAFLNCFLDFAGHLEQIGSE 754

Query: 300  LAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYN 359
            LAQNKS+KES HLQNGYS +   +  S++ GSVVD HQ+LL+V+SNIG+CKDELS EL+N
Sbjct: 755  LAQNKSSKESLHLQNGYSHESEEKLSSNLQGSVVDSHQQLLLVLSNIGFCKDELSYELFN 814

Query: 360  KYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQW 419
            KYK IWLQSREKD+EG+DIQDLVMSFSGLEEKVL QYTFAKANLIRTAA  +LL+SGVQW
Sbjct: 815  KYKTIWLQSREKDEEGSDIQDLVMSFSGLEEKVLAQYTFAKANLIRTAAMNYLLNSGVQW 874

Query: 420  GAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSN 479
            GAAPAVKGVRD AVELLHTLVAVH+EVFAGAKPLLDKTLGILVEGLIDTFLSLF EN+S 
Sbjct: 875  GAAPAVKGVRDAAVELLHTLVAVHSEVFAGAKPLLDKTLGILVEGLIDTFLSLFHENKSK 934

Query: 480  NLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGH 539
            +L+SLDANGFCQLMLEL+YFETILNPY T DARESLK+LQGVLLEKAT +V EAVENPGH
Sbjct: 935  DLRSLDANGFCQLMLELEYFETILNPYLTPDARESLKSLQGVLLEKATENVTEAVENPGH 994

Query: 540  HRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLD 599
             RRPTRGSEDALAD+R QGM VSPDDLIALA+Q SSELLQ+ELERTRINTACF+ES+PLD
Sbjct: 995  QRRPTRGSEDALADDRLQGMAVSPDDLIALAEQCSSELLQSELERTRINTACFIESIPLD 1054

Query: 600  SVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 649
            SVPESAK AY +RGSMD S R+Y  MDSP RNYR +Q  GSP F+RHRRR
Sbjct: 1055 SVPESAKAAYAYRGSMD-SPRSY--MDSPGRNYRGSQAMGSPGFSRHRRR 1101




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583344|ref|XP_002532433.1| Exocyst complex component, putative [Ricinus communis] gi|223527853|gb|EEF29948.1| Exocyst complex component, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296081171|emb|CBI18197.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493109|ref|XP_002269025.2| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535713|ref|XP_003536388.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449443834|ref|XP_004139681.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] gi|449503239|ref|XP_004161903.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576143|ref|XP_003556193.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297839553|ref|XP_002887658.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] gi|297333499|gb|EFH63917.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|110741241|dbj|BAF02171.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12322227|gb|AAG51148.1|AC079283_5 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query649
TAIR|locus:20300561090 SEC5A "AT1G76850" [Arabidopsis 0.961 0.572 0.648 9.1e-219
TAIR|locus:21995521090 SEC5B "AT1G21170" [Arabidopsis 0.966 0.575 0.657 2.2e-217
UNIPROTKB|G8JLK9519 EXOC2 "Exocyst complex compone 0.408 0.510 0.235 5.1e-10
RGD|619961924 Exoc2 "exocyst complex compone 0.400 0.281 0.25 1.8e-09
UNIPROTKB|O54921924 Exoc2 "Exocyst complex compone 0.400 0.281 0.25 1.8e-09
UNIPROTKB|Q96KP1924 EXOC2 "Exocyst complex compone 0.408 0.286 0.235 2.5e-09
UNIPROTKB|F1RXP8924 EXOC2 "Uncharacterized protein 0.382 0.268 0.264 3.4e-09
MGI|MGI:1913732924 Exoc2 "exocyst complex compone 0.412 0.290 0.246 4.8e-09
UNIPROTKB|E2RCW3924 EXOC2 "Uncharacterized protein 0.383 0.269 0.249 2.7e-08
UNIPROTKB|E1BDW9924 EXOC2 "Uncharacterized protein 0.388 0.272 0.252 5.3e-08
TAIR|locus:2030056 SEC5A "AT1G76850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2113 (748.9 bits), Expect = 9.1e-219, P = 9.1e-219
 Identities = 424/654 (64%), Positives = 519/654 (79%)

Query:     1 METLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCG----NIQPIDSLPVELSGEEVD 56
             +E L N+ HE+A+SDA+W QIQQ+     G  YS T      N   +D   VE   EE+D
Sbjct:   462 VEILRNDTHEKAISDAKWQQIQQN-----GVSYSDTASSNENNAVQVDLQSVEFPSEEID 516

Query:    57 AFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGK 116
               +GRYI+RLTAVL+HHIP FWK A+S+FSGKFAKSSQV+     + S NKAEEKV E +
Sbjct:   517 ILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKFAKSSQVT-----DTSANKAEEKVTEAR 571

Query:   117 YSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKES 176
             YS HSL+EVAGMIR TISVYE KV++TF D ++S ILR +M DAI E+SKACQAFEAKES
Sbjct:   572 YSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKES 631

Query:   177 APPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLP 236
              P  AV+ LR +QAEITKIYI RLCSWM+ ST+GISK+ETWIPVSILERN+SPY ISYLP
Sbjct:   632 TPHSAVVALRKIQAEITKIYIQRLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLP 691

Query:   237 LAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHI 296
             LAFRS++ S M+Q++LMI S++SEA KSEDM+AQ+ EI  SVRL+FLN FLDFA HLE I
Sbjct:   692 LAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQI 751

Query:   297 ASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSE 356
              ++L+Q+ S +++   +NGYS +   E  ++  GSV+DPH+RLL+V+SNIGYCKDEL+SE
Sbjct:   752 GADLSQSTSRQDNW--KNGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASE 809

Query:   357 LYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSG 416
             LYNK+K  WLQSR+K+++ +D+QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG
Sbjct:   810 LYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSG 869

Query:   417 VQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDEN 476
             +QWG+AP VKG+RD AVELLHTLVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN
Sbjct:   870 IQWGSAPQVKGIRDAAVELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEEN 929

Query:   477 QSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVEN 536
             +S++L+S+DANGFCQLM EL+YFET+L  YFT  A ESLK+LQG +LE A  S++EAVE 
Sbjct:   930 RSSDLRSIDANGFCQLMFELEYFETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVET 989

Query:   537 PGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESL 596
             PGH+RRPTRGSED ++D++Q   +VS DDL+AL +Q S+ELLQ ELERTR+NTACF ES 
Sbjct:   990 PGHNRRPTRGSEDTVSDDKQ---SVSADDLLALTKQCSNELLQQELERTRVNTACFAESA 1046

Query:   597 PLDSVPESAKVAYG-FRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 649
             PL+S P   K  Y  FRGSMD          SPSRNYR +Q +GSP  AR RRR
Sbjct:  1047 PLESTPPLPKATYSSFRGSMD----------SPSRNYRGSQSSGSPINARPRRR 1090




GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0009506 "plasmodesma" evidence=IDA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2199552 SEC5B "AT1G21170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G8JLK9 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|619961 Exoc2 "exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O54921 Exoc2 "Exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q96KP1 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXP8 EXOC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1913732 Exoc2 "exocyst complex component 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RCW3 EXOC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BDW9 EXOC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pm.C_LG_II000319
hypothetical protein (1101 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 649
KOG2347934 consensus Sec5 subunit of exocyst complex [Intrace 100.0
KOG2346636 consensus Uncharacterized conserved protein [Funct 97.6
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 97.06
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 95.63
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 94.14
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 89.3
KOG2033863 consensus Low density lipoprotein B-like protein [ 84.44
PF10474234 DUF2451: Protein of unknown function C-terminus (D 84.3
PF14923450 CCDC142: Coiled-coil protein 142 84.14
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=1.2e-78  Score=680.15  Aligned_cols=517  Identities=44%  Similarity=0.632  Sum_probs=452.4

Q ss_pred             hchhHHHHHHHhhcccCCccccccCCCCCCCcCCCccCcccchhhHHHHHHHHHHHHHhhcchhHHHHHHHHhcc-eeec
Q 006355           13 MSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSG-KFAK   91 (649)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~fVe~Ls~vl~~~lP~FWkL~~syf~G-~~~~   91 (649)
                      ++| +|.|.|+++...|+...+..++..+ +.+   +.+-.|-++.+++||+.||+++++|+|+|||+|++||+| +|..
T Consensus       406 ~~~-~~~q~s~~g~~~S~t~s~~~~~~~q-~~~---~~~~~~k~~~r~~fiekL~~l~~s~lP~fWKl~~sy~~G~~~~~  480 (934)
T KOG2347|consen  406 LSD-KWTQPSQNGVHLSDTASSMENSQNQ-VIN---EWKIREKTPERVNFIEKLTDLLLSQLPIFWKLAISYFNGDLFSP  480 (934)
T ss_pred             ccc-cccchhhcccccCchHHHHhhhhhh-hcc---chhhhhhchHHHHHHHHHHHHHHHhCcHHHHHHHHHhcccccCc
Confidence            778 9999999998888877555544433 333   888999999999999999999999999999999999999 5555


Q ss_pred             cc-ccCcccccccccchhhhh--hccccccccchhHHHHHHHHhhhhhHHhhhccccchhhhhhchHHHHHHHHHHHHHh
Q 006355           92 SS-QVSSESNLNASGNKAEEK--VGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKAC  168 (649)
Q Consensus        92 ~~-~k~~~~~~~~~~~~~~~~--~~~~~~~s~~l~dfk~mi~~~i~~~~~kv~~~~~~li~a~~L~~yL~~~v~ei~k~~  168 (649)
                      .. .+++      ..+|..+.  ..++.+..|++...+.|..-+++.++.++...++++--+..+.++|+..++++.++|
T Consensus       481 ~sq~~~s------~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t~s~~~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~~  554 (934)
T KOG2347|consen  481 SSQVQDS------DINKMEQNNEVREKREVFHSLVELALMDRFTLSQSDGKAKSPFGDADISRSLLPWMPLAIKTVRKAC  554 (934)
T ss_pred             ccccChh------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccCCcCCcccccccCccchhHHHHhHHHH
Confidence            55 2332      23455555  667889999999999999999999999999888888888888899999999999999


Q ss_pred             hhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc---cccccccccccccCCCCCccccchHHHHHHHHH
Q 006355          169 QAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS---KDETWIPVSILERNKSPYTISYLPLAFRSIMKS  245 (649)
Q Consensus       169 ~~l~~~~~s~~~~l~~LR~L~s~l~~~~V~rLcsw~rdaae~i~---~lEdW~~~~~~er~~s~~~iT~LP~~Fe~~i~~  245 (649)
                      +.|..++..| +  +.|+.++..+++..++++|+||+.++|.|+   +.|+|.++.+++|+   .++|+||.+||++|++
T Consensus       555 ~sL~ale~~P-~--~~lq~Iq~li~~~rl~~~~~~~~~~~e~is~l~~re~W~~~s~~~rn---~s~t~LP~~fEt~ivs  628 (934)
T KOG2347|consen  555 QSLEALESLP-H--DALQPIQKLITEARLQCLSSWMRASTERISTLAKRETWIPDSILERN---RSITYLPLAFETVIVS  628 (934)
T ss_pred             HHHHHhhhCh-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcc---cchhhhhHHHHHHHhh
Confidence            9999999776 4  667777777888888999999999999999   69999999999987   5699999999999999


Q ss_pred             HHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCcccc-cc---cccCCCCCCC
Q 006355          246 SMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKES-QH---LQNGYSSDPC  321 (649)
Q Consensus       246 ~mq~i~~~l~s~~~E~~~~~dl~~~~~elq~~V~~~f~~~l~sfl~~L~~LA~~~~~~~~d~~s-~~---~~~~~~~~~~  321 (649)
                      +|+++..++++.+||++    +|+ +++++..|...+++.+.+|+-|+++||.+..+...|... +.   .++++++...
T Consensus       629 sl~q~~~~~l~~~gEa~----~f~-~~~~~~~i~el~I~~~~~fl~c~e~L~~h~~~~~~~~~q~~t~~~~~~~~~~~~q  703 (934)
T KOG2347|consen  629 SLEQVNSVLLSFEGEAA----LFE-QPDMQAEIEELSISVRLAFLNCFEDLAIHLEQIGADLSQLTTQIEGQNGFSNAHQ  703 (934)
T ss_pred             hHHhhhhHHhhcccccc----ccC-chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCchhhcccccccccccccccc
Confidence            99999999998899987    888 699999999999999999999999999964432222211 11   1345666654


Q ss_pred             CCcCCCCCCCCCCcCceeeheecchHHHHHhhHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 006355          322 TESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKA  401 (649)
Q Consensus       322 ~~~~~~~~~~~~~~~~RLLltLSNl~ylr~~v~P~L~~~Fe~~f~~~lt~~~~~~~~~tl~~~Ls~Ld~rLFe~Yv~~K~  401 (649)
                      ..++.++++.+.+||+||||||||++||+...+|+|++.|+.-|......      .+.+...|++|+.+||++|++.|+
T Consensus       704 ed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~~~~~~k~------iE~is~s~s~l~s~l~e~Yi~~k~  777 (934)
T KOG2347|consen  704 EDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYTWLLSRKN------IEDISMSLSGLGSKLFENYIEDKA  777 (934)
T ss_pred             hhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHHhhccccc------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence            55555555678899999999999999999999999999996655544433      356668999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccc-
Q 006355          402 NLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNN-  480 (649)
Q Consensus       402 ~~L~~~Ie~gi~~~~~dW~~~p~P~~VRpYv~E~L~~LV~VHAEV~siap~Ll~rVLs~Lve~la~eLl~~F~~~~~~~-  480 (649)
                      ++|++++|||||+|+|+|+.+|+|+|||||++|+||+||+||||||++||+|+++||..+|++++++|+++|+     | 
T Consensus       778 ~~i~~alEp~~~~~~~~W~~~~~~~~irdYa~E~l~~lV~VhaEvf~iap~Ll~kiL~~~ve~i~d~L~~l~~-----~~  852 (934)
T KOG2347|consen  778 DPIRGALEPYLLDGGIQWGMAPPVKGIRDYAKEALHNLVAVHAEVFAIAPQLLDKILGETVEGISDELLRLFS-----CD  852 (934)
T ss_pred             hhhhhcccchhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-----hh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999     6 


Q ss_pred             CCCCCcchhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCchhhhhhhcCCCC
Q 006355          481 LKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMT  560 (649)
Q Consensus       481 v~~fs~~G~lQAtLDIefl~~tL~~YlT~~A~~~l~~iy~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  560 (649)
                      |++||.+|+||+++||+||+++|++|+|++|++.++|        |+|...+.+++     ++||+.++...|++++   
T Consensus       853 v~s~S~nG~lQi~vdl~~l~~~l~~Ylt~~a~~slkq--------ale~l~~~~~g-----~dtr~lee~ln~~k~s---  916 (934)
T KOG2347|consen  853 VQSFSANGALQIMVDLEYLEDVLGPYLTKDAKESLKQ--------ALEALSECLSG-----GDTRRLEECLNDDKQS---  916 (934)
T ss_pred             hhccCCCcceeeeeeHHHHHHHHHHhccHHHHHHHHH--------HHHHhhhhccC-----cchhhHHHHHHHhhHH---
Confidence            8999999999999999999999999999999999995        78899999997     5999999999999998   


Q ss_pred             cChhHHHHHHHHHhHHHHHHHHhhhhhce
Q 006355          561 VSPDDLIALAQQYSSELLQAELERTRINT  589 (649)
Q Consensus       561 ~~~~~~~~~~~~~~~~~l~~~~~~t~~~~  589 (649)
                            .+|+.||.     +++++||.|+
T Consensus       917 ------m~l~Lqc~-----~a~~~t~~~t  934 (934)
T KOG2347|consen  917 ------MRLQLQCF-----QALEDTRFNT  934 (934)
T ss_pred             ------HHHHHHHH-----HHhhhhhcCC
Confidence                  68899998     8899999885



>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] Back     alignment and domain information
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known Back     alignment and domain information
>PF14923 CCDC142: Coiled-coil protein 142 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query649
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 62.6 bits (151), Expect = 3e-10
 Identities = 81/570 (14%), Positives = 167/570 (29%), Gaps = 159/570 (27%)

Query: 120 HSLD-EVAGM---IRNTISVYE--IKVHNTFNDLEDSNILRSYMRDA-IEEISKACQAFE 172
           H +D E        ++ +SV+E     +    D++D    +S +    I+ I  +    +
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDM--PKSILSKEEIDHIIMS----K 58

Query: 173 AKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTI 232
              S        L + Q E+ + ++           + +  +  ++   I    + P  +
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVE----------EVLRINYKFLMSPIKTEQRQPSMM 108

Query: 233 SYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQ----------------- 275
           + + +  R  + +     +   +  R +      +   LLE++                 
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKY-NVSRLQ--PYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 276 ---ESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSS-DPCTESLSDIPGS 331
              +      +   +DF     ++ +    N      + LQ      DP   S SD   +
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKN---CNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 332 VVDPHQRLLIVISNIGYCKDELSSELYNK-YKD--IWLQSREKDQEGTDIQDLVMSFSGL 388
                     +   I   + EL   L +K Y++  + L          ++Q+        
Sbjct: 223 ----------IKLRIHSIQAELRRLLKSKPYENCLLVL-----L----NVQN-------- 255

Query: 389 EEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAV-HAEVF 447
             K    +  +     +   TT      V       +       + L H  + +   E  
Sbjct: 256 -AKAWNAFNLS----CKILLTT--RFKQV----TDFLSAATTTHISLDHHSMTLTPDE-- 302

Query: 448 AGAKPLLDKTLGILVEGL------IDTF-LSLFDE------NQSNNLKSLDANGFCQLML 494
              K LL K L    + L       +   LS+  E         +N K ++ +   +L  
Sbjct: 303 --VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD---KLTT 357

Query: 495 ELDYFETILNPY-----------FTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRP 543
            ++    +L P            F   A      L  ++      S    V N  H    
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS-LIWFDVIKSDVMVVVNKLHKYS- 415

Query: 544 TRGSEDALADERQQGMTVS-PDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVP 602
                  L +++ +  T+S P   + L  +  +E     L R+ ++              
Sbjct: 416 -------LVEKQPKESTISIPSIYLELKVKLENE---YALHRSIVD-------------- 451

Query: 603 ESAKVAYGFRGSMDPSGRNYPAMDSPSRNY 632
                 Y    + D      P +D     Y
Sbjct: 452 -----HYNIPKTFDSDDLIPPYLD----QY 472


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query649
2a2f_X325 Exocyst complex component SEC15; all helical struc 97.05
2fji_1399 Exocyst complex component SEC6; exocytosis, tandem 96.52
3fhn_A706 Protein transport protein TIP20; TIP20P, vesicle t 94.72
3n1e_A141 Vacuolar protein sorting-associated protein 54; sp 88.13
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} Back     alignment and structure
Probab=97.05  E-value=0.0027  Score=66.98  Aligned_cols=105  Identities=14%  Similarity=0.134  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhcc-hhhhHHHHHHHHHHHHHH
Q 006355          389 EEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAG-AKPLLDKTLGILVEGLID  467 (649)
Q Consensus       389 d~rLFe~Yv~~K~~~L~~~Ie~gi~~~~~dW~~~p~P~~VRpYv~E~L~~LV~VHAEV~si-ap~Ll~rVLs~Lve~la~  467 (649)
                      |.+||+.- ..|.+-+-       -...+||.+..+|++.++|+.|++..|=.+=+ .++. .+.+...+.-.....+++
T Consensus       186 e~~I~~~v-~~KIDdfl-------~la~yDW~~~~~~~~ps~yi~dli~fL~~~f~-sl~~LP~~v~~~~~~~a~~his~  256 (325)
T 2a2f_X          186 EKQVGLRI-CSKIDEFF-------ELSAYDWLLVEPPGIASAFITDMISYLKSTFD-SFAFKLPHIAQAACRRTFEHIAE  256 (325)
T ss_dssp             HHHHHHHH-HHHHHHHH-------TTCCTTCC----CCSCCHHHHHHHHHHHHHHH-TTTTTSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHH-------HhcccCCCCCCCCCCccHHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHH
Confidence            45555543 44544442       22388999999999999999999999888887 5554 445788888888899999


Q ss_pred             HHHHhhhhhccccCCCCCcchhHHHHhhHHHHHHhhcc
Q 006355          468 TFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNP  505 (649)
Q Consensus       468 eLl~~F~~~~~~~v~~fs~~G~lQAtLDIefl~~tL~~  505 (649)
                      .++..+.   ++.|++|+.+|..|..+|+.++++....
T Consensus       257 ~l~~~Ll---~~~vk~in~~av~~~~~Dv~~lE~fa~~  291 (325)
T 2a2f_X          257 KIYSIMY---DEDVKQISTGALTQINLDLMQCEFFAAS  291 (325)
T ss_dssp             HHHHHHT---C------CCTTHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhc---CcchhhcCHHHHHHHHHHHHHHHHHHHh
Confidence            9998886   3488999999999999999999998844



>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00