Citrus Sinensis ID: 006680
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | 2.2.26 [Sep-21-2011] | |||||||
| O04630 | 709 | Threonine--tRNA ligase, m | yes | no | 0.455 | 0.407 | 0.702 | 1e-127 | |
| Q8GZ45 | 458 | Probable threonine--tRNA | no | no | 0.450 | 0.624 | 0.587 | 1e-102 | |
| Q54J66 | 710 | Probable threonine--tRNA | yes | no | 0.459 | 0.411 | 0.529 | 2e-96 | |
| P04801 | 734 | Threonine--tRNA ligase, c | yes | no | 0.453 | 0.392 | 0.515 | 3e-94 | |
| Q9D0R2 | 722 | Threonine--tRNA ligase, c | yes | no | 0.448 | 0.394 | 0.528 | 5e-94 | |
| Q5XHY5 | 695 | Threonine--tRNA ligase, c | yes | no | 0.448 | 0.410 | 0.528 | 9e-94 | |
| P26639 | 723 | Threonine--tRNA ligase, c | yes | no | 0.448 | 0.394 | 0.528 | 9e-94 | |
| Q3ZBV8 | 723 | Threonine--tRNA ligase, c | yes | no | 0.448 | 0.394 | 0.525 | 3e-93 | |
| P52709 | 725 | Threonine--tRNA ligase, c | yes | no | 0.450 | 0.394 | 0.523 | 8e-93 | |
| Q8BLY2 | 790 | Probable threonine--tRNA | no | no | 0.447 | 0.359 | 0.526 | 7e-92 |
| >sp|O04630|SYTM_ARATH Threonine--tRNA ligase, mitochondrial OS=Arabidopsis thaliana GN=THRRS PE=2 SV=3 | Back alignment and function desciption |
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Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/323 (70%), Positives = 250/323 (77%), Gaps = 34/323 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFGVLHRNEASGAL+GLTRVRRFQQDDAHIFC Q+K EV+GVLEFIDY
Sbjct: 420 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y++FGFTYELKLSTRPEKYLGDL TW+KAEA L EA+ FGKP +NEGDGAFYGPKID
Sbjct: 480 VYKVFGFTYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKID 539
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I+VSDA+ RKFQCATLQLDFQLP RFNL Y+AEDEAK RPVMIHRA+LGSVERMFAILL
Sbjct: 540 ITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILL 599
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EHYKGKWPFW+SPRQAIVCP+SEKSQ YA +V+ I AG+YVD D TDRKI KK
Sbjct: 600 EHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKK----- 654
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
VREAQLAQYN+ILVVGE EA +GQVSVRVRD
Sbjct: 655 -----------------------------VREAQLAQYNYILVVGETEAATGQVSVRVRD 685
Query: 612 QGDHSNMSIEDLLKHFKEKLEAF 634
HS SIEDLL+ FK K F
Sbjct: 686 NAAHSVKSIEDLLEEFKAKTAEF 708
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Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 3 |
| >sp|Q8GZ45|SYTC_ARATH Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At1g17960 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum GN=thrS1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P04801|SYTC_YEAST Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THS1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars PE=2 SV=1 | Back alignment and function description |
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| >sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 | Back alignment and function description |
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| >sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1 | Back alignment and function description |
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| >sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=trs-1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus GN=Tarsl2 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | ||||||
| 348535718 | 629 | PREDICTED: threonyl-tRNA synthetase, cyt | 0.845 | 0.853 | 0.490 | 1e-162 | |
| 54400362 | 624 | threonyl-tRNA synthetase, cytoplasmic is | 0.845 | 0.860 | 0.486 | 1e-160 | |
| 449527921 | 305 | PREDICTED: threonine--tRNA ligase, mitoc | 0.456 | 0.950 | 0.796 | 1e-143 | |
| 225461914 | 745 | PREDICTED: threonyl-tRNA synthetase, mit | 0.456 | 0.389 | 0.793 | 1e-143 | |
| 449449092 | 724 | PREDICTED: threonine--tRNA ligase, mitoc | 0.456 | 0.400 | 0.796 | 1e-143 | |
| 296089916 | 686 | unnamed protein product [Vitis vinifera] | 0.456 | 0.422 | 0.793 | 1e-143 | |
| 225424719 | 686 | PREDICTED: threonyl-tRNA synthetase, mit | 0.456 | 0.422 | 0.790 | 1e-143 | |
| 357485977 | 711 | Threonyl-tRNA synthetase [Medicago trunc | 0.464 | 0.414 | 0.751 | 1e-140 | |
| 356497888 | 717 | PREDICTED: threonyl-tRNA synthetase, mit | 0.464 | 0.411 | 0.757 | 1e-139 | |
| 356501560 | 710 | PREDICTED: threonyl-tRNA synthetase, mit | 0.464 | 0.415 | 0.754 | 1e-139 |
| >gi|348535718|ref|XP_003455346.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 2 [Oreochromis niloticus] | Back alignment and taxonomy information |
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Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/599 (49%), Positives = 376/599 (62%), Gaps = 62/599 (10%)
Query: 58 IPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I +R++L+ L++E A + + PIK+TLPDG V E + W+T+P +A GIS+ L
Sbjct: 53 IEERLTLYTKLKAEHDALMAERAAKDSKPIKVTLPDGKVVEAESWKTTPYKVACGISQGL 112
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +I+ VN +WD+ RPLE DC L+L FD +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 113 ADNTVIAKVNNSVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCL 172
Query: 175 CIGPCTTRGEGFYYDAFY-GDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMF 231
C GP G FYYD F + G++ + F ++S K KQPFER+E+ ++ LEMF
Sbjct: 173 CYGPPIENG--FYYDMFLENNEGVSSNDFPCLESLCKKIIKEKQPFERLEIKKETLLEMF 230
Query: 232 SDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKD 291
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 231 KYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKAD 290
Query: 292 RESLQRVYGISYPDKKRLKHAFA---------------------ELPLRLADFGVLHRNE 330
E+LQR+YGIS+PD K LK FA ELPLR+ADFGVLHRNE
Sbjct: 291 METLQRIYGISFPDPKMLKEIFALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNE 350
Query: 331 ASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEK 390
SGALTGLTRVRRFQQDDAHIFC QI+ E++G L+F+ Y +FGFT++L LSTRPEK
Sbjct: 351 LSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPEK 410
Query: 391 YLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLD 450
+LGD W++AE L +LNEFG+ W +N GDGAFYGPKIDI + DA+ R QCAT+QLD
Sbjct: 411 FLGDPEVWDQAEKQLENSLNEFGEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLD 470
Query: 451 FQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVC 510
FQLP RFNL + + D +RPV+IHRAILGSVERM AIL E+Y GKWP WLSPRQ +V
Sbjct: 471 FQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVV 530
Query: 511 PVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVA 570
PV + YA +V+ + +G DVD SC
Sbjct: 531 PVGPTCEEYAEKVKQEFHSSGLMTDVDLDP----------------------SC------ 562
Query: 571 GINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKE 629
+ +R AQLAQYNFILVVGE+E S V+VR RD H S+E+ +K K+
Sbjct: 563 -----TLNKKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGEHSVEECIKRLKQ 616
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Source: Oreochromis niloticus Species: Oreochromis niloticus Genus: Oreochromis Family: Cichlidae Order: Perciformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|54400362|ref|NP_001005932.1| threonyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio] gi|53734186|gb|AAH83525.1| Zgc:92586 [Danio rerio] | Back alignment and taxonomy information |
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| >gi|449527921|ref|XP_004170956.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225461914|ref|XP_002265484.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449449092|ref|XP_004142299.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225424719|ref|XP_002265302.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial [Vitis vinifera] gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357485977|ref|XP_003613276.1| Threonyl-tRNA synthetase [Medicago truncatula] gi|355514611|gb|AES96234.1| Threonyl-tRNA synthetase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356497888|ref|XP_003517788.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356501560|ref|XP_003519592.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | ||||||
| TAIR|locus:2148538 | 709 | AT5G26830 [Arabidopsis thalian | 0.462 | 0.414 | 0.713 | 3.4e-237 | |
| TAIR|locus:2030918 | 458 | AT1G17960 [Arabidopsis thalian | 0.388 | 0.539 | 0.677 | 3.7e-162 | |
| WB|WBGene00006617 | 725 | tars-1 [Caenorhabditis elegans | 0.371 | 0.325 | 0.604 | 6.8e-159 | |
| FB|FBgn0027081 | 747 | Aats-thr "Threonyl-tRNA synthe | 0.390 | 0.331 | 0.634 | 1.4e-154 | |
| UNIPROTKB|F1P372 | 673 | TARSL2 "Uncharacterized protei | 0.393 | 0.371 | 0.589 | 4.8e-154 | |
| MGI|MGI:106314 | 722 | Tars "threonyl-tRNA synthetase | 0.411 | 0.361 | 0.577 | 1.4e-152 | |
| RGD|1359527 | 695 | Tars "threonyl-tRNA synthetase | 0.411 | 0.375 | 0.581 | 1.8e-152 | |
| UNIPROTKB|Q5XHY5 | 695 | Tars "Threonine--tRNA ligase, | 0.411 | 0.375 | 0.581 | 1.8e-152 | |
| UNIPROTKB|E2RHW7 | 723 | TARS "Uncharacterized protein" | 0.411 | 0.360 | 0.577 | 6.2e-152 | |
| POMBASE|SPBC25H2.02 | 703 | trs1 "cytoplasmic threonine-tR | 0.420 | 0.379 | 0.559 | 6.2e-152 |
| TAIR|locus:2148538 AT5G26830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1126 (401.4 bits), Expect = 3.4e-237, Sum P(3) = 3.4e-237
Identities = 214/300 (71%), Positives = 248/300 (82%)
Query: 17 RVSSQLFRCQNTKPSSATNLRR--ICAMPS--PNPVKDEEYLIKVIPKRISLFQSLQSEQ 72
R++++ R T SS L C +P+ N KDE YL VIPKRI LF+ +Q+ Q
Sbjct: 4 RLTARSIRRFTTSSSSLPLLSSSSFCTVPTMAANHPKDEAYLSAVIPKRIKLFEQIQANQ 63
Query: 73 QARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTR 132
L+SLPHDPIK+TLPDG+VKEGK+WET+PMDIA ISK LA +ALIS V+ VLWDM R
Sbjct: 64 LENLKSLPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNR 123
Query: 133 PLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFY 192
PLE DC L+LF FDSD+GRDT WHSSAHILGQA+EQ+YGC+LCIGPCTTRGEGFYYD FY
Sbjct: 124 PLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPCTTRGEGFYYDGFY 183
Query: 193 GDLGLNPDHFKSIDSEADKAAK--QPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTI 250
G+LGL+ +HF SI++ A KAAK QPFERIEVT+DQALEMFS+NNFKVE+IN LPAD TI
Sbjct: 184 GELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFKVELINGLPADMTI 243
Query: 251 TVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
TVYRCGPLVDLCRGPHIPNTSFVK F CL+ASSAYW+G+KDRESLQRVYGISYPD+K+LK
Sbjct: 244 TVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWKGDKDRESLQRVYGISYPDQKQLK 303
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| TAIR|locus:2030918 AT1G17960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00006617 tars-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| FB|FBgn0027081 Aats-thr "Threonyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P372 TARSL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:106314 Tars "threonyl-tRNA synthetase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1359527 Tars "threonyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5XHY5 Tars "Threonine--tRNA ligase, cytoplasmic" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RHW7 TARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| POMBASE|SPBC25H2.02 trs1 "cytoplasmic threonine-tRNA ligase Trs1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O04630 | SYTM_ARATH | 6, ., 1, ., 1, ., 3 | 0.7027 | 0.4551 | 0.4076 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.1.1.3 | 0.946 |
| 3rd Layer | 6.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 635 | |||
| PLN02908 | 686 | PLN02908, PLN02908, threonyl-tRNA synthetase | 0.0 | |
| PLN02908 | 686 | PLN02908, PLN02908, threonyl-tRNA synthetase | 1e-170 | |
| PRK00413 | 638 | PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | 1e-141 | |
| PRK12305 | 575 | PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | 1e-132 | |
| COG0441 | 589 | COG0441, ThrS, Threonyl-tRNA synthetase [Translati | 1e-118 | |
| TIGR00418 | 563 | TIGR00418, thrS, threonyl-tRNA synthetase | 1e-117 | |
| cd00771 | 298 | cd00771, ThrRS_core, Threonyl-tRNA synthetase (Thr | 1e-117 | |
| PRK12444 | 639 | PRK12444, PRK12444, threonyl-tRNA synthetase; Revi | 1e-105 | |
| PRK00413 | 638 | PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | 4e-86 | |
| PLN02837 | 614 | PLN02837, PLN02837, threonine-tRNA ligase | 3e-83 | |
| PRK14799 | 545 | PRK14799, thrS, threonyl-tRNA synthetase; Provisio | 2e-73 | |
| PRK12444 | 639 | PRK12444, PRK12444, threonyl-tRNA synthetase; Revi | 4e-59 | |
| PRK12305 | 575 | PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | 4e-51 | |
| COG0441 | 589 | COG0441, ThrS, Threonyl-tRNA synthetase [Translati | 3e-43 | |
| PRK03991 | 613 | PRK03991, PRK03991, threonyl-tRNA synthetase; Vali | 1e-37 | |
| TIGR00418 | 563 | TIGR00418, thrS, threonyl-tRNA synthetase | 3e-33 | |
| cd00860 | 91 | cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon | 6e-27 | |
| cd01667 | 61 | cd01667, TGS_ThrRS_N, TGS _ThrRS_N: ThrRS (threony | 2e-25 | |
| pfam00587 | 171 | pfam00587, tRNA-synt_2b, tRNA synthetase class II | 5e-21 | |
| pfam02824 | 60 | pfam02824, TGS, TGS domain | 3e-16 | |
| PLN02837 | 614 | PLN02837, PLN02837, threonine-tRNA ligase | 1e-15 | |
| pfam03129 | 93 | pfam03129, HGTP_anticodon, Anticodon binding domai | 1e-15 | |
| cd00670 | 235 | cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro | 5e-13 | |
| smart00863 | 43 | smart00863, tRNA_SAD, Threonyl and Alanyl tRNA syn | 1e-10 | |
| pfam07973 | 44 | pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synt | 9e-10 | |
| cd00768 | 211 | cd00768, class_II_aaRS-like_core, Class II tRNA am | 1e-09 | |
| COG0124 | 429 | COG0124, HisS, Histidyl-tRNA synthetase [Translati | 2e-05 | |
| PRK14938 | 387 | PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provi | 4e-05 | |
| PRK00037 | 412 | PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | 3e-04 | |
| TIGR00442 | 397 | TIGR00442, hisS, histidyl-tRNA synthetase | 4e-04 |
| >gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 568 bits (1466), Expect = 0.0
Identities = 235/332 (70%), Positives = 257/332 (77%), Gaps = 37/332 (11%)
Query: 303 YPDKKRLKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEV 362
+ + R ++ ELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFCRE QIKDEV
Sbjct: 391 FAHRVR---SYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEV 447
Query: 363 RGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGD 422
+GVL+F+DY Y +FGFTYELKLSTRPEKYLGDL TW+KAEAALTEALN FGKPWQ+NEGD
Sbjct: 448 KGVLDFLDYVYEVFGFTYELKLSTRPEKYLGDLETWDKAEAALTEALNAFGKPWQLNEGD 507
Query: 423 GAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGS 482
GAFYGPKIDI+VSDALKRKFQCAT+QLDFQLP RF L YSAEDEAK ERPVMIHRAILGS
Sbjct: 508 GAFYGPKIDITVSDALKRKFQCATVQLDFQLPIRFKLSYSAEDEAKIERPVMIHRAILGS 567
Query: 483 VERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRK 542
VERMFAILLEHY GKWPFWLSPRQAIV P+SEKSQ YA +VR ++ AG+YVDVD TDRK
Sbjct: 568 VERMFAILLEHYAGKWPFWLSPRQAIVVPISEKSQDYAEEVRAQLHAAGFYVDVDVTDRK 627
Query: 543 IQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKS 602
IQKK VREAQLAQYN+ILVVGE EA +
Sbjct: 628 IQKK----------------------------------VREAQLAQYNYILVVGEAEAAT 653
Query: 603 GQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 634
G V+VR RD H IE+LL FKE+ F
Sbjct: 654 GTVNVRTRDNVVHGEKKIEELLTEFKEERAEF 685
|
Length = 686 |
| >gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238394 cd00771, ThrRS_core, Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|184826 PRK14799, thrS, threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|235190 PRK03991, PRK03991, threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238437 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|133437 cd01667, TGS_ThrRS_N, TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA | Back alignment and domain information |
|---|
| >gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) | Back alignment and domain information |
|---|
| >gnl|CDD|217243 pfam02824, TGS, TGS domain | Back alignment and domain information |
|---|
| >gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|238359 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|197931 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >gnl|CDD|219676 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|184902 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 635 | |||
| PLN02908 | 686 | threonyl-tRNA synthetase | 100.0 | |
| KOG1637 | 560 | consensus Threonyl-tRNA synthetase [Translation, r | 100.0 | |
| PRK12444 | 639 | threonyl-tRNA synthetase; Reviewed | 100.0 | |
| PRK00413 | 638 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| COG0441 | 589 | ThrS Threonyl-tRNA synthetase [Translation, riboso | 100.0 | |
| PLN02837 | 614 | threonine-tRNA ligase | 100.0 | |
| PRK12305 | 575 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| TIGR00418 | 563 | thrS threonyl-tRNA synthetase. This model represen | 100.0 | |
| PRK14799 | 545 | thrS threonyl-tRNA synthetase; Provisional | 100.0 | |
| PRK03991 | 613 | threonyl-tRNA synthetase; Validated | 100.0 | |
| cd00771 | 298 | ThrRS_core Threonyl-tRNA synthetase (ThrRS) class | 100.0 | |
| PRK12325 | 439 | prolyl-tRNA synthetase; Provisional | 100.0 | |
| PRK04173 | 456 | glycyl-tRNA synthetase; Provisional | 100.0 | |
| TIGR00408 | 472 | proS_fam_I prolyl-tRNA synthetase, family I. Proly | 100.0 | |
| PRK08661 | 477 | prolyl-tRNA synthetase; Provisional | 100.0 | |
| COG0124 | 429 | HisS Histidyl-tRNA synthetase [Translation, riboso | 100.0 | |
| PRK09194 | 565 | prolyl-tRNA synthetase; Provisional | 99.97 | |
| CHL00201 | 430 | syh histidine-tRNA synthetase; Provisional | 99.97 | |
| TIGR00409 | 568 | proS_fam_II prolyl-tRNA synthetase, family II. Pro | 99.96 | |
| PLN02530 | 487 | histidine-tRNA ligase | 99.95 | |
| PRK14894 | 539 | glycyl-tRNA synthetase; Provisional | 99.95 | |
| PRK00037 | 412 | hisS histidyl-tRNA synthetase; Reviewed | 99.95 | |
| TIGR00389 | 551 | glyS_dimeric glycyl-tRNA synthetase, dimeric type. | 99.94 | |
| TIGR00442 | 397 | hisS histidyl-tRNA synthetase. This model finds a | 99.91 | |
| PLN02972 | 763 | Histidyl-tRNA synthetase | 99.91 | |
| PLN02734 | 684 | glycyl-tRNA synthetase | 99.9 | |
| PRK12420 | 423 | histidyl-tRNA synthetase; Provisional | 99.9 | |
| COG0423 | 558 | GRS1 Glycyl-tRNA synthetase (class II) [Translatio | 99.89 | |
| KOG1936 | 518 | consensus Histidyl-tRNA synthetase [Translation, r | 99.89 | |
| KOG2324 | 457 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.77 | |
| cd00778 | 261 | ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) | 99.75 | |
| cd00862 | 202 | ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin | 99.74 | |
| cd00858 | 121 | GlyRS_anticodon GlyRS Glycyl-anticodon binding dom | 99.73 | |
| cd00670 | 235 | Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t | 99.72 | |
| PF03129 | 94 | HGTP_anticodon: Anticodon binding domain; InterPro | 99.7 | |
| PRK01584 | 594 | alanyl-tRNA synthetase; Provisional | 99.7 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 99.69 | |
| PRK14938 | 387 | Ser-tRNA(Thr) hydrolase; Provisional | 99.68 | |
| cd00861 | 94 | ProRS_anticodon_short ProRS Prolyl-anticodon bindi | 99.67 | |
| KOG4163 | 551 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.66 | |
| KOG2298 | 599 | consensus Glycyl-tRNA synthetase and related class | 99.66 | |
| cd02426 | 128 | Pol_gamma_b_Cterm C-terminal domain of mitochondri | 99.63 | |
| PRK12292 | 391 | hisZ ATP phosphoribosyltransferase regulatory subu | 99.58 | |
| cd00860 | 91 | ThrRS_anticodon ThrRS Threonyl-anticodon binding d | 99.55 | |
| TIGR00344 | 851 | alaS alanine--tRNA ligase. The model describes ala | 99.54 | |
| cd00738 | 94 | HGTP_anticodon HGTP anticodon binding domain, as f | 99.51 | |
| PRK00252 | 865 | alaS alanyl-tRNA synthetase; Reviewed | 99.5 | |
| PLN02900 | 936 | alanyl-tRNA synthetase | 99.48 | |
| PRK13902 | 900 | alaS alanyl-tRNA synthetase; Provisional | 99.48 | |
| TIGR03683 | 902 | A-tRNA_syn_arch alanyl-tRNA synthetase. This famil | 99.45 | |
| COG0013 | 879 | AlaS Alanyl-tRNA synthetase [Translation, ribosoma | 99.45 | |
| cd00770 | 297 | SerRS_core Seryl-tRNA synthetase (SerRS) class II | 99.45 | |
| PRK12421 | 392 | ATP phosphoribosyltransferase regulatory subunit; | 99.41 | |
| PRK05431 | 425 | seryl-tRNA synthetase; Provisional | 99.4 | |
| TIGR00414 | 418 | serS seryl-tRNA synthetase. This model represents | 99.37 | |
| cd00772 | 264 | ProRS_core Prolyl-tRNA synthetase (ProRS) class II | 99.35 | |
| PLN02320 | 502 | seryl-tRNA synthetase | 99.34 | |
| PLN02961 | 223 | alanine-tRNA ligase | 99.33 | |
| cd00779 | 255 | ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla | 99.27 | |
| PF00587 | 173 | tRNA-synt_2b: tRNA synthetase class II core domain | 99.25 | |
| PRK00960 | 517 | seryl-tRNA synthetase; Provisional | 99.23 | |
| cd00859 | 91 | HisRS_anticodon HisRS Histidyl-anticodon binding d | 99.22 | |
| PF02824 | 60 | TGS: TGS domain; InterPro: IPR004095 The TGS domai | 99.22 | |
| PLN02678 | 448 | seryl-tRNA synthetase | 99.2 | |
| COG2872 | 241 | Predicted metal-dependent hydrolases related to al | 99.18 | |
| cd00773 | 261 | HisRS-like_core Class II Histidinyl-tRNA synthetas | 99.12 | |
| cd00774 | 254 | GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik | 99.1 | |
| PF07973 | 44 | tRNA_SAD: Threonyl and Alanyl tRNA synthetase seco | 98.84 | |
| cd00768 | 211 | class_II_aaRS-like_core Class II tRNA amino-acyl s | 98.7 | |
| cd01667 | 61 | TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Syn | 98.66 | |
| TIGR00415 | 520 | serS_MJ seryl-tRNA synthetase, Methanococcus janna | 98.6 | |
| smart00863 | 44 | tRNA_SAD Threonyl and Alanyl tRNA synthetase secon | 98.58 | |
| TIGR00443 | 314 | hisZ_biosyn_reg ATP phosphoribosyltransferase, reg | 98.5 | |
| KOG0188 | 895 | consensus Alanyl-tRNA synthetase [Translation, rib | 98.49 | |
| cd01616 | 60 | TGS The TGS domain, named after the ThrRS, GTPase, | 98.2 | |
| PF13393 | 311 | tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI | 97.98 | |
| PF12745 | 273 | HGTP_anticodon2: Anticodon binding domain of tRNAs | 97.94 | |
| cd01668 | 60 | TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) prote | 97.93 | |
| PRK12295 | 373 | hisZ ATP phosphoribosyltransferase regulatory subu | 97.93 | |
| COG0172 | 429 | SerS Seryl-tRNA synthetase [Translation, ribosomal | 97.79 | |
| KOG2105 | 415 | consensus Predicted metal-dependent hydrolase, con | 97.68 | |
| PRK12293 | 281 | hisZ ATP phosphoribosyltransferase regulatory subu | 97.67 | |
| KOG2509 | 455 | consensus Seryl-tRNA synthetase [Translation, ribo | 97.65 | |
| COG3705 | 390 | HisZ ATP phosphoribosyltransferase involved in his | 97.23 | |
| PRK07080 | 317 | hypothetical protein; Validated | 97.17 | |
| TIGR02367 | 453 | PylS pyrrolysyl-tRNA synthetase. PylS is the archa | 96.97 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 96.96 | |
| PRK09537 | 417 | pylS pyrolysyl-tRNA synthetase; Reviewed | 96.23 | |
| PRK11092 | 702 | bifunctional (p)ppGpp synthetase II/ guanosine-3', | 95.99 | |
| PTZ00326 | 494 | phenylalanyl-tRNA synthetase alpha chain; Provisio | 95.72 | |
| PRK07440 | 70 | hypothetical protein; Provisional | 95.54 | |
| PRK05659 | 66 | sulfur carrier protein ThiS; Validated | 95.4 | |
| COG0317 | 701 | SpoT Guanosine polyphosphate pyrophosphohydrolases | 94.93 | |
| COG2104 | 68 | ThiS Sulfur transfer protein involved in thiamine | 94.84 | |
| PRK10872 | 743 | relA (p)ppGpp synthetase I/GTP pyrophosphokinase; | 94.79 | |
| TIGR00691 | 683 | spoT_relA (p)ppGpp synthetase, RelA/SpoT family. ( | 94.72 | |
| PRK08364 | 70 | sulfur carrier protein ThiS; Provisional | 94.66 | |
| PRK07696 | 67 | sulfur carrier protein ThiS; Provisional | 93.84 | |
| cd00565 | 65 | ThiS ThiaminS ubiquitin-like sulfur carrier protei | 93.81 | |
| PRK06944 | 65 | sulfur carrier protein ThiS; Provisional | 93.69 | |
| PRK06488 | 65 | sulfur carrier protein ThiS; Validated | 93.66 | |
| PRK08053 | 66 | sulfur carrier protein ThiS; Provisional | 93.61 | |
| PRK04172 | 489 | pheS phenylalanyl-tRNA synthetase subunit alpha; P | 93.4 | |
| PRK12294 | 272 | hisZ ATP phosphoribosyltransferase regulatory subu | 92.45 | |
| PRK06083 | 84 | sulfur carrier protein ThiS; Provisional | 90.66 | |
| PRK06437 | 67 | hypothetical protein; Provisional | 90.13 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 89.85 | |
| PRK05863 | 65 | sulfur carrier protein ThiS; Provisional | 89.62 | |
| TIGR01683 | 64 | thiS thiamine biosynthesis protein ThiS. This mode | 89.55 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 85.81 | |
| cd00669 | 269 | Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl | 85.38 | |
| PRK01777 | 95 | hypothetical protein; Validated | 84.16 | |
| PF01409 | 247 | tRNA-synt_2d: tRNA synthetases class II core domai | 83.72 | |
| cd00777 | 280 | AspRS_core Asp tRNA synthetase (aspRS) class II co | 82.0 |
| >PLN02908 threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-126 Score=1091.53 Aligned_cols=557 Identities=76% Similarity=1.250 Sum_probs=536.0
Q ss_pred cCCCCCCCCCCchhhhccchhHHHHHHHHHHHHHHHhhCCCCCCeEEEeCCCcEEEeeccCCCHHHHHhhhccccccceE
Q 006680 40 CAMPSPNPVKDEEYLIKVIPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANAL 119 (635)
Q Consensus 40 ~~~~~~~~~~~p~~~~~~~~~R~~lf~~~~~~~~~~~~~~~~~~I~Itl~dg~~~~~~~~~tTp~diak~is~~~~~~iV 119 (635)
+....+...++|+|++ +|++||++++++|++++++++.++|+|++|||+++++++|+|||+|||+++++.+++.+|
T Consensus 12 ~~~~~~~~~~~~~~~~----~r~~~f~~~~~~~~~~~~~~~~~~i~i~~~dg~~~~~~~~~tt~~~ia~~i~~~~~~~~v 87 (686)
T PLN02908 12 APSHPSDEEYLSAVIK----KRIELFEKIQARQLARLESAGGDPIKVTLPDGAVKDGKKWVTTPMDIAKEISKGLANSAL 87 (686)
T ss_pred cccCCCCcCCCchhHH----HHHHHHHHHHHHHHHHhhhccCCceEEEeCCCceEeecCCCCCHHHHHHHhCccchhhcE
Confidence 3344556678999999 999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEEEcCEEeeccccccCCCCeEEeeCCChhHHHHHHHHHHHHHHHHHHHHhCCceEeccccccCCeeEEEEEcCCCCCCH
Q 006680 120 ISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNP 199 (635)
Q Consensus 120 ~AkVNg~l~DL~~pl~~d~~lefl~f~s~eG~~vy~hS~ahlL~~Av~~lfg~~L~ig~sl~~~~Gfy~d~~~~~~~it~ 199 (635)
+|+|||++|||++||++||+|+|++|+|++|+++||||++|||++|++++||+++++||+++.++|||||+.+++.++|+
T Consensus 88 ~a~Vng~l~dL~~~l~~d~~le~l~~~~~eg~~~y~hS~ahlL~~A~~~~~~~~l~ig~~i~~~~Gfy~d~~~~~~~~t~ 167 (686)
T PLN02908 88 IAQVDGVLWDMTRPLEGDCKLKLFKFDDDEGRDTFWHSSAHILGEALELEYGCKLCIGPCTTRGEGFYYDAFYGDRTLNE 167 (686)
T ss_pred EEEECCEEeecCccccCCCeeEEeccccHHHHHHHHHHHHHHHHHHHHHHhCCeEEecCccccCCcEEEEeecCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999997568999999875568999
Q ss_pred hHHHHHHHHHHHHh--cCCeEEEEeCHHHHHHHhhcCcchhhhcccCCCCCeEEEEEeCCeEeecCCCCCCCCccccceE
Q 006680 200 DHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFG 277 (635)
Q Consensus 200 edl~~IE~~m~eiI--~~pIer~~vsreeAle~F~~~~~K~~LL~~~~~~~~v~vYr~g~~iDlc~GPhVpsTG~Ik~F~ 277 (635)
+|+++||++|++|| |+||++++|++++|++||++++||++|++.+++++.|++|+||+|+|+|+||||||||+|+.|+
T Consensus 168 edl~~Ie~~m~~iI~~~~pi~r~~v~~eeA~e~F~~~~~K~~ll~~~~~~~~v~vY~~g~~~D~c~Gphv~sTg~ik~f~ 247 (686)
T PLN02908 168 EDFKPIEARAEKAVKEKQPFERIEVTREEALEMFSENKFKVEIINDLPEDATITVYRCGPLVDLCRGPHIPNTSFVKAFA 247 (686)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEcHHHHHHHHhhCCcHHHHHhhCCCCCeeEEEEECCEEEecCCCCCCCCCccceeE
Confidence 99999999999999 9999999999999999999999999999988666789999999999999999999999999999
Q ss_pred EeecccceeccCCCCCCcceeeccccCChhhhhh----------------------------------------------
Q 006680 278 CLKASSAYWRGNKDRESLQRVYGISYPDKKRLKH---------------------------------------------- 311 (635)
Q Consensus 278 L~k~s~g~~L~~p~~~~lqRIyG~~fp~~~~L~e---------------------------------------------- 311 (635)
|+++++|||+|+.++++||||||++||++++|++
T Consensus 248 l~~~~~~~~lg~~~~~~lqRi~G~sfp~~~~l~~~~~~~~e~~~rdH~~lg~~~~lf~~~~~~~G~~~~lP~g~~i~~~l 327 (686)
T PLN02908 248 CLKASSAYWRGDVDRESLQRVYGISFPDKKLLKEYKHRIEEAKKRDHRLLGQKQELFFFHELSPGSCFFLPHGARIYNKL 327 (686)
T ss_pred EEEecceEEcCCCcchhhEEEeeeccCChHHHHHHHhhhhhccccCHHHHHHhcCCeeecCCCCcceEEechHHHHHHHH
Confidence 9999999999999999999999999999999965
Q ss_pred ---------------------------------------------------------------------cccccceEEee
Q 006680 312 ---------------------------------------------------------------------AFAELPLRLAD 322 (635)
Q Consensus 312 ---------------------------------------------------------------------syrelPlrv~~ 322 (635)
+|+++|+++++
T Consensus 328 ~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~~Lrp~~~~~~~~~~~~~~~s~r~LPlr~~~ 407 (686)
T PLN02908 328 MDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVFEIEKQEFGLKPMNCPGHCLMFAHRVRSYRELPLRLAD 407 (686)
T ss_pred HHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEEecCCeeEEEcCCCcHHHHHHHhccccChhhCCHhHEE
Confidence 78899999999
Q ss_pred eccccccccCCCCcCceeeceeeecCEEEEecCchhHHHHHHHHHHHHHHHHHhCCeEEEEEccCCCCcCCChhhHHHHH
Q 006680 323 FGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAE 402 (635)
Q Consensus 323 vG~lnR~E~~g~l~gLiRvREF~Q~d~~if~~~~~~~~E~~~~l~~~~~~~~~~G~~~~l~ls~r~~~~lg~~~~~~~a~ 402 (635)
+|.+||+|.+|.++||+|+|||+|+|+||||+++|+++|+..+++++.++|+.|||+|.+++||||++++|+.+.|++|+
T Consensus 408 ~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~~~~~ls~r~~~~~g~~~~w~~ae 487 (686)
T PLN02908 408 FGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFTYELKLSTRPEKYLGDLETWDKAE 487 (686)
T ss_pred eeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEeCCccccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcEEcCCCCcccccchhHHHHHHhhhhhhhceeeeecCCCeeeeeEEEecCCCc-cccccccccceee
Q 006680 403 AALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAK-TERPVMIHRAILG 481 (635)
Q Consensus 403 ~~l~~~l~~~g~~~~~~~g~~af~gpkid~~~~d~l~r~~~~~t~~ld~~l~~~~~L~Y~~~~e~~-~~~p~~i~~ai~G 481 (635)
..|.++|+++|++|++++|+++|||||||+.+.|+++|.|||+|+|+||++|.+|||+|||++ +. ..+|+||||||+|
T Consensus 488 ~~l~~~ld~~~~~~~~~~g~~afygpkid~~~~d~l~r~~~~~t~q~df~lp~~f~L~Y~~e~-~~~~~~pv~ihrai~G 566 (686)
T PLN02908 488 AALTEALNAFGKPWQLNEGDGAFYGPKIDITVSDALKRKFQCATVQLDFQLPIRFKLSYSAED-EAKIERPVMIHRAILG 566 (686)
T ss_pred HHHHHHHHHcCCCcEECCCceeecccceEEEEEeccCCEeeccceeecccCHhhcCCEEECCC-CCcCCCCEEEEeCceE
Confidence 999999999999999999999999999999999999999999999999999999999999977 43 5799999999999
Q ss_pred eHHHHHHHHHHHhCCCCCCCCCCceEEEEecCCCcHHHHHHHHHHHHHCCCEEEEeCCCCCcCCCCCcccccccceeeee
Q 006680 482 SVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVHARSTYIEVV 561 (635)
Q Consensus 482 gveR~~~~l~e~~~g~~p~~lsp~qv~v~p~~~~~~~~a~~v~~~L~~~G~~v~~d~~~~~l~kk~~~~~~~~~~~~~~~ 561 (635)
|+|||+++|+||++|+||+|++|.||+|+|++++..+||.+|++.||++|++|++|.++++++||
T Consensus 567 siERli~iL~e~~~g~~p~wlsp~qv~Vipv~~~~~~~A~~va~~LR~~Gi~vevd~~~~~l~kk--------------- 631 (686)
T PLN02908 567 SVERMFAILLEHYAGKWPFWLSPRQAIVVPISEKSQDYAEEVRAQLHAAGFYVDVDVTDRKIQKK--------------- 631 (686)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCCceEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH---------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhhhhcccccccchhhHHHHhhcCCcEEEEEcccccccCeEEEEEcCCCceecccHHHHHHHHHHHHHhcC
Q 006680 562 FSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAFQ 635 (635)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~ir~A~~~~~~~~lvvG~~E~~~~~V~vr~~~~~~~~~~~~e~l~~~~~~~~~~~~ 635 (635)
+++|++.|+||++|||++|.++|+|+||+|+++++..++++++++.++++.++|.
T Consensus 632 -------------------ir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~~~ 686 (686)
T PLN02908 632 -------------------VREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAEFK 686 (686)
T ss_pred -------------------HHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999988763
|
|
| >KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12444 threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK00413 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02837 threonine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK12305 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00418 thrS threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK14799 thrS threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK03991 threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK12325 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK04173 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I | Back alignment and domain information |
|---|
| >PRK08661 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK09194 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >CHL00201 syh histidine-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II | Back alignment and domain information |
|---|
| >PLN02530 histidine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK14894 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00037 hisS histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type | Back alignment and domain information |
|---|
| >TIGR00442 hisS histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02972 Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02734 glycyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12420 histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea | Back alignment and domain information |
|---|
| >cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain | Back alignment and domain information |
|---|
| >cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis | Back alignment and domain information |
|---|
| >PRK01584 alanyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK14938 Ser-tRNA(Thr) hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria | Back alignment and domain information |
|---|
| >KOG4163 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2298 consensus Glycyl-tRNA synthetase and related class II tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity | Back alignment and domain information |
|---|
| >PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
| >TIGR00344 alaS alanine--tRNA ligase | Back alignment and domain information |
|---|
| >cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) | Back alignment and domain information |
|---|
| >PRK00252 alaS alanyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PLN02900 alanyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK13902 alaS alanyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR03683 A-tRNA_syn_arch alanyl-tRNA synthetase | Back alignment and domain information |
|---|
| >COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05431 seryl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00414 serS seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PLN02320 seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02961 alanine-tRNA ligase | Back alignment and domain information |
|---|
| >cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes | Back alignment and domain information |
|---|
| >PRK00960 seryl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain | Back alignment and domain information |
|---|
| >PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) [] | Back alignment and domain information |
|---|
| >PLN02678 seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] | Back alignment and domain information |
|---|
| >cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
| >cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain | Back alignment and domain information |
|---|
| >PF07973 tRNA_SAD: Threonyl and Alanyl tRNA synthetase second additional domain; InterPro: IPR012947 The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer | Back alignment and domain information |
|---|
| >cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >cd01667 TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA | Back alignment and domain information |
|---|
| >TIGR00415 serS_MJ seryl-tRNA synthetase, Methanococcus jannaschii family | Back alignment and domain information |
|---|
| >smart00863 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
| >KOG0188 consensus Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd01616 TGS The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin | Back alignment and domain information |
|---|
| >PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A | Back alignment and domain information |
|---|
| >PF12745 HGTP_anticodon2: Anticodon binding domain of tRNAs; InterPro: IPR024435 This is an anticodon binding domain, found largely on Gcn2 proteins which bind tRNA to down regulate translation in certain stress situations [] | Back alignment and domain information |
|---|
| >cd01668 TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a ribosome-associated protein that is activated during amino acid starvation and thought to mediate the stringent response | Back alignment and domain information |
|---|
| >PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2105 consensus Predicted metal-dependent hydrolase, contains AlaS domain [General function prediction only] | Back alignment and domain information |
|---|
| >PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >KOG2509 consensus Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07080 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02367 PylS pyrrolysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional | Back alignment and domain information |
|---|
| >PRK07440 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05659 sulfur carrier protein ThiS; Validated | Back alignment and domain information |
|---|
| >COG0317 SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK10872 relA (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00691 spoT_relA (p)ppGpp synthetase, RelA/SpoT family | Back alignment and domain information |
|---|
| >PRK08364 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK07696 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein | Back alignment and domain information |
|---|
| >PRK06944 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK06488 sulfur carrier protein ThiS; Validated | Back alignment and domain information |
|---|
| >PRK08053 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >PRK06083 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK06437 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK05863 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >TIGR01683 thiS thiamine biosynthesis protein ThiS | Back alignment and domain information |
|---|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
| >cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >PRK01777 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 635 | ||||
| 3ugq_A | 460 | Crystal Structure Of The Apo Form Of The Yeast Mito | 5e-69 | ||
| 1evk_A | 401 | Crystal Structure Of A Truncated Form Of Threonyl-T | 6e-63 | ||
| 1qf6_A | 642 | Structure Of E. Coli Threonyl-Trna Synthetase Compl | 7e-63 | ||
| 1nyq_A | 645 | Structure Of Staphylococcus Aureus Threonyl-Trna Sy | 2e-52 | ||
| 3a32_A | 471 | Crystal Structure Of Putative Threonyl-Trna Synthet | 5e-33 | ||
| 3a31_A | 471 | Crystal Structure Of Putative Threonyl-Trna Synthet | 1e-31 | ||
| 1tje_A | 224 | Crystal Structure Of The Editing Domain Of Threonyl | 9e-30 | ||
| 1wwt_A | 88 | Solution Structure Of The Tgs Domain From Human Thr | 7e-16 |
| >pdb|3UGQ|A Chain A, Crystal Structure Of The Apo Form Of The Yeast Mitochondrial Threonyl- Trna Synthetase Determined At 2.1 Angstrom Resolution Length = 460 | Back alignment and structure |
|
| >pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine Length = 401 | Back alignment and structure |
| >pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642 | Back alignment and structure |
| >pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645 | Back alignment and structure |
| >pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix Length = 471 | Back alignment and structure |
| >pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix (Selenomethionine Derivative) Length = 471 | Back alignment and structure |
| >pdb|1TJE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna Synthetase Length = 224 | Back alignment and structure |
| >pdb|1WWT|A Chain A, Solution Structure Of The Tgs Domain From Human Threonyl- Trna Synthetase Length = 88 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Length = 460 | Back alignment and structure |
|---|
Score = 472 bits (1216), Expect = e-162
Identities = 129/349 (36%), Positives = 192/349 (55%), Gaps = 63/349 (18%)
Query: 315 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYR 374
ELPLR +DF LHRNEASGAL+GLTR+R+F QDD HIFC SQ+K E+ L+ ID Y
Sbjct: 147 ELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYN 206
Query: 375 -IFGFT---------YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGA 424
IF F Y + STRP+ ++GDL W AE L E L E GKPW++N GDGA
Sbjct: 207 KIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGA 266
Query: 425 FYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVE 484
FYGPK+DI V+D L++ Q AT+QLDFQLP+RF+L + +D + +RP+MIHRA GS+E
Sbjct: 267 FYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSY-KRPIMIHRATFGSIE 325
Query: 485 RMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRD-----------------HI 527
R A+L++ +G+WPFWL+P QA++ PV+ K+ +
Sbjct: 326 RFMALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPL 385
Query: 528 YRAGYYVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLA 587
+ VD+D + + + ++ A L
Sbjct: 386 NDWHFNVDLDIRNEPVGYR----------------------------------IKSAILK 411
Query: 588 QYNFILVVGEEEAKSGQVSVRVRD-QGDHSNMSIEDLLKHFKEKLEAFQ 635
Y+++++VG+EE + + ++R RD + +++ + + F E + ++
Sbjct: 412 NYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELEKNYK 460
|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Length = 401 | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 | Back alignment and structure |
|---|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Length = 471 | Back alignment and structure |
|---|
| >1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* Length = 224 | Back alignment and structure |
|---|
| >1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288 | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Length = 522 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Length = 501 | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Length = 459 | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Length = 572 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 635 | |||
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 100.0 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 100.0 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 100.0 | |
| 1tke_A | 224 | Threonyl-tRNA synthetase; ligase; 1.46A {Escherich | 100.0 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 100.0 | |
| 3a32_A | 471 | Probable threonyl-tRNA synthetase 1; aeropyrum per | 100.0 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 100.0 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 2zt5_A | 693 | Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP | 100.0 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 100.0 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 100.0 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 100.0 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 100.0 | |
| 1g5h_A | 454 | Mitochondrial DNA polymerase accessory subunit; in | 100.0 | |
| 3ikl_A | 459 | DNA polymerase subunit gamma-2, mitochondrial; tra | 100.0 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 100.0 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 100.0 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 100.0 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 100.0 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 100.0 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 100.0 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 99.98 | |
| 4g85_A | 517 | Histidine-tRNA ligase, cytoplasmic; synthetase; 3. | 99.97 | |
| 4g84_A | 464 | Histidine--tRNA ligase, cytoplasmic; synthetase; 2 | 99.96 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 99.95 | |
| 1v4p_A | 157 | Alanyl-tRNA synthetase; alanine-tRNA ligase, riken | 99.94 | |
| 2ztg_A | 739 | Alanyl-tRNA synthetase; class-II aminoacyl-tRNA sy | 99.8 | |
| 3kew_A | 241 | DHHA1 domain protein; structural genomics, PSI-2, | 99.8 | |
| 2dq3_A | 425 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.79 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.74 | |
| 1v95_A | 130 | Nuclear receptor coactivator 5; coactivator indepe | 99.73 | |
| 2zze_A | 752 | Alanyl-tRNA synthetase; ligase, hydrolase; HET: ML | 99.73 | |
| 2e1b_A | 216 | PH0108, 216AA long hypothetical alanyl-tRNA synthe | 99.73 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 99.71 | |
| 1wwt_A | 88 | Threonyl-tRNA synthetase, cytoplasmic; TGS domain, | 99.68 | |
| 1ses_A | 421 | Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A | 99.64 | |
| 1wle_A | 501 | Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo | 99.61 | |
| 3lss_A | 484 | Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.32 | |
| 3qne_A | 485 | Seryl-tRNA synthetase, cytoplasmic; amino acid bio | 99.27 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 99.27 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 99.27 | |
| 3vbb_A | 522 | Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l | 99.27 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 99.21 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 99.18 | |
| 2kmm_A | 73 | Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohy | 99.08 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 99.08 | |
| 3hvz_A | 78 | Uncharacterized protein; alpha-beta protein, struc | 98.83 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 98.81 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 97.58 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 95.99 | |
| 1tyg_B | 87 | YJBS; alpha beta barrel, protein-protein complex, | 94.67 | |
| 1f0z_A | 66 | THis protein; ubiquitin fold, transport protein; N | 93.75 | |
| 1ryj_A | 70 | Unknown; beta/alpha protein, structural genomics, | 93.62 | |
| 2l32_A | 74 | Small archaeal modifier protein 2; protein BIN; NM | 93.05 | |
| 2k5p_A | 78 | THis protein, thiamine-biosynthesis protein; NESG, | 92.79 | |
| 2cu3_A | 64 | Unknown function protein; thermus thermophilus HB8 | 92.76 | |
| 2kl0_A | 73 | Putative thiamin biosynthesis THis; structural gen | 92.64 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 91.12 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 88.38 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 87.9 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 86.98 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 86.64 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 84.02 | |
| 1rws_A | 77 | Hypothetical protein PF1061; residual dipolar coup | 83.9 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 81.09 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 80.12 |
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-109 Score=946.95 Aligned_cols=513 Identities=41% Similarity=0.741 Sum_probs=493.6
Q ss_pred CeEEEeCCCcEEEeeccCCCHHHHHhhhccccccceEEEEEcCEEeeccccccCCCCeEEeeCCChhHHHHHHHHHHHHH
Q 006680 83 PIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHIL 162 (635)
Q Consensus 83 ~I~Itl~dg~~~~~~~~~tTp~diak~is~~~~~~iV~AkVNg~l~DL~~pl~~d~~lefl~f~s~eG~~vy~hS~ahlL 162 (635)
+|+||+|||++++++. +|||+|||++|++++++.+++|+|||++|||++||+.||+|++++|+|++|++++|||++|||
T Consensus 1 ~~~~~~~d~~~~~~~~-~~t~~~~a~~i~~~~~~~~~~~~vng~~~dl~~~l~~d~~~~~~~~~~~~~~~~~~HSa~HlL 79 (642)
T 1qf6_A 1 MPVITLPDGSQRHYDH-AVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLL 79 (642)
T ss_dssp -CEEECTTSCEEECSS-CBCHHHHHHHHCHHHHHHCSEEEETTEEEETTSCBCSCEECCEECTTSHHHHHHHHHHHHHHH
T ss_pred CceEEcCCCCeEEecC-CCCHHHHHHHhchhhhhheEEEEECCEEeccccccCCCceEEEeecCcHHHHHHHHHHHHHHH
Confidence 3899999999999886 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-CCceEeccccccCCeeEEEEEcCCCCCCHhHHHHHHHHHHHHh--cCCeEEEEeCHHHHHHHhhc--Ccch
Q 006680 163 GQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSD--NNFK 237 (635)
Q Consensus 163 ~~Av~~lf-g~~L~ig~sl~~~~Gfy~d~~~~~~~it~edl~~IE~~m~eiI--~~pIer~~vsreeAle~F~~--~~~K 237 (635)
++|++++| ++++++||+++ +||||||++ +.++|++|+++||++|+++| |+||++.++++++|+++|+. ++||
T Consensus 80 ~~Al~~~~~~~~~~~G~~i~--~gfy~Df~~-~~~~t~edl~~IE~~m~~iI~~~~~v~~~~~~~~eA~~~~~~~~e~yk 156 (642)
T 1qf6_A 80 GHAIKQLWPHTKMAIGPVID--NGFYYDVDL-DRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYK 156 (642)
T ss_dssp HHHHHHHCTTCEECCCCEET--TEEEEEEEC-SSCCCHHHHHHHHHHHHHHHHHTCBEEEEECCHHHHHHHHHHHTCHHH
T ss_pred HHHHHHhCCCcEEEECCccC--CeeEEEEeC-CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEecHHHHHHHhhhhCCcch
Confidence 99999999 67999999999 999999997 56899999999999999999 99999999999999999987 7899
Q ss_pred hhhc-ccCCCCCeEEEEEeCCeEeecCCCCCCCCccccceEEeecccceeccCCCCCCcceeeccccCChhhhhh-----
Q 006680 238 VEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKH----- 311 (635)
Q Consensus 238 ~~LL-~~~~~~~~v~vYr~g~~iDlc~GPhVpsTG~Ik~F~L~k~s~g~~L~~p~~~~lqRIyG~~fp~~~~L~e----- 311 (635)
++|+ +.+|.++.|++|+||+|+|+|+||||||||+|+.|+|++.+++||+++.++..+||+||++||+++.|.+
T Consensus 157 ~~li~~~~~~~~~v~vy~~g~~~dlC~GpHv~~Tg~I~~fkl~~~~~~yw~g~~~~~~l~r~~g~~~~~~~~l~~~~~~~ 236 (642)
T 1qf6_A 157 VSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236 (642)
T ss_dssp HHHHHHHSCTTCCCEEEEETTEEECCSSCCCSBGGGCCSEEEEEEEEEEGGGCTTSCEEEEEEEEECSSHHHHHHHHHHH
T ss_pred hhhhhcccCCCCceEEEEECCEEEecCCCccCCCCcceeEEEeeeccccccCccCCceeEeeeccccCchhHHhhhhhhh
Confidence 9999 8787667899999999999999999999999999999999999999999999999999999999997731
Q ss_pred --------------------------------------------------------------------------------
Q 006680 312 -------------------------------------------------------------------------------- 311 (635)
Q Consensus 312 -------------------------------------------------------------------------------- 311 (635)
T Consensus 237 eea~~rdH~~lg~~l~l~~~~~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~ 316 (642)
T 1qf6_A 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDA 316 (642)
T ss_dssp HHHHTTCHHHHHHHTTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGG
T ss_pred hccccCCHHHHHHhcCccccccCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccc
Confidence
Q ss_pred ------------------------------cccccceEEeeeccccccccCCCCcCceeeceeeecCEEEEecCchhHHH
Q 006680 312 ------------------------------AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDE 361 (635)
Q Consensus 312 ------------------------------syrelPlrv~~vG~lnR~E~~g~l~gLiRvREF~Q~d~~if~~~~~~~~E 361 (635)
+|+++|+|++++|.+||+|.+|...||+|+|||+|+|+|+||+++++++|
T Consensus 317 my~~d~~~~~~~LrP~~~~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~~~~~~e 396 (642)
T 1qf6_A 317 MFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE 396 (642)
T ss_dssp CEEEEETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHH
T ss_pred ceeeecCCceEEecCCCCHHHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCHHHHHHH
Confidence 78899999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCC-eEEEEEccCCCCcCCChhhHHHHHHHHHHHHHHcCCCcEEcCCCCcccccchhHHHHHHhhh
Q 006680 362 VRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKR 440 (635)
Q Consensus 362 ~~~~l~~~~~~~~~~G~-~~~l~ls~r~~~~lg~~~~~~~a~~~l~~~l~~~g~~~~~~~g~~af~gpkid~~~~d~l~r 440 (635)
+..+++++.++|+.||| +|.+.++++|+++.|+.+.|+.|+..+.++|+..|++|++++|+|+|||||+|+.+.|++|+
T Consensus 397 ~~~~i~~~~~i~~~lGl~~~~v~l~~~~e~~~g~~e~w~~a~~~l~~~l~~~g~~~~~~~g~~afygpk~d~~~~d~~G~ 476 (642)
T 1qf6_A 397 VNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDR 476 (642)
T ss_dssp HHHHHHHHHHHHGGGTCCCCEEEEECCCSSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHHHHHHHHHHHHHHcCCCcEEcCCCcccccCcccEEEEccCCc
Confidence 99999999999999999 59999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhceeeeecCCCeeeeeEEEecCCCccccccccccceeeeHHHHHHHHHHHhCCCCCCCCCCceEEEEecCCCcHHHH
Q 006680 441 KFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYA 520 (635)
Q Consensus 441 ~~~~~t~~ld~~l~~~~~L~Y~~~~e~~~~~p~~i~~ai~GgveR~~~~l~e~~~g~~p~~lsp~qv~v~p~~~~~~~~a 520 (635)
.|+|+|+|+||++|.|||+.|.+.+ |+..+|+|+|||++||+||++++|+|+++|.||.|++|.||+|+|++++..+||
T Consensus 477 ~~~~gti~~df~l~~r~~~~y~~~~-g~~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~~~~~~~a 555 (642)
T 1qf6_A 477 AWQCGTVQLDFSLPSRLSASYVGED-NERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYV 555 (642)
T ss_dssp EEEEEEEEEESSHHHHTTCCEECTT-SCEECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHH
T ss_pred eEEeeeEEEeccCCccCCCEEEecC-CCCcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeCHHHHHHH
Confidence 9999999999999999999998876 667789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEeCCCCCcCCCCCcccccccceeeeeehhhhhhhcccccccchhhHHHHhhcCCcEEEEEccccc
Q 006680 521 LQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEA 600 (635)
Q Consensus 521 ~~v~~~L~~~G~~v~~d~~~~~l~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~A~~~~~~~~lvvG~~E~ 600 (635)
.+|++.|+++|++|++|+++.++++| ||+|++.|+||+||||++|+
T Consensus 556 ~~v~~~L~~~Gi~v~~D~~~~~~g~k----------------------------------ir~a~~~g~p~~ivvG~~E~ 601 (642)
T 1qf6_A 556 NELTQKLSNAGIRVKADLRNEKIGFK----------------------------------IREHTLRRVPYMLVCGDKEV 601 (642)
T ss_dssp HHHHHHHHTTTCCEEEECCSSCHHHH----------------------------------HHHHHHTTCSEEEEECTTTG
T ss_pred HHHHHHHHhCCCEEEEECCCCCHHHH----------------------------------HHHHHHcCCCEEEEECchhh
Confidence 99999999999999999999999999 99999999999999999999
Q ss_pred ccCeEEEEEcCCCceecccHHHHHHHHHHHHHhc
Q 006680 601 KSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 634 (635)
Q Consensus 601 ~~~~V~vr~~~~~~~~~~~~e~l~~~~~~~~~~~ 634 (635)
++|+|+||+|+++++..|+++++++.++++++++
T Consensus 602 ~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 602 ESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp GGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred hcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999988776
|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
| >1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* | Back alignment and structure |
|---|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A | Back alignment and structure |
|---|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
| >2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
| >1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* | Back alignment and structure |
|---|
| >3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
| >4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
| >4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
| >1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A | Back alignment and structure |
|---|
| >2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens} | Back alignment and structure |
|---|
| >2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
| >1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 | Back alignment and structure |
|---|
| >2zze_A Alanyl-tRNA synthetase; ligase, hydrolase; HET: MLY; 2.16A {Pyrococcus horikoshii} PDB: 2zzf_A 2zzg_A* | Back alignment and structure |
|---|
| >2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2 | Back alignment and structure |
|---|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A | Back alignment and structure |
|---|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} | Back alignment and structure |
|---|
| >3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* | Back alignment and structure |
|---|
| >3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A | Back alignment and structure |
|---|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
| >3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* | Back alignment and structure |
|---|
| >2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
| >3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum} | Back alignment and structure |
|---|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
| >1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2 | Back alignment and structure |
|---|
| >1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2 | Back alignment and structure |
|---|
| >1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2 | Back alignment and structure |
|---|
| >2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii} | Back alignment and structure |
|---|
| >2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A | Back alignment and structure |
|---|
| >2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
| >1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 635 | ||||
| d1qf6a4 | 291 | d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th | 5e-60 | |
| d1nyra4 | 291 | d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th | 4e-44 | |
| d1nyra3 | 179 | d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrR | 3e-43 | |
| d1tkea2 | 162 | d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrR | 1e-34 | |
| d1g5ha2 | 290 | d.104.1.1 (A:41-330) The aaRS-like accessory subun | 8e-25 | |
| d1b76a2 | 331 | d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) | 2e-22 | |
| d1nyra1 | 113 | c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (Thr | 7e-19 | |
| d1qf6a1 | 110 | c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (Thr | 2e-17 | |
| d1tkea1 | 62 | d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS | 1e-15 | |
| d1nyra2 | 59 | d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS | 2e-14 | |
| d1v4pa_ | 151 | d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeo | 6e-14 | |
| d1g5ha1 | 127 | c.51.1.1 (A:343-469) The aaRS-like accessory subun | 5e-13 | |
| d1hc7a2 | 272 | d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) | 6e-13 | |
| d1qe0a1 | 95 | c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (His | 2e-11 | |
| d1h4vb1 | 96 | c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (His | 6e-11 | |
| d1nj1a1 | 127 | c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS | 9e-11 | |
| d1nj8a3 | 268 | d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) | 8e-10 | |
| d1hc7a1 | 127 | c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS | 9e-10 | |
| d1nj1a3 | 265 | d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS | 4e-09 | |
| d1nj8a1 | 126 | c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS | 4e-09 | |
| d1atia1 | 111 | c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS | 7e-09 | |
| d1kmma1 | 99 | c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (His | 1e-08 | |
| d1wu7a1 | 97 | c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (His | 2e-08 | |
| d2e1ba2 | 129 | d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C | 3e-04 |
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Escherichia coli [TaxId: 562]
Score = 200 bits (509), Expect = 5e-60
Identities = 102/237 (43%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 265 PHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPD----KKRLKHAFAELPLRL 320
P + + + G + ++ P + ++ +LPLR+
Sbjct: 55 PFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRM 114
Query: 321 ADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT- 379
A+FG HRNE SG+L GL RVR F QDDAHIFC E QI+DEV G + + Y FGF
Sbjct: 115 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 174
Query: 380 YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALK 439
+KLSTRPEK +G W++AEA L AL E P++ G+GAFYGPKI+ ++ D L
Sbjct: 175 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 234
Query: 440 RKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKG 496
R +QC T+QLDF LP R + Y ED + PVMIHRAILGS+ER IL E + G
Sbjct: 235 RAWQCGTVQLDFSLPSRLSASYVGEDNERK-VPVMIHRAILGSMERFIGILTEEFAG 290
|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Length = 291 | Back information, alignment and structure |
|---|
| >d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 179 | Back information, alignment and structure |
|---|
| >d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Length = 162 | Back information, alignment and structure |
|---|
| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 290 | Back information, alignment and structure |
|---|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Length = 331 | Back information, alignment and structure |
|---|
| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 113 | Back information, alignment and structure |
|---|
| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 110 | Back information, alignment and structure |
|---|
| >d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]} Length = 62 | Back information, alignment and structure |
|---|
| >d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 59 | Back information, alignment and structure |
|---|
| >d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 151 | Back information, alignment and structure |
|---|
| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Length = 272 | Back information, alignment and structure |
|---|
| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 95 | Back information, alignment and structure |
|---|
| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 96 | Back information, alignment and structure |
|---|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 127 | Back information, alignment and structure |
|---|
| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 268 | Back information, alignment and structure |
|---|
| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Length = 127 | Back information, alignment and structure |
|---|
| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 265 | Back information, alignment and structure |
|---|
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 126 | Back information, alignment and structure |
|---|
| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 111 | Back information, alignment and structure |
|---|
| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 | Back information, alignment and structure |
|---|
| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 97 | Back information, alignment and structure |
|---|
| >d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 129 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 635 | |||
| d1tkea2 | 162 | Threonyl-tRNA synthetase (ThrRS), second 'addition | 100.0 | |
| d1nyra3 | 179 | Threonyl-tRNA synthetase (ThrRS), second 'addition | 100.0 | |
| d1qf6a4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Escherichia coli | 100.0 | |
| d1nyra4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a | 100.0 | |
| d1nyra1 | 113 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.93 | |
| d1qf6a1 | 110 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.91 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 99.88 | |
| d1nj1a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me | 99.84 | |
| d1nj8a1 | 126 | Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M | 99.82 | |
| d1v4pa_ | 151 | Hypothetical protein PH0574 {Archaeon Pyrococcus h | 99.81 | |
| d1hc7a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Thermus the | 99.79 | |
| d1g5ha1 | 127 | The aaRS-like accessory subunit of mitochondrial p | 99.78 | |
| d1atia1 | 111 | Glycyl-tRNA synthetase (GlyRS), C-terminal domain | 99.74 | |
| d1kmma1 | 99 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.72 | |
| d1wu7a1 | 97 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.72 | |
| d1qe0a1 | 95 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.71 | |
| d1nj8a3 | 268 | Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc | 99.67 | |
| d1h4vb1 | 96 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.66 | |
| d1g5ha2 | 290 | The aaRS-like accessory subunit of mitochondrial p | 99.62 | |
| d1nj1a3 | 265 | Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth | 99.55 | |
| d1hc7a2 | 272 | Prolyl-tRNA synthetase (ProRS) {Thermus thermophil | 99.53 | |
| d1tkea1 | 62 | Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi | 99.45 | |
| d1nyra2 | 59 | Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi | 99.39 | |
| d2e1ba2 | 129 | AlaX-M trans-editing enzyme, C-terminal domain {Py | 99.38 | |
| d1seta2 | 311 | Seryl-tRNA synthetase (SerRS) {Thermus thermophilu | 99.27 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 98.63 | |
| d1h4vb2 | 324 | Histidyl-tRNA synthetase (HisRS) {Thermus thermoph | 98.63 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 98.48 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 98.47 | |
| d1usya_ | 275 | ATP phosphoribosyltransferase regulatory subunit H | 98.35 | |
| d1z7ma1 | 318 | ATP phosphoribosyltransferase regulatory subunit H | 98.23 | |
| d1wu7a2 | 327 | Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop | 97.89 | |
| d1v95a_ | 130 | Nuclear receptor coactivator 5 (KIAA1637) {Human ( | 97.35 | |
| d1wxqa2 | 76 | GTP-binding protein PH0525 {Pyrococcus horikoshii | 92.89 | |
| d1zud21 | 65 | Thiamin biosynthesis sulfur carrier protein ThiS { | 91.49 | |
| d1tygb_ | 65 | Thiamin biosynthesis sulfur carrier protein ThiS { | 83.51 | |
| d2cu3a1 | 63 | Uncharacterised protein TTHA0675 {Thermus thermoph | 82.6 |
| >d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: RRF/tRNA synthetase additional domain-like superfamily: ThrRS/AlaRS common domain family: Threonyl-tRNA synthetase (ThrRS), second 'additional' domain domain: Threonyl-tRNA synthetase (ThrRS), second 'additional' domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-40 Score=316.10 Aligned_cols=155 Identities=35% Similarity=0.693 Sum_probs=145.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHh-CCceEeccccccCCeeEEEEEcCCCCCCHhHHHHHHHHHHHHh--cCCeEEEEe
Q 006680 146 DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEV 222 (635)
Q Consensus 146 ~s~eG~~vy~hS~ahlL~~Av~~lf-g~~L~ig~sl~~~~Gfy~d~~~~~~~it~edl~~IE~~m~eiI--~~pIer~~v 222 (635)
.|+||.++||||++|||++|++++| ++++.+||+++ +||||||.. +.+++++|+.+||++|+++| ++||++..+
T Consensus 1 kd~egl~v~rhS~ahlLa~Av~~l~p~~kl~~g~~~~--~GfyyD~~~-~~~~~~edl~~ie~~m~~ii~~~~~~~~~~~ 77 (162)
T d1tkea2 1 KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVID--NGFYYDVDL-DRTLTQEDVEALEKRMHELAEKNYDVIKKKV 77 (162)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCCEET--TEEEEEEEC-SSCCCHHHHHHHHHHHHHHHTTCCBCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEeccccC--CeEEEEeec-cCCCCHHHHHHHHHHHHHHHHhcCCceEEEe
Confidence 4789999999999999999999999 89999999999 999999986 67899999999999999999 999999999
Q ss_pred CHHHHHHHhhcCcc--hhhhccc-CCCCCeEEEEEeCCeEeecCCCCCCCCccccceEEeecccceeccCCCCCCcceee
Q 006680 223 TRDQALEMFSDNNF--KVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVY 299 (635)
Q Consensus 223 sreeAle~F~~~~~--K~~LL~~-~~~~~~v~vYr~g~~iDlc~GPhVpsTG~Ik~F~L~k~s~g~~L~~p~~~~lqRIy 299 (635)
++++|+++|..+++ |..++.. .+.+..+++|+||+|+|+|+||||||||.|++|+|++.+++||+|+++|++|||||
T Consensus 78 s~~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~y~~g~~~dlc~Gphv~sTg~ik~FkL~~vsgaYw~gd~~n~~LqRiy 157 (162)
T d1tkea2 78 SWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIY 157 (162)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHSCTTCCCEEEEETTEEEEESCCCCSBGGGCCCEEEEEEEEEEGGGCTTSCEEEEEE
T ss_pred chHHHHHHHHHhhcchhhheeeccccccccceeeccCceEeecCCCccccCcccceEEEEEechhhcCCCCCCcccEEEE
Confidence 99999999998765 6667765 33567899999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 006680 300 GISY 303 (635)
Q Consensus 300 G~~f 303 (635)
|++|
T Consensus 158 g~af 161 (162)
T d1tkea2 158 GTAW 161 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9998
|
| >d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
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| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
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| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} | Back information, alignment and structure |
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| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
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| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wxqa2 d.15.10.2 (A:320-395) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1zud21 d.15.3.2 (2:2-66) Thiamin biosynthesis sulfur carrier protein ThiS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2cu3a1 d.15.3.2 (A:1-63) Uncharacterised protein TTHA0675 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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