Citrus Sinensis ID: 006890
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 627 | 2.2.26 [Sep-21-2011] | |||||||
| D1ZKF3 | 614 | Probable Xaa-Pro aminopep | N/A | no | 0.950 | 0.970 | 0.459 | 1e-154 | |
| Q7RYL6 | 614 | Probable Xaa-Pro aminopep | N/A | no | 0.948 | 0.969 | 0.453 | 1e-151 | |
| C7Z9Z7 | 619 | Probable Xaa-Pro aminopep | N/A | no | 0.945 | 0.957 | 0.461 | 1e-150 | |
| A4RF35 | 618 | Probable Xaa-Pro aminopep | N/A | no | 0.950 | 0.964 | 0.450 | 1e-149 | |
| A1DF27 | 654 | Probable Xaa-Pro aminopep | N/A | no | 0.950 | 0.911 | 0.449 | 1e-149 | |
| Q6P1B1 | 623 | Xaa-Pro aminopeptidase 1 | yes | no | 0.948 | 0.955 | 0.430 | 1e-149 | |
| A6RK67 | 601 | Probable Xaa-Pro aminopep | N/A | no | 0.929 | 0.970 | 0.452 | 1e-148 | |
| Q4WUD3 | 654 | Probable Xaa-Pro aminopep | yes | no | 0.947 | 0.908 | 0.449 | 1e-148 | |
| B0Y3V7 | 654 | Probable Xaa-Pro aminopep | N/A | no | 0.947 | 0.908 | 0.449 | 1e-148 | |
| B6QG01 | 657 | Probable Xaa-Pro aminopep | N/A | no | 0.952 | 0.908 | 0.443 | 1e-148 |
| >sp|D1ZKF3|AMPP1_SORMK Probable Xaa-Pro aminopeptidase P OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=AMPP PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/629 (45%), Positives = 397/629 (63%), Gaps = 33/629 (5%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
LAALRSLM ++ VVPSED H SEY++ D RR F+SGF+GSAG A++T+++A L
Sbjct: 9 LAALRSLMKERSVDIY--VVPSEDSHASEYITDCDARRTFISGFSGSAGTAVVTLDKAAL 66
Query: 65 WTDGRYFLQATQELTGEWKLMRM-LED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA+++L W L++ L+D P W A+ +G+DP +S A++
Sbjct: 67 ATDGRYFNQASKQLDENWHLLKTGLQDVPTWQEWTADESAGGKTVGIDPTLISPAVAEKL 126
Query: 123 ERAFAKKQQKLVQTST-NLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
K ++ T NLVD VW ++RPP + PV + ++AG EKL +LR++L
Sbjct: 127 NGDIKKHGGSGLKAVTENLVDLVWGESRPPRPSEPVFLLGAKYAGKGAAEKLTDLRKELE 186
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+KA +++ LDE+AWL+N+RG D+ Y PV ++AIVT ++A LYVD+ K++ EV +L
Sbjct: 187 KKKAAAFVVSMLDEIAWLFNLRGNDITYNPVFFSYAIVTKDSATLYVDESKLTDEVKQYL 246
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQ 300
E+G E++ Y + D +L + + + + + + N S+AL L +K + +
Sbjct: 247 AENGTEIKPYTDLFKDTEVLANAAKSTSESEKPTKYLVS--NKASWALKLALGGEKHVDE 304
Query: 301 -QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKE 359
+SP+ AKAIKN EL+G++K HIRDGAA+++Y WL+ Q+
Sbjct: 305 VRSPIGDAKAIKNETELEGMRKCHIRDGAALIKYFAWLEDQLV----------------- 347
Query: 360 KKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDP 419
+ KL EV +D+LE FR+ + F GLSF TISS GPN AI+HY P+ C+ +DP
Sbjct: 348 ---NKKAKLNEVEAADQLEKFRSEQSDFVGLSFDTISSTGPNGAIIHYKPERGACSVIDP 404
Query: 420 NSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTL 479
N+IYLCDSGAQ+ DGTTD+TRT HFG+P+A EK YT VLKG+IAL AVFP GT G L
Sbjct: 405 NAIYLCDSGAQFYDGTTDVTRTLHFGQPTAAEKKSYTLVLKGNIALDTAVFPKGTSGFAL 464
Query: 480 DILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGYY 537
D LAR LWKYGLDYRHGTGHGVGS+LNVHEGP I + +VP+ + EPGYY
Sbjct: 465 DALARQFLWKYGLDYRHGTGHGVGSFLNVHEGPIGIGTRKAYIDVPLAPGNVLSIEPGYY 524
Query: 538 EDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNA 597
EDGN+GIR+EN+ +V + T+ FGDK YL FEHIT PY K+I+ LT EE DWLN
Sbjct: 525 EDGNYGIRIENLAIVREVKTEHQFGDKPYLGFEHITMVPYCRKLIDESLLTQEEKDWLNK 584
Query: 598 YHSKCRDILAPYLDEAELA--WLKKATEP 624
+ + R +A Y D +L WL + T P
Sbjct: 585 SNEEIRKNMAGYFDGDQLTTDWLLRETSP 613
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Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) (taxid: 771870) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 9 |
| >sp|Q7RYL6|AMPP1_NEUCR Probable Xaa-Pro aminopeptidase P OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/630 (45%), Positives = 395/630 (62%), Gaps = 35/630 (5%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
LAALRSLM + ++ VVPSED H SEY++ D RR F+SGFTGSAG A++T+++A L
Sbjct: 9 LAALRSLMKERNVDIY--VVPSEDSHASEYIAECDARRAFISGFTGSAGTAVVTLDKAAL 66
Query: 65 WTDGRYFLQATQELTGEWKLMRM-LED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA+++L W L++ L+D P W A+ ++G+DP +S A +
Sbjct: 67 ATDGRYFNQASKQLDENWHLLKTGLQDVPTWQEWTADESAGGKSVGIDPTLISPAVADKL 126
Query: 123 ERAFAKKQ-QKLVQTSTNLVDKVWKN-RPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
+ K L + NLVD VW + RPP + PV + +++G EKL LR++L
Sbjct: 127 DGDIKKHGGAGLKAINENLVDLVWGDSRPPRPSEPVFLLGAKYSGKGTAEKLTNLRKELE 186
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+KA +++ LDEVAWL+N+RG D+ Y PV ++AIVT ++A LYVD+ K++ EV +L
Sbjct: 187 KKKAAAFVVSMLDEVAWLFNLRGNDITYNPVFFSYAIVTKDSATLYVDESKLNDEVKQYL 246
Query: 241 KESGVEVRDYDAVSSDV-VLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLL 299
E+G ++ Y+ + D +L + + +D L+ N S+AL L +K +
Sbjct: 247 AENGTGIKPYNDLFKDTEILANAAKSTSESDKPTKYLV---SNKASWALKLALGGEKHVD 303
Query: 300 Q-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATK 358
+ +SP+ AKAIKN EL+G+++ HIRDGAA+++Y WL+ Q+
Sbjct: 304 EVRSPIGDAKAIKNETELEGMRRCHIRDGAALIKYFAWLEDQLI---------------- 347
Query: 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMD 418
+ KL EV +D+LE FR+ + F GLSF TISS GPN AI+HY P+ C+ +D
Sbjct: 348 ----NKKAKLDEVEAADQLEQFRSEQADFVGLSFDTISSTGPNGAIIHYKPERGACSVID 403
Query: 419 PNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHT 478
P++IYLCDSGAQ+ DGTTD+TRT HFG+P+ E+ YT VLKG+IAL AVFP GT G
Sbjct: 404 PDAIYLCDSGAQFCDGTTDVTRTLHFGQPTDAERKSYTLVLKGNIALDTAVFPKGTSGFA 463
Query: 479 LDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGY 536
LD LAR LWKYGLDYRHGTGHGVGS+LNVHEGP I + +VP+ + EPGY
Sbjct: 464 LDALARQFLWKYGLDYRHGTGHGVGSFLNVHEGPIGIGTRKAYIDVPLAPGNVLSIEPGY 523
Query: 537 YEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLN 596
YEDGN+GIR+EN+ +V + T+ FGDK YL FEH+T PY K+I+ LT EE DWLN
Sbjct: 524 YEDGNYGIRIENLAIVREVKTEHQFGDKPYLGFEHVTMVPYCRKLIDESLLTQEEKDWLN 583
Query: 597 AYHSKCRDILAPYLDEAELA--WLKKATEP 624
+ + R +A Y D +L WL + T P
Sbjct: 584 KSNEEIRKNMAGYFDGDQLTTEWLLRETSP 613
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Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|C7Z9Z7|AMPP1_NECH7 Probable Xaa-Pro aminopeptidase P OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=AMPP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 532 bits (1371), Expect = e-150, Method: Compositional matrix adjust.
Identities = 291/631 (46%), Positives = 384/631 (60%), Gaps = 38/631 (6%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
L +LR M + + ++PSED H SEY++ D RRE +SGFTGSAG A++T+ A L
Sbjct: 10 LTSLRGFMKERN--VQVYIIPSEDSHSSEYIADCDARREHISGFTGSAGCAVVTLETAAL 67
Query: 65 WTDGRYFLQATQELTGEWKLMRM-LED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA +L W L++ L+D P W A +GVDP +S TA+
Sbjct: 68 ATDGRYFNQAAAQLDSNWTLLKQGLQDVPTWQEWSAEQSSGGKNVGVDPSLISGATAKNL 127
Query: 123 ERAFAKKQ-QKLVQTSTNLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
K +LV NLVD VW K RP + V VQ E AG SV KL +LR++L
Sbjct: 128 AEKIRKSGGAELVPIEGNLVDLVWGKERPARPSEKVIVQPDELAGESVTNKLTKLRQELE 187
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+++ G +++ LDE+AWL+N+RG D+P+ PV ++AIVT + A LY+D K+ + S L
Sbjct: 188 KKRSPGFLVSMLDEIAWLFNLRGNDIPFNPVFFSYAIVTPDVATLYIDDSKLDDKCRSHL 247
Query: 241 KESGVEVRDYDAVSSDVVLLQSN----QLNPPADVQGSDLIWADPNSCSYALYSKLNSDK 296
+ VE++ YD++ D L ++ + A G+ LI N S+AL L D
Sbjct: 248 SANKVEIKPYDSILDDARKLHASVSEKGKSENAAPTGNFLI---SNKGSWALKRALGGDS 304
Query: 297 VLLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGE 355
+ + +SP+ AKAIK+ EL G++ H+RDGAA++QY WL+ Q+ + +
Sbjct: 305 SVDEIRSPVGDAKAIKSEAELVGMRACHVRDGAALIQYFAWLEDQL----------VNKK 354
Query: 356 ATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCA 415
AT L EV +DKLE R+ K F GLSFPTISS G NAAI+HY P+ +CA
Sbjct: 355 AT----------LDEVEAADKLEELRSQKSDFVGLSFPTISSTGANAAIIHYGPERGSCA 404
Query: 416 EMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTC 475
+DP +IYLCDSGAQY DGTTD TRT HFG P+ E+ YT VLKGHIAL AVFP GT
Sbjct: 405 TIDPEAIYLCDSGAQYHDGTTDTTRTLHFGTPTEAEREAYTLVLKGHIALDQAVFPKGTT 464
Query: 476 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDE 533
G LD LAR LWK GLDYRHGTGHGVGS+LNVHEGP I + + V + ++E
Sbjct: 465 GFALDGLARQHLWKNGLDYRHGTGHGVGSFLNVHEGPIGIGTRVQFAEVALAPGNVLSNE 524
Query: 534 PGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEID 593
PGYYEDG +GIR+EN++VV + TK FGDK +L FEH+T PY +I+ K LT EE +
Sbjct: 525 PGYYEDGKYGIRIENIVVVKEIKTKHKFGDKPFLGFEHVTMVPYCRNLIDTKLLTSEEKE 584
Query: 594 WLNAYHSKCRDILAPYL--DEAELAWLKKAT 622
WLNAY++K D Y D+ LAWLK+ T
Sbjct: 585 WLNAYNAKVVDKTQGYFEGDDVTLAWLKRET 615
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Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) (taxid: 660122) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|A4RF35|AMPP1_MAGO7 Probable Xaa-Pro aminopeptidase P OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=AMPP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/632 (45%), Positives = 393/632 (62%), Gaps = 36/632 (5%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
LA LR LM + + +VP+ED H SEY++ D RREF+SGF+GSAG A++T ++A L
Sbjct: 10 LAELRGLMRARS--IDVYIVPTEDAHSSEYIAPCDGRREFISGFSGSAGTAVVTNDKAAL 67
Query: 65 WTDGRYFLQATQELTGEWKLMRMLED--PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA EL W+L++ + P W A+ +GVDP +S A+
Sbjct: 68 ATDGRYFNQAATELDNNWELLKQGQPDVPTWQEWTADQAAGGKTVGVDPTLLSSSEAKAL 127
Query: 123 -ERAFAKKQQKLVQTSTNLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
E+ +K LV S NLVD VW +++P + P+ +++G KLKELRE L
Sbjct: 128 QEKIKSKGGNDLVAISDNLVDLVWGRHKPSRPSNPIAFLPKKYSGKDTEPKLKELREVLE 187
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+K G +I+TLDE+AWL+N+RG+D+PY PV ++A+VT + A LYVD K+S E ++L
Sbjct: 188 KKKVFGFVISTLDEIAWLFNLRGSDIPYNPVFFSYAVVTADNATLYVDASKLSEESHAYL 247
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSD---LIWADPNSCSYALYSKLNSDKV 297
KE+ V++R Y+++ D +L + L P D QG + A N S+AL L D
Sbjct: 248 KENKVDIRPYESIFEDSEVL-AKSLKPTED-QGEESKVKKLAISNKTSWALKLALGGDGA 305
Query: 298 LLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEA 356
+ + +SP+ AKAIKN EL+G+++ HIRDGAA+++Y WL+ Q+ A
Sbjct: 306 VDEIKSPVCDAKAIKNETELEGMRQCHIRDGAALIEYFAWLEDQV--------------A 351
Query: 357 TKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAE 416
K+ L EV + KLE+ RA E F GLSF TIS+VG NAA++HY P+ ++CA
Sbjct: 352 NKK------ATLNEVQAATKLENLRAKHEDFVGLSFTTISAVGANAAVIHYKPEEDSCAT 405
Query: 417 MDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCG 476
+D +S+YLCDSGAQ+ DGTTD TRT HFGKPS E+ YT VLKG++AL A+FP GT G
Sbjct: 406 IDADSVYLCDSGAQFLDGTTDTTRTLHFGKPSEAERKAYTLVLKGNMALDMAIFPKGTTG 465
Query: 477 HTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEP 534
LD AR LW+ GLDYRHGTGHGVGSYLNVHEGP I + VP+ + EP
Sbjct: 466 FALDPFARQFLWQEGLDYRHGTGHGVGSYLNVHEGPIGIGTRKHYAGVPLAPGNVTSIEP 525
Query: 535 GYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDW 594
G+YEDG++GIR+EN+ ++ + TK FGDK YL FEH+T PY ++I+ LTP E W
Sbjct: 526 GFYEDGSYGIRIENIAMIREVETKHMFGDKPYLGFEHVTMVPYCRRLIDESLLTPREKQW 585
Query: 595 LNAYHSKCRDILAPYL--DEAELAWLKKATEP 624
LN Y+ D + + D +AWL++ T+P
Sbjct: 586 LNDYNKLILDKTSGFFKDDNLTMAWLERETQP 617
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Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|A1DF27|AMPP1_NEOFI Probable Xaa-Pro aminopeptidase P OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/630 (44%), Positives = 385/630 (61%), Gaps = 34/630 (5%)
Query: 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEA 62
E LA LR LM H + +VPSED HQSEY++ D RREF+SGF+GSAG A+++M +A
Sbjct: 48 ERLARLRQLMQEHK--VDVYIVPSEDSHQSEYIAPCDGRREFISGFSGSAGTAIVSMTKA 105
Query: 63 LLWTDGRYFLQATQELTGEWKLM-RMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
L TDGRYF QA+++L W+L+ R +E+ P W +GVDP ++ A+
Sbjct: 106 ALSTDGRYFNQASKQLDSNWELLKRGVENVPTWQEWTTEQAEGGKVVGVDPSLITASGAR 165
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKL 179
E + LV S NLVD VW K+RP V V +FAG + EK+ +LR++L
Sbjct: 166 SLEETLKRNGSSLVGISQNLVDLVWGKDRPAPPREKVRVHPDKFAGKTFQEKIADLRKEL 225
Query: 180 TNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISF 239
+K G +I+ LDE+AWL+N+RG+D+PY PV A+AI+T A LY+D K++ EV++
Sbjct: 226 EKKKTAGFVISMLDEIAWLFNLRGSDIPYNPVFFAYAIITPTKAELYIDDDKITPEVVAH 285
Query: 240 LKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDK-VL 298
L + V ++ Y+++ +D L + + L+ N S+AL L ++ V
Sbjct: 286 LGQD-VVIKPYNSIFADAKALSEARKQEAGETASKFLL---SNKASWALSLSLGGEEHVE 341
Query: 299 LQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATK 358
+SP+A AKAIKN VEL G++ HIRDGAA+++Y WL+ ++
Sbjct: 342 ETRSPIADAKAIKNEVELAGMRACHIRDGAALIEYFAWLENELV---------------- 385
Query: 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMD 418
+ TV L EV +DKLE R + F GLSF TISS GPN A++HY P+ TC+ +D
Sbjct: 386 ---NKKTV-LDEVDAADKLERIRTKHDLFAGLSFDTISSTGPNGAVIHYKPEKGTCSIID 441
Query: 419 PNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHT 478
P++IYLCDSGAQY DGTTD+TRTFHFGKP+ EK +T VLKG IA+ AVFP GT G
Sbjct: 442 PDAIYLCDSGAQYLDGTTDVTRTFHFGKPTELEKKAFTLVLKGLIAIDTAVFPKGTSGFA 501
Query: 479 LDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGY 536
LD LAR LWK GLDY HGTGHG+GSYLNVHEGP I + + VPI +DEPG+
Sbjct: 502 LDALARQYLWKEGLDYLHGTGHGIGSYLNVHEGPIGIGTRVQYTEVPIAPGNVISDEPGF 561
Query: 537 YEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLN 596
YEDG FGIR+ENV++ + T FGDK +L FEH+T AP +I L+ E+ W+N
Sbjct: 562 YEDGKFGIRIENVIMAREVQTTHKFGDKPWLGFEHVTMAPIGRNLIQPSLLSDLELKWVN 621
Query: 597 AYHSKCRDILAPYL--DEAELAWLKKATEP 624
YH++ D + DE +WL++ T P
Sbjct: 622 DYHAEVWDKTHHFFENDEFTRSWLQRETAP 651
|
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|Q6P1B1|XPP1_MOUSE Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/644 (43%), Positives = 390/644 (60%), Gaps = 49/644 (7%)
Query: 2 AEILAALRSLMSSHD---PPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT 58
+E+L LR M + + P+ A ++PS D HQSEY++ D RR FVSGF GSAG A+IT
Sbjct: 7 SELLRQLRQAMRNSEYVAEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIIT 66
Query: 59 MNEALLWTDGRYFLQATQELTGEWKLMRM-LED-PAVDVWMANNLPNDAAIGVDPWCVSI 116
A +WTDGRYFLQA +++ W LM+M L+D P + W+ + LP + +GVDP +
Sbjct: 67 EEHAAMWTDGRYFLQAAKQMDNNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPT 126
Query: 117 DTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELR 176
D ++ + LV NLVDK+W +RP P+ +++ G S EK+ +LR
Sbjct: 127 DYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKEKVADLR 186
Query: 177 EKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEV 236
K+ ++T LDE+AWL+N+RG+DV + PV ++AIV L++D +V +
Sbjct: 187 LKMAERSIAWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIVGLETIMLFIDGDRVDAPG 246
Query: 237 IS--FLKESGVE------VRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYAL 288
+ L + G+E V Y ++ S++ L AD+ + +W + SYA+
Sbjct: 247 VKQHLLLDLGLEAEYRIQVLPYKSILSELKALC-------ADLSPREKVWVS-DKASYAV 298
Query: 289 YSKLNSD-KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGA 347
+ D + + +P+ +AKA+KN E DG+++AHI+D A+ + WL++++ +
Sbjct: 299 SEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNWLEQEVPK---- 354
Query: 348 SGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHY 407
G V TE++ +DK E FR + F LSFPTISS GPN AI+HY
Sbjct: 355 ----------------GGV--TEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHY 396
Query: 408 SPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGN 467
+P ET + + +YL DSGAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+
Sbjct: 397 APVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSA 456
Query: 468 AVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHA 526
AVFP GT GH LD AR LW GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A
Sbjct: 457 AVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEA 516
Query: 527 SMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKS 586
M TDEPGYYEDG FGIR+ENV++V A TK+NF ++G L+FE +T P Q KMI++ +
Sbjct: 517 GMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNA 576
Query: 587 LTPEEIDWLNAYHSKCRDILAPYLD----EAELAWLKKATEPAS 626
LT +E DWLN+YH CRD++ L + L WL + TEP S
Sbjct: 577 LTDKECDWLNSYHQTCRDVVGKELQSQGRQEALEWLIRETEPVS 620
|
Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|A6RK67|AMPP1_BOTFB Probable Xaa-Pro aminopeptidase P OS=Botryotinia fuckeliana (strain B05.10) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/632 (45%), Positives = 392/632 (62%), Gaps = 49/632 (7%)
Query: 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEA 62
E LA LR LM + ++ +VPSED H SEY++A D RREF+SGF+GSAG A++T+ +A
Sbjct: 8 ERLAGLRELMKKNKVDIY--IVPSEDSHSSEYIAACDARREFISGFSGSAGCAVVTLEKA 65
Query: 63 LLWTDGRYFLQATQELTGEWKLMRMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQR 121
L TD + L L + L+D P W A N +GVDP +S A++
Sbjct: 66 ALATDDNWLL-----------LKQGLQDVPTWQEWAAEQSENGKVVGVDPTIMSASDARK 114
Query: 122 WERAFAKKQ-QKLVQTSTNLVDKVWKN-RPPVETYPVTVQQIEFAGSSVVEKLKELREKL 179
K+ LV NLVD VW + RP PV V +FAG V KL++LR++L
Sbjct: 115 LTEKIKKRGGNDLVAVEENLVDLVWGDSRPSRPKEPVKVLARKFAGKDVKTKLEDLRKEL 174
Query: 180 TNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISF 239
+K+ G+I++ LDE+AWL+N+RG D+PY PV ++A VT+++A LYVD K+S E +
Sbjct: 175 LKKKSSGLIVSMLDEIAWLFNLRGNDIPYNPVFFSYASVTSSSATLYVDSSKLSDECTAH 234
Query: 240 LKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD-KVL 298
L E+GV VRDY + D +L +Q D + + + + S+AL L D KV
Sbjct: 235 LNENGVSVRDYSKIFGDAEVL--SQSLDAEDTKVKKFLVS--SRASWALKRALGGDAKVD 290
Query: 299 LQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATK 358
+SP+ AK++KN EL+G++ H+RDGAA+++Y WL+ Q+
Sbjct: 291 EVRSPIGDAKSVKNETELEGMRACHVRDGAALIEYFAWLEHQL---------------VV 335
Query: 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMD 418
EK VK+ EVT +D+LE R+ +++F GLSF TISS GPNAA++HY P+ C+ +D
Sbjct: 336 EK-----VKMDEVTAADRLEQLRSKQKNFVGLSFDTISSTGPNAAVIHYKPEPGNCSIID 390
Query: 419 PNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHT 478
PN++YLCDSGAQY DGTTD TRT HFG+P+ EK YT VLKG+IAL A+FP GT G
Sbjct: 391 PNAVYLCDSGAQYFDGTTDTTRTLHFGEPTEMEKKAYTLVLKGNIALDVAIFPKGTSGFA 450
Query: 479 LDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGY 536
LD+LAR LW+ GLDYRHGTGHGVGS+LNVHEGP I + + VP+ ++EPGY
Sbjct: 451 LDVLARQFLWEEGLDYRHGTGHGVGSFLNVHEGPIGIGTRIQYSEVPLAPGNVISNEPGY 510
Query: 537 YEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLN 596
YEDG+FGIR+EN+++V + TK FG+K YL FEH+T PY K+I+ LT +E WLN
Sbjct: 511 YEDGSFGIRIENIIMVKEIETKHQFGEKPYLGFEHVTMVPYCRKLIDETLLTRKEKHWLN 570
Query: 597 AYH----SKCRDILAPYLDEAELAWLKKATEP 624
YH SK +D DE ++WL++ EP
Sbjct: 571 EYHADIYSKTKDFFKG--DELTMSWLEREIEP 600
|
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Botryotinia fuckeliana (strain B05.10) (taxid: 332648) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|Q4WUD3|AMPP1_ASPFU Probable Xaa-Pro aminopeptidase P OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/628 (44%), Positives = 384/628 (61%), Gaps = 34/628 (5%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
LA LR LM H + +VPSED HQSEY++ D RREF+SGF+GSAG A+++M +A L
Sbjct: 50 LARLRQLMQEHK--IDVYIVPSEDSHQSEYIAPCDGRREFISGFSGSAGTAIVSMTKAAL 107
Query: 65 WTDGRYFLQATQELTGEWKLM-RMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA+++L W+L+ R +E+ P W +GVDP ++ A+
Sbjct: 108 STDGRYFNQASKQLDSNWELLKRGVENVPTWQEWTTEQAQGGKVVGVDPALITASGARSL 167
Query: 123 ERAFAKKQQKLVQTSTNLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTN 181
E + LV S NLVD VW K+RP V V +F+G + EK+ +LR++L
Sbjct: 168 EETLKRNGSSLVGISQNLVDLVWGKDRPAPPREKVRVHPDKFSGKTFQEKIADLRKELEK 227
Query: 182 EKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241
+K G +I+ LDE+AWL+N+RG+D+PY PV A+AI+T A LY+D K++ EV++ L
Sbjct: 228 KKTAGFVISMLDEIAWLFNLRGSDIPYNPVFFAYAIITPTKAELYIDDDKITPEVVAHLG 287
Query: 242 ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDK-VLLQ 300
+ V ++ Y+++ +D L + + L+ N S+AL L ++ V
Sbjct: 288 QD-VVIKPYNSIFADAKALSEARRKEAGETASKFLL---SNKASWALSLSLGGEEHVEET 343
Query: 301 QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEK 360
+SP+A AKAIKN VEL G++ HIRDGAA+++Y WL+ ++
Sbjct: 344 RSPIADAKAIKNEVELAGMRACHIRDGAALIEYFAWLENELV------------------ 385
Query: 361 KHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPN 420
+ TV L EV +DKLE R + F GLSF TISS GPN A++HY P+ TC+ +DP+
Sbjct: 386 -NKKTV-LDEVDAADKLEQIRTKHDLFAGLSFDTISSTGPNGAVIHYKPEKGTCSIIDPD 443
Query: 421 SIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLD 480
+IYLCDSGAQY DGTTD+TRTFHFGKP+ EK +T VLKG IA+ AVFP GT G LD
Sbjct: 444 AIYLCDSGAQYLDGTTDVTRTFHFGKPTELEKKAFTLVLKGLIAIDTAVFPKGTSGFALD 503
Query: 481 ILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGYYE 538
LAR LWK GLDY HGTGHGVGSYLNVHEGP I + + VPI +DEPG+YE
Sbjct: 504 ALARQYLWKEGLDYLHGTGHGVGSYLNVHEGPIGIGTRVQYTEVPIAPGNVISDEPGFYE 563
Query: 539 DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAY 598
DG FGIR+ENV++ + T FGDK +L FEH+T AP +I L+ E+ W+N Y
Sbjct: 564 DGKFGIRIENVIMAREVQTTHKFGDKPWLGFEHVTMAPIGRNLIEPSLLSDLELKWVNDY 623
Query: 599 HSKCRDILAPYL--DEAELAWLKKATEP 624
H++ D + DE +WL++ T P
Sbjct: 624 HAEVWDKTHHFFENDEFTRSWLQRETAP 651
|
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|B0Y3V7|AMPP1_ASPFC Probable Xaa-Pro aminopeptidase P OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/628 (44%), Positives = 384/628 (61%), Gaps = 34/628 (5%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
LA LR LM H + +VPSED HQSEY++ D RREF+SGF+GSAG A+++M +A L
Sbjct: 50 LARLRQLMQEHK--IDVYIVPSEDSHQSEYIAPCDGRREFISGFSGSAGTAIVSMTKAAL 107
Query: 65 WTDGRYFLQATQELTGEWKLM-RMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
TDGRYF QA+++L W+L+ R +E+ P W +GVDP ++ A+
Sbjct: 108 STDGRYFNQASKQLDSNWELLKRGVENVPTWQEWTTEQAQGGKVVGVDPALITASGARSL 167
Query: 123 ERAFAKKQQKLVQTSTNLVDKVW-KNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTN 181
E + LV S NLVD VW K+RP V V +F+G + EK+ +LR++L
Sbjct: 168 EETLKRNGSSLVGISQNLVDLVWGKDRPAPPREKVRVHPDKFSGKTFQEKIADLRKELEK 227
Query: 182 EKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241
+K G +I+ LDE+AWL+N+RG+D+PY PV A+AI+T A LY+D K++ EV++ L
Sbjct: 228 KKTAGFVISMLDEIAWLFNLRGSDIPYNPVFFAYAIITPTKAELYIDDDKITPEVVAHLG 287
Query: 242 ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDK-VLLQ 300
+ V ++ Y+++ +D L + + L+ N S+AL L ++ V
Sbjct: 288 QD-VVIKPYNSIFADAKALSEARRKEAGETASKFLL---SNKASWALSLSLGGEEHVEET 343
Query: 301 QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEK 360
+SP+A AKAIKN VEL G++ HIRDGAA+++Y WL+ ++
Sbjct: 344 RSPIADAKAIKNEVELAGMRACHIRDGAALIEYFAWLENELV------------------ 385
Query: 361 KHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPN 420
+ TV L EV +DKLE R + F GLSF TISS GPN A++HY P+ TC+ +DP+
Sbjct: 386 -NKKTV-LDEVDAADKLEQIRTKHDLFAGLSFDTISSTGPNGAVIHYKPEKGTCSIIDPD 443
Query: 421 SIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLD 480
+IYLCDSGAQY DGTTD+TRTFHFGKP+ EK +T VLKG IA+ AVFP GT G LD
Sbjct: 444 AIYLCDSGAQYLDGTTDVTRTFHFGKPTELEKKAFTLVLKGLIAIDTAVFPKGTSGFALD 503
Query: 481 ILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGYYE 538
LAR LWK GLDY HGTGHGVGSYLNVHEGP I + + VPI +DEPG+YE
Sbjct: 504 ALARQYLWKEGLDYLHGTGHGVGSYLNVHEGPIGIGTRVQYTEVPIAPGNVISDEPGFYE 563
Query: 539 DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAY 598
DG FGIR+ENV++ + T FGDK +L FEH+T AP +I L+ E+ W+N Y
Sbjct: 564 DGKFGIRIENVIMAREVQTTHKFGDKPWLGFEHVTMAPIGRNLIEPSLLSDLELKWVNDY 623
Query: 599 HSKCRDILAPYL--DEAELAWLKKATEP 624
H++ D + DE +WL++ T P
Sbjct: 624 HAEVWDKTHHFFENDEFTRSWLQRETAP 651
|
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
| >sp|B6QG01|AMPP1_PENMQ Probable Xaa-Pro aminopeptidase P OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=ampp PE=3 SV=1 | Back alignment and function description |
|---|
Score = 525 bits (1352), Expect = e-148, Method: Compositional matrix adjust.
Identities = 280/631 (44%), Positives = 380/631 (60%), Gaps = 34/631 (5%)
Query: 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNE 61
+E L LR LM ++ L +VPSED HQSEY++ D RREF+SGFTGSAG A+I+
Sbjct: 51 SERLVQLRELMKRNN--LDVYIVPSEDSHQSEYIAHCDARREFISGFTGSAGTAVISSTA 108
Query: 62 ALLWTDGRYFLQATQELTGEWKLM-RMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTA 119
A L TDGRYF QA ++L W L+ R LE P W +GVDP ++ +A
Sbjct: 109 AALSTDGRYFNQAAKQLDSNWTLLKRGLEGVPTWQEWTTEQAEGGKTVGVDPSVITAASA 168
Query: 120 QRWERAFAKKQQKLVQTSTNLVDKVWKN-RPPVETYPVTVQQIEFAGSSVVEKLKELREK 178
++ K KL+ NLVD++W + RP V + E+AG EK+ +LR++
Sbjct: 169 RKLSETLEKSGSKLIGIEQNLVDQIWGDKRPARPNETVKIHPAEYAGKPFQEKIADLRKE 228
Query: 179 LTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238
L +K G I++ LDE+AWL+N+RG D+PY PV ++A++T LY++ K+S EV +
Sbjct: 229 LKTKKRAGFIVSVLDEIAWLFNLRGNDIPYNPVFFSYAVITPETVDLYINDEKLSPEVKA 288
Query: 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVL 298
L S V V+ Y+++ +D L +N P GS + + N S+AL +K L
Sbjct: 289 HLG-SDVVVKPYESIFADARALS---VNAPLTENGSPMKYLTSNKASWALSLSFGGEKKL 344
Query: 299 LQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEAT 357
+ +SP++ AKAIKN VEL G++ HIRDGAA+ +Y WL+ ++
Sbjct: 345 DEARSPISDAKAIKNEVELKGMRNCHIRDGAALSEYFAWLENELIN-------------- 390
Query: 358 KEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEM 417
KK + L EV +DKLE R+ + F GLSF TISS GPNAA++HY P+ C+ +
Sbjct: 391 --KKST----LDEVDGADKLEQIRSKHDKFVGLSFDTISSTGPNAAVIHYKPEKGICSVI 444
Query: 418 DPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGH 477
DPN+IYLCDSG QY DGTTD TRTFHFG P+ EK +T VLKG IAL AVFP GT G
Sbjct: 445 DPNAIYLCDSGGQYLDGTTDTTRTFHFGTPTEMEKKAFTLVLKGLIALDTAVFPKGTSGF 504
Query: 478 TLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPG 535
LD LAR LW+YGLDY HGTGHGVG+YLNVHEGP + + + V + +DEPG
Sbjct: 505 ALDALARQHLWRYGLDYLHGTGHGVGAYLNVHEGPIGVGTRIQYSEVSLSPGNVISDEPG 564
Query: 536 YYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWL 595
YYEDG FGIR+EN+++ + T + FG+K +L FEH+T P +I L+ EE W+
Sbjct: 565 YYEDGKFGIRIENIIMAREVETPYKFGEKSWLGFEHVTMTPIGQNLIETSLLSEEERQWV 624
Query: 596 NAYHSKCRDILAPYL--DEAELAWLKKATEP 624
N YH++ + + Y DE L WLKK T+P
Sbjct: 625 NNYHAEVWEKTSGYFKQDELTLNWLKKETKP 655
|
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) (taxid: 441960) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 627 | ||||||
| 225430834 | 642 | PREDICTED: probable Xaa-Pro aminopeptida | 0.998 | 0.975 | 0.769 | 0.0 | |
| 255568255 | 647 | xaa-pro aminopeptidase, putative [Ricinu | 1.0 | 0.969 | 0.766 | 0.0 | |
| 224096938 | 645 | predicted protein [Populus trichocarpa] | 0.995 | 0.967 | 0.758 | 0.0 | |
| 357483307 | 655 | Xaa-Pro aminopeptidase [Medicago truncat | 0.998 | 0.955 | 0.733 | 0.0 | |
| 356538129 | 657 | PREDICTED: probable Xaa-Pro aminopeptida | 1.0 | 0.954 | 0.733 | 0.0 | |
| 449451497 | 657 | PREDICTED: probable Xaa-Pro aminopeptida | 1.0 | 0.954 | 0.732 | 0.0 | |
| 356496787 | 657 | PREDICTED: probable Xaa-Pro aminopeptida | 1.0 | 0.954 | 0.722 | 0.0 | |
| 346229123 | 657 | Xaa-Pro aminopeptidase 2 [Glycine max] | 1.0 | 0.954 | 0.722 | 0.0 | |
| 350535118 | 655 | Xaa-Pro aminopeptidase 1 [Solanum lycope | 1.0 | 0.957 | 0.723 | 0.0 | |
| 350535316 | 654 | Xaa-Pro aminopeptidase 2 [Solanum lycope | 1.0 | 0.958 | 0.715 | 0.0 |
| >gi|225430834|ref|XP_002273246.1| PREDICTED: probable Xaa-Pro aminopeptidase P [Vitis vinifera] gi|297735202|emb|CBI17564.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/641 (76%), Positives = 566/641 (88%), Gaps = 15/641 (2%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA+ILAALRSLM+SH PPL AL VPSEDYHQSEYVSARDKRR FVSGFTGSAGLALITMN
Sbjct: 1 MADILAALRSLMASHSPPLDALAVPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITMN 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EA LWTDGRYFLQA+QEL+ +WKLMR+ EDP VD+WMA+NLPN+AA+G+DPWC+S+DTAQ
Sbjct: 61 EARLWTDGRYFLQASQELSDQWKLMRLGEDPGVDIWMADNLPNNAAVGIDPWCISVDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWERAF KK+QKLVQTSTNLVD+VWKNRPP ET PV +Q +EFAG SV +KL++LRE+L
Sbjct: 121 RWERAFTKKRQKLVQTSTNLVDEVWKNRPPAETNPVIIQPVEFAGRSVADKLEDLRERLM 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
EKA+GIIIT LDEVAWLYN+RGTDV YCPVVHAFAIVT+ +AF YVDK+KVSSEV S +
Sbjct: 181 QEKAQGIIITALDEVAWLYNVRGTDVSYCPVVHAFAIVTSKSAFFYVDKKKVSSEVNSHM 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPP--ADVQGSDL----------IWADPNSCSYAL 288
+E+G+EVR+Y VSSDV LL SNQL P D+ +D+ IW DP SC YAL
Sbjct: 241 EENGIEVREYGEVSSDVALLASNQLRPSPVTDITENDINEEEEKTCGFIWVDPGSCCYAL 300
Query: 289 YSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGAS 348
YSKL+SDKV+LQQSPLA+AKAIKNPVELDGL+KAHIRDGAA+VQY++WLDKQMQE YGA+
Sbjct: 301 YSKLDSDKVVLQQSPLAIAKAIKNPVELDGLRKAHIRDGAAVVQYLVWLDKQMQENYGAA 360
Query: 349 GYFLEGEATKEKKHSG-TVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHY 407
GYFLE E+ +K+ S T+KLTEV+ SDKLESFRASKEHFRGLSFPTISSVGPNAAI+HY
Sbjct: 361 GYFLEVESKNKKQQSSETMKLTEVSASDKLESFRASKEHFRGLSFPTISSVGPNAAIIHY 420
Query: 408 SPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGN 467
SP +ETC+E+DP+SIYL DSGAQYQDGTTDITRT HFGKPS+HEKACYTAVLKGHI+LGN
Sbjct: 421 SPDAETCSELDPDSIYLFDSGAQYQDGTTDITRTVHFGKPSSHEKACYTAVLKGHISLGN 480
Query: 468 AVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFK--PRNVPIH 525
A FP+GT GHTLDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP ISF+ R+VP+
Sbjct: 481 ARFPSGTAGHTLDILARVPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRTPARHVPLQ 540
Query: 526 ASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLK 585
ASMT TDEPGYYEDGNFGIRLENVLV+ +A+TKFNFGDKGYL+FEHITWAPYQ K+I+
Sbjct: 541 ASMTVTDEPGYYEDGNFGIRLENVLVIKEADTKFNFGDKGYLAFEHITWAPYQKKLIDQS 600
Query: 586 SLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPAS 626
LTPEEI+W+N+YHS CRDILAPYLDE+E+AWLK++TEP S
Sbjct: 601 LLTPEEIEWVNSYHSTCRDILAPYLDESEMAWLKRSTEPLS 641
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568255|ref|XP_002525102.1| xaa-pro aminopeptidase, putative [Ricinus communis] gi|223535561|gb|EEF37229.1| xaa-pro aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/647 (76%), Positives = 556/647 (85%), Gaps = 20/647 (3%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA++L +LRSLMSSH PPL ALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT N
Sbjct: 1 MADLLTSLRSLMSSHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITKN 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EA LWTDGRYFLQATQ+L+ +W LMR+ EDP+VD WMA+NLP +A++GVDPWCVS+DTAQ
Sbjct: 61 EARLWTDGRYFLQATQQLSDQWILMRIGEDPSVDTWMADNLPANASVGVDPWCVSVDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWE AFA+K+QKLVQT+TNLVD+VWKNRPP ET PV V +EF G SV +KLK LR KL
Sbjct: 121 RWEGAFAEKKQKLVQTATNLVDEVWKNRPPAETNPVVVHPLEFTGRSVADKLKNLRVKLK 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+EKA G+II TLDEVAWLYNIRG DV YCPVVHAFAIVT+N+AFLYVDKRKVS+EV S+L
Sbjct: 181 HEKACGMIIATLDEVAWLYNIRGNDVSYCPVVHAFAIVTSNSAFLYVDKRKVSTEVSSYL 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQL----------------NPPADVQGS--DLIWADPN 282
+++ +EVR+Y AVS D VLL S++L N A+ +G D IW DP
Sbjct: 241 EDNEIEVREYTAVSPDAVLLASDKLHSSVVKGNSSETDVSRNDTAEPEGKKIDFIWVDPG 300
Query: 283 SCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQ 342
SC YALYSKLNS+KVLL+QSPLALAKA+KNP+ELDGLKKAHIRDGAA+VQY++WLDKQMQ
Sbjct: 301 SCCYALYSKLNSEKVLLKQSPLALAKALKNPIELDGLKKAHIRDGAAVVQYLVWLDKQMQ 360
Query: 343 EIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNA 402
EIYGASGYFLEGE+ +KK T KLTEVTVSDKLE FRASKEHFRGLSFPTISSVGPNA
Sbjct: 361 EIYGASGYFLEGESANKKKDMETRKLTEVTVSDKLEGFRASKEHFRGLSFPTISSVGPNA 420
Query: 403 AIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462
AI+HYSPQ+E+CAE+DP SIYL DSGAQY DGTTDITRT HFGKPSAHEKACYTAVLKGH
Sbjct: 421 AIIHYSPQAESCAELDPKSIYLFDSGAQYLDGTTDITRTVHFGKPSAHEKACYTAVLKGH 480
Query: 463 IALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP--R 520
IALGNA FPNGT GH LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP ISF+P R
Sbjct: 481 IALGNARFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPHAR 540
Query: 521 NVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIK 580
NVP+ ASMT TDEPGYYEDG+FGIRLENVL+V D T FNFG+KGYLSFEHITWAPYQ K
Sbjct: 541 NVPLQASMTVTDEPGYYEDGSFGIRLENVLIVKDGKTPFNFGEKGYLSFEHITWAPYQNK 600
Query: 581 MINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
+I++ L P+EIDWLN YHS+CRDILAPYLDE+E AWLKKATEP A
Sbjct: 601 LIDVSRLLPDEIDWLNTYHSRCRDILAPYLDESEKAWLKKATEPICA 647
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224096938|ref|XP_002310793.1| predicted protein [Populus trichocarpa] gi|222853696|gb|EEE91243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/642 (75%), Positives = 552/642 (85%), Gaps = 18/642 (2%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M+EILA+LRSLM+SH PPL ALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLAL+T
Sbjct: 1 MSEILASLRSLMASHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTKK 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
+A LWTDGRYFLQATQ+L+ EW LMRM EDP D W+A+NLP +AAIG+DPWCVS+DTAQ
Sbjct: 61 DARLWTDGRYFLQATQQLSVEWTLMRMGEDPGFDAWVADNLPVEAAIGIDPWCVSVDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RW+ FAKKQQKLVQT TNLVD+VWK+RPP E PV V IEF G SV +KLK+LR KL
Sbjct: 121 RWQLTFAKKQQKLVQTETNLVDEVWKSRPPAEINPVVVHPIEFTGCSVAQKLKDLRAKLK 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
NEK RGI++TTLDEVAWLYNIRGTDV YCPVVHAFAI+T+N+AFLYVDK+KVS+E ++
Sbjct: 181 NEKTRGIVVTTLDEVAWLYNIRGTDVSYCPVVHAFAIITSNSAFLYVDKKKVSAETNRYM 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDL----------------IWADPNSC 284
+E+G++VRDY VSSDVVLL S+QL+ ++V+G+D IW DP SC
Sbjct: 241 EENGIDVRDYADVSSDVVLLASDQLDSTSEVKGTDTATGNGTTEAEGNNIDRIWVDPGSC 300
Query: 285 SYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEI 344
YALYSKLNS+KV +QQSPLALAKA+KNPVELDGLKKAH+RDGAA+VQY++WLDKQMQE
Sbjct: 301 CYALYSKLNSEKVHMQQSPLALAKALKNPVELDGLKKAHVRDGAAVVQYLVWLDKQMQES 360
Query: 345 YGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAI 404
YGASGYFLEG++ +KK G ++LTEVTVSDKLE FRASKEHFRGLSFPTISSV PNAAI
Sbjct: 361 YGASGYFLEGQSANKKKDLGAIRLTEVTVSDKLEGFRASKEHFRGLSFPTISSVCPNAAI 420
Query: 405 MHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIA 464
+HYSP +ETCAE++P+SIYL DSGAQY DGTTDITRT HFG PS HEKA YTAVLKGHIA
Sbjct: 421 IHYSPHAETCAELNPDSIYLFDSGAQYLDGTTDITRTVHFGNPSTHEKASYTAVLKGHIA 480
Query: 465 LGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP--RNV 522
LGNA FPNGT GH LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP ISF+P RNV
Sbjct: 481 LGNACFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPHARNV 540
Query: 523 PIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMI 582
P+ ASMT TDEPGYYEDGNFGIRLENVL+V +A+TKFNFGDKGYLSFEHITWAPYQ KMI
Sbjct: 541 PLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGDKGYLSFEHITWAPYQTKMI 600
Query: 583 NLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEP 624
+L L PEEI+WLN YH +CRDILAPYLDE+E+AWL KATEP
Sbjct: 601 DLTLLGPEEINWLNIYHGRCRDILAPYLDESEMAWLNKATEP 642
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357483307|ref|XP_003611940.1| Xaa-Pro aminopeptidase [Medicago truncatula] gi|355513275|gb|AES94898.1| Xaa-Pro aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/654 (73%), Positives = 547/654 (83%), Gaps = 28/654 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA+ L+ALRSLMSSH PPLHALVVPSEDYHQSEYVSARDKRR FVSGFTGSAGLALIT +
Sbjct: 1 MADTLSALRSLMSSHSPPLHALVVPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITKD 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA Q+L+ +WKLMR+ EDPAVD+WMA+NLP DAAIGVDPWC+SIDTAQ
Sbjct: 61 EALLWTDGRYFLQAEQQLSDQWKLMRLAEDPAVDIWMADNLPKDAAIGVDPWCISIDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWERAFAKKQQKLVQT+ NLVD+VW RPP E VQ ++FAG SV +KLK+LR+KL
Sbjct: 121 RWERAFAKKQQKLVQTTKNLVDEVWTTRPPAEINAAVVQPLKFAGRSVTDKLKDLRKKLA 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
E ARGI++T LDEVAWLYNIRG DV YCPVVHAFAIVT+N+AF+YVDKRKVS EV + L
Sbjct: 181 QEHARGIVLTALDEVAWLYNIRGKDVAYCPVVHAFAIVTSNSAFIYVDKRKVSIEVKTHL 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGS-------------------------- 274
+E+G+E+++Y VS D L +N+L+ + + S
Sbjct: 241 EENGIEIKEYTEVSLDAAFLATNELDSVSTAKASLAEVTKQSENSETNKSVNGKHQTGEK 300
Query: 275 --DLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQ 332
+LIWADP SC YALYSKLN D V+LQQSPLAL KA+KNPVELDGL+KAH+RDGAA+VQ
Sbjct: 301 CSNLIWADPASCCYALYSKLNPDAVVLQQSPLALPKALKNPVELDGLRKAHVRDGAAVVQ 360
Query: 333 YIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392
Y++WLD +MQ+IYGASGYFLE K++K ++KLTEVTVSDKLE FRASKEHFRGLSF
Sbjct: 361 YLVWLDNKMQDIYGASGYFLEENTVKKEKPLKSLKLTEVTVSDKLEEFRASKEHFRGLSF 420
Query: 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEK 452
PTISSVGPNAAI+HYSPQ+ETCAE+DP+ IYL DSGAQY DGTTDITRT HFG+PS HEK
Sbjct: 421 PTISSVGPNAAIIHYSPQAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGRPSDHEK 480
Query: 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP 512
ACYTAVLKGHIALGNA FPNGT GH LDIL+R+PLW YGLDYRHGTGHG+GSYLNVHEGP
Sbjct: 481 ACYTAVLKGHIALGNARFPNGTNGHQLDILSRIPLWNYGLDYRHGTGHGIGSYLNVHEGP 540
Query: 513 QSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572
ISF+ RNVP+ ASMT TDEPGYYEDG FGIRLENVLV+ +A+TKFNFGDKGYLSFEHI
Sbjct: 541 HLISFRIRNVPLQASMTVTDEPGYYEDGAFGIRLENVLVINEADTKFNFGDKGYLSFEHI 600
Query: 573 TWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPAS 626
TWAPYQ K+I+L L PEE +WLN+YHSKCRDILAP+LDEA AWLKKATEP +
Sbjct: 601 TWAPYQTKLIDLNLLNPEEKNWLNSYHSKCRDILAPHLDEAGNAWLKKATEPVA 654
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356538129|ref|XP_003537557.1| PREDICTED: probable Xaa-Pro aminopeptidase P-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/657 (73%), Positives = 549/657 (83%), Gaps = 30/657 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M + L+ALRSLM S PPL ALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT N
Sbjct: 1 MEDTLSALRSLMLSQSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITKN 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA QEL+ +WKLMR+ EDPAVD+WMA+NLP +A+IGVDPWC+SIDTAQ
Sbjct: 61 EALLWTDGRYFLQAEQELSAQWKLMRIGEDPAVDIWMADNLPKEASIGVDPWCISIDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWERAFA+KQQKLV TS NLVD+VW NRP + V V ++FAG SV +KLK+LR+KL
Sbjct: 121 RWERAFAEKQQKLVPTSKNLVDEVWINRPQPQINAVIVHPLKFAGRSVADKLKDLRKKLV 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+E+ARGII T LDEVAWLYNIRG+DV YCPVVHAFAIVT+N+AF+YVDKRKVS EV + L
Sbjct: 181 HEQARGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKRKVSVEVQAHL 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNP----------------------------PADVQ 272
E+G+E+R+Y AVSSD LL +++L+ A+
Sbjct: 241 VENGIEIREYTAVSSDTTLLATDELDSVSTAKVALAETEVRKIPNETAKHANGEHQAEEN 300
Query: 273 GSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQ 332
+DLIWADP SC YALY+KLN D VLL QSPLALAKA+KN VELDGLKKAHIRDGAA+VQ
Sbjct: 301 SNDLIWADPGSCCYALYAKLNPDTVLLHQSPLALAKALKNSVELDGLKKAHIRDGAAVVQ 360
Query: 333 YIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392
Y++WLDK+MQ+I GASGYFLE ++ K++KH ++KLTEVTVSD+LE FRASKEHFRGLSF
Sbjct: 361 YLVWLDKKMQDILGASGYFLENDSVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFRGLSF 420
Query: 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEK 452
PTISSVGPNAAI+HYSP++ETCAE+DP+ IYL DSGAQY DGTTDITRT HFGKPS HEK
Sbjct: 421 PTISSVGPNAAIIHYSPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEK 480
Query: 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP 512
ACYTAVLKGHIALGNA FPNGT GH+LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP
Sbjct: 481 ACYTAVLKGHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGP 540
Query: 513 QSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570
ISF+P RNVP+ +SMT TDEPGYYEDG FGIRLENVL+V +A T FNFGD+GYLSFE
Sbjct: 541 HLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEAGTNFNFGDRGYLSFE 600
Query: 571 HITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
HITWAPYQ K+I+L L PEEIDWLN+YHS CRDILAPYL+E E AWLKKATEP A
Sbjct: 601 HITWAPYQTKLIDLNLLCPEEIDWLNSYHSTCRDILAPYLNEVENAWLKKATEPVGA 657
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449451497|ref|XP_004143498.1| PREDICTED: probable Xaa-Pro aminopeptidase P-like [Cucumis sativus] gi|449517810|ref|XP_004165937.1| PREDICTED: probable Xaa-Pro aminopeptidase P-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/657 (73%), Positives = 545/657 (82%), Gaps = 30/657 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA+ L+ALR LM+SH PPL ALVVPSEDYHQSEYVSARDKRREFVSGFTGS GLAL+T
Sbjct: 1 MADTLSALRILMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSTGLALVTQT 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA Q+L+ WKLMRM EDP VD+WMA+NLP DAA+GVDPWCVS++T+Q
Sbjct: 61 EALLWTDGRYFLQAIQQLSDPWKLMRMGEDPPVDLWMADNLPADAAVGVDPWCVSVNTSQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
W RAF+KK+QKLVQT+TNLVD+VWKNRPP E PV + +E+ G SV +KLK LR KL+
Sbjct: 121 IWIRAFSKKEQKLVQTTTNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTKLS 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
EKA G+I+T LDEVAWLYNIRG+DV Y PVVHAFAIVT N+AF YVDKRKVS EV ++
Sbjct: 181 QEKAHGLIVTGLDEVAWLYNIRGSDVSYSPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYM 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGS-------------------------- 274
+ +G+EVRDY AV +DV LL SNQLN + V+GS
Sbjct: 241 ERNGIEVRDYSAVITDVSLLASNQLNLSSFVKGSEVKANVEVELSSIDIAGSNGTKVESQ 300
Query: 275 --DLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQ 332
DLIW DP C YALYSKLNSDKVLLQQSPLAL KA+KN VELDGLKKAHIRDG A+VQ
Sbjct: 301 SSDLIWVDPAQCCYALYSKLNSDKVLLQQSPLALEKALKNSVELDGLKKAHIRDGVAVVQ 360
Query: 333 YIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392
Y++WLDKQ+QE YGASGYFLEG+ ++ K S + KLTEV+VSDKLE+FRASKEHFRGLSF
Sbjct: 361 YLVWLDKQLQETYGASGYFLEGDGVRKPKPSDSKKLTEVSVSDKLEAFRASKEHFRGLSF 420
Query: 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEK 452
PTISSVG NAAI+HY P++ETCAE+DP SIYL DSGAQY DGTTDITRT HFG PSAHEK
Sbjct: 421 PTISSVGSNAAIIHYGPKTETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEK 480
Query: 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP 512
ACYTAVLKGHIALGNA FPNGT GH+LDILAR+PLWKYGLDYRHGTGHG+GS+LNVHEGP
Sbjct: 481 ACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKYGLDYRHGTGHGIGSFLNVHEGP 540
Query: 513 QSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570
ISF+P +NVP+ ASMT TDEPGYYEDG FGIRLENVLVV DA+TKFNFGDKGYLSFE
Sbjct: 541 HLISFRPQAQNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFE 600
Query: 571 HITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
HITWAPYQ K+IN+ LT EE++W+N YHS+CRDILAPYLDE+E WL KATEP +A
Sbjct: 601 HITWAPYQRKLINISLLTFEELNWVNTYHSQCRDILAPYLDESEKLWLNKATEPITA 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496787|ref|XP_003517247.1| PREDICTED: probable Xaa-Pro aminopeptidase P-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/657 (72%), Positives = 551/657 (83%), Gaps = 30/657 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M + ++ALRSLM SH PPL ALVVPSEDYH SEYVSARDKRREFVSGFTGSAGLALIT
Sbjct: 1 MEDTVSALRSLMVSHSPPLDALVVPSEDYHLSEYVSARDKRREFVSGFTGSAGLALITKK 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA +EL+ WKLMR+ EDPAVD+WMA+NLP +A++GVDPWC+SIDTAQ
Sbjct: 61 EALLWTDGRYFLQAEKELSAGWKLMRIGEDPAVDIWMADNLPKEASVGVDPWCISIDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWERAFA+KQQKLV TS NLVD+VW NRPP E V V ++FAG SV +KLK+LR+KL
Sbjct: 121 RWERAFAEKQQKLVPTSKNLVDEVWINRPPAEINAVIVHPVKFAGRSVADKLKDLRKKLV 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+E+ RGII T LDEVAWLYNIRG+DV YCPVVHAFAIVT+N+AF+YVDK+KVS EV + L
Sbjct: 181 HEQTRGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKQKVSVEVQTHL 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNP----------------PADVQGS---------- 274
E+G+E+++Y AVSSD LL +++L+ P+++ S
Sbjct: 241 VENGIEIQEYTAVSSDATLLATDELDAVSTAKAALAETEARKIPSEIDKSVNGEHQAEEN 300
Query: 275 --DLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQ 332
DLIWADP SC YALY+KLN D VLLQQSPLALAKA+KN VELDGLKKAHIRDGAA+VQ
Sbjct: 301 SNDLIWADPVSCCYALYAKLNPDTVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQ 360
Query: 333 YIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392
Y++WLDK+MQ+IYGASGYFLE ++ K++KH ++KLTEVTVSD+LE FRASKEHF+GLSF
Sbjct: 361 YLVWLDKKMQDIYGASGYFLEKDSVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFKGLSF 420
Query: 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEK 452
PTISSVG NAAI+HY P++ETCAE+DP+ IYL DSGAQY DGTTDITRT HFGKPS HEK
Sbjct: 421 PTISSVGSNAAIIHYFPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEK 480
Query: 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP 512
ACYTAVLKGHIALGNA FPNGT GH+LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP
Sbjct: 481 ACYTAVLKGHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGP 540
Query: 513 QSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570
ISF+P RNVP+ +SMT TDEPGYYEDG FGIRLENVL+V +A+T FNFGD+GYLSFE
Sbjct: 541 HLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEADTTFNFGDRGYLSFE 600
Query: 571 HITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
HITWAPYQ K+I+L L+PEEI+WLN+YH+ CR+ILAPYLDE E AWLKKATEP A
Sbjct: 601 HITWAPYQTKLIDLNLLSPEEINWLNSYHATCRNILAPYLDEVENAWLKKATEPVGA 657
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|346229123|gb|AEO21435.1| Xaa-Pro aminopeptidase 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/657 (72%), Positives = 550/657 (83%), Gaps = 30/657 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M + ++ALRSLM SH PPL ALVVPSEDYH SEYVSARDKRREFVSGFTGSAGLALIT
Sbjct: 1 MEDTVSALRSLMVSHSPPLDALVVPSEDYHLSEYVSARDKRREFVSGFTGSAGLALITKK 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA +EL+ WKLMR+ EDPAVD+WMA+NLP +A+IGVDPWC+SIDTAQ
Sbjct: 61 EALLWTDGRYFLQAEKELSAGWKLMRIGEDPAVDIWMADNLPKEASIGVDPWCISIDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RWERAFA+KQQKLV TS NLVD+VW NRPP E V V ++FAG SV +KLK+LR+KL
Sbjct: 121 RWERAFAEKQQKLVPTSKNLVDEVWINRPPAEINAVIVHPVKFAGRSVADKLKDLRKKLV 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
+E+ RGII T LDEVAWLYNIRG+DV YCPVVHAFAIVT+N+AF+YVDK+KVS EV + L
Sbjct: 181 HEQTRGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKQKVSVEVQTHL 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNP----------------PADVQGS---------- 274
E+G+E+++Y AVSSD LL +++L+ P+++ S
Sbjct: 241 VENGIEIQEYTAVSSDATLLATDELDAVSTAKAALAETEARKIPSEIDKSVNGEHQAEEN 300
Query: 275 --DLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQ 332
DLIWADP SC YA Y+KLN D VLLQQSPLALAKA+KN VELDGLKKAHIRDGAA+VQ
Sbjct: 301 SNDLIWADPVSCCYARYAKLNCDTVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQ 360
Query: 333 YIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392
Y++WLDK+MQ+IYGASGYFLE ++ K++KH ++KLTEVTVSD+LE FRASKEHF+GLSF
Sbjct: 361 YLVWLDKKMQDIYGASGYFLEKDSVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFKGLSF 420
Query: 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEK 452
PTISSVG NAAI+HY P++ETCAE+DP+ IYL DSGAQY DGTTDITRT HFGKPS HEK
Sbjct: 421 PTISSVGSNAAIIHYFPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEK 480
Query: 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP 512
ACYTAVLKGHIALGNA FPNGT GH+LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP
Sbjct: 481 ACYTAVLKGHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGP 540
Query: 513 QSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570
ISF+P RNVP+ +SMT TDEPGYYEDG FGIRLENVL+V +A+T FNFGD+GYLSFE
Sbjct: 541 HLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEADTTFNFGDRGYLSFE 600
Query: 571 HITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
HITWAPYQ K+I+L L+PEEI+WLN+YH+ CR+ILAPYLDE E AWLKKATEP A
Sbjct: 601 HITWAPYQTKLIDLNLLSPEEINWLNSYHATCRNILAPYLDEVENAWLKKATEPVGA 657
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535118|ref|NP_001233921.1| Xaa-Pro aminopeptidase 1 [Solanum lycopersicum] gi|15384989|emb|CAC59823.1| Xaa-Pro aminopeptidase 1 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/655 (72%), Positives = 546/655 (83%), Gaps = 28/655 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA+ LAALRSLMSSH P LHAL++PSEDYHQSEYVSARDKRR FVSGFTGSAGLALITM+
Sbjct: 1 MADTLAALRSLMSSHSPSLHALIIPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITMD 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA Q+L+ +WKLMRM EDP VD+WMANNLP DAAIGVD WCVS+DTAQ
Sbjct: 61 EALLWTDGRYFLQAAQQLSDQWKLMRMGEDPPVDIWMANNLPKDAAIGVDTWCVSVDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
+WE AFAKKQQKLVQT+ NLVD VWKNR P + PV V ++FAG SV EKLKELR+KL
Sbjct: 121 KWECAFAKKQQKLVQTTRNLVDDVWKNRLPAQANPVIVHPLQFAGQSVAEKLKELRKKLV 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
KA IIIT LDEVAWLYN+RG+DV YCPVVHAFAIVT ++AF YVDK+K+S E S++
Sbjct: 181 MGKACAIIITALDEVAWLYNVRGSDVSYCPVVHAFAIVTIDSAFFYVDKQKLSPEANSYM 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQL-----------NPPADVQGS--------------- 274
+E+G+ VRDY VSSDVVLL S+QL NP DV+ +
Sbjct: 241 EENGIMVRDYGDVSSDVVLLASDQLTSCSSTKGSKGNPKIDVRNATYVGNSDSHAAEFVN 300
Query: 275 DLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYI 334
DLIW DP +C +ALYSKL++DKVLLQQSPLALAKA+KNPVE++GLKKAH RDGAA+VQY+
Sbjct: 301 DLIWVDPGACCFALYSKLSADKVLLQQSPLALAKALKNPVEIEGLKKAHFRDGAAVVQYL 360
Query: 335 IWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPT 394
+WLDKQMQEIYGASGYF+E E+TK+KK GT +LTEV+VSDKLE FRASKEHFRGLSF T
Sbjct: 361 VWLDKQMQEIYGASGYFMEAESTKQKKQLGTKRLTEVSVSDKLEEFRASKEHFRGLSFRT 420
Query: 395 ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKAC 454
SSVG NAAI+HY P++ETCAE+DP+ IYL DSGAQY DGTTDITRT HFGKPS HEK+
Sbjct: 421 TSSVGSNAAIIHYKPEAETCAELDPDCIYLFDSGAQYLDGTTDITRTIHFGKPSPHEKSS 480
Query: 455 YTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQS 514
YTAVLKGHI+LGNA FPNGT G LDILAR+PLWK GLDYRHGTGHG+GSYLNVHEGP +
Sbjct: 481 YTAVLKGHISLGNARFPNGTNGQALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHN 540
Query: 515 ISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572
ISF+P R+VP+ SM TDEPGYYEDGNFGIR+ENVL+V + +TKFNFG+KGYLSFEHI
Sbjct: 541 ISFRPSARDVPLQVSMAVTDEPGYYEDGNFGIRIENVLIVKEGHTKFNFGNKGYLSFEHI 600
Query: 573 TWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
TWAPYQ K+I++ L PEEI+WLN YH+KCR+IL PYL+ +E+ WLKKATEP +A
Sbjct: 601 TWAPYQRKLIDVSLLIPEEIEWLNEYHAKCREILTPYLNTSEMEWLKKATEPIAA 655
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535316|ref|NP_001233932.1| Xaa-Pro aminopeptidase 2 [Solanum lycopersicum] gi|15384991|emb|CAC59824.1| Xaa-Pro aminopeptidase 2 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/654 (71%), Positives = 542/654 (82%), Gaps = 27/654 (4%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
MA+ LAALRSLM+SH PPL+AL+VPSEDYHQSEYVSARDKRR+FVSGFTGSAG+ALI+MN
Sbjct: 1 MADTLAALRSLMASHSPPLNALIVPSEDYHQSEYVSARDKRRDFVSGFTGSAGIALISMN 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EALLWTDGRYFLQA Q+L+ +WKLMRM EDPA+D+WMA+NLP DAAIGVDPWC+S+DTAQ
Sbjct: 61 EALLWTDGRYFLQAAQQLSEQWKLMRMGEDPALDIWMADNLPKDAAIGVDPWCISVDTAQ 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
+WERAFAKKQQKLV T+ NLVD+VWKN+PP ET P+ V +EFAG SV +KLK+LR KL
Sbjct: 121 KWERAFAKKQQKLVPTARNLVDEVWKNQPPAETNPLIVHPLEFAGRSVADKLKDLRAKLV 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
EKAR IIIT LDEVAWLYN+RGTDV Y PVVHAFAIVT +AFLYVDKRK+SSE S++
Sbjct: 181 KEKARAIIITALDEVAWLYNVRGTDVSYSPVVHAFAIVTLTSAFLYVDKRKLSSEANSYM 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQLNPPA---------------------DVQGS----D 275
KE+G+ VR+Y VSSD VLL S+QL P + ++Q + D
Sbjct: 241 KENGIFVREYGDVSSDAVLLASDQLTPSSADKTPSGLNTETNCGKDTENGEIQTAELVND 300
Query: 276 LIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYII 335
LIW D +C +ALY KLN+DKVLL+QSPLALAKA+KNPVE+ GLK AHIRDGAA+VQY+
Sbjct: 301 LIWVDTGACCFALYLKLNADKVLLKQSPLALAKALKNPVEMKGLKNAHIRDGAAVVQYLA 360
Query: 336 WLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTI 395
WLD+QMQEIYGASGYF E E+ K +LTEV+ SDKLE FRASKEHFRGLSFPTI
Sbjct: 361 WLDRQMQEIYGASGYFAEAESMSMNKLKDLKRLTEVSASDKLEEFRASKEHFRGLSFPTI 420
Query: 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACY 455
SSVG N AI+HYSP++ETCAE+DP+ +YLCDSGAQY DGTTDITRT HFGKP+AHEK CY
Sbjct: 421 SSVGSNGAIIHYSPEAETCAELDPDQMYLCDSGAQYLDGTTDITRTVHFGKPTAHEKTCY 480
Query: 456 TAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSI 515
TAVLKGHI+LGNA FPNGT G+ LD+LAR PLWKYGLDYRHGTGHG+GSYLNVHEGP I
Sbjct: 481 TAVLKGHISLGNARFPNGTNGYALDVLARTPLWKYGLDYRHGTGHGIGSYLNVHEGPHQI 540
Query: 516 SFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHIT 573
SF+P +NVP+ SMT TDEPGYYEDG FGIRLENVL+V + NTKFNFGDKGYL+FEHIT
Sbjct: 541 SFRPSAQNVPLQVSMTVTDEPGYYEDGKFGIRLENVLIVKEGNTKFNFGDKGYLTFEHIT 600
Query: 574 WAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPASA 627
WAPYQ K+I++ L PEEI WLN YH KC +ILAPYL+++E+ WLK AT P +A
Sbjct: 601 WAPYQRKLIDVSLLVPEEIQWLNEYHCKCSEILAPYLNQSEMEWLKNATAPIAA 654
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 627 | ||||||
| TAIR|locus:2115370 | 645 | APP1 "aminopeptidase P1" [Arab | 0.996 | 0.968 | 0.721 | 5.8e-256 | |
| ZFIN|ZDB-GENE-040426-999 | 620 | xpnpep1 "X-prolyl aminopeptida | 0.411 | 0.416 | 0.576 | 8e-142 | |
| UNIPROTKB|A4RF35 | 618 | AMPP "Probable Xaa-Pro aminope | 0.409 | 0.415 | 0.532 | 2.4e-140 | |
| MGI|MGI:2180003 | 623 | Xpnpep1 "X-prolyl aminopeptida | 0.413 | 0.415 | 0.571 | 5e-140 | |
| ASPGD|ASPL0000068024 | 654 | AN11005 [Emericella nidulans ( | 0.433 | 0.415 | 0.512 | 1e-139 | |
| RGD|621274 | 623 | Xpnpep1 "X-prolyl aminopeptida | 0.413 | 0.415 | 0.571 | 9.2e-139 | |
| UNIPROTKB|O54975 | 623 | Xpnpep1 "Xaa-Pro aminopeptidas | 0.413 | 0.415 | 0.571 | 9.2e-139 | |
| UNIPROTKB|F1P0A1 | 627 | XPNPEP1 "Uncharacterized prote | 0.413 | 0.413 | 0.571 | 1.5e-138 | |
| UNIPROTKB|Q9NQW7 | 623 | XPNPEP1 "Xaa-Pro aminopeptidas | 0.413 | 0.415 | 0.568 | 1.5e-138 | |
| UNIPROTKB|E2R097 | 666 | XPNPEP1 "Uncharacterized prote | 0.413 | 0.388 | 0.564 | 4e-138 |
| TAIR|locus:2115370 APP1 "aminopeptidase P1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2464 (872.4 bits), Expect = 5.8e-256, P = 5.8e-256
Identities = 464/643 (72%), Positives = 533/643 (82%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M+EIL++LRSLM+SH PPL ALVVPSEDYHQSEYVSARDKRREFVSGF+GSAGLALIT
Sbjct: 1 MSEILSSLRSLMASHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFSGSAGLALITKK 60
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
EA LWTDGRYFLQA Q+L+ EW LMRM EDP V+VWM++NLP +A IGVD WCVS+DTA
Sbjct: 61 EARLWTDGRYFLQALQQLSDEWTLMRMGEDPLVEVWMSDNLPEEANIGVDSWCVSVDTAN 120
Query: 121 RWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLT 180
RW ++FAKK QKL+ T+T+LVD+VWK+RPP E PV V +EFAG SV K ++LR KL
Sbjct: 121 RWGKSFAKKNQKLITTTTDLVDEVWKSRPPSEMSPVVVHPLEFAGRSVSHKFEDLRAKLK 180
Query: 181 NEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240
E ARG++I LDEVAWLYNIRGTDV YCPVVHAFAI+TT++AFLYVDK+KVS E S+
Sbjct: 181 QEGARGLVIAALDEVAWLYNIRGTDVAYCPVVHAFAILTTDSAFLYVDKKKVSDEANSYF 240
Query: 241 KESGVEVRDYDAVSSDVVLLQSNQL---------------NPPADVQGSDLIWADPNSCS 285
GVEVR+Y V SDV LL S++L + D D +W DP SC
Sbjct: 241 NGLGVEVREYTDVISDVALLASDRLISSFASKTVQHEAAKDMEIDSDQPDRLWVDPASCC 300
Query: 286 YALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIY 345
YALYSKL+++KVLLQ SP++L+KA+KNPVEL+G+K AH+RDGAA+VQY++WLD QMQE+Y
Sbjct: 301 YALYSKLDAEKVLLQPSPISLSKALKNPVELEGIKNAHVRDGAAVVQYLVWLDNQMQELY 360
Query: 346 GASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIM 405
GASGYFLE EA+K KK S T KLTEVTVSDKLES RASKEHFRGLSFPTISSVG NAA++
Sbjct: 361 GASGYFLEAEASK-KKPSETSKLTEVTVSDKLESLRASKEHFRGLSFPTISSVGSNAAVI 419
Query: 406 HYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIAL 465
HYSP+ E CAEMDP+ IYLCDSGAQY DGTTDITRT HFGKPSAHEK CYTAV KGH+AL
Sbjct: 420 HYSPEPEACAEMDPDKIYLCDSGAQYLDGTTDITRTVHFGKPSAHEKECYTAVFKGHVAL 479
Query: 466 GNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP--RNVP 523
GNA FP GT G+TLDILAR PLWKYGLDYRHGTGHGVGSYL VHEGP +SF+P RNVP
Sbjct: 480 GNARFPKGTNGYTLDILARAPLWKYGLDYRHGTGHGVGSYLCVHEGPHQVSFRPSARNVP 539
Query: 524 IHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMIN 583
+ A+MT TDEPGYYEDGNFGIRLENVLVV DA T+FNFGDKGYL FEHITWAPYQ+K+I+
Sbjct: 540 LQATMTVTDEPGYYEDGNFGIRLENVLVVNDAETEFNFGDKGYLQFEHITWAPYQVKLID 599
Query: 584 LKSLTPEEIDWLNAYHSKCRDILAPYLDEAELAWLKKATEPAS 626
L LT EEIDWLN YHSKC+DILAP++++ E+ WLKKATEP S
Sbjct: 600 LDELTREEIDWLNTYHSKCKDILAPFMNQTEMEWLKKATEPVS 642
|
|
| ZFIN|ZDB-GENE-040426-999 xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 793 (284.2 bits), Expect = 8.0e-142, Sum P(2) = 8.0e-142
Identities = 154/267 (57%), Positives = 189/267 (70%)
Query: 364 GTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIY 423
GTV TE++ +DK E R+ ++ F GLSFPTISSVGPN AI+HY P ET + N +Y
Sbjct: 355 GTV--TEISAADKAEELRSQQKEFVGLSFPTISSVGPNGAIIHYRPLPETNRTLSLNEVY 412
Query: 424 LCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483
L DSGAQY DGTTD+TRT HFG PS +EK C+T VLKGHIA+ AVFPNGT GH LD A
Sbjct: 413 LIDSGAQYTDGTTDVTRTVHFGTPSEYEKECFTYVLKGHIAVSAAVFPNGTKGHLLDSFA 472
Query: 484 RLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNF 542
R LW GLDY HGTGHGVG +LNVHEGP IS+K + P+ A M +DEPGYYEDG+F
Sbjct: 473 RAALWDSGLDYLHGTGHGVGCFLNVHEGPCGISYKTFADEPLEAGMIVSDEPGYYEDGSF 532
Query: 543 GIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKC 602
GIRLENV++V A TK+N+ ++G L+FE +T P Q+KMIN LT +E DW+N YH KC
Sbjct: 533 GIRLENVVLVVPATTKYNYRNRGSLTFEPLTLVPIQLKMINTDLLTQKERDWVNDYHRKC 592
Query: 603 RDILAPYLD-----EAELAWLKKATEP 624
R+ + L+ EA WL + T+P
Sbjct: 593 RETIGAELERQGRKEAR-DWLIRETQP 618
|
|
| UNIPROTKB|A4RF35 AMPP "Probable Xaa-Pro aminopeptidase P" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 736 (264.1 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
Identities = 139/261 (53%), Positives = 178/261 (68%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
L EV + KLE+ RA E F GLSF TIS+VG NAA++HY P+ ++CA +D +S+YLCDS
Sbjct: 357 LNEVQAATKLENLRAKHEDFVGLSFTTISAVGANAAVIHYKPEEDSCATIDADSVYLCDS 416
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQ+ DGTTD TRT HFGKPS E+ YT VLKG++AL A+FP GT G LD AR L
Sbjct: 417 GAQFLDGTTDTTRTLHFGKPSEAERKAYTLVLKGNMALDMAIFPKGTTGFALDPFARQFL 476
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGYYEDGNFGIR 545
W+ GLDYRHGTGHGVGSYLNVHEGP I + VP+ + EPG+YEDG++GIR
Sbjct: 477 WQEGLDYRHGTGHGVGSYLNVHEGPIGIGTRKHYAGVPLAPGNVTSIEPGFYEDGSYGIR 536
Query: 546 LENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDI 605
+EN+ ++ + TK FGDK YL FEH+T PY ++I+ LTP E WLN Y+ D
Sbjct: 537 IENIAMIREVETKHMFGDKPYLGFEHVTMVPYCRRLIDESLLTPREKQWLNDYNKLILDK 596
Query: 606 LAPYL--DEAELAWLKKATEP 624
+ + D +AWL++ T+P
Sbjct: 597 TSGFFKDDNLTMAWLERETQP 617
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| MGI|MGI:2180003 Xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 804 (288.1 bits), Expect = 5.0e-140, Sum P(2) = 5.0e-140
Identities = 151/264 (57%), Positives = 188/264 (71%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
+TE++ +DK E FR + F LSFPTISS GPN AI+HY+P ET + + +YL DS
Sbjct: 357 VTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDS 416
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+ AVFP GT GH LD AR L
Sbjct: 417 GAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSAL 476
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRL 546
W GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M TDEPGYYEDG FGIR+
Sbjct: 477 WDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRI 536
Query: 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDIL 606
ENV++V A TK+NF ++G L+FE +T P Q KMI++ +LT +E DWLN+YH CRD++
Sbjct: 537 ENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNSYHQTCRDVV 596
Query: 607 APYLD----EAELAWLKKATEPAS 626
L + L WL + TEP S
Sbjct: 597 GKELQSQGRQEALEWLIRETEPVS 620
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| ASPGD|ASPL0000068024 AN11005 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 743 (266.6 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
Identities = 145/283 (51%), Positives = 184/283 (65%)
Query: 350 YF--LEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHY 407
YF LE E +K L EV +DKLE R+ +E F GLSF TISS GPN A++HY
Sbjct: 376 YFAWLENELVNKKS-----TLDEVDAADKLEQLRSKQELFAGLSFDTISSTGPNGAVIHY 430
Query: 408 SPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGN 467
P+ +C+ +DPN+IYLCDSG QY DGTTD+TRTFHFG+P+ EK +T VLKG I L +
Sbjct: 431 KPEKGSCSVIDPNAIYLCDSGGQYLDGTTDVTRTFHFGQPTELEKKAFTLVLKGCIGLDS 490
Query: 468 AVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIH 525
AVFP GT G LD+LAR LWK GLD+ HGTGHG+GSYLNVHEGP I + + VP+
Sbjct: 491 AVFPKGTSGFALDVLARQHLWKEGLDFLHGTGHGIGSYLNVHEGPVGIGTRVQYTEVPLA 550
Query: 526 ASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLK 585
+DEPG+YEDG FGIR+ENV++V + T FG++ +L FEH+T P +I
Sbjct: 551 PGNVISDEPGFYEDGKFGIRIENVIMVREVQTTHKFGERPWLGFEHVTMCPIGQNLIEPS 610
Query: 586 SLTPEEIDWLNAYHSKCRDILAPYL--DEAELAWLKKATEPAS 626
L+ EI WLN YH++ + Y DE WL++ T P S
Sbjct: 611 LLSDSEIKWLNDYHAEVWEKTHKYFENDEVTRKWLERETRPIS 653
|
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| RGD|621274 Xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 803 (287.7 bits), Expect = 9.2e-139, Sum P(2) = 9.2e-139
Identities = 151/264 (57%), Positives = 188/264 (71%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
+TE++ +DK E FR + F LSFPTISS GPN AI+HY+P ET + + +YL DS
Sbjct: 357 VTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPIPETNRTLSLDEVYLIDS 416
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+ AVFP GT GH LD AR L
Sbjct: 417 GAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSAL 476
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRL 546
W GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M TDEPGYYEDG FGIR+
Sbjct: 477 WDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRI 536
Query: 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDIL 606
ENV++V A TK+NF ++G L+FE +T P Q KMI++ +LT +E DWLN+YH CRD++
Sbjct: 537 ENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDALTDKECDWLNSYHQTCRDVI 596
Query: 607 APYLD----EAELAWLKKATEPAS 626
L + L WL + TEP S
Sbjct: 597 GKELQTQGRQEALEWLLRETEPIS 620
|
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| UNIPROTKB|O54975 Xpnpep1 "Xaa-Pro aminopeptidase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 803 (287.7 bits), Expect = 9.2e-139, Sum P(2) = 9.2e-139
Identities = 151/264 (57%), Positives = 188/264 (71%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
+TE++ +DK E FR + F LSFPTISS GPN AI+HY+P ET + + +YL DS
Sbjct: 357 VTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPIPETNRTLSLDEVYLIDS 416
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+ AVFP GT GH LD AR L
Sbjct: 417 GAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSAL 476
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRL 546
W GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M TDEPGYYEDG FGIR+
Sbjct: 477 WDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRI 536
Query: 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDIL 606
ENV++V A TK+NF ++G L+FE +T P Q KMI++ +LT +E DWLN+YH CRD++
Sbjct: 537 ENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDALTDKECDWLNSYHQTCRDVI 596
Query: 607 APYLD----EAELAWLKKATEPAS 626
L + L WL + TEP S
Sbjct: 597 GKELQTQGRQEALEWLLRETEPIS 620
|
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| UNIPROTKB|F1P0A1 XPNPEP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 797 (285.6 bits), Expect = 1.5e-138, Sum P(2) = 1.5e-138
Identities = 152/266 (57%), Positives = 189/266 (71%)
Query: 364 GTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIY 423
GTV TE+ +DK E FR+ ++ F LSF TISS GPN AI+HY P ET + N IY
Sbjct: 359 GTV--TEIIAADKAEEFRSQQKDFVELSFATISSTGPNGAIIHYKPVPETNRTLSVNEIY 416
Query: 424 LCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483
L DSGAQY+DGTTD+TRT HFG PSA+EK C+T VLKGHIA+ A+FPNGT GH LD A
Sbjct: 417 LLDSGAQYKDGTTDVTRTMHFGTPSAYEKECFTCVLKGHIAVSAAIFPNGTKGHLLDSFA 476
Query: 484 RLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNF 542
R LW GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M +DEPGYYEDG+F
Sbjct: 477 RSALWDCGLDYLHGTGHGVGSFLNVHEGPCGISYKTFADEPLEAGMIVSDEPGYYEDGSF 536
Query: 543 GIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKC 602
GIR+ENV++V A TK+NF ++G L+FE +T P Q KMI++ LT +E +W+N YH KC
Sbjct: 537 GIRIENVVLVIPAETKYNFKNRGSLTFEPLTLVPIQTKMIDVSLLTQKECNWVNDYHQKC 596
Query: 603 RDILAPYLDEA----ELAWLKKATEP 624
R+++ L+ L WL + TEP
Sbjct: 597 REVIGAELERQGRHEALRWLIRETEP 622
|
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| UNIPROTKB|Q9NQW7 XPNPEP1 "Xaa-Pro aminopeptidase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 1.5e-138, Sum P(2) = 1.5e-138
Identities = 150/264 (56%), Positives = 186/264 (70%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
+TE++ +DK E FR + F LSFPTISS GPN AI+HY+P ET + + +YL DS
Sbjct: 357 VTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDS 416
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+ AVFP GT GH LD AR L
Sbjct: 417 GAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSAL 476
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRL 546
W GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M TDEPGYYEDG FGIR+
Sbjct: 477 WDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRI 536
Query: 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDIL 606
ENV++V TK+NF ++G L+FE +T P Q KMI++ SLT +E DWLN YH CRD++
Sbjct: 537 ENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVI 596
Query: 607 APYLD----EAELAWLKKATEPAS 626
L + L WL + T+P S
Sbjct: 597 GKELQKQGRQEALEWLIRETQPIS 620
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| UNIPROTKB|E2R097 XPNPEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 790 (283.2 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 149/264 (56%), Positives = 186/264 (70%)
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDS 427
++E++ +DK E FR + F LSFPTISS GPN AI+HY+P ET + + +YL DS
Sbjct: 400 VSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDS 459
Query: 428 GAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL 487
GAQY+DGTTD+TRT HFG P+A+EK C+T VLKGHIA+ AVFP GT GH LD AR L
Sbjct: 460 GAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSAL 519
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRL 546
W GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A M TDEPGYYEDG FGIR+
Sbjct: 520 WDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRI 579
Query: 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDIL 606
ENV++V TK+NF ++G L+FE +T P Q KMI++ SLT +E DWLN YH CRD++
Sbjct: 580 ENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVI 639
Query: 607 APYLD----EAELAWLKKATEPAS 626
L + L WL + T+P S
Sbjct: 640 GKELQKQGRQEALEWLIRETQPIS 663
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2QGR5 | AMPP1_ASPNC | 3, ., 4, ., 1, 1, ., 9 | 0.4423 | 0.9553 | 0.9755 | yes | no |
| Q2U7S5 | AMPP1_ASPOR | 3, ., 4, ., 1, 1, ., 9 | 0.4391 | 0.9553 | 0.9159 | yes | no |
| Q4WUD3 | AMPP1_ASPFU | 3, ., 4, ., 1, 1, ., 9 | 0.4490 | 0.9473 | 0.9082 | yes | no |
| O54975 | XPP1_RAT | 3, ., 4, ., 1, 1, ., 9 | 0.4223 | 0.9489 | 0.9550 | yes | no |
| Q5AVF0 | AMPP1_EMENI | 3, ., 4, ., 1, 1, ., 9 | 0.4484 | 0.9489 | 0.9097 | yes | no |
| Q1JPJ2 | XPP1_BOVIN | 3, ., 4, ., 1, 1, ., 9 | 0.4223 | 0.9489 | 0.9550 | yes | no |
| Q09795 | YAA1_SCHPO | 3, ., 4, ., -, ., - | 0.4449 | 0.9282 | 0.9732 | yes | no |
| Q6P1B1 | XPP1_MOUSE | 3, ., 4, ., 1, 1, ., 9 | 0.4301 | 0.9489 | 0.9550 | yes | no |
| B6HQC9 | AMPP1_PENCW | 3, ., 4, ., 1, 1, ., 9 | 0.4328 | 0.9537 | 0.9755 | yes | no |
| Q9NQW7 | XPP1_HUMAN | 3, ., 4, ., 1, 1, ., 9 | 0.4223 | 0.9489 | 0.9550 | yes | no |
| Q54G06 | XPP1_DICDI | 3, ., 4, ., 1, 1, ., 9 | 0.4093 | 0.9393 | 0.9393 | yes | no |
| B2AWV6 | AMPP1_PODAN | 3, ., 4, ., 1, 1, ., 9 | 0.4409 | 0.9409 | 0.8676 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11.9 | 0.914 |
| 3rd Layer | 3.4.11 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00024992001 | SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (642 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00038542001 | RecName- Full=Proline iminopeptidase; EC=3.4.11.5; (331 aa) | • | 0.412 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 627 | |||
| cd01085 | 224 | cd01085, APP, X-Prolyl Aminopeptidase 2 | 1e-131 | |
| COG0006 | 384 | COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid | 4e-62 | |
| pfam00557 | 208 | pfam00557, Peptidase_M24, Metallopeptidase family | 2e-52 | |
| cd01092 | 208 | cd01092, APP-like, Similar to Prolidase and Aminop | 4e-35 | |
| cd01066 | 207 | cd01066, APP_MetAP, A family including aminopeptid | 8e-29 | |
| cd01087 | 243 | cd01087, Prolidase, Prolidase | 1e-18 | |
| PRK09795 | 361 | PRK09795, PRK09795, aminopeptidase; Provisional | 6e-13 | |
| pfam01321 | 128 | pfam01321, Creatinase_N, Creatinase/Prolidase N-te | 8e-12 | |
| PRK10879 | 438 | PRK10879, PRK10879, proline aminopeptidase P II; P | 3e-09 | |
| PRK14576 | 405 | PRK14576, PRK14576, putative endopeptidase; Provis | 8e-06 |
| >gnl|CDD|238518 cd01085, APP, X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
Score = 383 bits (985), Expect = e-131
Identities = 128/245 (52%), Positives = 167/245 (68%), Gaps = 21/245 (8%)
Query: 318 GLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKL 377
G++ AHIRDG A+V+++ WL++++ + +TE++ +DKL
Sbjct: 1 GMRAAHIRDGVALVEFLAWLEQEVPKGE---------------------TITELSAADKL 39
Query: 378 ESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTD 437
E FR ++ + GLSF TIS GPN AI+HYSP E+ ++ P+ +YL DSG QY DGTTD
Sbjct: 40 EEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKISPDGLYLIDSGGQYLDGTTD 99
Query: 438 ITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHG 497
ITRT H G+P+A +K YT VLKGHIAL A FP GT G LD LAR PLWK GLDY HG
Sbjct: 100 ITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGHG 159
Query: 498 TGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANT 557
TGHGVGS+LNVHEGPQSIS P NVP+ A M ++EPGYY++G +GIR+EN+++V +A T
Sbjct: 160 TGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAET 219
Query: 558 KFNFG 562
G
Sbjct: 220 TEFGG 224
|
E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide. Length = 224 |
| >gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 4e-62
Identities = 106/394 (26%), Positives = 165/394 (41%), Gaps = 47/394 (11%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWL--YNIRGTDVPYCPVVHAFAIVTTNAAFLYV 227
+L LRE + +++T+ +L ++ G + +V A L+V
Sbjct: 12 ARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAFGFERLQALLVPA-----EGEPVLFV 66
Query: 228 DKRKVSS-EVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLI----WADPN 282
R + + S++K VEV + D + + L L I
Sbjct: 67 RGRDEEAAKETSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTL 126
Query: 283 SCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQ 342
+ L + L +++ + + IK+P E+ ++KA AA+ + + M
Sbjct: 127 AAFERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGM- 185
Query: 343 EIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNA 402
TE ++ +LE K G SF TI + G NA
Sbjct: 186 --------------------------TEAEIAAELEYALR-KGGAEGPSFDTIVASGENA 218
Query: 403 AIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462
A+ HY+P + + L D G Y +DITRTF GKPS ++ Y AVL+
Sbjct: 219 ALPHYTPSDRK---LRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQ 275
Query: 463 IALGNAVFPNGTCGHTLDILARLPLWK--YGLDYRHGTGHGVGSYLNVHEGPQSISFKPR 520
A A+ P G G +D AR L K YGL + HGTGHGVG L+VHE PQ +S
Sbjct: 276 EAAIAAIRP-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS-PGS 333
Query: 521 NVPIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554
+ + M + EPG Y G G+R+E+ ++VT+
Sbjct: 334 DTTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367
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Length = 384 |
| >gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 2e-52
Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 369 TEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428
TE ++ +LE+ ++ RG +FP I + GPNAA+ HY P + + L D G
Sbjct: 26 TERELAAELEAAFLARGGARGPAFPPIVASGPNAAVPHYIPSDRV---LKDGDLVLIDVG 82
Query: 429 AQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW 488
A+Y +DITRTF GKP+ ++ Y AVL+ A AV P G G +D AR L
Sbjct: 83 AEYDGYHSDITRTFVVGKPTPEQRELYEAVLEAQEAAIAAVKP-GVTGGDVDAAAREVLE 141
Query: 489 KYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYE-DGNFGIR 545
+ G + HG GHG+G L+VH+ IS + + M T EPG Y G G+R
Sbjct: 142 EGGYGEYFPHGLGHGIG--LDVHDEGPYISRGGNDRVLEPGMVFTIEPGIYFIPGWGGVR 199
Query: 546 LENVLVVTD 554
+E+ ++VT+
Sbjct: 200 IEDTVLVTE 208
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This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module. Length = 208 |
| >gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 4e-35
Identities = 69/193 (35%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 365 TVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYL 424
+TE V+ +LE F G SF TI + GPN+A+ H P + +++ + L
Sbjct: 23 KPGMTEREVAAELEYFMRKLGA-EGPSFDTIVASGPNSALPHGVP---SDRKIEEGDLVL 78
Query: 425 CDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILAR 484
D GA Y +DITRT G+PS K Y VL+ A AV P T +D AR
Sbjct: 79 IDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKE-VDKAAR 137
Query: 485 LPLWKYGL-DY-RHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHASMTATDEPGYYEDGN 541
+ + G +Y H TGHGVG L VHE P P + + M T EPG Y G
Sbjct: 138 DVIEEAGYGEYFIHRTGHGVG--LEVHEAP---YISPGSDDVLEEGMVFTIEPGIYIPGK 192
Query: 542 FGIRLENVLVVTD 554
G+R+E+ ++VT+
Sbjct: 193 GGVRIEDDVLVTE 205
|
The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline. Length = 208 |
| >gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 8e-29
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 376 KLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGT 435
+A + + PTI G A+ HY P + + L D G Y
Sbjct: 32 AAAIEQALRAAGGYPAGPTIVGSGARTALPHYRPDDRR---LQEGDLVLVDLGGVYDGYH 88
Query: 436 TDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL--WKYGLD 493
D+TRTF G+PS ++ Y AV + A A+ P T +D AR L G +
Sbjct: 89 ADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEE-VDAAAREVLEEHGLGPN 147
Query: 494 YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553
+ H TGHG+G L +HE P + + M EPG Y G G+R+E+ ++VT
Sbjct: 148 FGHRTGHGIG--LEIHEPPVLKAGDDT--VLEPGMVFAVEPGLYLPGGGGVRIEDTVLVT 203
Query: 554 D 554
+
Sbjct: 204 E 204
|
Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation. Length = 207 |
| >gnl|CDD|238520 cd01087, Prolidase, Prolidase | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 1e-18
Identities = 58/198 (29%), Positives = 85/198 (42%), Gaps = 36/198 (18%)
Query: 390 LSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPS 448
L++ I + G NAAI+HY + + D + L D+GA+Y +DITRTF GK +
Sbjct: 46 LAYSYIVAAGSNAAILHYVHNDQPLKDGD---LVLIDAGAEYGGYASDITRTFPVNGKFT 102
Query: 449 AHEKACYTAVLKGHIALGNAVFPNG--------TCGHTLDILARLPLWKYGLD------- 493
++ Y AVL A A P + L L + K +D
Sbjct: 103 DEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGA 162
Query: 494 ----YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY---EDGNF---- 542
+ HG GH +G L+VH+ + + R P+ M T EPG Y + +
Sbjct: 163 YAKFFPHGLGHYLG--LDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYF 220
Query: 543 ---GIRLE-NVLVVTDAN 556
GIR+E +VLV D
Sbjct: 221 RGGGIRIEDDVLVTEDGP 238
|
E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro. Length = 243 |
| >gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 6e-13
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF---GKP 447
SF TI + G A+ H + A + ++ D GA YQ +D+TRT G
Sbjct: 180 SFDTIVASGWRGALPHGKASDKIVAAGEFVTL---DFGALYQGYCSDMTRTLLVNGEGVS 236
Query: 448 SAHEK--ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWK--YGLDYRHGTGHGVG 503
+ Y VL+ +A +A+ P G +D AR + + YG + H TGH +G
Sbjct: 237 AESHPLFNVYQIVLQAQLAAISAIRP-GVRCQQVDDAARRVITEAGYGDYFGHNTGHAIG 295
Query: 504 SYLNVHEGPQSISFKPR-NVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553
+ VHE P+ F PR + M T EPG Y G G+R+E+V++VT
Sbjct: 296 --IEVHEDPR---FSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341
|
Length = 361 |
| >gnl|CDD|216431 pfam01321, Creatinase_N, Creatinase/Prolidase N-terminal domain | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 8e-12
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 28/146 (19%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLAL-ITMNEAL 63
L LR LM+ L AL++ S + +++GFTGS GLAL +T + A
Sbjct: 2 LERLRELMAEAG--LDALLLTSPE------------NIRYLTGFTGSRGLALVVTADGAT 47
Query: 64 LWTD-GRYFLQATQELTG----EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDT 118
L TD RY A + + E+ L D + +G + +++
Sbjct: 48 LLTDALRYTEAAEESVPDLEVIEYDDAEALAD-----LLKELGLELKRLGFEGDHLTVAE 102
Query: 119 AQRWERAFAKKQQKLVQTSTNLVDKV 144
+R + A + LV S L++++
Sbjct: 103 YERLKEALPDAE--LVDAS-GLIEEL 125
|
This family includes the N-terminal non-catalytic domains from creatinase and prolidase. The exact function of this domain is uncertain. Length = 128 |
| >gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 46/199 (23%)
Query: 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPSA 449
S+ TI G N I+HY+ E +EM + L D+G +Y+ DITRTF GK +
Sbjct: 226 SYNTIVGSGENGCILHYT---ENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTP 282
Query: 450 HEKACYTAVLKGHIALGNAVFPNGTC-----GHTLDI----LARLPLWKYGLD------- 493
++ Y VL+ + ++ GT G + I L +L + K +D
Sbjct: 283 AQREIYDIVLES-LETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENA 341
Query: 494 YR----HGTGHGVGSYLNVHE----GPQSISFKPRNVPIHASMTATDEPGYY-------- 537
+R HG H +G L+VH+ G R+ + M T EPG Y
Sbjct: 342 HRPFFMHGLSHWLG--LDVHDVGVYGQD------RSRILEPGMVLTVEPGLYIAPDADVP 393
Query: 538 -EDGNFGIRLENVLVVTDA 555
+ GIR+E+ +V+T+
Sbjct: 394 EQYRGIGIRIEDDIVITET 412
|
Length = 438 |
| >gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 8e-06
Identities = 64/266 (24%), Positives = 102/266 (38%), Gaps = 61/266 (22%)
Query: 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVK 367
+ IK+P E++ H+R A I +Y G A+ KK
Sbjct: 175 RMIKSPWEIE-----HLRKSAEITEY--------------------GIASAAKKIRVGCT 209
Query: 368 LTEVTVSDKLESFRASKEHFRGLSFPTIS--SVGPNAAIMHYSPQ---SETCAEMDPNSI 422
E+T + F+A+ F +F + SVG N +SP+ T A+ +
Sbjct: 210 AAELTAA-----FKAAVMSFPETNFSRFNLISVGDN-----FSPKIIADTTPAK--VGDL 257
Query: 423 YLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFP----NGTCGHT 478
D G D+ RTF G+P + Y + GH + + V P T
Sbjct: 258 IKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDST 317
Query: 479 LDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP-----QSISFKPRNVPIHASMTATDE 533
+ ++ L Y R GHG G +L + E P + +F P M + E
Sbjct: 318 MAVIKTSGLPHY---NRGHLGHGDGVFLGLEEVPFVSTQATETFCP-------GMVLSLE 367
Query: 534 PGYYEDGNFGIRLENVLVVTDANTKF 559
YY G I LE+++++TD+ +F
Sbjct: 368 TPYYGIGVGSIMLEDMILITDSGFEF 393
|
Length = 405 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 627 | |||
| KOG2413 | 606 | consensus Xaa-Pro aminopeptidase [Amino acid trans | 100.0 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 100.0 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 100.0 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 100.0 | |
| PRK14575 | 406 | putative peptidase; Provisional | 100.0 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 100.0 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 100.0 | |
| PRK15173 | 323 | peptidase; Provisional | 100.0 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 100.0 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 100.0 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 100.0 | |
| KOG2737 | 492 | consensus Putative metallopeptidase [General funct | 100.0 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 100.0 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 100.0 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 100.0 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 100.0 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 100.0 | |
| KOG2414 | 488 | consensus Putative Xaa-Pro aminopeptidase [Amino a | 100.0 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 100.0 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 100.0 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 100.0 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 100.0 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 100.0 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 100.0 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 99.97 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 99.97 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 99.97 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 99.97 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 99.97 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 99.96 | |
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 99.95 | |
| KOG1189 | 960 | consensus Global transcriptional regulator, cell d | 99.92 | |
| COG5406 | 1001 | Nucleosome binding factor SPN, SPT16 subunit [Tran | 99.81 | |
| PF01321 | 132 | Creatinase_N: Creatinase/Prolidase N-terminal doma | 99.65 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 99.64 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 99.58 | |
| PRK14575 | 406 | putative peptidase; Provisional | 99.47 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 99.34 | |
| KOG2775 | 397 | consensus Metallopeptidase [General function predi | 99.22 | |
| PF01321 | 132 | Creatinase_N: Creatinase/Prolidase N-terminal doma | 99.17 | |
| KOG2776 | 398 | consensus Metallopeptidase [General function predi | 99.06 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 98.18 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 97.95 | |
| PRK15173 | 323 | peptidase; Provisional | 97.56 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 97.01 | |
| KOG2413 | 606 | consensus Xaa-Pro aminopeptidase [Amino acid trans | 96.64 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 96.45 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 95.93 | |
| KOG2414 | 488 | consensus Putative Xaa-Pro aminopeptidase [Amino a | 95.7 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 95.43 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 95.11 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 94.84 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 94.1 | |
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 93.56 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 91.25 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 90.46 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 89.44 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 89.31 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 89.06 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 87.86 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 87.75 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 87.53 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 87.14 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 86.94 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 86.72 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 86.29 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 84.95 | |
| PF05195 | 134 | AMP_N: Aminopeptidase P, N-terminal domain; InterP | 84.22 | |
| PF05195 | 134 | AMP_N: Aminopeptidase P, N-terminal domain; InterP | 83.51 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 82.72 | |
| KOG1189 | 960 | consensus Global transcriptional regulator, cell d | 80.38 |
| >KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-134 Score=1060.74 Aligned_cols=589 Identities=52% Similarity=0.916 Sum_probs=561.8
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccCcE
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGEW 82 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~~~ 82 (627)
.++.++|+.|+..+ ++|||||+.|+|||||++++|+|+.|+|||+||+|++|||.++|.|||||||+.||.+|++++|
T Consensus 10 ~~~~~~~~~~~~~~--i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~~~a~lwtD~RY~~QA~~qld~~W 87 (606)
T KOG2413|consen 10 FELMRLRELMKSPP--IDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGRYFQQAEQQLDSNW 87 (606)
T ss_pred HHHHHHHHHhcCCC--ceEEEccCCchhhhhhhcchhhhhhhhcccCCCcceEEEecCcceEEEccHHHHHHHhhhcccc
Confidence 36789999999987 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCC-CCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCccccccc
Q 006890 83 KLMRMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQI 161 (627)
Q Consensus 83 ~~~~~~~~-~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~~~~ 161 (627)
++++++.+ +.+.+||...++.+++||+||+++|+..|.++.+.+..++.+++++..|+||.+|..||+.+.+++..++.
T Consensus 88 ~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i~~nLVD~iW~~rP~~~~~~v~~l~~ 167 (606)
T KOG2413|consen 88 TLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPIPGNLVDEIWGDRPERPGNPVIVLDL 167 (606)
T ss_pred eeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHHhhCCCeEeeccccchhhhhccCCccCCCceEEeec
Confidence 99999988 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhh
Q 006890 162 EFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
+|+|.++..|+..||..|+..+++++|++++|+|+||+|+||+|+||||||++|++|+.+++.||+++.++......++.
T Consensus 168 ~~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~~~~ 247 (606)
T KOG2413|consen 168 EFAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKKHLR 247 (606)
T ss_pred cccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred hCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcCCHHHHHHHHH
Q 006890 242 ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKK 321 (627)
Q Consensus 242 ~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~ 321 (627)
..++++.+|..+...+..++++ . ...++++.+ .+++.+...+++...+...+||..+|++||+.|+++||.
T Consensus 248 ~~~v~i~pY~~i~~~i~~~~~~-~-------~~~~i~ia~-~~~~~i~~~i~~~~~~~~~Spi~~~kAiKN~~E~~gmr~ 318 (606)
T KOG2413|consen 248 EDGVEIRPYDQIWSDIKNWASA-F-------ADKKIWISP-ETNYGIGELIGEDHSMIDPSPISRAKAIKNDDELKGMRN 318 (606)
T ss_pred hCceeeeeHHHHHHHHHHHhcc-c-------CceeEeecc-cceeeecccccccccccccCHHHHHHHhcChHHhhhhhh
Confidence 8999999999999988888753 1 245778877 678888888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCccccc-CC
Q 006890 322 AHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSV-GP 400 (627)
Q Consensus 322 A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~-G~ 400 (627)
|+..++.|+++++.|++..+.. ...+||.+++.+++++|.++.+|.|+||+||+++ |+
T Consensus 319 shirD~~Alve~~~wle~~~~~---------------------g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~ 377 (606)
T KOG2413|consen 319 SHIRDGAALVEYFAWLEKELHK---------------------GYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGP 377 (606)
T ss_pred cchhhHHHHHHHHHHHhhhhhc---------------------CcccchhhHHHHHHHHHHhhccccCcCcceeeccCCC
Confidence 9999999999999999987743 2349999999999999999999999999999977 99
Q ss_pred CcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHH
Q 006890 401 NAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLD 480 (627)
Q Consensus 401 n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~ 480 (627)
|+|++||.|.+++|+.+.+..+++||+|+||..||||+|||+++|+||++++++||.|+++|+++.+++||+|+.++.+|
T Consensus 378 NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD 457 (606)
T KOG2413|consen 378 NGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLD 457 (606)
T ss_pred CceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCcc
Q 006890 481 ILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTK 558 (627)
Q Consensus 481 ~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~ 558 (627)
.+||..||+.|++|.|+||||||+||+|||+|..++.++ +..+|++|||+|+|||+|.+|.|||||||+++|.+.+.+
T Consensus 458 ~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 458 ALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred HHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEecccc
Confidence 999999999999999999999999999999999998875 678899999999999999999999999999999999988
Q ss_pred cccCCcceeeeecccccccccccccccCCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHHccccC
Q 006890 559 FNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDE----AELAWLKKATEPA 625 (627)
Q Consensus 559 ~~~~~~~~~~fe~lT~~p~~~~~i~~~~l~~~e~~~ln~y~~~~~~~~~~~l~~----~~~~wl~~~~~~~ 625 (627)
++| +.||+||+||++|+++++||++|||++|+.|||.||++|+++|+|+|++ .+++||+++|+||
T Consensus 538 ~~~--~~~L~fe~lT~vP~q~klid~~LLs~eE~~~LN~Yh~~v~~~i~~~L~~~~~~~~~~WL~~~t~Pi 606 (606)
T KOG2413|consen 538 HNF--RGFLTFEPLTLVPYQTKLIDKSLLSEEEINWLNEYHAKVRSKIGPELQKEGRMEEYKWLINATQPI 606 (606)
T ss_pred ccc--cceeeeccceecceecccCChhhCCHHHHHHHHHHHHHHHHhccHHHhhccchhHHHHHHhhccCC
Confidence 888 7899999999999999999999999999999999999999999999985 5799999999997
|
|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-63 Score=525.50 Aligned_cols=346 Identities=25% Similarity=0.386 Sum_probs=292.8
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccCc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGE 81 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~~ 81 (627)
++||++||++|++++ +||+||+++ .|++|||||+|++|+++|++++++||||+||++||++++++
T Consensus 1 ~~Rl~~l~~~m~~~~--lDa~lI~~~------------~n~~YLTGf~g~~g~llIt~~~~~l~td~ry~~qa~~~~~~- 65 (361)
T PRK09795 1 MTLLASLRDWLKAQQ--LDAVLLSSR------------QNKQPHLGISTGSGYVVISRESAHILVDSRYYADVEARAQG- 65 (361)
T ss_pred CcHHHHHHHHHHHCC--CCEEEECCc------------cccccccCccCCCeEEEEECCCCEEEcCcchHHHHHhhCCC-
Confidence 369999999999987 999999999 79999999999999999999999999999999999888764
Q ss_pred EEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCccccc
Q 006890 82 WKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQ 159 (627)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~~ 159 (627)
+++......+.+.+|+.+.++.. ++||||+..+++..++.|++.+ . .
T Consensus 66 ~~v~~~~~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l-----~---~----------------------- 114 (361)
T PRK09795 66 YQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL-----N---A----------------------- 114 (361)
T ss_pred ceEEEecCCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc-----C---c-----------------------
Confidence 23332323334556777666532 5788888777765554332210 0 0
Q ss_pred cccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHh
Q 006890 160 QIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISF 239 (627)
Q Consensus 160 ~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~ 239 (627)
T Consensus 115 -------------------------------------------------------------------------------- 114 (361)
T PRK09795 115 -------------------------------------------------------------------------------- 114 (361)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcCCHHHHHHH
Q 006890 240 LKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGL 319 (627)
Q Consensus 240 l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK~~~Ei~~~ 319 (627)
++++. .+..+|+||||+||+.|
T Consensus 115 --------------------------------------------------------~~~~~--~~~~lR~iKs~~Ei~~~ 136 (361)
T PRK09795 115 --------------------------------------------------------KLVSA--TPDVLRQIKTPEEVEKI 136 (361)
T ss_pred --------------------------------------------------------ccccc--cHHHHhcCCCHHHHHHH
Confidence 00000 13568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccC
Q 006890 320 KKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVG 399 (627)
Q Consensus 320 r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G 399 (627)
|+|+++++.++..+...+ ++|+||.|+++.++..+. ..|....+|++|+++|
T Consensus 137 r~a~~i~~~~~~~~~~~i---------------------------~~G~tE~e~~~~~~~~~~-~~G~~~~~f~~iv~sG 188 (361)
T PRK09795 137 RLACGIADRGAEHIRRFI---------------------------QAGMSEREIAAELEWFMR-QQGAEKASFDTIVASG 188 (361)
T ss_pred HHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHH-HCCCCcCCCCeEEEEe
Confidence 999999999998877664 799999999999988764 5677788999999999
Q ss_pred CCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCC--CCHH---HHHHHHHHHHHHHHHHhccCCCCc
Q 006890 400 PNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGK--PSAH---EKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 400 ~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~--p~~e---~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
+|++.||+.|++ ++|++||+|++|+|+.|+||++|+||||++|. ++++ ++++|+.+++++.+++++++| |+
T Consensus 189 ~~~~~ph~~~~~---~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~ 264 (361)
T PRK09795 189 WRGALPHGKASD---KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GV 264 (361)
T ss_pred ccccccCCCCCC---ceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 999999999976 89999999999999999999999999999963 2333 789999999999999999998 99
Q ss_pred ccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 475 CGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++++||.++++++++.|+ .|.|++||||| |++||.|.+. .+ ++.+|+|||||++|||+|.++.+|+||||+|+|
T Consensus 265 ~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~-~~-~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 265 RCQQVDDAARRVITEAGYGDYFGHNTGHAIG--IEVHEDPRFS-PR-DTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred cHHHHHHHHHHHHHHcCCCccCCCCCCccCC--ccccCCCCcC-CC-CCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 999999999999999999 47899999999 9999999864 33 789999999999999999999999999999999
Q ss_pred ecCCcccccCCcceeeeeccccccccc
Q 006890 553 TDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 553 ~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
|++|+ |+||..|.++
T Consensus 341 t~~G~------------e~Lt~~~~~l 355 (361)
T PRK09795 341 TPQGA------------EVLYAMPKTV 355 (361)
T ss_pred CCCCc------------EeCcCCCceE
Confidence 99998 8999888755
|
|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-60 Score=510.20 Aligned_cols=361 Identities=28% Similarity=0.388 Sum_probs=295.1
Q ss_pred ccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCccee-EEEEEE-CCceEEEEeCCCCCHHHHHhh
Q 006890 163 FAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVH-AFAIVT-TNAAFLYVDKRKVSSEVISFL 240 (627)
Q Consensus 163 ~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~-a~~lv~-~~~~~L~v~~~~~~~~~~~~l 240 (627)
++......|+.+++..|++.+.|++++++..|+.|+||+... +... ..++++ .++++|+++..+.........
T Consensus 5 ~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 79 (384)
T COG0006 5 FADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAF-----GFERLQALLVPAEGEPVLFVRGRDEEAAKETSW 79 (384)
T ss_pred cchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCC-----cccceEEEEEcCCCceEEEEcchhHHHHHhhcc
Confidence 445567789999999999999999999999999999998841 1111 233444 445899999887544322211
Q ss_pred hhCCeEEeeCCchhH------HHHHHhhccCCCCCCCCCCCEEEEcCCC--CcHHHHhhcC----CCeEEecCCccchhh
Q 006890 241 KESGVEVRDYDAVSS------DVVLLQSNQLNPPADVQGSDLIWADPNS--CSYALYSKLN----SDKVLLQQSPLALAK 308 (627)
Q Consensus 241 ~~~~v~v~~y~~~~~------~~~~~~~~~l~~~~~~~~~~~I~iD~~~--~~~~~~~~l~----~~~~~~~~~~i~~~r 308 (627)
.....+..|.+-.+ .+..+.... . .....++++... .+...+..+. ..++++.++++..+|
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR 152 (384)
T COG0006 80 -IKLENVEVYEDDEDPAAPLDLLGALLEEL-G-----LAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDLVDRLR 152 (384)
T ss_pred -cccCceEEEecCCccccHHHHHHHHHHhc-c-----ccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHHHHHHH
Confidence 11012333332222 222222111 0 135678888764 4555554443 347899999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCC
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFR 388 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~ 388 (627)
+|||+.||+.||+|+.+++.|+.++++++ ++|+||.|++++++..+. ..|..
T Consensus 153 ~iKs~~EI~~ir~A~~i~~~a~~~~~~~~---------------------------~~g~tE~ev~a~l~~~~~-~~G~~ 204 (384)
T COG0006 153 LIKSPAEIAKIRKAAEIADAALEAALEAI---------------------------RPGMTEAEIAAELEYALR-KGGAE 204 (384)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHH-HcCCC
Confidence 99999999999999999999999999986 689999999999999874 45667
Q ss_pred CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhc
Q 006890 389 GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNA 468 (627)
Q Consensus 389 ~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~ 468 (627)
++||.+|+++|+|+++|||.|++ +.+++||+|++|+|++|.||+||+||||++|+|+++|+++|+.|++||.+++++
T Consensus 205 ~~sf~~iv~~G~n~a~pH~~~~~---~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~ 281 (384)
T COG0006 205 GPSFDTIVASGENAALPHYTPSD---RKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAA 281 (384)
T ss_pred ccCcCcEEeccccccCcCCCCCc---ccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77999999999999999999987 888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEE
Q 006890 469 VFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRL 546 (627)
Q Consensus 469 ~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~Gvri 546 (627)
+|| |+++.+||.++|+++++.|+ +|.|++|||||+++++||.|..+..+ +..+|+||||||+|||+|.+|.+||||
T Consensus 282 ~rp-G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~~-~~~~L~~GMv~t~Epg~y~~g~~GirI 359 (384)
T COG0006 282 IRP-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSPG-SDTTLEPGMVFSIEPGIYIPGGGGVRI 359 (384)
T ss_pred hCC-CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccCCC-CCccccCCcEEEeccccccCCCceEEE
Confidence 998 99999999999999999665 89999999999999999999633433 789999999999999999999999999
Q ss_pred eEeeEEecCCcccccCCcceeeeecccccccccc
Q 006890 547 ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 547 Ed~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~ 580 (627)
||+|+||++|+ |+||..|.+..
T Consensus 360 Ed~vlVte~G~------------e~LT~~~~~~~ 381 (384)
T COG0006 360 EDTVLVTEDGF------------EVLTRVPKELL 381 (384)
T ss_pred EEEEEEcCCCc------------eecccCCccee
Confidence 99999999985 99996666543
|
|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=481.45 Aligned_cols=364 Identities=16% Similarity=0.197 Sum_probs=288.9
Q ss_pred cccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEE-CCceEEEEeCCCCCHHHHH-h
Q 006890 162 EFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVT-TNAAFLYVDKRKVSSEVIS-F 239 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~-~~~~~L~v~~~~~~~~~~~-~ 239 (627)
.|+-.++.+|++++|+.|+++++|++++++++|+.||||+.+.. +. ...+++|+ .+++.++++..+....... +
T Consensus 5 ~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~--~~--~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~ 80 (391)
T TIGR02993 5 FFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS--FY--VHQCVLLPPEGEPIWYGRGQDANGAKRTAF 80 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc--eE--EEEEEEEcCCCceEEEehhhhhhhHhheee
Confidence 46667899999999999999999999999999999999998642 11 12456666 5567777765543322111 1
Q ss_pred hhhCCeEEeeCCch------hHHHHHHhhccCCCCCCCCCCCEEEEcCCC--CcHHHHhhc----CCCeEEecCCccchh
Q 006890 240 LKESGVEVRDYDAV------SSDVVLLQSNQLNPPADVQGSDLIWADPNS--CSYALYSKL----NSDKVLLQQSPLALA 307 (627)
Q Consensus 240 l~~~~v~v~~y~~~------~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~--~~~~~~~~l----~~~~~~~~~~~i~~~ 307 (627)
+ ...++..|.+. .+....++ +.+..++ ....+||+|.+. +++..+..| +..++++++..+..+
T Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g--~~~~~ig~e~~~~~~~~~~~~~l~~~l~~~~~~d~~~~~~~l 155 (391)
T TIGR02993 81 M--DHDNIVGYPDHYVQSTERHPMDYLS-EILQDRG--WDSLTIGVEMDNYYFSAAAFASLQKHLPNARFVDATALVNWQ 155 (391)
T ss_pred c--cccceeecccccccCCCCCHHHHHH-HHHHhcC--CCCCcEEEecCCCccCHHHHHHHHHhCCCCEEEehHHHHHHH
Confidence 1 11234444432 11222222 1222211 134579999774 677766655 446899999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh---h
Q 006890 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS---K 384 (627)
Q Consensus 308 r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~---~ 384 (627)
|+|||++||++||+|+++++.++.++.+.+ ++|+||.|+++.+...... .
T Consensus 156 R~iKs~~EI~~lr~A~~i~~~~~~~~~~~i---------------------------~pG~tE~ei~~~~~~~~~~~~~~ 208 (391)
T TIGR02993 156 RAVKSETEISYMRVAARIVEKMHQRIFERI---------------------------EPGMRKCDLVADIYDAGIRGVDG 208 (391)
T ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------cCCCCHHHHHHHHHHhhhhcccC
Confidence 999999999999999999999999887765 7999999999998653221 1
Q ss_pred cCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHH
Q 006890 385 EHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIA 464 (627)
Q Consensus 385 ~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~ 464 (627)
.|...++|.+|++||+|++.+|+.|++ ++|++||++++|+|+.|+||++|+||||++|+|+++++++|+.+++++.+
T Consensus 209 ~g~~~~~~~~iv~sG~~~a~pH~~~~~---~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~ 285 (391)
T TIGR02993 209 FGGDYPAIVPLLPSGADASAPHLTWDD---SPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEA 285 (391)
T ss_pred cCCCcCCcccccccCccccCCCCCCCC---CcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 233356778899999999999999876 89999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCC----CcCCCCCCCCcccCCcEEeeCceeeecC
Q 006890 465 LGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGP----QSISFKPRNVPIHASMTATDEPGYYEDG 540 (627)
Q Consensus 465 ~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P----~~~~~~~~~~~l~~Gmv~siEPg~y~~~ 540 (627)
++++++| |+++++|+.++++++.+.|+...|++||||| +++|+.+ ..++.+ ++.+|++||||++|||+|.++
T Consensus 286 ~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~l~~~-~~~~L~~GMv~tvEpgiy~~~ 361 (391)
T TIGR02993 286 GLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMSLRPG-DNTVLKPGMTFHFMTGLWMED 361 (391)
T ss_pred HHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCccccccCC-CCceecCCCEEEEcceeEeCC
Confidence 9999998 9999999999999999999977899999999 9887432 223333 678999999999999999987
Q ss_pred ccEEEEeEeeEEecCCcccccCCcceeeeeccccccccccc
Q 006890 541 NFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKM 581 (627)
Q Consensus 541 ~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~ 581 (627)
+|+||||+|+||++|+ |.||..|.++..
T Consensus 362 -~Gvried~v~VT~~G~------------e~Lt~~p~~l~~ 389 (391)
T TIGR02993 362 -WGLEITESILITETGV------------ECLSSVPRKLFV 389 (391)
T ss_pred -CCeEEeeEEEECCCcc------------eecccCCcccEe
Confidence 6999999999999998 899999977643
|
Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown. |
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-55 Score=472.40 Aligned_cols=359 Identities=19% Similarity=0.207 Sum_probs=285.7
Q ss_pred HHHHHHHHhhccCCcEEEEecCCccceEEccccCC-CCCCcceeEEEEEECC-c-eE-EEEeCCCCCHHHHHhhhhCCeE
Q 006890 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTD-VPYCPVVHAFAIVTTN-A-AF-LYVDKRKVSSEVISFLKESGVE 246 (627)
Q Consensus 171 ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d-~~~~P~~~a~~lv~~~-~-~~-L~v~~~~~~~~~~~~l~~~~v~ 246 (627)
-++++|+.|+++|+|++++++++|++||||+.+.. ..++|...+.++|+.+ + +. ++++..+......+......-+
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~~~~~~~~~~~~~~ 91 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAASLTLDMPNAELKT 91 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhhhhccccccccccc
Confidence 37899999999999999999999999999998754 2344544466788755 3 55 5556555443221111000001
Q ss_pred EeeCCc---hh------------------HHHH-HHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEec
Q 006890 247 VRDYDA---VS------------------SDVV-LLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQ 300 (627)
Q Consensus 247 v~~y~~---~~------------------~~~~-~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~ 300 (627)
+..|.+ .+ +.+. .++ ..+.+++ ..+++||+|.+..+...++.| +..+++++
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~--~~~~~igve~~~~~~~~~~~l~~~lp~~~~~d~ 168 (406)
T PRK14575 92 FPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILK-DALNDAR--VLNKKIAIDLNIMSNGGKRVIDAVMPNVDFVDS 168 (406)
T ss_pred CCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHH-HHHHhcC--CcCCEEEEccCCCCHHHHHHHHHhCCCCeEEEc
Confidence 223322 11 1100 111 1221111 246799999888887777655 45679999
Q ss_pred CCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHH
Q 006890 301 QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESF 380 (627)
Q Consensus 301 ~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~ 380 (627)
+..+..+|+|||+.||+.||+|++++++++.++++.+ ++|+||.|+++.+...
T Consensus 169 ~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i---------------------------~pG~tE~elaa~~~~~ 221 (406)
T PRK14575 169 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI---------------------------RVGCTSAELTAAYKAA 221 (406)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999998887764 7999999999999776
Q ss_pred HHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 381 RASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 381 ~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
... .+....++.+++++|++ +.+|+.|++ +++++||+|++|+|+.|+||++|+||||++|+||++|+++|+.+++
T Consensus 222 ~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~ 296 (406)
T PRK14575 222 VMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRT 296 (406)
T ss_pred HHH-cCCCcCCcCceEEECCC-cccCCCCCC---CcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHH
Confidence 533 33333444478889988 568998875 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~ 538 (627)
++.+++++++| |+++++|+.++++++++.|+ .+.|++|||||+++++||.|.+.. + ++.+|+|||||++|||+|.
T Consensus 297 a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~-~-~~~~Le~GMv~tiEpgiy~ 373 (406)
T PRK14575 297 GHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST-H-ATESFTSGMVLSLETPYYG 373 (406)
T ss_pred HHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC-C-CCCCcCCCCEEEECCeeec
Confidence 99999999998 99999999999999999999 367999999997789999998754 3 6789999999999999999
Q ss_pred cCccEEEEeEeeEEecCCcccccCCcceeeeeccccccccc
Q 006890 539 DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 539 ~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
++.+|+|+||+|+||++|+ |.||..|.++
T Consensus 374 ~g~gGvriEDtvlVT~~G~------------e~LT~~p~~l 402 (406)
T PRK14575 374 YNLGSIMIEDMILINKEGI------------EFLSKLPRDL 402 (406)
T ss_pred CCCcEEEEEeEEEEcCCCc------------ccCCCCCccc
Confidence 9999999999999999997 8999888654
|
|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=460.26 Aligned_cols=358 Identities=19% Similarity=0.182 Sum_probs=281.7
Q ss_pred HHHHHHHhhccCCcEEEEecCCccceEEccccCCCC-CCcceeEEEEEECC--ce-EEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 172 LKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVP-YCPVVHAFAIVTTN--AA-FLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 172 i~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~-~~P~~~a~~lv~~~--~~-~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
-+++|++|+++++|++++++++||+||||+.+..+. +.+....+++++.+ ++ .++++..+............--++
T Consensus 13 ~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~~~~~~~~~~~~~~ 92 (405)
T PRK14576 13 SRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAASTHFDMPNSVLKTF 92 (405)
T ss_pred HHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhhhhccccccccccC
Confidence 578999999999999999999999999999865322 33434455555544 35 556655543332100000000012
Q ss_pred eeCCch---h-----------------HHH-HHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhh----cCCCeEEecCC
Q 006890 248 RDYDAV---S-----------------SDV-VLLQSNQLNPPADVQGSDLIWADPNSCSYALYSK----LNSDKVLLQQS 302 (627)
Q Consensus 248 ~~y~~~---~-----------------~~~-~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~----l~~~~~~~~~~ 302 (627)
..|.+. . +.+ ..+ .+.+.+++ ..+.+|++|.+.++...+.. ++..++++++.
T Consensus 93 ~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~g--~~~~rigve~~~~~~~~~~~l~~~~~~~~~vd~~~ 169 (405)
T PRK14576 93 PVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLV-KNALEDAG--VLDKTIAIELQAMSNGGKGVLDKVAPGLKLVDSTA 169 (405)
T ss_pred CceEeecCCcccchhhhccccCCCCcHHHHHHHH-HHHHHHhC--CCCCEEEEccCCCCHHHHHHHHhhCCCCeEEEcHH
Confidence 222211 0 111 111 12232222 24679999988777765544 45568999999
Q ss_pred ccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 303 ~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
.+..+|+|||+.||+.||+|+++++.++..+++.+ ++|+||.|+++.++..+.
T Consensus 170 ~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i---------------------------~pG~tE~elaa~~~~~~~ 222 (405)
T PRK14576 170 LFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKI---------------------------RVGCTAAELTAAFKAAVM 222 (405)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887764 799999999999987664
Q ss_pred hhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHH
Q 006890 383 SKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462 (627)
Q Consensus 383 ~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~ 462 (627)
. .|....++.+++++|+| +.+|+.|++ +.+++||+|++|+|+.|+||++|+||||++|+|+++|+++|+.+++++
T Consensus 223 ~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~ 297 (405)
T PRK14576 223 S-FPETNFSRFNLISVGDN-FSPKIIADT---TPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGH 297 (405)
T ss_pred H-cCCCcCCCCCEEEECCc-ccCCCCCCC---cccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3 33233444589999999 568998876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecC
Q 006890 463 IALGNAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDG 540 (627)
Q Consensus 463 ~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~ 540 (627)
.+++++++| |+++++|+.++++.+.+.|+ .+.|++|||||+++.+||.|.+. .+ ++.+|++||||++|||+|.+|
T Consensus 298 ~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~-~~-~~~~Le~GMv~~vEp~~y~~g 374 (405)
T PRK14576 298 EHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVS-TQ-ATETFCPGMVLSLETPYYGIG 374 (405)
T ss_pred HHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCCcC-CC-CCCccCCCCEEEECCceeecC
Confidence 999999998 99999999999999999998 35689999999888999999853 33 678999999999999999999
Q ss_pred ccEEEEeEeeEEecCCcccccCCcceeeeeccccccccc
Q 006890 541 NFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 541 ~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
.+|+|+||+|+||++|+ |.||..|.++
T Consensus 375 ~ggvriEDtvlVTe~G~------------e~LT~~p~~l 401 (405)
T PRK14576 375 VGSIMLEDMILITDSGF------------EFLSKLDRDL 401 (405)
T ss_pred CCEEEEeeEEEECCCcc------------ccCCCCCccc
Confidence 99999999999999998 8999988754
|
|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-50 Score=435.79 Aligned_cols=349 Identities=21% Similarity=0.284 Sum_probs=269.1
Q ss_pred CcHHHHHHHHHHHhhccCCcEEEEecCC----------------ccceEEccccCCCCCCcceeEEEEEEC-C----ceE
Q 006890 166 SSVVEKLKELREKLTNEKARGIIITTLD----------------EVAWLYNIRGTDVPYCPVVHAFAIVTT-N----AAF 224 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~d~lll~~~d----------------ni~wLtg~rg~d~~~~P~~~a~~lv~~-~----~~~ 224 (627)
.++..|.++|.+.|... ..+++.+.+ |+.||||+.-.+ +.+++.+ + +.+
T Consensus 4 ~~~~~rR~~l~~~~~~~--~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~~~ 73 (438)
T PRK10879 4 QEFQRRRQALLAKMQPG--SAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNHSV 73 (438)
T ss_pred HHHHHHHHHHHhhCCCC--cEEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCeEE
Confidence 46788999999998652 244544432 689999876433 5555532 2 368
Q ss_pred EEEeCCCCCHHH--------HHhhhhCCeE-EeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCC------cHHHH
Q 006890 225 LYVDKRKVSSEV--------ISFLKESGVE-VRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSC------SYALY 289 (627)
Q Consensus 225 L~v~~~~~~~~~--------~~~l~~~~v~-v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~------~~~~~ 289 (627)
||+++.....++ ++.....|++ +.+++++.+.+..+..+ ...+..+.+.. .....
T Consensus 74 Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 143 (438)
T PRK10879 74 LFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNG----------LDVVYHAQGEYAYADEIVFSAL 143 (438)
T ss_pred EEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcC----------CceEEecCCccccchhHHHHHH
Confidence 999877644331 1112224554 77777777766655421 22344443321 11222
Q ss_pred hhcC---------CCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Q 006890 290 SKLN---------SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEK 360 (627)
Q Consensus 290 ~~l~---------~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 360 (627)
..+. ...+++....+..+|+||||+||+.||+|+++++.++.++++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~----------------------- 200 (438)
T PRK10879 144 EKLRKGSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKC----------------------- 200 (438)
T ss_pred HHHHhhhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 2221 12466777889999999999999999999999999999887764
Q ss_pred ccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEE
Q 006890 361 KHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITR 440 (627)
Q Consensus 361 ~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tR 440 (627)
++|+||.|+++.+..... ..|...++|++|+++|+|++++||.|++ ++|++||+|++|+|+.|+||++|+||
T Consensus 201 ----~pG~tE~ei~a~~~~~~~-~~G~~~~~~~~iv~~G~na~~~H~~~~~---~~l~~GDlVliD~G~~~~GY~sDitR 272 (438)
T PRK10879 201 ----RPGMFEYQLEGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---SEMRDGDLVLIDAGCEYKGYAGDITR 272 (438)
T ss_pred ----CCCCcHHHHHHHHHHHHH-HCCCCCCCCCcEEEEcCccccccCCCCc---cccCCCCEEEEEeCeEECCEEEEeEE
Confidence 789999999999887653 4566678999999999999999999875 89999999999999999999999999
Q ss_pred EEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHH----Hc--------------CC--CCccccc
Q 006890 441 TFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW----KY--------------GL--DYRHGTG 499 (627)
Q Consensus 441 T~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~----~~--------------G~--~~~h~~G 499 (627)
||++ |++|++|+++|++|++++.+++++++| |+++++|+.++++.+. +. ++ .|+|++|
T Consensus 273 T~~v~G~~s~~q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~G 351 (438)
T PRK10879 273 TFPVNGKFTPAQREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLS 351 (438)
T ss_pred EEEECCcCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCc
Confidence 9998 899999999999999999999999998 9999999999886543 22 33 5899999
Q ss_pred ccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecC---------ccEEEEeEeeEEecCCcccccCCcceeeee
Q 006890 500 HGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDG---------NFGIRLENVLVVTDANTKFNFGDKGYLSFE 570 (627)
Q Consensus 500 HgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~---------~~GvriEd~v~V~~~g~~~~~~~~~~~~fe 570 (627)
|||| |++||.|... .+ ++.+|+||||||+|||+|.+. .+||||||+|+||++|+ |
T Consensus 352 H~iG--ldvHd~~~~~-~~-~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~G~------------e 415 (438)
T PRK10879 352 HWLG--LDVHDVGVYG-QD-RSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITETGN------------E 415 (438)
T ss_pred cccC--cCcCcCCCcC-CC-CCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCCcC------------e
Confidence 9999 9999998753 22 578999999999999999863 36999999999999998 8
Q ss_pred cccc-cccccccc
Q 006890 571 HITW-APYQIKMI 582 (627)
Q Consensus 571 ~lT~-~p~~~~~i 582 (627)
+||. +|.+.+.|
T Consensus 416 ~LT~~~pk~~~~i 428 (438)
T PRK10879 416 NLTASVVKKPDEI 428 (438)
T ss_pred EcCccCCCCHHHH
Confidence 9994 89855433
|
|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-49 Score=411.33 Aligned_cols=260 Identities=21% Similarity=0.224 Sum_probs=230.7
Q ss_pred CCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 006890 273 GSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGAS 348 (627)
Q Consensus 273 ~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~ 348 (627)
.+++||+|.+.+++..++.| +..+++++++++..+|+||||+||+.||+|+++++.++..+++.+
T Consensus 54 ~~~rigve~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i----------- 122 (323)
T PRK15173 54 LNKKIAIDLNIMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI----------- 122 (323)
T ss_pred cCCEEEEecCccCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 46799999988888777766 446899999999999999999999999999999999998877654
Q ss_pred ccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeec
Q 006890 349 GYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428 (627)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g 428 (627)
++|+||.|+++.+...... .+....++.+++++|+++ .+|+.|++ +.+++||+|++|+|
T Consensus 123 ----------------~~G~tE~el~a~~~~~~~~-~g~~~~~~~~~i~~G~~~-~~h~~~~~---~~l~~Gd~V~iD~g 181 (323)
T PRK15173 123 ----------------RVGCTSAELTAAYKAAVMS-KSETHFSRFHLISVGADF-SPKLIPSN---TKACSGDLIKFDCG 181 (323)
T ss_pred ----------------cCCCCHHHHHHHHHHHHHH-cCCCCCCCCcEEEECCCC-ccCCCCCC---CccCCCCEEEEEeC
Confidence 7899999999999765533 343334444678889884 68988875 89999999999999
Q ss_pred ceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccC
Q 006890 429 AQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYL 506 (627)
Q Consensus 429 ~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l 506 (627)
++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++++++++.|+ .+.|++|||||+++
T Consensus 182 ~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~l 260 (323)
T PRK15173 182 VDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFL 260 (323)
T ss_pred ccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999999998 99999999999999999998 35688999999888
Q ss_pred ccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCcccccCCcceeeeeccccccccc
Q 006890 507 NVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 507 ~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
++||.|.+... ++.+|++||||++|||+|.++.+|+|+||+|+||++|+ |.||..|.++
T Consensus 261 g~~E~P~i~~~--~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~G~------------e~LT~~p~~l 319 (323)
T PRK15173 261 GLEESPFVSTH--ATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKEGI------------EFLSKLPRDL 319 (323)
T ss_pred CcCCCCCCCCC--CCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCCcc------------eeCCCCCccc
Confidence 99999987543 67899999999999999999999999999999999997 8999988754
|
|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=369.16 Aligned_cols=216 Identities=18% Similarity=0.200 Sum_probs=195.3
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCC
Q 006890 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHF 387 (627)
Q Consensus 308 r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~ 387 (627)
-.||||+||+.||+|+++++.++..+++.+ ++|+||.|+++.++..+.. .|.
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~---------------------------~~G~tE~el~~~~~~~~~~-~G~ 53 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIM---------------------------KPGITTKEINTFVEAYLEK-HGA 53 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhc---------------------------CCCCcHHHHHHHHHHHHHH-cCC
Confidence 379999999999999999999998877654 7999999999999887643 343
Q ss_pred C-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHH
Q 006890 388 R-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462 (627)
Q Consensus 388 ~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~ 462 (627)
. ..+|++++++|+|++.+||.|++ ++|++||+|++|+|+.|+||++|+||||++|+|+++|+++|+.+++++
T Consensus 54 ~~~~~~~~~~~~~i~~g~n~~~~H~~p~~---~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~ 130 (248)
T PRK12897 54 TSEQKGYNGYPYAICASVNDEMCHAFPAD---VPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENAL 130 (248)
T ss_pred cccccccCCCCcceEeccCCEeecCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3 24788889999999999999986 899999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceee--
Q 006890 463 IALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYY-- 537 (627)
Q Consensus 463 ~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y-- 537 (627)
.+++++++| |+++++++.++++++++.|+ .+.|++||||| +++||.|.+.... + ++.+|+|||||++|||+|
T Consensus 131 ~~~i~~~kp-G~~~~dv~~a~~~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~ 207 (248)
T PRK12897 131 YKGIDQAVI-GNRVGDIGYAIESYVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVG 207 (248)
T ss_pred HHHHHhhcC-CCccchHHHHHHHHHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecC
Confidence 999999998 99999999999999999999 46899999999 9999999875322 1 567899999999999999
Q ss_pred ---------------ecCccEEEEeEeeEEecCCc
Q 006890 538 ---------------EDGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 538 ---------------~~~~~GvriEd~v~V~~~g~ 557 (627)
.+|.+|+|+||||+||++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G~ 242 (248)
T PRK12897 208 MRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGP 242 (248)
T ss_pred CCceEECCCCcEEEcCCCCeEeecceEEEEeCCcc
Confidence 36778999999999999997
|
|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=389.36 Aligned_cols=223 Identities=25% Similarity=0.306 Sum_probs=192.1
Q ss_pred ecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHH
Q 006890 299 LQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLE 378 (627)
Q Consensus 299 ~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~ 378 (627)
+....+..+|+|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.+.
T Consensus 150 ~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i---------------------------~pG~tE~ei~~~~~ 202 (443)
T PRK13607 150 GVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAF---------------------------RAGMSEFDINLAYL 202 (443)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------hcCCCHHHHHHHHH
Confidence 345678899999999999999999999999998887764 68999999998765
Q ss_pred HHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHH
Q 006890 379 SFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAV 458 (627)
Q Consensus 379 ~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v 458 (627)
... ..+..+.+|++|+++|+|++++||.+++ .+.+++||+|++|+|+.|+||++|+||||+ |+++++++++|++|
T Consensus 203 ~~~--~~~~~~~~y~~iva~G~naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v 277 (443)
T PRK13607 203 TAT--GQRDNDVPYGNIVALNEHAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDV 277 (443)
T ss_pred HHh--CCCCcCCCCCcEEEecCcceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHH
Confidence 432 2344567999999999999999999875 246899999999999999999999999999 88999999999999
Q ss_pred HHHHHHHHhccCCCCcccchHHHHHHHHHH----Hc--------------CC---CCcccccccccccCccccCCCcCC-
Q 006890 459 LKGHIALGNAVFPNGTCGHTLDILARLPLW----KY--------------GL---DYRHGTGHGVGSYLNVHEGPQSIS- 516 (627)
Q Consensus 459 ~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~----~~--------------G~---~~~h~~GHgvG~~l~vhE~P~~~~- 516 (627)
++++.+++++++| |+++.+|+.++++.+. +. |+ .|+|++||||| |++||.|....
T Consensus 278 ~~aq~aai~~ikP-G~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~ 354 (443)
T PRK13607 278 NKEQLALIATMKP-GVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQD 354 (443)
T ss_pred HHHHHHHHHHccC-CCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccc
Confidence 9999999999998 9999999999987663 22 33 47999999999 99999753211
Q ss_pred --------------CCCCCCcccCCcEEeeCceeeecC-------------------------ccEEEEeEeeEEecCCc
Q 006890 517 --------------FKPRNVPIHASMTATDEPGYYEDG-------------------------NFGIRLENVLVVTDANT 557 (627)
Q Consensus 517 --------------~~~~~~~l~~Gmv~siEPg~y~~~-------------------------~~GvriEd~v~V~~~g~ 557 (627)
.+ ...+|+||||||+|||+|+++ .+||||||+|+||++|+
T Consensus 355 ~~~~~~~~~~~~~~l~-~~~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~ 433 (443)
T PRK13607 355 DRGTHLAAPEKHPYLR-CTRVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGV 433 (443)
T ss_pred cccccccccccccccc-cCCcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCC
Confidence 01 457899999999999999964 67999999999999998
|
|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=356.67 Aligned_cols=216 Identities=58% Similarity=1.041 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCC--cCHHHHHHHHHHHHHhhcCCCCCcCCcc
Q 006890 318 GLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVK--LTEVTVSDKLESFRASKEHFRGLSFPTI 395 (627)
Q Consensus 318 ~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~tE~ei~~~l~~~~~~~~g~~~~~f~~i 395 (627)
+||.|+..++.++.+.++++.+.+ ++| +||.||++.+++++....++.+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i-----------------------~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~ 57 (224)
T cd01085 1 GMRAAHIRDGVALVEFLAWLEQEV-----------------------PKGETITELSAADKLEEFRRQQKGYVGLSFDTI 57 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh-----------------------ccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceE
Confidence 378899999988888888876543 789 9999999999987754455666789999
Q ss_pred cccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 006890 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTC 475 (627)
Q Consensus 396 ~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~ 475 (627)
+++|+|++++|+.|+..++++|++||+|++|+|+.|+||++|+||||++|+|+++|+++|+.++++++++++.++|+|++
T Consensus 58 v~~g~n~~~~H~~p~~~~~r~l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 137 (224)
T cd01085 58 SGFGPNGAIVHYSPTEESNRKISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTT 137 (224)
T ss_pred EEecCccCcCCCCcCcccCcccCCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999843348999999999999999999999999999999999999999999999999999888655999
Q ss_pred cchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcC-CCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEec
Q 006890 476 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSI-SFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554 (627)
Q Consensus 476 ~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~-~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~ 554 (627)
+.+++.++++.+.+.|++|.|++|||||.+|++||.|.++ ..+ ++.+|+|||||++||++|.++.+|+|+||+|+||+
T Consensus 138 ~~~v~~~~~~~~~~~g~~~~h~~GHgIG~~l~~hE~P~i~~~~~-~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~ 216 (224)
T cd01085 138 GSQLDALARQPLWKAGLDYGHGTGHGVGSFLNVHEGPQSISPAP-NNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVE 216 (224)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCCCCCCcCCcCC-CCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEee
Confidence 9999999999999999999999999999766899999875 333 67899999999999999999999999999999999
Q ss_pred CCc
Q 006890 555 ANT 557 (627)
Q Consensus 555 ~g~ 557 (627)
+|+
T Consensus 217 ~G~ 219 (224)
T cd01085 217 AET 219 (224)
T ss_pred CCc
Confidence 997
|
E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide. |
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=368.09 Aligned_cols=228 Identities=17% Similarity=0.193 Sum_probs=200.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc-
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE- 385 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~- 385 (627)
|..+|||+||+.||+|+++++.++..+.+.+ +||+||.||++.++....+.+
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i---------------------------~pG~te~ei~~~~~~~~~~~g~ 53 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLI---------------------------KPGVDMWEVEEYVRRRCKEENV 53 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCcHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999988876654 799999999999987654321
Q ss_pred -----CCC--CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecc---------------------------ee
Q 006890 386 -----HFR--GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGA---------------------------QY 431 (627)
Q Consensus 386 -----g~~--~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~---------------------------~y 431 (627)
|+. ..+|++++++|.|++++|+.|++ ++|++||+|++|+|+ .|
T Consensus 54 ~~~~~G~~~~~~~f~~~v~~G~n~~~~H~~p~~---~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~ 130 (286)
T PRK07281 54 LPLQIGVDGAMMDYPYATCCGLNDEVAHAFPRH---YILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESY 130 (286)
T ss_pred cccccCCCCcccCCCcceEEeccccccCCCCCC---cCcCCCCEEEEEeccccccccccccccccccccccccccccccc
Confidence 122 26899999999999999999986 899999999999997 48
Q ss_pred cCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCcccc
Q 006890 432 QDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHE 510 (627)
Q Consensus 432 ~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE 510 (627)
+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++++++.+.|+ .+.|++||||| +++||
T Consensus 131 ~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE 207 (286)
T PRK07281 131 RGGLADSCWAYAVGTPSDEVKNLMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHE 207 (286)
T ss_pred CCEEeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCC
Confidence 9999999999999999999999999999999999999998 99999999999999999998 46799999999 99999
Q ss_pred CCCcCCCC-C-CCCcccCCcEEeeCceeee------------------cCccEEEEeEeeEEecCCcccccCCcceeeee
Q 006890 511 GPQSISFK-P-RNVPIHASMTATDEPGYYE------------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570 (627)
Q Consensus 511 ~P~~~~~~-~-~~~~l~~Gmv~siEPg~y~------------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe 570 (627)
.|.+.... + ++.+|+|||||++|||+|. +|.+|+|+||+|+||++|+ |
T Consensus 208 ~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~------------e 275 (286)
T PRK07281 208 EPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGP------------V 275 (286)
T ss_pred CCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCCcc------------e
Confidence 99874321 1 5678999999999999986 4567899999999999997 8
Q ss_pred ccccccccc
Q 006890 571 HITWAPYQI 579 (627)
Q Consensus 571 ~lT~~p~~~ 579 (627)
.||..+.++
T Consensus 276 ~LT~~~~~~ 284 (286)
T PRK07281 276 ILTSQGEER 284 (286)
T ss_pred ECCCCCccc
Confidence 898766544
|
|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=364.37 Aligned_cols=227 Identities=20% Similarity=0.212 Sum_probs=199.2
Q ss_pred cchhhh-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 304 LALAKA-IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 304 i~~~r~-iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
+..++. ||||+||+.||+|+++++.++.++++.+ ++|+||.||++.+..+..
T Consensus 36 ~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~i---------------------------rpG~tE~Eiaa~~~~~~~ 88 (291)
T PRK12318 36 ASQYDIIIKTPEQIEKIRKACQVTARILDALCEAA---------------------------KEGVTTNELDELSRELHK 88 (291)
T ss_pred cCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHH
Confidence 444555 9999999999999999999998887664 799999999988876653
Q ss_pred hhcCC-------CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHH
Q 006890 383 SKEHF-------RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACY 455 (627)
Q Consensus 383 ~~~g~-------~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y 455 (627)
. .|. .+.+|++++++|.|++++|+.|++ ++|++||+|++|+|+.|.||++|+||||++|+|+++|+++|
T Consensus 89 ~-~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~---~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~ 164 (291)
T PRK12318 89 E-YNAIPAPLNYGSPPFPKTICTSLNEVICHGIPND---IPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVC 164 (291)
T ss_pred H-cCCCccccccCCCCCCcceEeeccceeecCCCCC---CccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHH
Confidence 2 232 235798999999999999999986 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC-CCCcccCCcEEeeC
Q 006890 456 TAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDE 533 (627)
Q Consensus 456 ~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~Gmv~siE 533 (627)
+.+++++.+++++++| |+++++|+.++++++++.|+. +.|.+||||| |++||.|.+....+ ++.+|+|||||++|
T Consensus 165 ~~~~~a~~~~i~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iE 241 (291)
T PRK12318 165 QASLECLNAAIAILKP-GIPLYEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIE 241 (291)
T ss_pred HHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEEC
Confidence 9999999999999998 999999999999999999984 5789999999 99999998865332 46789999999999
Q ss_pred ceeeecC---------ccEEE---------EeEeeEEecCCcccccCCcceeeeecccccc
Q 006890 534 PGYYEDG---------NFGIR---------LENVLVVTDANTKFNFGDKGYLSFEHITWAP 576 (627)
Q Consensus 534 Pg~y~~~---------~~Gvr---------iEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p 576 (627)
|++|.++ .||+| +||||+||++|+ |.||..|
T Consensus 242 P~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~G~------------e~LT~~~ 290 (291)
T PRK12318 242 PMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITETGY------------EILTLLD 290 (291)
T ss_pred CEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCCcc------------eeCCCCC
Confidence 9999863 33345 699999999998 8898776
|
|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=354.83 Aligned_cols=215 Identities=20% Similarity=0.275 Sum_probs=192.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCC
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFR 388 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~ 388 (627)
+||||+||+.||+|++++++++..+++.+ ++|+||.|+++.+...+.+ .|..
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~tE~el~~~~~~~~~~-~G~~ 53 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREV---------------------------KPGVSTKELDRIAKDFIEK-HGAK 53 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHHH-CCCC
Confidence 69999999999999999999998877654 7999999999999876643 3422
Q ss_pred -----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHH
Q 006890 389 -----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 389 -----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~ 463 (627)
..+|++++++|+|++++||.|++ ++|++||+|++|+|++|.||++|+||||++|+|+++|+++|+.+++++.
T Consensus 54 ~~~~~~~~~~~~~~~~~n~~~~H~~~~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~ 130 (247)
T TIGR00500 54 PAFLGYYGFPGSVCISVNEVVIHGIPDK---KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLY 130 (247)
T ss_pred ccccCCCCCCceeEeccccEEEecCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 23578888999999999999985 8999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceeeec-
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYYED- 539 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y~~- 539 (627)
+++++++| |+++++|+.++++.+.+.|+. +.|.+||||| +.+||.|.+.... + ++.+|++||||++||++|.+
T Consensus 131 ~~~~~~kp-G~~~~~v~~~~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~ 207 (247)
T TIGR00500 131 KAIEEAKP-GNRIGEIGAAIQKYAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGT 207 (247)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCC
Confidence 99999998 999999999999999999994 6788999999 9999999764321 1 57899999999999999973
Q ss_pred ----------------CccEEEEeEeeEEecCCc
Q 006890 540 ----------------GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 540 ----------------~~~GvriEd~v~V~~~g~ 557 (627)
+.+|+|+||+|+||++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 208 EEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred CcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 568999999999999998
|
Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. |
| >KOG2737 consensus Putative metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=347.00 Aligned_cols=236 Identities=30% Similarity=0.427 Sum_probs=205.8
Q ss_pred CccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHH
Q 006890 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (627)
Q Consensus 302 ~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~ 381 (627)
..+...|.|||+.||+.||.|+++++.|+.++++.+ ++|+.|+++....+...
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~---------------------------~pg~~Eyq~eslF~hh~ 229 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAV---------------------------RPGMKEYQLESLFLHHS 229 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhC---------------------------CchHhHHhHHHHHHHhh
Confidence 457889999999999999999999999999999876 79999999999988765
Q ss_pred HhhcCCCCCcCCcccccCCCcccccc----cCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-CCCCHHHHHHHH
Q 006890 382 ASKEHFRGLSFPTISSVGPNAAIMHY----SPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPSAHEKACYT 456 (627)
Q Consensus 382 ~~~~g~~~~~f~~i~~~G~n~a~~h~----~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G~p~~e~~~~y~ 456 (627)
...+|+...+|.+|++||+|+++.|| .|++ +.|+.||+.++|.|+.|.+|++|||++|+. |+.|++||.+|+
T Consensus 230 y~~GGcRh~sYtcIc~sG~ns~vLHYgha~apNd---~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYn 306 (492)
T KOG2737|consen 230 YSYGGCRHLSYTCICASGDNSAVLHYGHAGAPND---RTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYN 306 (492)
T ss_pred hccCCccccccceeeecCCCcceeeccccCCCCC---cccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHH
Confidence 56788899999999999999999999 6654 899999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHhccCCCCcccchHHHHHHHHHH----HcCC----------------CCcccccccccccCcccc---CCC
Q 006890 457 AVLKGHIALGNAVFPNGTCGHTLDILARLPLW----KYGL----------------DYRHGTGHGVGSYLNVHE---GPQ 513 (627)
Q Consensus 457 ~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~----~~G~----------------~~~h~~GHgvG~~l~vhE---~P~ 513 (627)
+|+.++.+++++++| |+.+.+++.++.+++- +.|+ .++||.||-+| |+||| .|.
T Consensus 307 aVLda~navm~a~Kp-Gv~W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~ 383 (492)
T KOG2737|consen 307 AVLDASNAVMEAMKP-GVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPE 383 (492)
T ss_pred HHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCC
Confidence 999999999999998 9999999998876553 3343 57999999999 99998 221
Q ss_pred -cCCCC-C------CCCcccCCcEEeeCceeeec--------------------------CccEEEEeEeeEEecCCccc
Q 006890 514 -SISFK-P------RNVPIHASMTATDEPGYYED--------------------------GNFGIRLENVLVVTDANTKF 559 (627)
Q Consensus 514 -~~~~~-~------~~~~l~~Gmv~siEPg~y~~--------------------------~~~GvriEd~v~V~~~g~~~ 559 (627)
.-.+. | ..+.|++|||+|+|||+|+- +.+||||||.|+||++|.
T Consensus 384 ~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~-- 461 (492)
T KOG2737|consen 384 GVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGI-- 461 (492)
T ss_pred CCCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecccc--
Confidence 11111 1 35679999999999999961 468999999999999997
Q ss_pred ccCCcceeeeecccccccccccc
Q 006890 560 NFGDKGYLSFEHITWAPYQIKMI 582 (627)
Q Consensus 560 ~~~~~~~~~fe~lT~~p~~~~~i 582 (627)
|+||.+|.....|
T Consensus 462 ----------enlt~vprtveeI 474 (492)
T KOG2737|consen 462 ----------ENLTCVPRTVEEI 474 (492)
T ss_pred ----------ccccCCCCCHHHH
Confidence 9999999955444
|
|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=351.25 Aligned_cols=225 Identities=22% Similarity=0.235 Sum_probs=200.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
+-+||||+||+.||+|+++++.++..+++.+ ++|+||.|+++.+...... .|
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i---------------------------~pG~se~ela~~~~~~~~~-~G 53 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHV---------------------------KPGVTTKELDRIAEEYIRD-QG 53 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHHH-CC
Confidence 4579999999999999999999998877654 7899999999998876543 33
Q ss_pred C-----CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 387 F-----RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 387 ~-----~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
. ...+|++++++|.|+..+|+.|++ ++|++||+|++|+|+.|.||++|++||+++|+|+++++++|+.++++
T Consensus 54 ~~~~~~~~~~~~~~~~~g~~~~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~ 130 (252)
T PRK05716 54 AIPAPLGYHGFPKSICTSVNEVVCHGIPSD---KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEA 130 (252)
T ss_pred CEecccCCCCCCcCeEecccceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHH
Confidence 2 124677888999999999999876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCC-CC-CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISF-KP-RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~-~~-~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++++|+.++++.+++.|+. ..|.+||||| +.+||.|.+..+ .+ ++.+|+|||||++||++|.
T Consensus 131 ~~~~~~~~~p-G~~~~dv~~~~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~ 207 (252)
T PRK05716 131 LYLGIAAVKP-GARLGDIGHAIQKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINA 207 (252)
T ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEc
Confidence 9999999998 999999999999999999984 5688999999 999999977543 12 6789999999999999996
Q ss_pred -----------------cCccEEEEeEeeEEecCCcccccCCcceeeeeccccccc
Q 006890 539 -----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPY 577 (627)
Q Consensus 539 -----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~ 577 (627)
+|.+|+|+||+|+||++|+ |.||..|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G~------------e~Lt~~~~ 251 (252)
T PRK05716 208 GKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGP------------EILTLRPE 251 (252)
T ss_pred CCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCcc------------EEeeCCCC
Confidence 5778999999999999998 89998875
|
|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=339.58 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcC---
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF--- 392 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f--- 392 (627)
|+.||+|++++++++..+++.+ +||+||.|+++.+...+.+ .|..+.++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i---------------------------~pG~tE~ei~a~~~~~~~~-~ga~~~~~~~~ 52 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAI---------------------------REGVPEYEVALAGTQAMVR-EIAKTFPEVEL 52 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh---------------------------cCCCCHHHHHHHHHHHHHH-cCCccCCcccc
Confidence 6799999999999999887765 7999999999998776633 33222222
Q ss_pred ---CcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhcc
Q 006890 393 ---PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAV 469 (627)
Q Consensus 393 ---~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~ 469 (627)
.+++++|+|++.+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+.+++++.++++++
T Consensus 53 ~~~~~~v~~G~~~~~~H~~~~~---r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~ 129 (228)
T cd01090 53 MDTWTWFQSGINTDGAHNPVTN---RKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELI 129 (228)
T ss_pred cCcceEEEeeccccccCCCCCC---cccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3678999999999999875 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCc----CCCCCCCCcccCCcEEeeCceeeec----
Q 006890 470 FPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQS----ISFKPRNVPIHASMTATDEPGYYED---- 539 (627)
Q Consensus 470 ~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~----~~~~~~~~~l~~Gmv~siEPg~y~~---- 539 (627)
+| |+++++|++++++.+.++|+ .+.|++||||| +.+||.|.. +... ++.+|+|||||++||++|.+
T Consensus 130 rp-G~~~~~v~~a~~~~~~~~G~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~-~~~~Le~GMV~~iEP~i~~~~~~~ 205 (228)
T cd01090 130 KP-GARCKDIAAELNEMYREHDLLRYRTFGYGHSFG--VLSHYYGREAGLELRED-IDTVLEPGMVVSMEPMIMLPEGQP 205 (228)
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCcccccccCcccc--cccccCCCccccccCCC-CCCccCCCCEEEECCEEeecccCC
Confidence 98 99999999999999999998 46899999999 999998743 1222 56899999999999999984
Q ss_pred CccEEEEeEeeEEecCCc
Q 006890 540 GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 540 ~~~GvriEd~v~V~~~g~ 557 (627)
|.+|+|+||+|+||++|+
T Consensus 206 g~gG~ried~v~Vt~~G~ 223 (228)
T cd01090 206 GAGGYREHDILVINENGA 223 (228)
T ss_pred CCcEEEeeeEEEECCCcc
Confidence 789999999999999997
|
E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea. |
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=344.67 Aligned_cols=218 Identities=22% Similarity=0.180 Sum_probs=194.2
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
++++|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.+...... .
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i---------------------------~pG~te~el~~~~~~~~~~-~ 57 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAV---------------------------EPGMTTKELDRIAEKRLEE-H 57 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhc---------------------------cCCCCHHHHHHHHHHHHHH-C
Confidence 45689999999999999999999998877654 7999999999999876633 3
Q ss_pred CCC-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 386 HFR-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 386 g~~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
|.. ..+|++++++|.|...+|+.|++ ++|++||+|++|+|+.|.||++|++|||++|+|+++++++|+.+++
T Consensus 58 G~~~~~~~~~~~~~~~~~~~n~~~~h~~p~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~ 134 (255)
T PRK12896 58 GAIPSPEGYYGFPGSTCISVNEEVAHGIPGP---RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEE 134 (255)
T ss_pred CCEeCcccCCCCCcceEecCCCeeEecCCCC---ccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHH
Confidence 332 34677888889999999999876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCC--C-CCCcccCCcEEeeCcee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFK--P-RNVPIHASMTATDEPGY 536 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~--~-~~~~l~~Gmv~siEPg~ 536 (627)
++.+++++++| |+++++|+.++++.+.+.|+ .+.|.+||||| +.+||.|.++... + ++.+|++||||++||++
T Consensus 135 a~~~~~~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i 211 (255)
T PRK12896 135 ALWAGIKQVKA-GRPLNDIGRAIEDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFL 211 (255)
T ss_pred HHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceE
Confidence 99999999998 99999999999999999998 46789999999 9999999665321 2 56899999999999999
Q ss_pred e-----------------ecCccEEEEeEeeEEecCCc
Q 006890 537 Y-----------------EDGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 537 y-----------------~~~~~GvriEd~v~V~~~g~ 557 (627)
| .++.+|+|+||||+||++|+
T Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~~G~ 249 (255)
T PRK12896 212 NLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGP 249 (255)
T ss_pred EcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcCCcc
Confidence 8 46789999999999999997
|
|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=341.57 Aligned_cols=206 Identities=30% Similarity=0.392 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcc
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTI 395 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i 395 (627)
|+.||+|+++++.++.++++.+ ++|+||.|+++.++....+ .|.. ++|+++
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i---------------------------~pG~tE~ei~~~~~~~~~~-~G~~-~~~~~~ 51 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKAS---------------------------RPGMSEYELEAEFEYEFRS-RGAR-LAYSYI 51 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCcHHHHHHHHHHHHHH-cCCC-cCCCCe
Confidence 6799999999999998887664 7999999999999886643 4443 678999
Q ss_pred cccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 006890 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 396 ~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
+++|+|++.+|+.|++ ++|++||+|++|+|++|+||++|++|||++ |+|+++++++|+.+++++.+++++++| |+
T Consensus 52 v~~g~~~~~~H~~~~~---~~l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~ 127 (243)
T cd01087 52 VAAGSNAAILHYVHND---QPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GV 127 (243)
T ss_pred EEECCCccccCCCcCC---CcCCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CC
Confidence 9999999999999875 899999999999999999999999999999 699999999999999999999999998 99
Q ss_pred ccchHHHHHHHHHHHcC--------------------CCCcccccccccccCccccCCCcC-CCCCCCCcccCCcEEeeC
Q 006890 475 CGHTLDILARLPLWKYG--------------------LDYRHGTGHGVGSYLNVHEGPQSI-SFKPRNVPIHASMTATDE 533 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G--------------------~~~~h~~GHgvG~~l~vhE~P~~~-~~~~~~~~l~~Gmv~siE 533 (627)
++++|+.++++++++.| -.+.|++||||| +++||.|.+. ..+ ++.+|++||||++|
T Consensus 128 ~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~~~~~~~-~~~~l~~GMv~~iE 204 (243)
T cd01087 128 SYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGGYLRYLR-RARPLEPGMVITIE 204 (243)
T ss_pred cHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccC--cccccCccccccCC-CCCCCCCCCEEEEC
Confidence 99999999999987653 247899999999 9999999762 222 67899999999999
Q ss_pred ceeeecC----------ccEEEEeEeeEEecCCc
Q 006890 534 PGYYEDG----------NFGIRLENVLVVTDANT 557 (627)
Q Consensus 534 Pg~y~~~----------~~GvriEd~v~V~~~g~ 557 (627)
||+|.++ .+|+|+||+|+||++|+
T Consensus 205 p~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~~G~ 238 (243)
T cd01087 205 PGIYFIPDLLDVPEYFRGGGIRIEDDVLVTEDGP 238 (243)
T ss_pred CEEEeCCcccccccccceeEEEeeeEEEEcCCcc
Confidence 9999987 79999999999999997
|
E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro. |
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=354.63 Aligned_cols=236 Identities=18% Similarity=0.199 Sum_probs=206.2
Q ss_pred CccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHH
Q 006890 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (627)
Q Consensus 302 ~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~ 381 (627)
+.+...|.|||++||+.||+|++++..++..+++.+ ++|+||.||++.+..+.
T Consensus 129 ~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i---------------------------rpGvTe~EI~~~v~~~~ 181 (396)
T PLN03158 129 SDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI---------------------------KPGVTTDEIDRVVHEAT 181 (396)
T ss_pred cccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHH
Confidence 345678999999999999999999999999887764 79999999999998876
Q ss_pred HhhcCCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHH
Q 006890 382 ASKEHFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTA 457 (627)
Q Consensus 382 ~~~~g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~ 457 (627)
...+++. ...|+.++++|.|..++|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+++++++++|+.
T Consensus 182 ~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~---r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~ 258 (396)
T PLN03158 182 IAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDA---RKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKC 258 (396)
T ss_pred HHcCCccccccccCCCceeeecccccccCCCCCC---ccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHH
Confidence 4443332 23588889999999999999976 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCc
Q 006890 458 VLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEP 534 (627)
Q Consensus 458 v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEP 534 (627)
+++++.+++++++| |++.++|+.++++++.+.|+. +.|.+||||| +.+||.|.+..+.. ...+|+|||||+|||
T Consensus 259 ~~eal~~aI~~vkP-Gv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP 335 (396)
T PLN03158 259 TYECLEKAIAIVKP-GVRYREVGEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEP 335 (396)
T ss_pred HHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECC
Confidence 99999999999998 999999999999999999995 6788999999 99999998854321 236899999999999
Q ss_pred eeee-----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccc
Q 006890 535 GYYE-----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMI 582 (627)
Q Consensus 535 g~y~-----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i 582 (627)
++|. +|.+|+|+||||+||++|+ |.||. .|..+.++
T Consensus 336 ~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~------------EiLT~~~~~~~~~~ 389 (396)
T PLN03158 336 MINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGV------------EVLTARLPSSPDVF 389 (396)
T ss_pred eeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcc------------eECCCCCCCCcccc
Confidence 9984 3556889999999999998 88985 66655433
|
|
| >KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=328.74 Aligned_cols=238 Identities=27% Similarity=0.369 Sum_probs=207.1
Q ss_pred eEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHH
Q 006890 296 KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSD 375 (627)
Q Consensus 296 ~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~ 375 (627)
++..+...+.++|.||||.|++.||+|+.++++++.+.+.. .++...|..+.+
T Consensus 214 ~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~---------------------------sr~~~~E~~l~a 266 (488)
T KOG2414|consen 214 TVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFG---------------------------SRDFHNEAALSA 266 (488)
T ss_pred ccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhh---------------------------ccCCcchhhHhh
Confidence 47778899999999999999999999999999987655432 156789999999
Q ss_pred HHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-CCCCHHHHHH
Q 006890 376 KLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPSAHEKAC 454 (627)
Q Consensus 376 ~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G~p~~e~~~~ 454 (627)
.++... +..|+.-.+|+|+|+.|.|+..+||..++ ..++++|+||+|.|+.+.||++|+||||++ |+.|+.|+++
T Consensus 267 ~~eye~-r~rGad~~AYpPVVAgG~na~tIHY~~Nn---q~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~L 342 (488)
T KOG2414|consen 267 LLEYEC-RRRGADRLAYPPVVAGGKNANTIHYVRNN---QLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDL 342 (488)
T ss_pred hhhhhe-eecCccccccCCeeecCcccceEEEeecc---cccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHH
Confidence 998643 35688889999999999999999999876 899999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhccCC-CCcccchHHHHH----HHHHHHcCC-------------CCcccccccccccCccccCCCcCC
Q 006890 455 YTAVLKGHIALGNAVFP-NGTCGHTLDILA----RLPLWKYGL-------------DYRHGTGHGVGSYLNVHEGPQSIS 516 (627)
Q Consensus 455 y~~v~~~~~~~~~~~~p-~G~~~~~l~~~a----~~~l~~~G~-------------~~~h~~GHgvG~~l~vhE~P~~~~ 516 (627)
|++|+..|...+..++| .|++.++|+... .+.|.+.|. .++|++||=+| |+|||-|.+.
T Consensus 343 YeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLG--mDVHD~p~v~- 419 (488)
T KOG2414|consen 343 YEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLG--MDVHDCPTVS- 419 (488)
T ss_pred HHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcC--cccccCCCCC-
Confidence 99999999999999985 378889988644 445566665 37899999999 9999999873
Q ss_pred CCCCCCcccCCcEEeeCceeeecCc---------cEEEEeEeeEEecCCcccccCCcceeeeeccc-ccccccccc
Q 006890 517 FKPRNVPIHASMTATDEPGYYEDGN---------FGIRLENVLVVTDANTKFNFGDKGYLSFEHIT-WAPYQIKMI 582 (627)
Q Consensus 517 ~~~~~~~l~~Gmv~siEPg~y~~~~---------~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT-~~p~~~~~i 582 (627)
.+.+|+||||||||||+|.|.. -||||||.|+|+++|+ ++|| .+|.+.+.|
T Consensus 420 ---r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~edg~------------evLT~a~pKei~~i 480 (488)
T KOG2414|consen 420 ---RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGEDGP------------EVLTAACPKEIIEI 480 (488)
T ss_pred ---CCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccCCc------------eeehhcccCCHHHH
Confidence 5688999999999999998753 4999999999999997 8999 588876544
|
|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=327.66 Aligned_cols=212 Identities=19% Similarity=0.289 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCC------
Q 006890 316 LDGLKKAHIRDGAAIVQYI-IWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFR------ 388 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~------ 388 (627)
|+++|+|+.+++.+|..++ ..++..+++ ...+||.+++..++..+. ..+..
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~---------------------~~~~t~~~l~~~~e~~~~-~~~~~~~~~~~ 58 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQ---------------------EKKVTHSKLSDKVEKAIE-DKKKYKAKLDP 58 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------cccccHHHHHHHHHHHHh-CchhhhcCCCH
Confidence 4689999999999997554 456655543 234999999999998774 33322
Q ss_pred ---CCcCCcccccCCCc-ccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHH
Q 006890 389 ---GLSFPTISSVGPNA-AIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIA 464 (627)
Q Consensus 389 ---~~~f~~i~~~G~n~-a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~ 464 (627)
+++|+||++||+|+ +++|+.+++ +.+..|++|++|+|+.|+||++|+||||++| |+++|+++|+.+++++.+
T Consensus 59 ~~~~~~y~~iv~sG~~~~~l~h~~~s~---~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~ 134 (243)
T cd01091 59 EQLDWCYPPIIQSGGNYDLLKSSSSSD---KLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEE 134 (243)
T ss_pred HHcCcccCCeEeECcCcccCCCCCCCc---cccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHH
Confidence 68999999999999 899998875 8899999999999999999999999999998 899999999999999999
Q ss_pred HHhccCCCCcccchHHHHHHHHHHHcCC----CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceee-ec
Q 006890 465 LGNAVFPNGTCGHTLDILARLPLWKYGL----DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY-ED 539 (627)
Q Consensus 465 ~~~~~~p~G~~~~~l~~~a~~~l~~~G~----~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y-~~ 539 (627)
++++++| |+++++|+.++++++.+.|. .|.|++||||| |++||.|.++..+ ++.+|++||||++|||+| .+
T Consensus 135 ~i~~lkp-G~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~~~-~~~~L~~GMvf~vepGi~~~~ 210 (243)
T cd01091 135 ILKELKP-GAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIG--LEFRESSLIINAK-NDRKLKKGMVFNLSIGFSNLQ 210 (243)
T ss_pred HHHHcCC-CCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccC--cccccCccccCCC-CCCCcCCCCEEEEeCCccccc
Confidence 9999998 99999999999999999874 57899999999 9999998766554 678999999999999999 43
Q ss_pred ---------CccEEEEeEeeEEecCCc
Q 006890 540 ---------GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 540 ---------~~~GvriEd~v~V~~~g~ 557 (627)
+.||+||||||+||++|+
T Consensus 211 ~~~~~~~~~~~~gv~ieDtV~Vt~~G~ 237 (243)
T cd01091 211 NPEPKDKESKTYALLLSDTILVTEDEP 237 (243)
T ss_pred CccccCccCCeeEEEEEEEEEEcCCCC
Confidence 378999999999999997
|
|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=319.96 Aligned_cols=206 Identities=35% Similarity=0.480 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcc
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTI 395 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i 395 (627)
|++||+|+++++.++..+.+.+ ++|+||.|+++.+..... ..|..+.+|+++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~---------------------------~~G~te~ei~~~~~~~~~-~~g~~~~~~~~~ 52 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFI---------------------------KPGMTEREVAAELEYFMR-KLGAEGPSFDTI 52 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCCHHHHHHHHHHHHH-HcCCCCCCCCcE
Confidence 6799999999999998776543 789999999999988764 456667899999
Q ss_pred cccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 006890 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTC 475 (627)
Q Consensus 396 ~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~ 475 (627)
+++|+|+..+|+.|++ ++|++||++.+|+|++|+||++|++||+++|+|+++++++|+.+++++.+++++++| |++
T Consensus 53 v~~g~~~~~~h~~~~~---~~l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~ 128 (208)
T cd01092 53 VASGPNSALPHGVPSD---RKIEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVT 128 (208)
T ss_pred EEECccccccCCCCCC---cCcCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCc
Confidence 9999999999999875 899999999999999999999999999999999999999999999999999999997 999
Q ss_pred cchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 476 GHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 476 ~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+++|+.++++.+++.|+ +|.|++||||| +.+||.|.+ ..+ ++.+|++||||++||++|.++.+|+|+||+|+||
T Consensus 129 ~~di~~~~~~~~~~~g~~~~~~~~~Gh~iG--~~~~e~p~i-~~~-~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 129 AKEVDKAARDVIEEAGYGEYFIHRTGHGVG--LEVHEAPYI-SPG-SDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred HHHHHHHHHHHHHHcCccccCCCCCccccC--cccCcCCCc-CCC-CCCCcCCCCEEEECCeEEecCCCEEEeeeEEEEC
Confidence 99999999999999998 68999999999 999999985 333 6889999999999999999999999999999999
Q ss_pred cCCc
Q 006890 554 DANT 557 (627)
Q Consensus 554 ~~g~ 557 (627)
++|+
T Consensus 205 ~~g~ 208 (208)
T cd01092 205 EDGC 208 (208)
T ss_pred CCCC
Confidence 9984
|
The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline. |
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=320.93 Aligned_cols=208 Identities=21% Similarity=0.249 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCC-----CC
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFR-----GL 390 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~-----~~ 390 (627)
|+.||+|++++..++..+++.+ ++|+||.|+++.+...... .|.. ..
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~---------------------------~pG~tE~ev~~~~~~~~~~-~G~~~~~~~~~ 52 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAI---------------------------KPGVTTKELDQIAHEFIEE-HGAYPAPLGYY 52 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHHH-cCCCcccccCC
Confidence 6899999999999998877654 7999999999999876643 3332 23
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccC
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~ 470 (627)
+|++.+++|.|++.+|+.|++ ++|++||++++|+|+.|.||++|++|||++|+|+++++++|+.+++++.+++++++
T Consensus 53 ~~~~~~~~~~~~~~~h~~~~~---~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (238)
T cd01086 53 GFPKSICTSVNEVVCHGIPDD---RVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVK 129 (238)
T ss_pred CCCcceecCCCCceeCCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 566778899999999999875 89999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCC-CC-CCCcccCCcEEeeCceeee---------
Q 006890 471 PNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISF-KP-RNVPIHASMTATDEPGYYE--------- 538 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~-~~-~~~~l~~Gmv~siEPg~y~--------- 538 (627)
| |+++++|+.++++++.+.|+. +.|.+||||| +.+||.|.+... .+ ++.+|++||||++||++|.
T Consensus 130 p-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~ 206 (238)
T cd01086 130 P-GNRIGDIGHAIEKYAEKNGYSVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLP 206 (238)
T ss_pred C-CCCHHHHHHHHHHHHHHcCcceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECC
Confidence 8 999999999999999999994 5788999999 999999987521 12 6789999999999999996
Q ss_pred --------cCccEEEEeEeeEEecCCc
Q 006890 539 --------DGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 539 --------~~~~GvriEd~v~V~~~g~ 557 (627)
+|.+|+|+||+|+||++|+
T Consensus 207 ~~~~~~~~~g~~g~~~edtv~Vte~G~ 233 (238)
T cd01086 207 DGWTVVTKDGSLSAQFEHTVLITEDGP 233 (238)
T ss_pred CCCEEEcCCCCEEEeeeeEEEEcCCcc
Confidence 5778999999999999998
|
E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. |
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=305.65 Aligned_cols=203 Identities=31% Similarity=0.484 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCccc
Q 006890 317 DGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTIS 396 (627)
Q Consensus 317 ~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~ 396 (627)
|+||+|+++++.++.++++.+ ++|+||.||++.+.+.+....|..+.+|++++
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~---------------------------~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~ 53 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEAL---------------------------RPGMTEYEIAAAIERAMLRRHGGEEPAFPPIV 53 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------------------------STTCBHHHHHHHHHHHHHHHTTTTEESSESEE
T ss_pred CHHHHHHHHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHHHcCCCcccCCceE
Confidence 689999999999999998876 78999999999999873345566778999999
Q ss_pred ccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 006890 397 SVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCG 476 (627)
Q Consensus 397 ~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~ 476 (627)
++|+|+.++|+.|++ ++|++||+|.+|+|++|.||++|++||+++| |+++|+++|+.+++++.+++++++| |+++
T Consensus 54 ~~g~~~~~~~~~~~~---~~l~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~ 128 (207)
T PF00557_consen 54 GSGPNTDLPHYTPTD---RRLQEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTG 128 (207)
T ss_dssp EECCCCGETTTBCCS---SBESTTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBH
T ss_pred ecCCcceecceeccc---eeeecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-cccc
Confidence 999999999998864 8999999999999999999999999999999 9999999999999999999999998 9999
Q ss_pred chHHHHHHHHHHHcCC--CCcccccccccccCccccC-CCcCCCCCCCCcccCCcEEeeCceee-ecCccEEEEeEeeEE
Q 006890 477 HTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEG-PQSISFKPRNVPIHASMTATDEPGYY-EDGNFGIRLENVLVV 552 (627)
Q Consensus 477 ~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~-P~~~~~~~~~~~l~~Gmv~siEPg~y-~~~~~GvriEd~v~V 552 (627)
++|+.++++.+.+.|+ .+.|.+||||| +.+||. |.+...+ ++.+|++||||++||+++ .++.+|+++||+|+|
T Consensus 129 ~~v~~~~~~~~~~~g~~~~~~~~~GH~iG--~~~~~~~P~i~~~~-~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 129 SDVYEAVREVLEEYGLEEPYPHGLGHGIG--LEFHEPGPNIARPG-DDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp HHHHHHHHHHHHHTTEGEEBTSSSEEEES--SSSSEEEEEESSTT-TSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred chhhHHHHHHHHhhcccceeeeccccccc--ccccccceeeeccc-ccceecCCCceeEeeeEEccCCCcEEEEEEEEEE
Confidence 9999999999999998 68999999999 999997 9974233 789999999999999999 678899999999999
Q ss_pred ec
Q 006890 553 TD 554 (627)
Q Consensus 553 ~~ 554 (627)
|+
T Consensus 206 te 207 (207)
T PF00557_consen 206 TE 207 (207)
T ss_dssp ES
T ss_pred Cc
Confidence 96
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A .... |
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=291.43 Aligned_cols=205 Identities=31% Similarity=0.448 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcc
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTI 395 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i 395 (627)
|+.||+|+++++.++..++..+ +||+||.|+++.+..... ..|. +.+|+++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~---------------------------~~G~te~ei~~~~~~~~~-~~g~-~~~~~~~ 51 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAI---------------------------RPGVTEAEVAAAIEQALR-AAGG-YPAGPTI 51 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcE
Confidence 5789999999999998887654 799999999999998764 3444 6788999
Q ss_pred cccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 006890 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTC 475 (627)
Q Consensus 396 ~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~ 475 (627)
+++|+|+..+|+.|++ +++++||++++|+|++|.||++|++||+++|+|+++++++|+.+.+++.+++++++| |++
T Consensus 52 v~~g~~~~~~h~~~~~---~~i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~ 127 (207)
T cd01066 52 VGSGARTALPHYRPDD---RRLQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVT 127 (207)
T ss_pred EEECccccCcCCCCCC---CCcCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 9999999999999875 899999999999999999999999999999999999999999999999999999998 999
Q ss_pred cchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 476 GHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 476 ~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+.+|+.++++.+.+.|+ ++.|++||||| +.+||.|.+ ... ++.+|++||||++||++|.++.+|+|+||+|+||
T Consensus 128 ~~ei~~~~~~~~~~~g~~~~~~~~~Gh~iG--~~~~e~~~~-~~~-~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt 203 (207)
T cd01066 128 AEEVDAAAREVLEEHGLGPNFGHRTGHGIG--LEIHEPPVL-KAG-DDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVT 203 (207)
T ss_pred HHHHHHHHHHHHHHcCccccCCCCCccccC--cccCCCCCc-CCC-CCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEe
Confidence 99999999999999998 58899999999 999999984 333 6789999999999999999988999999999999
Q ss_pred cCCc
Q 006890 554 DANT 557 (627)
Q Consensus 554 ~~g~ 557 (627)
++|+
T Consensus 204 ~~g~ 207 (207)
T cd01066 204 EDGP 207 (207)
T ss_pred CCCC
Confidence 9874
|
Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation. |
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=292.18 Aligned_cols=207 Identities=15% Similarity=0.166 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh---------hcC
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS---------KEH 386 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~---------~~g 386 (627)
++.||+|+++++.++..+++++ ++|+||.|++..++.+... ..+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i---------------------------~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g 53 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLC---------------------------VPGAKVVDLCEKGDKLILEELGKVYKKEKKL 53 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHHHhhcccccCcccc
Confidence 3689999999999999887765 7899999998776654432 145
Q ss_pred CCCCcCCcccccCCCcccccccCCC-CccCCCCCCCeEEEeecceecCcccceEEEEecCCCCH-----HHHHHHHHHHH
Q 006890 387 FRGLSFPTISSVGPNAAIMHYSPQS-ETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSA-----HEKACYTAVLK 460 (627)
Q Consensus 387 ~~~~~f~~i~~~G~n~a~~h~~~~~-~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~-----e~~~~y~~v~~ 460 (627)
..+.+|+++++ .|++.+||.|.. .++++|++||+|++|+|+.|+||++|+||||++|+|++ +++++|+.+++
T Consensus 54 ~~g~~~~~~v~--~n~~~~H~~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~e 131 (228)
T cd01089 54 EKGIAFPTCIS--VNNCVCHFSPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHY 131 (228)
T ss_pred cCCCCcCeEec--cCceeecCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHH
Confidence 66789988887 488899999853 24589999999999999999999999999999999885 89999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeec
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYED 539 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~ 539 (627)
++.+++++++| |+++++|+.++++.+.+.|+. +...+||++|+++..|+++.. -..+|++||||++||++|.+
T Consensus 132 a~~~~~~~~kp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~~-----~~~~l~~gmvf~~ep~~~~~ 205 (228)
T cd01089 132 ALEAALRLLRP-GNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKAK-----LVECVKHGLLFPYPVLYEKE 205 (228)
T ss_pred HHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCcc-----chhhccCCcccccceeEccC
Confidence 99999999998 999999999999999999961 222334444434556766542 25679999999999999999
Q ss_pred CccEEEEeEeeEEecCCc
Q 006890 540 GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 540 ~~~GvriEd~v~V~~~g~ 557 (627)
|.+|+|+||||+||++|+
T Consensus 206 g~~~~~~~~Tv~vt~~G~ 223 (228)
T cd01089 206 GEVVAQFKLTVLLTPNGV 223 (228)
T ss_pred CCeEEEEEEEEEEcCCCC
Confidence 999999999999999998
|
Family members have been implicated in cell cycle control. |
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=253.13 Aligned_cols=222 Identities=24% Similarity=0.323 Sum_probs=189.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh-----
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS----- 383 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~----- 383 (627)
.+|+++||+.||+|+++...++..+...+ +||+|-.||....+++...
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v---------------------------~pGvtt~Eld~~~~~~i~~~ga~p 56 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLV---------------------------KPGVTTLELDEIAEEFIREKGAYP 56 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------CCCCCHHHHHHHHHHHHHHcCcee
Confidence 38999999999999999999988776643 7999999999999997753
Q ss_pred -hcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCC-HHHHHHHHHHHHH
Q 006890 384 -KEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPS-AHEKACYTAVLKG 461 (627)
Q Consensus 384 -~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~-~e~~~~y~~v~~~ 461 (627)
..|+.+..|+ ++..-|-..+||.|+ .+++|++||+|.||+|+.++||.+|.++||.+|+.+ +..+++.+++.++
T Consensus 57 a~~gy~g~~~~--~ciSvNe~v~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~ea 132 (255)
T COG0024 57 AFLGYKGFPFP--TCISVNEVVAHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEA 132 (255)
T ss_pred hhccCcCCCcc--eEeehhheeeecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHH
Confidence 2445554443 455578888999998 458999999999999999999999999999999766 4677799999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~ 538 (627)
..+++++++| |++..+|-.+..++....|+. ....+||||| ..+||.|++..+.. ...+|+|||||+|||.+..
T Consensus 133 l~~~I~~vkp-G~~l~~Ig~aIq~~~~~~G~~vVr~~~GHgig--~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~ 209 (255)
T COG0024 133 LYAGIEAVKP-GARLGDIGRAIQEYAESRGFSVVRNLTGHGIG--RELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINT 209 (255)
T ss_pred HHHHHHhccC-CCCHHHHHHHHHHHHHHcCCEEeecccCCccC--cccCCCCeeccccCCCCCcccCCCCEEEEeeEEEc
Confidence 9999999998 999999999999999999983 5667999999 79999999987543 2468999999999998753
Q ss_pred ------------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccc
Q 006890 539 ------------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAP 576 (627)
Q Consensus 539 ------------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p 576 (627)
++....+.|.||+||++|+ +.||..|
T Consensus 210 G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~~g~------------eilT~~~ 253 (255)
T COG0024 210 GSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTEDGC------------EILTLRP 253 (255)
T ss_pred CCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeCCCc------------EEeeCCC
Confidence 2346688999999999998 8888654
|
|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=267.20 Aligned_cols=198 Identities=17% Similarity=0.133 Sum_probs=169.5
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh---
Q 006890 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK--- 384 (627)
Q Consensus 308 r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~--- 384 (627)
-.+|||+||+.||+|++++..++..+.+++ +||+|+.||+...+++....
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~i---------------------------kpG~t~~el~~~~~~~i~~~~a~ 63 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEAC---------------------------SPGAKVVDICEKGDAFIMEETAK 63 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------CCCCCHHHHHHHHHHHHHHhhhh
Confidence 468999999999999999999998887764 79999999999877655321
Q ss_pred ------cCCCCCcCCcccccCCCcccccccCCCC-ccCCCCCCCeEEEeecceecCcccceEEEEecCC-----CCHHHH
Q 006890 385 ------EHFRGLSFPTISSVGPNAAIMHYSPQSE-TCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGK-----PSAHEK 452 (627)
Q Consensus 385 ------~g~~~~~f~~i~~~G~n~a~~h~~~~~~-~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~-----p~~e~~ 452 (627)
.+..+++|+++++ .|...+||.|... +++.|++||+|.||+|++|+||++|++|||++|+ ++++++
T Consensus 64 ~~~~~~~~~~g~afpt~vS--vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~ 141 (389)
T TIGR00495 64 IFKKEKEMEKGIAFPTCIS--VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKA 141 (389)
T ss_pred hhcccccccCCCCCCeEEe--cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHH
Confidence 2356789998887 7888999999543 2488999999999999999999999999999995 467899
Q ss_pred HHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCcccc-CCCcCC-CCC------CCCc
Q 006890 453 ACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHE-GPQSIS-FKP------RNVP 523 (627)
Q Consensus 453 ~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE-~P~~~~-~~~------~~~~ 523 (627)
+++.++.+|+.+++++++| |++.++|+.++++++.++|+ .+.+.+||||| -.+|| .|.++. +.. ....
T Consensus 142 ~l~~aa~~A~~aai~~vkP-G~~~~dI~~ai~~v~~~~G~~~v~~~~gH~ig--r~~~~g~~~Ii~~~~~~~~~~~~~~~ 218 (389)
T TIGR00495 142 DVIAAAHLAAEAALRLVKP-GNTNTQVTEAINKVAHSYGCTPVEGMLSHQLK--QHVIDGEKVIISNPSDSQKKDHDTAE 218 (389)
T ss_pred HHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCeecCCceeeccc--ceeccCCCeeeecCCccccCCCCCCE
Confidence 9999999999999999997 99999999999999999999 46788999999 77888 776532 211 2467
Q ss_pred ccCCcEEeeCceee
Q 006890 524 IHASMTATDEPGYY 537 (627)
Q Consensus 524 l~~Gmv~siEPg~y 537 (627)
|++|||++|||.+.
T Consensus 219 le~gev~aIEp~vs 232 (389)
T TIGR00495 219 FEENEVYAVDILVS 232 (389)
T ss_pred ecCCCEEEEeeeec
Confidence 99999999999764
|
Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. |
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=268.98 Aligned_cols=200 Identities=15% Similarity=0.112 Sum_probs=169.4
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh---
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS--- 383 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~--- 383 (627)
-+..+|++||+.||+|+.++..++..+..++ +||+||.||+..++.....
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~I---------------------------kpG~se~EIa~~ie~~ir~~~~ 201 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVI---------------------------KPGVKLIDICERIESKSRELIE 201 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------hCCCCHHHHHHHHHHHHHHHHH
Confidence 3344799999999999999999988877665 7899999999998875422
Q ss_pred hcCC-CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHH
Q 006890 384 KEHF-RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462 (627)
Q Consensus 384 ~~g~-~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~ 462 (627)
..|. .+.+|++++ +.|.+.+||.|+.+++++|+.||+|.||+|++|+||++|++|||++| +++++++.++.+|+
T Consensus 202 ~~G~~~g~aFPt~v--S~N~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~ 276 (470)
T PTZ00053 202 ADGLKCGWAFPTGC--SLNHCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDAT 276 (470)
T ss_pred hcCCcccCCCCcee--ecCccccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHH
Confidence 2243 478999865 47888899999754558999999999999999999999999999997 68899999999999
Q ss_pred HHHHhccCCCCcccchHHHHHHHHHHHcCCC----------CcccccccccccC-ccccCCCcCCCCC-CCCcccCCcEE
Q 006890 463 IALGNAVFPNGTCGHTLDILARLPLWKYGLD----------YRHGTGHGVGSYL-NVHEGPQSISFKP-RNVPIHASMTA 530 (627)
Q Consensus 463 ~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----------~~h~~GHgvG~~l-~vhE~P~~~~~~~-~~~~l~~Gmv~ 530 (627)
.+++++++| |+++++|+.++++++.++|+. +.|.+||||| + .+|++|.+....+ +..+|++||||
T Consensus 277 ~aaI~~~kp-Gv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG--~y~iHe~k~iP~v~~~~~~~LeeGmVf 353 (470)
T PTZ00053 277 NTGIKEAGI-DVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIG--PYIIHGGKSVPIVKGGENTRMEEGELF 353 (470)
T ss_pred HHHHHHhcC-CCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCC--CccccCCCcCCeeCCCCCCEecCCCEE
Confidence 999999997 999999999999999999962 3799999999 6 8999665543222 56899999999
Q ss_pred eeCceeeecCcc
Q 006890 531 TDEPGYYEDGNF 542 (627)
Q Consensus 531 siEPg~y~~~~~ 542 (627)
+|||.+. .|.+
T Consensus 354 aIEPf~s-tG~G 364 (470)
T PTZ00053 354 AIETFAS-TGRG 364 (470)
T ss_pred EEcceee-CCCC
Confidence 9999875 4444
|
|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=259.29 Aligned_cols=194 Identities=20% Similarity=0.208 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCc
Q 006890 315 ELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPT 394 (627)
Q Consensus 315 Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~ 394 (627)
+|+.||+|++++..++..+++.+ ++|+||.|+++.++..... .| .+++|++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i---------------------------~pG~se~ei~~~~~~~i~~-~g-~~~afp~ 51 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLI---------------------------KPGAKLLDVAEFVENRIRE-LG-AKPAFPC 51 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHHH-cC-CccCCCC
Confidence 58999999999999998877653 7899999999999987743 34 3689999
Q ss_pred ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 006890 395 ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 395 i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
++++|++ .+||.|...+++.|++||+|.+|+|++|+||++|++||+++| ++++++|+++.+|+.+++++++| |+
T Consensus 52 ~vs~n~~--~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~ 125 (291)
T PRK08671 52 NISINEV--AAHYTPSPGDERVFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GV 125 (291)
T ss_pred EEeeCCC--ccCCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 8887665 479999755568999999999999999999999999999999 47889999999999999999998 99
Q ss_pred ccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCCC-CCCcccCCcEEeeCceeeecCccEEE
Q 006890 475 CGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIR 545 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~Gmv~siEPg~y~~~~~Gvr 545 (627)
++++|+.++++.+.++|+ .+.|.+|||||.| .+||+|.+....+ ++.+|+|||||++||++. .|.+.++
T Consensus 126 ~~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~~-~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t-~G~G~v~ 196 (291)
T PRK08671 126 SVGEIGRVIEETIRSYGFKPIRNLTGHGLERY-ELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT-DGEGKVV 196 (291)
T ss_pred CHHHHHHHHHHHHHHcCCcccCCCcccCcCCC-cccCCCccCccCCCCCceeCCCCEEEEcceEE-CCCCeEe
Confidence 999999999999999999 5678999999943 7899998643322 578999999999999754 6666554
|
|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=258.23 Aligned_cols=198 Identities=15% Similarity=0.120 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcC
Q 006890 313 PVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSF 392 (627)
Q Consensus 313 ~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f 392 (627)
-+||+.||+|+++++.++..+.+++ ++|+||.|+++.++..... .|. .++|
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i---------------------------~~G~se~el~~~~e~~~~~-~g~-~~aF 52 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRI---------------------------VPGVKLLEVAEFVENRIRE-LGA-EPAF 52 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCCHHHHHHHHHHHHHH-cCC-CCCC
Confidence 3789999999999999998887764 7999999999999987743 343 3789
Q ss_pred CcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCC
Q 006890 393 PTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPN 472 (627)
Q Consensus 393 ~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~ 472 (627)
+++++. |...+||.|...+++.|++||+|++|+|++|+||++|++||+++|+ .++++|+++.+|+.+++++++|
T Consensus 53 p~~vs~--n~~~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kP- 126 (295)
T TIGR00501 53 PCNISI--NECAAHFTPKAGDKTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRA- 126 (295)
T ss_pred Ccceec--CCEeeCCCCCCCcCccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcC-
Confidence 998774 6667899997655688999999999999999999999999999995 3689999999999999999998
Q ss_pred CcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCCC-CCCcccCCcEEeeCceeeecCccEEEEe
Q 006890 473 GTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLE 547 (627)
Q Consensus 473 G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~Gmv~siEPg~y~~~~~GvriE 547 (627)
|+++++|+.++++.+.++|+ .+.|.+|||+|.| .+|++|.+....+ ++.+|++||||++||+ +..|.+.++-+
T Consensus 127 Gv~~~dV~~ai~~vi~~~G~~~i~~~~GHgig~~-~~h~g~~ip~i~~~~~~~le~GmV~aIEP~-~~~G~G~v~~~ 201 (295)
T TIGR00501 127 GVRVGEIGKAIQEVIESYGVKPISNLTGHSMAPY-RLHGGKSIPNVKERDTTKLEEGDVVAIEPF-ATDGVGYVTDG 201 (295)
T ss_pred CCCHHHHHHHHHHHHHHcCCeeecCCCCcceecc-cccCCCccCeecCCCCCEeCCCCEEEEcee-EECCcCeEecC
Confidence 99999999999999999999 5789999999964 6788865422221 5688999999999995 56776655443
|
Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation. |
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=250.31 Aligned_cols=195 Identities=17% Similarity=0.138 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcc
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTI 395 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i 395 (627)
++.||+|++++..++.++++.+ ++|+||.|+++.+++.... .| .+++|+++
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i---------------------------~pG~te~ei~~~~~~~i~~-~G-~~~afp~~ 51 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLI---------------------------KPGMTLLEIAEFVENRIRE-LG-AGPAFPVN 51 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHH-cC-CCCCCCce
Confidence 3689999999999998887654 7999999999999987643 34 36789876
Q ss_pred cccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 006890 396 SSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTC 475 (627)
Q Consensus 396 ~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~ 475 (627)
+ +.|...+||.|+..+++.|++||+|.+|+|++|+||++|++||+++|+ +++++|+++++|+.+++++++| |++
T Consensus 52 i--s~n~~~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~ 125 (291)
T cd01088 52 L--SINECAAHYTPNAGDDTVLKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVR 125 (291)
T ss_pred e--ccCCEeeCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 4 467778999998656689999999999999999999999999999984 7889999999999999999998 999
Q ss_pred cchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCCC-CCCcccCCcEEeeCceeeecCccEEEEe
Q 006890 476 GHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLE 547 (627)
Q Consensus 476 ~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~Gmv~siEPg~y~~~~~GvriE 547 (627)
+++|+.++++.+.++|+ .+.|.+|||||.| .+|++|.+..... ++.+|+|||||++||. +..|.+.++.+
T Consensus 126 ~~dV~~ai~~~i~~~G~~~~~~~~GHgig~~-~~h~~~~ip~~~~~~~~~le~gmV~aIEp~-~s~G~G~v~~~ 197 (291)
T cd01088 126 LGEIGEAIEEVIESYGFKPIRNLTGHSIERY-RLHAGKSIPNVKGGEGTRLEEGDVYAIEPF-ATTGKGYVHDG 197 (291)
T ss_pred HHHHHHHHHHHHHHcCCEEeecCCccCccCc-cccCCCccCccCCCCCCEeCCCCEEEEcee-EECCCCeeecC
Confidence 99999999999999999 5789999999942 6899876533221 5688999999999995 46777777643
|
E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. |
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=228.42 Aligned_cols=223 Identities=20% Similarity=0.201 Sum_probs=194.5
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCC
Q 006890 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHF 387 (627)
Q Consensus 308 r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~ 387 (627)
-.|.++++|++||.|++++...+..+... ++||+|..||...+.+.....+.+
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~---------------------------v~PgvTTdEiD~~VH~a~Ierg~Y 166 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATL---------------------------VRPGVTTDEIDRAVHNAIIERGAY 166 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhh---------------------------cCCCccHHHHHHHHHHHHHhcCCc
Confidence 45789999999999999999888765444 489999999999998866544444
Q ss_pred C----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHH
Q 006890 388 R----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 388 ~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~ 463 (627)
. ...|+-.+++.-|..++|+.|.. |+|+.||++.||....++||+.|..+||++|+.+++.+++-+...++.+
T Consensus 167 PSPLnYy~FPKS~CTSVNEviCHGIPD~---RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~ 243 (369)
T KOG2738|consen 167 PSPLNYYGFPKSVCTSVNEVICHGIPDS---RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLE 243 (369)
T ss_pred CCCcccCCCchhhhcchhheeecCCCCc---CcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHH
Confidence 2 24788889999999999999986 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee--
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE-- 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~-- 538 (627)
.+++.++| |+...+|-.+..+...+.|+. ....+||||| --+|-.|.+..+.. ...++++||+|||||.+..
T Consensus 244 kaI~~~kp-Gv~freiG~iI~kha~~~g~sVVr~ycGHGig--~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~ 320 (369)
T KOG2738|consen 244 KAIAIVKP-GVSFREIGNIIQKHATKNGYSVVRSYCGHGIG--RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGT 320 (369)
T ss_pred HHHHHhCC-chhHHHHHHHHHHHhhhcCceeehhhhccccc--cccccCCCchhhcccCCcceeecCceEEeeeeecccc
Confidence 99999998 999999999999999999996 5677999999 66799998866643 2467999999999998864
Q ss_pred ---------------cCccEEEEeEeeEEecCCcccccCCcceeeeeccccc
Q 006890 539 ---------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWA 575 (627)
Q Consensus 539 ---------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~ 575 (627)
+|......|.|++||+.|+ |.||..
T Consensus 321 ~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~------------EILT~r 360 (369)
T KOG2738|consen 321 WEDITWPDDWTAVTADGKRSAQFEHTLLVTETGC------------EILTKR 360 (369)
T ss_pred cccccCCCCceEEecCCceecceeeEEEEecccc------------eehhcc
Confidence 3566789999999999998 788854
|
|
| >KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-24 Score=227.99 Aligned_cols=260 Identities=20% Similarity=0.263 Sum_probs=215.5
Q ss_pred eEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHH
Q 006890 296 KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYI-IWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVS 374 (627)
Q Consensus 296 ~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~ 374 (627)
..+|++-.+..+-++|++.||+.+|.|+..+...|.+++ ..+..++++ ...+|...+.
T Consensus 123 n~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~---------------------ekkvthskLs 181 (960)
T KOG1189|consen 123 NKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDE---------------------EKKVTHSKLS 181 (960)
T ss_pred ceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------cchhhhHHHH
Confidence 578888889999999999999999999999999998654 344555554 4567888888
Q ss_pred HHHHHHHHhh-------cCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCC
Q 006890 375 DKLESFRASK-------EHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKP 447 (627)
Q Consensus 375 ~~l~~~~~~~-------~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p 447 (627)
..++.+.... +.....+|+||++||.+..+-....++ +..| + ++++.+|++|++||++++||+.+ .|
T Consensus 182 D~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s~--~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dp 255 (960)
T KOG1189|consen 182 DLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVSD--DNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DP 255 (960)
T ss_pred HHHHHHhhccccCcccCccccccccChhhhcCCccccccccccc--cccc--c-eEEeeccchhhhhhccccceeee-cc
Confidence 8877655321 112457999999999998763333332 3566 3 99999999999999999999999 49
Q ss_pred CHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC----CCcccccccccccCccccCCCcCCCCCCCCc
Q 006890 448 SAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL----DYRHGTGHGVGSYLNVHEGPQSISFKPRNVP 523 (627)
Q Consensus 448 ~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~----~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~ 523 (627)
+.+|.+.|+.++.+|.+++..++| |+..++||..+-.++.+.+. ++....|.||| |+..|.-.+++.+ ++.+
T Consensus 256 ssemq~nY~fLl~aqe~il~~lrp-G~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iG--lEFREssl~inaK-nd~~ 331 (960)
T KOG1189|consen 256 SSEMQENYEFLLAAQEEILKLLRP-GTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIG--LEFRESSLVINAK-NDRV 331 (960)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcC-CCchhHHHHHHHHHHHhcCcchhhhhhhhcccccc--eeeeccccccccc-chhh
Confidence 999999999999999999999998 99999999999999999987 57788999999 9999999988876 8899
Q ss_pred ccCCcEEeeCceeee------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccccccCCCHHHHHHHHH
Q 006890 524 IHASMTATDEPGYYE------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNA 597 (627)
Q Consensus 524 l~~Gmv~siEPg~y~------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~~~l~~~e~~~ln~ 597 (627)
|++||||.|.-|+-. .+.|.+-|.|||+|+++++. +.||.++...+-+.+..-.++|=+=++.
T Consensus 332 lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~p~-----------~vLT~~~K~~~dv~~~f~~eeeE~~~~~ 400 (960)
T KOG1189|consen 332 LKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDPPA-----------EVLTDSAKAVKDVSYFFKDEEEEEELEK 400 (960)
T ss_pred hccCcEEEEeeccccccCcccccchhhhccceeeecCCCcc-----------hhhcccchhhcccceeeccchhhhhhhh
Confidence 999999999988863 24689999999999999973 8899988888888887776555444443
|
|
| >COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-19 Score=185.36 Aligned_cols=232 Identities=15% Similarity=0.160 Sum_probs=183.3
Q ss_pred eEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHH
Q 006890 296 KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSD 375 (627)
Q Consensus 296 ~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~ 375 (627)
..+|++.-+..|-.+|+..||+.+|.+.+.++..|.-+...++..++. .-.+|...+..
T Consensus 156 N~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~---------------------~~kit~~KlsD 214 (1001)
T COG5406 156 NASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDG---------------------AFKITHGKLSD 214 (1001)
T ss_pred chhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhh---------------------hhhhccchHHH
Confidence 567888889999999999999999999999998888666666555543 23456666666
Q ss_pred HHHHHH------Hhh---c-----CCCCCcCCcccccCCCccc-ccccCCCCccCCCCCCCeEEEeecceecCcccceEE
Q 006890 376 KLESFR------ASK---E-----HFRGLSFPTISSVGPNAAI-MHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITR 440 (627)
Q Consensus 376 ~l~~~~------~~~---~-----g~~~~~f~~i~~~G~n~a~-~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tR 440 (627)
.++... ... - .-..++|.||++||....+ |..... +..+ .||+|++.+|.+|++||++++|
T Consensus 215 ~mes~iddv~f~q~~s~~l~~~~~d~lew~ytpiiqsg~~~Dl~psa~s~---~~~l-~gd~vl~s~GiRYn~YCSn~~R 290 (1001)
T COG5406 215 LMESLIDDVEFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSIDLTPSAFSF---PMEL-TGDVVLLSIGIRYNGYCSNMSR 290 (1001)
T ss_pred HhhhhcchhhhhhhcCccccccchhhhhhhcchhhccCceeecccccccC---chhh-cCceEEEEeeeeeccccccccc
Confidence 665421 110 0 1135789999999987654 222222 2555 5679999999999999999999
Q ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC----CCcccccccccccCccccCCCcCC
Q 006890 441 TFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL----DYRHGTGHGVGSYLNVHEGPQSIS 516 (627)
Q Consensus 441 T~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~----~~~h~~GHgvG~~l~vhE~P~~~~ 516 (627)
|+.+. |+.||.+.|..++.+|..+...++| |+...+|+..+..++.+.|. +|...+|-+|| ++.++.-.+..
T Consensus 291 T~l~d-p~~e~~~Ny~fl~~lQk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~n 366 (1001)
T COG5406 291 TILTD-PDSEQQKNYEFLYMLQKYILGLVRP-GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFN 366 (1001)
T ss_pred eEEeC-CchHhhhhHHHHHHHHHHHHhhcCC-CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--cccccccccee
Confidence 99995 9999999999999999999999997 99999999999999999887 57788999999 99888666555
Q ss_pred CCCCCCcccCCcEEeeCceeee------cCccEEEEeEeeEEecCCc
Q 006890 517 FKPRNVPIHASMTATDEPGYYE------DGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 517 ~~~~~~~l~~Gmv~siEPg~y~------~~~~GvriEd~v~V~~~g~ 557 (627)
.. ++++|++||+|.+.-|+-. ...|...+-||+-|+-+.+
T Consensus 367 vk-n~r~lq~g~~fnis~gf~nl~~~~~~Nnyal~l~dt~qi~ls~p 412 (1001)
T COG5406 367 VK-NGRVLQAGCIFNISLGFGNLINPHPKNNYALLLIDTEQISLSNP 412 (1001)
T ss_pred cc-CCceeccccEEEEeecccccCCCCcccchhhhhccceEeecCCc
Confidence 44 7799999999999988753 2468888888888877664
|
|
| >PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3 | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.2e-16 Score=140.98 Aligned_cols=126 Identities=24% Similarity=0.365 Sum_probs=104.1
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccccccccc---ccCceEEE-EeCCceEEEEc-chhHHHHhccc
Q 006890 4 ILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGF---TGSAGLAL-ITMNEALLWTD-GRYFLQATQEL 78 (627)
Q Consensus 4 Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGF---tgs~g~~v-vt~~~a~l~tD-~RY~~qA~~~~ 78 (627)
|+++||+.|+++| +|++||+++ .|++||||| +++.++++ |+.++++||+| ++|..+++...
T Consensus 1 Rl~rl~~~m~~~g--id~lll~~~------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~ 66 (132)
T PF01321_consen 1 RLERLRAAMAEAG--IDALLLTSP------------ENIRYLTGFRWQPGERPVLLVITADGAVLFVPKGEYERAAEESA 66 (132)
T ss_dssp HHHHHHHHHHHTT---SEEEEESH------------HHHHHHHS--ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHCC--CCEEEEcCh------------hhceEecCCCcCCCcceEEEEecccCcEEEeccccHHHHHHhhc
Confidence 8999999999998 999999999 899999999 88888877 89999999999 88888887762
Q ss_pred cCcEEEEEcCC-CCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhc
Q 006890 79 TGEWKLMRMLE-DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKN 147 (627)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~ 147 (627)
.. .+++.+.+ .+.+.++|++.+.+.++||+|++.+|+..++.|++.++ +.++++. +++|+++|++
T Consensus 67 ~~-~~v~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~~--~~~~v~~-~~~i~~~R~I 132 (132)
T PF01321_consen 67 PD-DEVVEYEDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEALP--GAEFVDA-SPLIEELRMI 132 (132)
T ss_dssp TS-SEEEEESTHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHST--TSEEEEE-HHHHHHHHTS
T ss_pred CC-ceEEEEecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhCC--CCEEEEc-HHHHHHcCcC
Confidence 22 34454444 34567888888877799999999999999999999884 4699998 8899999974
|
5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B .... |
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.5e-15 Score=159.91 Aligned_cols=135 Identities=16% Similarity=0.211 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCc----eEEEEeCC-ceEEEEcchhHHHHh
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA----GLALITMN-EALLWTDGRYFLQAT 75 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~----g~~vvt~~-~a~l~tD~RY~~qA~ 75 (627)
|.+|+++||+.|++++ +|++||+++ .|++|||||+++. ..+||+.+ +.+|+++.++..+++
T Consensus 11 ~~~Rl~rl~~~m~~~~--lDalli~~~------------~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~ 76 (391)
T TIGR02993 11 YQARLDKTRAAMEARG--IDLLIVTDP------------SNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRGQDANGAK 76 (391)
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEcCc------------ccceeeccCCCCceEEEEEEEEcCCCceEEEehhhhhhhHh
Confidence 4679999999999987 999999999 8999999999854 35667755 467777766666666
Q ss_pred ccccC-cEEEEEcC------CCCCHHHHHHhhCCC----CCEEEEcCCC--CCHHHHHHHHHHHHhcCCeEEecCcChhh
Q 006890 76 QELTG-EWKLMRML------EDPAVDVWMANNLPN----DAAIGVDPWC--VSIDTAQRWERAFAKKQQKLVQTSTNLVD 142 (627)
Q Consensus 76 ~~~~~-~~~~~~~~------~~~~~~~~l~~~l~~----~~~vg~d~~~--~s~~~~~~l~~~l~~~~~~l~~~~~~lid 142 (627)
.+... .-.+..+. ..+...+++.+.+++ .++||+|.+. +|+..+..|++.++ ++++++. +.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~--~~~~~d~-~~~~~ 153 (391)
T TIGR02993 77 RTAFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLP--NARFVDA-TALVN 153 (391)
T ss_pred heeeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCC--CCEEEeh-HHHHH
Confidence 44311 00111111 112233455554432 2479999774 89999999998874 4789988 88999
Q ss_pred HhhhcCCCCC
Q 006890 143 KVWKNRPPVE 152 (627)
Q Consensus 143 ~lr~~k~~~e 152 (627)
++|.+|++.|
T Consensus 154 ~lR~iKs~~E 163 (391)
T TIGR02993 154 WQRAVKSETE 163 (391)
T ss_pred HHHccCCHHH
Confidence 9999999998
|
Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown. |
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.2e-14 Score=151.62 Aligned_cols=329 Identities=19% Similarity=0.247 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccccccccccc--Cc--eEEEEeCCc-eEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTG--SA--GLALITMNE-ALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtg--s~--g~~vvt~~~-a~l~tD~RY~~qA~~ 76 (627)
..|+.+++..|.+++ +|+++++++ .|++|+|||+. .. ..++++.++ +.|+++++|..++..
T Consensus 11 ~~rl~~~~~~~~~~~--~~~~~~~~~------------~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 76 (384)
T COG0006 11 RARLARLRELMEEAG--LDALLLTSP------------SNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGRDEEAAKE 76 (384)
T ss_pred HHHHHHHHHHHHHcC--CcEEEecCC------------CceEEEeCCCCCcccceEEEEEcCCCceEEEEcchhHHHHHh
Confidence 468999999999987 999999999 99999999994 33 355666654 999999999999988
Q ss_pred cccC---cEEEEEcCCCCC-HHHHHHhhCCC----CCEEEEcCCC--CCHHHHHHHHHHHHhcCCeEEecCcChhhHhhh
Q 006890 77 ELTG---EWKLMRMLEDPA-VDVWMANNLPN----DAAIGVDPWC--VSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWK 146 (627)
Q Consensus 77 ~~~~---~~~~~~~~~~~~-~~~~l~~~l~~----~~~vg~d~~~--~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~ 146 (627)
.... ++..+.....+. ..+.+...+.. ...+|++... +++..+..++..++. .++++. +++++++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~--~~~~~~-~~~i~~lR~ 153 (384)
T COG0006 77 TSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPR--AELVDA-SDLVDRLRL 153 (384)
T ss_pred hcccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCC--CEEecc-HHHHHHHHh
Confidence 7752 355554443322 22333333322 3679999875 899999999988754 388988 899999999
Q ss_pred cCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEE
Q 006890 147 NRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLY 226 (627)
Q Consensus 147 ~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~ 226 (627)
+|++.| |+.+|++++.. +..+.... .|+- ..
T Consensus 154 iKs~~E-------------------I~~ir~A~~i~--~~a~~~~~---~~~~-------------------------~g 184 (384)
T COG0006 154 IKSPAE-------------------IAKIRKAAEIA--DAALEAAL---EAIR-------------------------PG 184 (384)
T ss_pred cCCHHH-------------------HHHHHHHHHHH--HHHHHHHH---Hhcc-------------------------CC
Confidence 999998 99999988652 22221111 1110 13
Q ss_pred EeCCCCCHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCCeEEe
Q 006890 227 VDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKVLL 299 (627)
Q Consensus 227 v~~~~~~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~~~~~ 299 (627)
+++.++...+...+...|.+..+|+.+ +++|.+.+ |..+ ..++.|.+|.+..-.....-+ ...+.
T Consensus 185 ~tE~ev~a~l~~~~~~~G~~~~sf~~i------v~~G~n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDi--TRT~~ 256 (384)
T COG0006 185 MTEAEIAAELEYALRKGGAEGPSFDTI------VASGENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDI--TRTFP 256 (384)
T ss_pred CcHHHHHHHHHHHHHHcCCCccCcCcE------EeccccccCcCCCCCcccccCCCEEEEEeeeEECCccccc--eeEEe
Confidence 467777777887777788777788888 67777766 4322 468899999874321111101 01122
Q ss_pred cCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHH
Q 006890 300 QQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLES 379 (627)
Q Consensus 300 ~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~ 379 (627)
...|-..+ |+...+.-.|+.+.++.+ +||++=.++.....+
T Consensus 257 ~G~~~~~~------------~~iy~~V~~aq~aa~~~~---------------------------rpG~~~~~vd~~ar~ 297 (384)
T COG0006 257 IGKPSDEQ------------REIYEAVLEAQEAAIAAI---------------------------RPGVTGGEVDAAARQ 297 (384)
T ss_pred cCCCCHHH------------HHHHHHHHHHHHHHHHHh---------------------------CCCCcHHHHHHHHHH
Confidence 22222222 244555555555555543 799999999998888
Q ss_pred HHHhhcCCCCCcCC--cccccCCCcccccccCC---CCccCCCCCCCeEEEeecceecC-cccceEEEEecCC
Q 006890 380 FRASKEHFRGLSFP--TISSVGPNAAIMHYSPQ---SETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFGK 446 (627)
Q Consensus 380 ~~~~~~g~~~~~f~--~i~~~G~n~a~~h~~~~---~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G~ 446 (627)
...+ .|+ +..|. +--+.| ..--.|=.|. ...+..|++|-++.+..|..+.| +-.-+.-++++.+
T Consensus 298 ~i~~-~g~-~~~~~h~~GHgvG-~~l~vhE~p~~~~~~~~~~L~~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 298 VLEK-AGY-GLYFLHGTGHGVG-FVLDVHEHPQYLSPGSDTTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred HHHh-cCC-cccccCCccccCC-CCcccCcCccccCCCCCccccCCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 7643 222 22222 112223 1122454442 33458999999999999966654 5678888998865
|
|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=141.30 Aligned_cols=132 Identities=14% Similarity=0.230 Sum_probs=97.5
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCc---------eEEEEeCC-c-eE-EEEcchhH
Q 006890 4 ILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA---------GLALITMN-E-AL-LWTDGRYF 71 (627)
Q Consensus 4 Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~---------g~~vvt~~-~-a~-l~tD~RY~ 71 (627)
-+++||+.|+++| +|+++|+++ .|++|||||.+.. ..+||+.+ + +. ++++..+.
T Consensus 12 ~~~rlr~~m~~~g--lD~lvl~~p------------~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~ 77 (406)
T PRK14575 12 VSRKLRTIMERDN--IDAVIVTTC------------DNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEA 77 (406)
T ss_pred HHHHHHHHHHHcC--CCEEeecCc------------chheeecccccccceecccCCceEEEEEcCCCCCceEEechhhh
Confidence 4679999999998 999999999 8999999998743 34788877 3 34 88888888
Q ss_pred HHHhccccC----cEEEEEcCCCCC-----------------HH---HHHHhhC----CCCCEEEEcCCCCCHHHHHHHH
Q 006890 72 LQATQELTG----EWKLMRMLEDPA-----------------VD---VWMANNL----PNDAAIGVDPWCVSIDTAQRWE 123 (627)
Q Consensus 72 ~qA~~~~~~----~~~~~~~~~~~~-----------------~~---~~l~~~l----~~~~~vg~d~~~~s~~~~~~l~ 123 (627)
..++.+... .+..+...++|. .. +.+++.+ ..+++||+|.+.++...++.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~ 157 (406)
T PRK14575 78 ASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVID 157 (406)
T ss_pred hhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHH
Confidence 888754321 123333322221 01 1333333 2457999999999999999998
Q ss_pred HHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 124 RAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 124 ~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
..++ +.++++. +++++++|.+|++.|
T Consensus 158 ~~lp--~~~~~d~-~~~l~~lR~iKs~~E 183 (406)
T PRK14575 158 AVMP--NVDFVDS-SSIFNELRVIKSPWE 183 (406)
T ss_pred HhCC--CCeEEEc-HHHHHHHHhcCCHHH
Confidence 8774 4789988 889999999999998
|
|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.6e-11 Score=131.23 Aligned_cols=130 Identities=18% Similarity=0.248 Sum_probs=89.0
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC-------ce--EEEEeCC-c--eEEEEcchhHHH
Q 006890 6 AALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS-------AG--LALITMN-E--ALLWTDGRYFLQ 73 (627)
Q Consensus 6 ~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs-------~g--~~vvt~~-~--a~l~tD~RY~~q 73 (627)
+++|+.|+++| +|++|++++ .|++|||||+.. .+ ++|++.+ + ..++++.-....
T Consensus 14 ~r~r~~M~~~g--ldalll~~p------------~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~ 79 (405)
T PRK14576 14 RKARVVMEREG--IDALVVTVC------------DNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAAS 79 (405)
T ss_pred HHHHHHHHHcC--CCEEEeccc------------cceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhh
Confidence 48999999998 999999999 899999999965 12 2333345 3 367887776666
Q ss_pred Hhcccc----CcEEEEEcCCCCC--H-----------------HHHHHhhCC----CCCEEEEcCCCCCHHHHHHHHHHH
Q 006890 74 ATQELT----GEWKLMRMLEDPA--V-----------------DVWMANNLP----NDAAIGVDPWCVSIDTAQRWERAF 126 (627)
Q Consensus 74 A~~~~~----~~~~~~~~~~~~~--~-----------------~~~l~~~l~----~~~~vg~d~~~~s~~~~~~l~~~l 126 (627)
++.... ..+..+...++|. + .+.+++.+. .+++||+|.+.++...+..|+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~ 159 (405)
T PRK14576 80 THFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA 159 (405)
T ss_pred hhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC
Confidence 652210 0122222222221 1 122333332 346999999889999998888776
Q ss_pred HhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 127 AKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 127 ~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
.+.++++. +++++++|.+|++.|
T Consensus 160 --~~~~~vd~-~~~l~~lR~iKs~~E 182 (405)
T PRK14576 160 --PGLKLVDS-TALFNEIRMIKSPWE 182 (405)
T ss_pred --CCCeEEEc-HHHHHHHHcCCCHHH
Confidence 34789988 789999999999998
|
|
| >KOG2775 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-10 Score=112.40 Aligned_cols=163 Identities=16% Similarity=0.161 Sum_probs=128.2
Q ss_pred CCCCcCHHHHHHHHHHHHH----hhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceE
Q 006890 364 GTVKLTEVTVSDKLESFRA----SKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDIT 439 (627)
Q Consensus 364 ~~~g~tE~ei~~~l~~~~~----~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~t 439 (627)
++||||-.||...|+..-. ..+-..|..|||-++ -|.+..||+|+.+...+|+.+|+..||+|.+.+|-..|.+
T Consensus 106 ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpNaGd~tVLqydDV~KiDfGthi~GrIiDsA 183 (397)
T KOG2775|consen 106 IKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPNAGDKTVLKYDDVMKIDFGTHIDGRIIDSA 183 (397)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCCCCCceeeeecceEEEeccccccCeEeeee
Confidence 4899999999999986321 223345789998766 5666689999988778999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC----------CCcccccccccccCccc
Q 006890 440 RTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL----------DYRHGTGHGVGSYLNVH 509 (627)
Q Consensus 440 RT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~----------~~~h~~GHgvG~~l~vh 509 (627)
.|+.|. |....+..+|.+|....+...-- .++..+|-+++.+++..+-. ....-.||+|+.| .+|
T Consensus 184 FTv~F~---p~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyEvEi~Gk~~~VKpIrnLnGHSI~~y-rIH 258 (397)
T KOG2775|consen 184 FTVAFN---PKYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYEVEINGKTYQVKPIRNLNGHSIAQY-RIH 258 (397)
T ss_pred eEEeeC---ccccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheEEEeCCceecceeccccCCCcccce-Eee
Confidence 999984 44556778888888888777653 67889999999999988754 2456689999987 678
Q ss_pred cCCCcC--CCCCCCCcccCCcEEeeCc
Q 006890 510 EGPQSI--SFKPRNVPIHASMTATDEP 534 (627)
Q Consensus 510 E~P~~~--~~~~~~~~l~~Gmv~siEP 534 (627)
-+-.+. ..+ ....+++|.+++||.
T Consensus 259 ~gksVPiVkgg-e~trmee~e~yAIET 284 (397)
T KOG2775|consen 259 GGKSVPIVKGG-EQTRMEEGEIYAIET 284 (397)
T ss_pred cCcccceecCC-cceeecCCeeEEEEe
Confidence 653331 122 678899999999995
|
|
| >PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-11 Score=107.65 Aligned_cols=127 Identities=18% Similarity=0.276 Sum_probs=91.6
Q ss_pred HHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEE-EECCceEEEEeCCCCCHHHHHhhhhCCeEEee
Q 006890 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAI-VTTNAAFLYVDKRKVSSEVISFLKESGVEVRD 249 (627)
Q Consensus 171 ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~l-v~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~ 249 (627)
|++++|++|++.|+|++++++++|+.||||++ +.|...++++ ++.++.+++++..+......+. ....++..
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~-----~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~ 73 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFR-----WQPGERPVLLVITADGAVLFVPKGEYERAAEES--APDDEVVE 73 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS-------ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCC-----cCCCcceEEEEecccCcEEEeccccHHHHHHhh--cCCceEEE
Confidence 79999999999999999999999999999997 2223334555 7888878899866554443332 35788899
Q ss_pred CCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhhc
Q 006890 250 YDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAI 310 (627)
Q Consensus 250 y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~i 310 (627)
|.+..+.+..+....+. .+++||+|.+.+|+..++.| ++.+++++++++..+|+|
T Consensus 74 ~~~~~~~~~~~l~~~~~------~~~~igve~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 74 YEDPYEAIAEALKKLGP------EGKRIGVEPDSLSAAEYQRLQEALPGAEFVDASPLIEELRMI 132 (132)
T ss_dssp ESTHHHHHHHHHHHHTT------TTSEEEEETTTSBHHHHHHHHHHSTTSEEEEEHHHHHHHHTS
T ss_pred EecccchHHHHHHHhCC------CCCEEEEcCCcChHHHHHHHHHhCCCCEEEEcHHHHHHcCcC
Confidence 88833333333332221 34899999998898887766 556999999999999986
|
5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B .... |
| >KOG2776 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-08 Score=101.82 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=119.6
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHH-----
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR----- 381 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~----- 381 (627)
=..+-++.-+...|-|+.++..++..+.+.+ .+|.+-.||...-+.+.
T Consensus 12 d~tia~~~vvtKYk~AgeI~n~~lk~V~~~~---------------------------~~gasv~eiC~~GD~~i~E~t~ 64 (398)
T KOG2776|consen 12 DKTIANDSVVTKYKMAGEIVNKVLKSVVELC---------------------------QPGASVREICEKGDSLILEETG 64 (398)
T ss_pred ccccccHHHHhhhhhHHHHHHHHHHHHHHHh---------------------------cCCchHHHHHHhhhHHHHHHHH
Confidence 3456678888999999999999999887765 56777777777654432
Q ss_pred ----HhhcCCCCCcCCcccccCCCcccccccCCCCc-cCCCCCCCeEEEeecceecCcccceEEEEecCCCC-----HHH
Q 006890 382 ----ASKEHFRGLSFPTISSVGPNAAIMHYSPQSET-CAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPS-----AHE 451 (627)
Q Consensus 382 ----~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~-~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~-----~e~ 451 (627)
..+....|.+|||-++ .|-+.+||.|-.+. +..|++||+|-||+|++.+||++.++.|+++|.++ ...
T Consensus 65 kiYK~eK~~~KGIAfPT~Is--vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~k 142 (398)
T KOG2776|consen 65 KIYKKEKDFEKGIAFPTSIS--VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRK 142 (398)
T ss_pred HHHhhhhhhhccccccceec--ccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCch
Confidence 1134457899999877 56677999996543 67899999999999999999999999999998543 344
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC
Q 006890 452 KACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL 492 (627)
Q Consensus 452 ~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~ 492 (627)
-++..++-.|.+++++.++| |.+-.+|-.+..+...+++.
T Consensus 143 ADvI~AAh~A~eaa~rllkp-gn~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 143 ADVIAAAHLAAEAALRLLKP-GNTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred hHHHHHHHHHHHHHHHHhCC-CCCCchhhHHHHHHHHHhCC
Confidence 45555555566778888897 98888887777766666553
|
|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.8e-06 Score=89.15 Aligned_cols=106 Identities=14% Similarity=0.207 Sum_probs=75.8
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEee
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRD 249 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~ 249 (627)
.|++++|+.|+++++|+++++.++|+.|||||+|+. ++++|+.++..++++.++..++..+ . .+.++..
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~ry~~qa~~~-~--~~~~v~~ 70 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDSRYYADVEAR-A--QGYQLHL 70 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCcchHHHHHhh-C--CCceEEE
Confidence 489999999999999999999999999999999864 5788898888899988765543222 2 2344443
Q ss_pred CCc---hhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC
Q 006890 250 YDA---VSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS 294 (627)
Q Consensus 250 y~~---~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~ 294 (627)
+.. +.+.+..+.. . .+.++|++|...+++..+..|.+
T Consensus 71 ~~~~~~~~~~L~~~L~----~----~~~~~Ig~e~~~~s~~~~~~L~~ 110 (361)
T PRK09795 71 LDATNTLTTIVNQIIA----D----EQLQTLGFEGQQVSWETAHRWQS 110 (361)
T ss_pred ecCCccHHHHHHHHHH----h----cCCcEEEEecCcccHHHHHHHHH
Confidence 322 1223333321 1 12368999998889888877753
|
|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00017 Score=79.16 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCc----CccCcCccccccccccccccCceEEEEeCC-----ceEEEEcch
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYH----QSEYVSARDKRREFVSGFTGSAGLALITMN-----EALLWTDGR 69 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h----~sey~~~~~~~~~ylTGFtgs~g~~vvt~~-----~a~l~tD~R 69 (627)
.+|.++|.+.|.+. .++||++.+.. -.+|.=-.+.|.+|||||.--.+++|+.++ +..||++.+
T Consensus 7 ~~rR~~l~~~~~~~----~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~~~~Lf~~~~ 79 (438)
T PRK10879 7 QRRRQALLAKMQPG----SAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVR 79 (438)
T ss_pred HHHHHHHHhhCCCC----cEEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 45777777777653 46677766554 345665667889999999977676666442 246777554
|
|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00049 Score=72.40 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=40.7
Q ss_pred CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 105 AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 105 ~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
++||+|...+|...++.|++.++ +.++++. +++++++|.+|++.|
T Consensus 56 ~rigve~~~~~~~~~~~l~~~l~--~~~~~d~-~~~i~~lR~iKs~~E 100 (323)
T PRK15173 56 KKIAIDLNIMSNGGKRVIDAVMP--NVDFVDS-SSIFNELRVIKSPWE 100 (323)
T ss_pred CEEEEecCccCHHHHHHHHhhCC--CCeEEEh-HHHHHHHHccCCHHH
Confidence 68999999999999999998874 4789888 889999999999998
|
|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0029 Score=68.02 Aligned_cols=113 Identities=14% Similarity=0.078 Sum_probs=79.1
Q ss_pred cccceEEEEecCCCC--HHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Cc---ccccccccccCc
Q 006890 434 GTTDITRTFHFGKPS--AHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YR---HGTGHGVGSYLN 507 (627)
Q Consensus 434 y~~D~tRT~~~G~p~--~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~---h~~GHgvG~~l~ 507 (627)
..+++.|+..+..|. +.+|++...+.+++.++.++++| |++-.+|+.++++.+.+.|.. .+ ++..-++. ..
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svc--ts 203 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCC--TS 203 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCceee--ec
Confidence 356777888887655 45678888888899999999997 999999999999998888741 11 11111111 11
Q ss_pred ccc-CCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 508 VHE-GPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 508 vhE-~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+.+ -+. ..+++.+|++|+++.++.|.+..|. ..-+..|++|.
T Consensus 204 ~N~~i~H---gip~~r~L~~GDiV~iDvg~~~~GY-~aD~tRT~~VG 246 (396)
T PLN03158 204 VNEVICH---GIPDARKLEDGDIVNVDVTVYYKGC-HGDLNETFFVG 246 (396)
T ss_pred ccccccC---CCCCCccCCCCCEEEEEEeEEECCE-EEeEEeEEEcC
Confidence 111 111 1125678999999999999998774 45888898884
|
|
| >KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0035 Score=68.53 Aligned_cols=102 Identities=21% Similarity=0.274 Sum_probs=75.5
Q ss_pred HHHHHHHHhhccCCcEEEEecCCc------------cceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHH
Q 006890 171 KLKELREKLTNEKARGIIITTLDE------------VAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 171 ri~~lr~~m~~~~~d~lll~~~dn------------i~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~ 238 (627)
++.++|+.|+..+++++++.+.|. .+|++||.|+. ++++|+..++.|++|.+...++..
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD~RY~~QA~~- 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTDGRYFQQAEQ- 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEccHHHHHHHh-
Confidence 689999999999999999999884 79999999986 899999999999999998877644
Q ss_pred hhhhCCeE-EeeCCc---hhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc
Q 006890 239 FLKESGVE-VRDYDA---VSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL 292 (627)
Q Consensus 239 ~l~~~~v~-v~~y~~---~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l 292 (627)
.|.. .-. .+...+ +.+.+.... ..+.+||+|+..+++..+..+
T Consensus 82 qld~-~W~l~k~~~~~~~v~~wl~~~l----------~~~~~vG~Dp~Lis~~~~~~~ 128 (606)
T KOG2413|consen 82 QLDS-NWTLMKMGEDVPTVEEWLAKVL----------PEGSRVGIDPTLISFDAWKQL 128 (606)
T ss_pred hhcc-cceeeeccCCCccHHHHHHHhC----------CCccccccCcceechhHHHhH
Confidence 3432 111 112222 223332222 357889999998888777654
|
|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.021 Score=57.22 Aligned_cols=99 Identities=16% Similarity=0.090 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Ccc---cccccccccCccccCCCcCCCCCCCCcc
Q 006890 449 AHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRH---GTGHGVGSYLNVHEGPQSISFKPRNVPI 524 (627)
Q Consensus 449 ~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h---~~GHgvG~~l~vhE~P~~~~~~~~~~~l 524 (627)
+..|++...+.+++.++.++++| |++-.+|..++++.+++.|.. +.+ +....+....+ ...|. ..+++.+|
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~h---~~~~~~~l 76 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVN-EVVCH---GIPDDRVL 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCC-CceeC---CCCCCccc
Confidence 35788999999999999999997 999999999999999999862 111 00011110011 00111 11256789
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
++|+++.+++|....| |...++.|+++.
T Consensus 77 ~~Gd~v~id~g~~~~G-Y~ad~~RT~~~G 104 (238)
T cd01086 77 KDGDIVNIDVGVELDG-YHGDSARTFIVG 104 (238)
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEECC
Confidence 9999999999986655 556889998885
|
E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. |
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.051 Score=54.99 Aligned_cols=95 Identities=13% Similarity=0.005 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--Cccccccc----ccccCccccCCCcCCCCCCCCc
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHG----VGSYLNVHEGPQSISFKPRNVP 523 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHg----vG~~l~vhE~P~~~~~~~~~~~ 523 (627)
.+|++...+.+++.++.++++| |++-.+|+.++++.+++.|.. +.+..++. .| .+ .-.| ...+++.+
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g--~~-~~~~---h~~~~~~~ 85 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTS--VN-EVVC---HGIPSDKV 85 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEec--cc-ceee---cCCCCCcc
Confidence 3577888888899999999997 999999999999999998863 11111111 11 11 0011 11125688
Q ss_pred ccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 524 IHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 524 l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|++||++.++.|.... .|..-+.-|+++
T Consensus 86 l~~Gd~v~id~g~~~~-gY~~d~~RT~~v 113 (252)
T PRK05716 86 LKEGDIVNIDVTVIKD-GYHGDTSRTFGV 113 (252)
T ss_pred cCCCCEEEEEEEEEEC-CEEEEeEEEEEC
Confidence 9999999999998764 466677777776
|
|
| >KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.086 Score=55.29 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcC-CCCcCccCc---CccccccccccccccCceEEEEeC-C----ceEEEEcchh
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPS-EDYHQSEYV---SARDKRREFVSGFTGSAGLALITM-N----EALLWTDGRY 70 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~-~d~h~sey~---~~~~~~~~ylTGFtgs~g~~vvt~-~----~a~l~tD~RY 70 (627)
.+|..+|-+++.++ +.+||.+ +=-|+|-=+ =-.+.+.+||||+.-..+++++++ | ...+|.+++-
T Consensus 68 ~~RR~rl~~ll~~~----a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~kd 141 (488)
T KOG2414|consen 68 KERRSRLMSLLPAN----AMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPKD 141 (488)
T ss_pred HHHHHHHHHhCCcc----cEEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCCC
Confidence 56888888888775 4555544 445666533 366789999999999999888853 2 2346665543
|
|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.079 Score=53.68 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=70.5
Q ss_pred EEEEecCCCCH--HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Ccc---ccc--ccccccCcccc
Q 006890 439 TRTFHFGKPSA--HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRH---GTG--HGVGSYLNVHE 510 (627)
Q Consensus 439 tRT~~~G~p~~--e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h---~~G--HgvG~~l~vhE 510 (627)
.|++.+-.+.+ ..|++...+.+++.++.+.++| |++-.+|...++..+.+.|.. ..+ +.. -..| .+ ..
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~ 80 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCIS--VN-EE 80 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEec--CC-Ce
Confidence 57777754433 3567777777888888899997 999999999999999998863 111 111 1112 21 11
Q ss_pred CCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 511 GPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 511 ~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
.++. .+++.+|++|.++.++.|....| |..-+.-|+++
T Consensus 81 ~~h~---~p~~~~l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~v 118 (255)
T PRK12896 81 VAHG---IPGPRVIKDGDLVNIDVSAYLDG-YHGDTGITFAV 118 (255)
T ss_pred eEec---CCCCccCCCCCEEEEEEeEEECc-EEEeeEEEEEC
Confidence 1211 12557899999999999987654 55566666666
|
|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.16 Score=52.57 Aligned_cols=96 Identities=8% Similarity=0.019 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCCCCCCCcccCCcE
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMT 529 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv 529 (627)
.+|++...+.+++.++.+.++| |++..+|.....+.+.+.|....+.++=+++.. ..|-.|.. + ++.+|++|++
T Consensus 3 ~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~~afp~~is~n~~-~~H~~p~~---~-d~~~l~~GDv 76 (291)
T cd01088 3 KYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAGPAFPVNLSINEC-AAHYTPNA---G-DDTVLKEGDV 76 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCCCCCceeccCCE-eeCCCCCC---C-CCcccCCCCE
Confidence 5678888889999999999997 999999999999999998853222222111110 11222211 1 4578999999
Q ss_pred EeeCceeeecCccEEEEeEeeEE
Q 006890 530 ATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 530 ~siEPg~y~~~~~GvriEd~v~V 552 (627)
+.++.|...+| |-.-+.-|+.+
T Consensus 77 V~iD~G~~~dG-Y~sD~arT~~v 98 (291)
T cd01088 77 VKLDFGAHVDG-YIADSAFTVDF 98 (291)
T ss_pred EEEEEEEEECC-EEEEEEEEEec
Confidence 99999987765 33334444444
|
E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. |
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.12 Score=51.93 Aligned_cols=83 Identities=18% Similarity=0.118 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC----CcccccccccccCcc-----ccCCCcCCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD----YRHGTGHGVGSYLNV-----HEGPQSISFKPRN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----~~h~~GHgvG~~l~v-----hE~P~~~~~~~~~ 521 (627)
+|++-..+.+++..+...++| |++..+|+.++++++.+.|.. -.++..-.+. +++ |--|. ++
T Consensus 14 ~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~c--iSvNe~v~HgiP~------d~ 84 (255)
T COG0024 14 MREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTC--ISVNEVVAHGIPG------DK 84 (255)
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceE--eehhheeeecCCC------CC
Confidence 456666677778888888997 999999999999999986651 1122222233 333 22232 46
Q ss_pred CcccCCcEEeeCceeeecCcc
Q 006890 522 VPIHASMTATDEPGYYEDGNF 542 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~ 542 (627)
.+|++|.++.|.-|.+.+|.+
T Consensus 85 ~vlk~GDiv~IDvg~~~dG~~ 105 (255)
T COG0024 85 KVLKEGDIVKIDVGAHIDGYI 105 (255)
T ss_pred cccCCCCEEEEEEEEEECCee
Confidence 789999999999999988754
|
|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.15 Score=56.08 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=37.2
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCcCc-----cCcCcccccccccccccc-CceEEEEeC--C-ceEEEEc
Q 006890 6 AALRSLMSSHDPPLHALVVPSEDYHQS-----EYVSARDKRREFVSGFTG-SAGLALITM--N-EALLWTD 67 (627)
Q Consensus 6 ~~Lr~~m~~~~~~~Da~li~~~d~h~s-----ey~~~~~~~~~ylTGFtg-s~g~~vvt~--~-~a~l~tD 67 (627)
+++++.|++.+ .+++||.+..+... +|.=-.+.+.+||||+.- ..+++++.. + +.+||.+
T Consensus 17 ~r~~~~~~~~~--~~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~l~~~ 85 (443)
T PRK13607 17 QRTRDALAREG--LDALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYQP 85 (443)
T ss_pred HHHHHHHhccC--CCEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEEEEec
Confidence 34445666554 78888887766533 455566678889999964 344455432 2 4556654
|
|
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.25 Score=49.81 Aligned_cols=118 Identities=14% Similarity=0.183 Sum_probs=77.8
Q ss_pred EeecceecCcccceEEEEecCCCCHH----HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC--------
Q 006890 425 CDSGAQYQDGTTDITRTFHFGKPSAH----EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-------- 492 (627)
Q Consensus 425 iD~g~~y~gy~~D~tRT~~~G~p~~e----~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-------- 492 (627)
.|.|.....-..+.++-+-+ ++++ +|+...+..+..+.+..+++| |++..+||.++.+..-+.|-
T Consensus 97 a~~g~s~se~~~~~s~~i~i--~~~e~ie~mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~YPSPLnYy 173 (369)
T KOG2738|consen 97 ADSGVSLSEQPEISSNEIKI--LDPEGIEGMRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAYPSPLNYY 173 (369)
T ss_pred hhcCCcccccccccccceec--cCHHHHHHHHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCcCCCcccC
Confidence 34454444444455554554 4444 566777778888899999998 99999999999998888874
Q ss_pred CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEec
Q 006890 493 DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554 (627)
Q Consensus 493 ~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~ 554 (627)
.|+..+--+|--. -.|-- |+.++||.|.++.|...+|..|..| -+..|++|.+
T Consensus 174 ~FPKS~CTSVNEv-iCHGI-------PD~RpLedGDIvNiDVtvY~~GyHG-DlneTffvG~ 226 (369)
T KOG2738|consen 174 GFPKSVCTSVNEV-ICHGI-------PDSRPLEDGDIVNIDVTVYLNGYHG-DLNETFFVGN 226 (369)
T ss_pred CCchhhhcchhhe-eecCC-------CCcCcCCCCCEEeEEEEEEeccccC-ccccceEeec
Confidence 1333222222210 01111 2678999999999999999887544 3556677765
|
|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
Probab=91.25 E-value=1.5 Score=47.36 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcc--ccccccccc--Ccc-----ccCCCcCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRH--GTGHGVGSY--LNV-----HEGPQSISFKPR 520 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h--~~GHgvG~~--l~v-----hE~P~~~~~~~~ 520 (627)
.|++-..+.+++..+...++| |++-.+|+..+.+.+++.+- -|.. ...+|+++. +.+ |-.|.. +.+
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~---~d~ 97 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLK---SDQ 97 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCC---CCC
Confidence 455556666677788888997 99999999999888887542 1111 112233311 111 222321 002
Q ss_pred CCcccCCcEEeeCceeeecCccEEEEeEeeEEec
Q 006890 521 NVPIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554 (627)
Q Consensus 521 ~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~ 554 (627)
+..|++|.++.+.-|...+| |..-+..|++|.+
T Consensus 98 ~~~Lk~GDvVkIDlG~~idG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 98 DYILKEGDVVKIDLGCHIDG-FIALVAHTFVVGV 130 (389)
T ss_pred CcCcCCCCEEEEEEEEEECC-EEEEEEEEEEECC
Confidence 47899999999999998876 5666888888853
|
Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. |
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.46 E-value=1.6 Score=42.42 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHH-HHHcCCC-CcccccccccccCcccc-CCCcCCCCCCCCcccC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLP-LWKYGLD-YRHGTGHGVGSYLNVHE-GPQSISFKPRNVPIHA 526 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~-l~~~G~~-~~h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~~ 526 (627)
..|++...+.+++.++.+.++| |++-.+|...+.+. +.+.|.. ..+..-=+.| .+. .|.. .+++.+|++
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~~~~---~~~~~~l~~ 73 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSG----PNTDLPHY---TPTDRRLQE 73 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEEC----CCCGETTT---BCCSSBEST
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecC----Ccceecce---eccceeeec
Confidence 4678888999999999999997 99999999999887 6777742 2222111122 111 1222 225678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|+++.++-|.-.. .|-.-+.-|+++
T Consensus 74 gd~v~id~~~~~~-gy~~d~~Rt~~~ 98 (207)
T PF00557_consen 74 GDIVIIDFGPRYD-GYHADIARTFVV 98 (207)
T ss_dssp TEEEEEEEEEEET-TEEEEEEEEEES
T ss_pred CCcceeeccceee-eeEeeeeeEEEE
Confidence 9999999877655 355566666655
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A .... |
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
Probab=89.44 E-value=2.9 Score=41.94 Aligned_cols=94 Identities=13% Similarity=0.096 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccc-cCCCcCCCCCCCCcccCCc
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVH-EGPQSISFKPRNVPIHASM 528 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vh-E~P~~~~~~~~~~~l~~Gm 528 (627)
..|++...+.++..++.+.++| |++-.+|...+...+.+.|... ..+.-|+ .+.+ ..|. ..+++.+|++|.
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~p-G~tE~ei~~~~~~~~~~~G~~~--~~~~~v~--~g~~~~~~H---~~~~~~~l~~Gd 74 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRP-GMSEYELEAEFEYEFRSRGARL--AYSYIVA--AGSNAAILH---YVHNDQPLKDGD 74 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCCc--CCCCeEE--ECCCccccC---CCcCCCcCCCCC
Confidence 4678888888899999999997 9999999999999999988651 1122222 1111 1222 122567899999
Q ss_pred EEeeCceeeecCccEEEEeEeeEE
Q 006890 529 TATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 529 v~siEPg~y~~~~~GvriEd~v~V 552 (627)
++.++.|....| |-.-+.-|+.|
T Consensus 75 ~v~vD~g~~~~G-Y~ad~~Rt~~v 97 (243)
T cd01087 75 LVLIDAGAEYGG-YASDITRTFPV 97 (243)
T ss_pred EEEEEeCceECC-EeeeeeEEEEe
Confidence 999998876543 44555566655
|
E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro. |
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=89.31 E-value=3.3 Score=41.70 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc----ccccccccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~----h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++-..+.+++.++.+.++| |++-.+|.......+++.|.... .+....|....+ --.|+ ..+++.+|++
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n-~~~~H---~~p~~~~l~~ 87 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKP-GITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVN-DEMCH---AFPADVPLTE 87 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccC-CEeec---CCCCCcccCC
Confidence 355666667778888888997 99999999999999999886411 011111110011 00111 1125678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.++-|.-..| |..-+.-|++|
T Consensus 88 Gd~V~iD~g~~~~G-Y~sD~tRT~~v 112 (248)
T PRK12897 88 GDIVTIDMVVNLNG-GLSDSAWTYRV 112 (248)
T ss_pred CCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 99999998875443 44556666666
|
|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
Probab=89.06 E-value=2.7 Score=40.78 Aligned_cols=96 Identities=16% Similarity=0.097 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCCCCCcccCCc
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASM 528 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gm 528 (627)
-.|+....+.++..++.+.++| |++-.+|....+..+.+.|.. +.+.+--+.| .+ ...|.. .+++.+|++|.
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g--~~-~~~~h~---~~~~~~l~~gd 75 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASG--PN-SALPHG---VPSDRKIEEGD 75 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC--cc-ccccCC---CCCCcCcCCCC
Confidence 3577788888888888899997 999999999999999888863 3332222333 11 112221 12567899999
Q ss_pred EEeeCceeeecCccEEEEeEeeEEe
Q 006890 529 TATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 529 v~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
++.++.|.... .|-.-+..|+++.
T Consensus 76 ~v~id~g~~~~-gy~~d~~RT~~~g 99 (208)
T cd01092 76 LVLIDFGAIYD-GYCSDITRTVAVG 99 (208)
T ss_pred EEEEEeeeeEC-CEeccceeEEECC
Confidence 99999887544 3455566777765
|
The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline. |
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
Probab=87.86 E-value=4.7 Score=41.87 Aligned_cols=95 Identities=9% Similarity=0.065 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCCCCCCCcccCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHAS 527 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~G 527 (627)
..|++-..+.+++..+.+.++| |++-.+|.......+.+.|-. |+..+. ++.. ..|-.|.. . ++..|++|
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~vs--~n~~-~~H~~p~~---~-d~~~l~~G 78 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNIS--INEC-AAHFTPKA---G-DKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCccee--cCCE-eeCCCCCC---C-cCccCCCC
Confidence 3456666677778888889997 999999999999999998864 332221 2211 12433421 1 45689999
Q ss_pred cEEeeCceeeecCccEEEEeEeeEEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.++.++.|...+| |-.-+.-|+++.
T Consensus 79 DvV~iD~G~~~dG-Y~aD~arT~~vG 103 (295)
T TIGR00501 79 DVVKLDLGAHVDG-YIADTAITVDLG 103 (295)
T ss_pred CEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 9999999988765 555566676663
|
Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation. |
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=87.75 E-value=5.3 Score=41.35 Aligned_cols=95 Identities=9% Similarity=0.038 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCCCCCCCcccCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHAS 527 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~G 527 (627)
..|++-..+.++...+.+.++| |++-.||.......+.+.|.. |+..+ ++|.. ..|-.|.. . ++.+|++|
T Consensus 4 ~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~-~~H~~p~~---~-d~~~l~~G 75 (291)
T PRK08671 4 KYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNI--SINEV-AAHYTPSP---G-DERVFPEG 75 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCC-ccCCCCCC---C-CCcccCCC
Confidence 4577778888888888999997 999999999999999988753 32212 22311 12333321 1 35689999
Q ss_pred cEEeeCceeeecCccEEEEeEeeEEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.++.++.|....| |-.-+.-|+++.
T Consensus 76 DvV~iD~G~~~dG-Y~aD~arT~~vG 100 (291)
T PRK08671 76 DVVKLDLGAHVDG-YIADTAVTVDLG 100 (291)
T ss_pred CEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 9999999987665 444455566653
|
|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=87.53 E-value=3.6 Score=42.47 Aligned_cols=82 Identities=13% Similarity=0.040 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC-cccc-ccccccc----Ccc-ccCCCcCCCCCCCCc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY-RHGT-GHGVGSY----LNV-HEGPQSISFKPRNVP 523 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~-~h~~-GHgvG~~----l~v-hE~P~~~~~~~~~~~ 523 (627)
.|++-..+.+++.++.+.++| |++-.+|++.++..+++.|... .+|. |++.++- ..+ ..-|+. .+++.+
T Consensus 13 mr~A~~i~~~~~~~~~~~i~p-G~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H~---~p~~~~ 88 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKP-GVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAHA---FPRHYI 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccCC---CCCCcC
Confidence 456667777788888889997 9999999999999999887521 1111 1111100 111 112222 226678
Q ss_pred ccCCcEEeeCcee
Q 006890 524 IHASMTATDEPGY 536 (627)
Q Consensus 524 l~~Gmv~siEPg~ 536 (627)
|++|.++.++-|.
T Consensus 89 l~~Gd~v~iD~g~ 101 (286)
T PRK07281 89 LKEGDLLKVDMVL 101 (286)
T ss_pred cCCCCEEEEEecc
Confidence 9999999999875
|
|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
Probab=87.14 E-value=3.3 Score=39.72 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCCCCCCCcccCCcE
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMT 529 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv 529 (627)
..|+.-..+.++..++...++| |++-.++....++.+.+.|..+.+.+-=+.| +........+++.++++|.+
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g------~~~~~~h~~~~~~~i~~gd~ 75 (207)
T cd01066 3 RLRKAAEIAEAAMAAAAEAIRP-GVTEAEVAAAIEQALRAAGGYPAGPTIVGSG------ARTALPHYRPDDRRLQEGDL 75 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEEEC------ccccCcCCCCCCCCcCCCCE
Confidence 4577788888899999999997 9999999999999999988733332222222 10111112224578999999
Q ss_pred EeeCceeeecCccEEEEeEeeEEe
Q 006890 530 ATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 530 ~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+.++.|....| |-.-+..|+++.
T Consensus 76 v~~d~g~~~~g-y~~d~~rt~~~g 98 (207)
T cd01066 76 VLVDLGGVYDG-YHADLTRTFVIG 98 (207)
T ss_pred EEEEeceeECC-CccceeceeEcC
Confidence 99998876553 444455555553
|
Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation. |
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
Probab=86.94 E-value=4.9 Score=40.33 Aligned_cols=95 Identities=17% Similarity=0.092 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Cccc-cc----ccccccCccccCCCcCCCCCCCCcc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHG-TG----HGVGSYLNVHEGPQSISFKPRNVPI 524 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~-~G----HgvG~~l~vhE~P~~~~~~~~~~~l 524 (627)
.|++...+.+++.++.++++| |++-.+|...++..+++.|.. ..++ .+ .+.| .+ ...|+ ..+++.+|
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~~~H---~~~~~~~l 84 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKP-GVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCIS--VN-EVVIH---GIPDKKVL 84 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEec--cc-cEEEe---cCCCCccc
Confidence 345566666677778888997 999999999999999998853 1111 11 1122 11 11111 22257789
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
++|.++.++-|.-.. .|-.-+.-|++|.
T Consensus 85 ~~Gd~v~iD~g~~~~-gY~aD~~RT~~vG 112 (247)
T TIGR00500 85 KDGDIVNIDVGVIYD-GYHGDTAKTFLVG 112 (247)
T ss_pred CCCCEEEEEEEEEEC-CEEEEEEEEEEcC
Confidence 999999999887543 3555666677663
|
Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. |
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
Probab=86.72 E-value=4.9 Score=39.97 Aligned_cols=95 Identities=13% Similarity=0.022 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC---CCcccccc----cccccCccccCCCcCCCCCCCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL---DYRHGTGH----GVGSYLNVHEGPQSISFKPRNV 522 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~---~~~h~~GH----gvG~~l~vhE~P~~~~~~~~~~ 522 (627)
..|++-..+.+++.++.+.++| |++-.+|.+.+...+.+.|- .+.+..+. ..| .+ ...|.. .+++.
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~p-G~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G--~~-~~~~H~---~~~~r 75 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIRE-GVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSG--IN-TDGAHN---PVTNR 75 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEee--cc-ccccCC---CCCCc
Confidence 4677888888999999999997 99999999998888888763 22211110 122 11 112222 12567
Q ss_pred cccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 523 PIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 523 ~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|++|.++.++.|....| |..-++-|++|
T Consensus 76 ~l~~GD~v~~d~g~~~~G-Y~ad~~RT~~v 104 (228)
T cd01090 76 KVQRGDILSLNCFPMIAG-YYTALERTLFL 104 (228)
T ss_pred ccCCCCEEEEEEeEEECC-EeeeeEEEEEC
Confidence 899999999998865544 44556666665
|
E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea. |
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
Probab=86.29 E-value=6.5 Score=39.03 Aligned_cols=99 Identities=14% Similarity=0.065 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Ccc--ccccccccc--Cc-----cccCCCcCCCCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRH--GTGHGVGSY--LN-----VHEGPQSISFKP 519 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h--~~GHgvG~~--l~-----vhE~P~~~~~~~ 519 (627)
..|++-..+.+++.++.+.++| |++-.+|...+.+.+.+..-. |.. ....|.++. +. .|-.|... +
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~---~ 78 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKS---D 78 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCC---C
Confidence 4678888888999999999997 999999987777766663221 111 111222210 11 12222210 1
Q ss_pred CCCcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 520 RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 520 ~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
++.+|++|.++.++.|....| |-.-+..|++|.
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~G-Y~sD~tRT~~vG 111 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDG-YIAVVAHTIVVG 111 (228)
T ss_pred CCcccCCCCEEEEEEEEEECC-EEEEEEEEEEeC
Confidence 567899999999999987765 556677788774
|
Family members have been implicated in cell cycle control. |
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=84.95 E-value=6.3 Score=40.81 Aligned_cols=137 Identities=15% Similarity=0.123 Sum_probs=78.8
Q ss_pred cccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHH---HHHHHHHHHHHHHHHHhccC
Q 006890 394 TISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAH---EKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 394 ~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e---~~~~y~~v~~~~~~~~~~~~ 470 (627)
..+++|..--.+||.-..+ +...++ + ..|.+. +| +.+ +-+.| .|++-..+-+++.++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--~~~~~~---~-------~~~~~~-~~-i~I-Ks~~EIe~~R~Aa~I~~~a~~a~~~~ir 71 (291)
T PRK12318 7 CWCGSGKKWKHCHYPTKPE--RSLENL---K-------QLYASQ-YD-III-KTPEQIEKIRKACQVTARILDALCEAAK 71 (291)
T ss_pred CccCCCccccccccccCcc--cccccc---c-------hhccCC-Cc-eEE-CCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4567777766678764321 222221 1 222222 22 234 22333 35566666777888888999
Q ss_pred CCCcccchHHHHHHHHHHHcCCC-Cccccc-----ccccccCcccc-CCCcCCCCCCCCcccCCcEEeeCceeeecCccE
Q 006890 471 PNGTCGHTLDILARLPLWKYGLD-YRHGTG-----HGVGSYLNVHE-GPQSISFKPRNVPIHASMTATDEPGYYEDGNFG 543 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~G~~-~~h~~G-----HgvG~~l~vhE-~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~G 543 (627)
| |++-.+|..+++..+.+.|.. .....| ..|. ..... -|+ ..+++.+|++|.++.++.|....| |.
T Consensus 72 p-G~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p~~~~l~~GD~V~vD~g~~~~G-Y~ 144 (291)
T PRK12318 72 E-GVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTIC--TSLNEVICH---GIPNDIPLKNGDIMNIDVSCIVDG-YY 144 (291)
T ss_pred C-CCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceE--eeccceeec---CCCCCCccCCCCEEEEEEeEEECc-EE
Confidence 7 999999998888888877742 101111 1111 11111 111 112567899999999999876543 55
Q ss_pred EEEeEeeEE
Q 006890 544 IRLENVLVV 552 (627)
Q Consensus 544 vriEd~v~V 552 (627)
.-+.-|++|
T Consensus 145 aDitRT~~v 153 (291)
T PRK12318 145 GDCSRMVMI 153 (291)
T ss_pred EEEEEEEEC
Confidence 667777766
|
|
| >PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=84.22 E-value=4 Score=37.02 Aligned_cols=86 Identities=22% Similarity=0.250 Sum_probs=48.6
Q ss_pred CcHHHHHHHHHHHhhccCCcEEEEecCC----------------ccceEEccccCCCCCCcceeEEEEE-EC--CceEEE
Q 006890 166 SSVVEKLKELREKLTNEKARGIIITTLD----------------EVAWLYNIRGTDVPYCPVVHAFAIV-TT--NAAFLY 226 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~d~lll~~~d----------------ni~wLtg~rg~d~~~~P~~~a~~lv-~~--~~~~L~ 226 (627)
..+.+|.++|.+.|.. -..+++.+.+ ++.||||+.-.+ +++++ .. ++.+||
T Consensus 4 ~~~~~RR~~l~~~l~~--~~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~LF 73 (134)
T PF05195_consen 4 EEYAERRKKLAEKLPD--NSIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKSTLF 73 (134)
T ss_dssp HHHHHHHHHHHHHSHS--SEEEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCC--CcEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEEEE
Confidence 4678999999999986 2344444433 588999876544 67777 32 478999
Q ss_pred EeCCCCCHHH--------HHhhhhCCe-EEeeCCchhHHHHHHh
Q 006890 227 VDKRKVSSEV--------ISFLKESGV-EVRDYDAVSSDVVLLQ 261 (627)
Q Consensus 227 v~~~~~~~~~--------~~~l~~~~v-~v~~y~~~~~~~~~~~ 261 (627)
+++.....++ ++..+..|+ ++.+.+++.+.+..+.
T Consensus 74 ~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~ 117 (134)
T PF05195_consen 74 VPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELL 117 (134)
T ss_dssp E----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHH
T ss_pred eCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHH
Confidence 9876644332 222233466 6777777777776665
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A .... |
| >PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=83.51 E-value=0.98 Score=41.02 Aligned_cols=64 Identities=17% Similarity=0.320 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCc-Cc---cCcCccccccccccccccCceEEEE-eC--CceEEEEcch
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYH-QS---EYVSARDKRREFVSGFTGSAGLALI-TM--NEALLWTDGR 69 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h-~s---ey~~~~~~~~~ylTGFtgs~g~~vv-t~--~~a~l~tD~R 69 (627)
.+|.++|.+.|.+. .++||++.++. .| +|.=-.+.+.+||||+.-..+++|+ .. ++..||++.+
T Consensus 7 ~~RR~~l~~~l~~~----~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~ 77 (134)
T PF05195_consen 7 AERRKKLAEKLPDN----SIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPK 77 (134)
T ss_dssp HHHHHHHHHHSHSS----EEEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE---
T ss_pred HHHHHHHHHhcCCC----cEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCC
Confidence 46888888888864 45666655443 22 5666667889999999988888888 22 3688888643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A .... |
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
Probab=82.72 E-value=10 Score=41.75 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=55.7
Q ss_pred CCHHHHHHHH----HHHHHHHHHHhccCCCCcccchHHHHHHH----HHHHcCC----CCcccccccccccCccccCCCc
Q 006890 447 PSAHEKACYT----AVLKGHIALGNAVFPNGTCGHTLDILARL----PLWKYGL----DYRHGTGHGVGSYLNVHEGPQS 514 (627)
Q Consensus 447 p~~e~~~~y~----~v~~~~~~~~~~~~p~G~~~~~l~~~a~~----~l~~~G~----~~~h~~GHgvG~~l~vhE~P~~ 514 (627)
-++++.+.|. .+.++...+...++| |++-.+|...... .+.+.|. .|+. +=++.+. ..|-.|..
T Consensus 153 ~s~~EI~~~R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt--~vS~N~~-aaH~tP~~ 228 (470)
T PTZ00053 153 LSEEQYQDLRRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT--GCSLNHC-AAHYTPNT 228 (470)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc--eeecCcc-ccCCCCCC
Confidence 4555544444 444455567777887 9998888775544 4444444 2322 2122211 12333331
Q ss_pred CCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 515 ISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 515 ~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+ ++.+|+.|.++.|.-|....|. -+=+.-|+++
T Consensus 229 ---g-d~~vLk~GDvVkID~G~~vdGY-iaD~ArTv~v 261 (470)
T PTZ00053 229 ---G-DKTVLTYDDVCKLDFGTHVNGR-IIDCAFTVAF 261 (470)
T ss_pred ---C-CCcEecCCCeEEEEEeEEECCE-EEeEEEEEEe
Confidence 1 3578999999999999877653 3334455554
|
|
| >KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.38 E-value=18 Score=41.47 Aligned_cols=113 Identities=11% Similarity=0.138 Sum_probs=70.7
Q ss_pred ccccccccCceEEEEeCCceEEEEcchhH---HHHhc--ccc---CcEEEE-Ec-CCC-CCHHHHHHhhCC-CCCEEEEc
Q 006890 43 EFVSGFTGSAGLALITMNEALLWTDGRYF---LQATQ--ELT---GEWKLM-RM-LED-PAVDVWMANNLP-NDAAIGVD 110 (627)
Q Consensus 43 ~ylTGFtgs~g~~vvt~~~a~l~tD~RY~---~qA~~--~~~---~~~~~~-~~-~~~-~~~~~~l~~~l~-~~~~vg~d 110 (627)
-||-|+.-..-++|++++.-+++|-.+=. .++.. +.+ ..+.+. +. .+. ....+-|.+.++ .+++||+=
T Consensus 21 ~WLlGYEfpdTilv~~~~~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ik~~gk~vGvf 100 (960)
T KOG1189|consen 21 TWLLGYEFPDTILVLCKDKIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKAIKSAGKKVGVF 100 (960)
T ss_pred HHHhccccCceEEEEecCcEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHHHHHHHhcCCeeeee
Confidence 48999988777788888887777755432 23211 111 123322 21 221 222233434443 45788875
Q ss_pred C-CCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCcc
Q 006890 111 P-WCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPV 156 (627)
Q Consensus 111 ~-~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i 156 (627)
+ +.++-.+...+...+...+++.+++ +-.+..+|.+|+..|.+.|
T Consensus 101 ~ke~~~G~F~~~W~~~l~~~~fn~vDi-s~~ls~l~avKDd~Ei~~i 146 (960)
T KOG1189|consen 101 AKEKFQGEFMESWNKRLEAGGFNKVDI-SLGLSKLFAVKDDEEIANI 146 (960)
T ss_pred cccccchhHHHHHHHHhhhcCCceeeh-hhhhhhheeeccHHHHHHH
Confidence 4 4566677888888888778888888 6668999999999985544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 627 | ||||
| 3ctz_A | 623 | Structure Of Human Cytosolic X-Prolyl Aminopeptidas | 1e-146 | ||
| 2zsg_A | 359 | Crystal Structure Of X-Pro Aminopeptidase From Ther | 5e-18 | ||
| 3q6d_A | 356 | Xaa-Pro Dipeptidase From Bacillus Anthracis. Length | 2e-15 | ||
| 4fkc_A | 377 | Recombinant Prolidase From Thermococcus Sibiricus L | 4e-14 | ||
| 1wy2_A | 351 | Crystal Structure Of The Prolidase From Pyrococcus | 2e-13 | ||
| 4ege_A | 378 | Crystal Structure Of Dipeptidase Pepe From Mycobact | 1e-12 | ||
| 1pv9_A | 348 | Prolidase From Pyrococcus Furiosus Length = 348 | 4e-12 | ||
| 1wn1_A | 356 | Crystal Structure Of Dipeptiase From Pyrococcus Hor | 1e-11 | ||
| 2bwx_A | 441 | His354ala Escherichia Coli Aminopeptidase P Length | 8e-08 | ||
| 1jaw_A | 440 | Aminopeptidase P From E. Coli Low Ph Form Length = | 3e-07 | ||
| 1m35_A | 440 | Aminopeptidase P From Escherichia Coli Length = 440 | 3e-07 | ||
| 1wl9_A | 440 | Structure Of Aminopeptidase P From E. Coli Length = | 3e-07 | ||
| 2bwv_A | 440 | His361ala Escherichia Coli Aminopeptidase P Length | 7e-07 | ||
| 2bwy_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P Length | 2e-06 | ||
| 2v3z_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P In Comp | 2e-06 | ||
| 2bwt_A | 440 | Asp260ala Escherichia Coli Aminopeptidase P Length | 3e-06 | ||
| 2bwu_A | 440 | Asp271ala Escherichia Coli Aminopeptidase P Length | 3e-06 | ||
| 2bww_A | 440 | His350ala Escherichia Coli Aminopeptidase P Length | 4e-06 | ||
| 2bws_A | 440 | His243ala Escherichia Coli Aminopeptidase P Length | 4e-06 | ||
| 2iw2_A | 494 | Crystal Structure Of Human Prolidase Length = 494 | 2e-05 | ||
| 3ig4_A | 427 | Structure Of A Putative Aminopeptidase P From Bacil | 4e-05 |
| >pdb|3CTZ|A Chain A, Structure Of Human Cytosolic X-Prolyl Aminopeptidase Length = 623 | Back alignment and structure |
|
| >pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 | Back alignment and structure |
|
| >pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 | Back alignment and structure |
|
| >pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 | Back alignment and structure |
|
| >pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 | Back alignment and structure |
|
| >pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 | Back alignment and structure |
|
| >pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 | Back alignment and structure |
|
| >pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 | Back alignment and structure |
|
| >pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 | Back alignment and structure |
|
| >pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 | Back alignment and structure |
|
| >pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 | Back alignment and structure |
|
| >pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 | Back alignment and structure |
|
| >pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
|
| >pdb|2IW2|A Chain A, Crystal Structure Of Human Prolidase Length = 494 | Back alignment and structure |
|
| >pdb|3IG4|A Chain A, Structure Of A Putative Aminopeptidase P From Bacillus Anthracis Length = 427 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Length = 623 | Back alignment and structure |
|---|
Score = 893 bits (2310), Expect = 0.0
Identities = 262/642 (40%), Positives = 379/642 (59%), Gaps = 49/642 (7%)
Query: 2 AEILAALRSLMSSHD---PPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT 58
+E+L LR M + + P+ A ++PS D HQSEY++ D RR FVSGF GSAG A+IT
Sbjct: 7 SELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIIT 66
Query: 59 MNEALLWTDGRYFLQATQELTGEWKLMRML--EDPAVDVWMANNLPNDAAIGVDPWCVSI 116
A +WTDGRYFLQA +++ W LM+M + P + W+ + LP + +GVDP +
Sbjct: 67 EEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPT 126
Query: 117 DTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELR 176
D ++ + L+ NLVDK+W +RP P+ +++ G S +K+ +LR
Sbjct: 127 DYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLR 186
Query: 177 EKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEV 236
K+ ++T LDE+AWL+N+RG+DV + PV ++AI+ L++D ++ +
Sbjct: 187 LKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDAPS 246
Query: 237 I--------SFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYAL 288
+ E ++V Y ++ S++ L AD+ + +W + SYA+
Sbjct: 247 VKEHLLLDLGLEAEYRIQVHPYKSILSELKAL-------CADLSPREKVW-VSDKASYAV 298
Query: 289 YSKLNSD-KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGA 347
+ D + + +P+ +AKA+KN E +G+++AHI+D A+ + WL+K++ +
Sbjct: 299 SETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKG--- 355
Query: 348 SGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHY 407
+TE++ +DK E FR + F LSFPTISS GP AI+HY
Sbjct: 356 -------------------GVTEISAADKAEEFRRQQADFVDLSFPTISSTGPTGAIIHY 396
Query: 408 SPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGN 467
+P ET + + +YL DSGAQY+DGTTD+TRT HF P+A+EK C+T VLKGHIA+
Sbjct: 397 APVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSA 456
Query: 468 AVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHA 526
AVFP GT GH LD AR LW GLDY HGTGHGVGS+LNVHEGP IS+K + P+ A
Sbjct: 457 AVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEA 516
Query: 527 SMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKS 586
M TDEPGYYEDG FGIR+ENV++V TK+NF ++G L+ E +T P Q KMI++ S
Sbjct: 517 GMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDS 576
Query: 587 LTPEEIDWLNAYHSKCRDILAPYLDEAE----LAWLKKATEP 624
LT +E DWLN YH CRD++ L + L WL + T+P
Sbjct: 577 LTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQP 618
|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 3e-44
Identities = 91/391 (23%), Positives = 155/391 (39%), Gaps = 61/391 (15%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
EK++ LR GI++T ++ N GT +++ A D
Sbjct: 5 EKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDF 56
Query: 230 RKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALY 289
R +++++ + Y+ V +++ ++ G + + ++ +Y+ Y
Sbjct: 57 R--------YVEQASKQAVGYEIVQHAGLIID--EVAKQVKELGIQKLGFEQDTLTYSSY 106
Query: 290 SKLNS--DKVLLQQSP-LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYG 346
S D + S + + IK E+ LK+A A I D + I
Sbjct: 107 SAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKEA-----AQIA------DAAFEHILS 155
Query: 347 ASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMH 406
+ G ++E+ VS++LE F K+ SF I + G +A+ H
Sbjct: 156 ---FIRPG-------------VSEIEVSNELE-FFMRKQGATSSSFDIIVASGLRSALPH 198
Query: 407 YSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALG 466
+ ++ D GA Y+ +DITRT G+PS K Y VL+ +
Sbjct: 199 GVA---SEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGV 255
Query: 467 NAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRN-VP 523
N + G G D L R + + G + H TGHG+G L +HE P R+
Sbjct: 256 NGIKA-GLTGREADALTRDYITEKGYGEYFGHSTGHGIG--LEIHEAP---GLAFRSDTV 309
Query: 524 IHASMTATDEPGYYEDGNFGIRLENVLVVTD 554
+ M T EPG Y G G+R+E+ ++VT
Sbjct: 310 LEPGMAVTVEPGIYIPGIGGVRIEDDIIVTS 340
|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 1 MAEILAALRSLMSSHDPPLHALVV-PSEDYHQSEYVSARDKRREFVSGFTGSAGLALITM 59
E + LRS + +++ R +++ FTG+AG+ LI+
Sbjct: 3 AMEKIERLRSAFDEAG--IDGILLTNEHS-------------RRYMANFTGTAGVVLISK 47
Query: 60 NEALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTA 119
A TD RY QA+++ G +++++ +V +G + ++ +
Sbjct: 48 KRAQFITDFRYVEQASKQAVG-YEIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSY 106
Query: 120 QRWERAF 126
+ A
Sbjct: 107 SAHKEAI 113
|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 3e-43
Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 63/395 (15%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYC---PVVHAFAIVTTNAAFLY 226
++ + L + ++ E +I + N Y + +++ N L
Sbjct: 2 DRSERLIQLISEEGIDAFLIMNI------ENSARASSVYFSGFTGSFSIILISENTRLLI 55
Query: 227 VDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSY 286
D R + +E+ EVR+ + L + I + S
Sbjct: 56 TDSR----YTVQAKQETDFEVREVKGGDFI------DVLKKTVNDLKIKTIALEEERVSL 105
Query: 287 ALYSKLNS--DKVLLQQSPLALAK--AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQ 342
+L+ +++S + + +K+ E++ +K+A I ++
Sbjct: 106 SLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQA-----IEIS------ERAFL 154
Query: 343 EIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNA 402
E G +TE ++ LE + KE G++F TI + G +
Sbjct: 155 ETVQ---QIRAG-------------MTEKEIAALLE-YTMRKEGAEGVAFDTIVASGCRS 197
Query: 403 AIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462
A+ H + ++ + + D GA Y++ DITR G+PS K ++ VL+
Sbjct: 198 ALPHGKA---SDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQ 254
Query: 463 IALGNAVFPNGTCGHTLDILARLPLWKYGL-DY-RHGTGHGVGSYLNVHEGPQSISFKPR 520
G G LD +AR + + G ++ H GHG+G L VHEGP + R
Sbjct: 255 ERALKIAKA-GVTGKLLDSVAREFIREKGYGEFFGHSLGHGIG--LEVHEGP---AISFR 308
Query: 521 N-VPIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554
N P+ ++ T EPG Y +G FGIR+E +V+ +
Sbjct: 309 NDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKE 343
|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALL 64
L L+S + A ++ ++ + SGFTGS + LI+ N LL
Sbjct: 4 SERLIQLISEEG--IDAFLI-------MNIENSARASSVYFSGFTGSFSIILISENTRLL 54
Query: 65 WTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWER 124
TD RY +QA QE E + ++ D + N I ++ VS+ +R
Sbjct: 55 ITDSRYTVQAKQETDFEVREVKG-GDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISS 113
Query: 125 AFAKKQQKLVQTSTNLVDK 143
AF + K + + V +
Sbjct: 114 AFGDR--KFIGID-DEVKQ 129
|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 2e-42
Identities = 85/392 (21%), Positives = 146/392 (37%), Gaps = 67/392 (17%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
EK+K++ E + ++I V ++ + ++T +A LYV +
Sbjct: 6 EKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPE 58
Query: 230 RKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALY 289
E +ES + V + + ++G + + +S Y
Sbjct: 59 L----EYEMAKEESNIPVEKFKKMD-----------EFYKALEGIKSLGIE-SSLPYGFI 102
Query: 290 SKLNSDKVLLQQSP----LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIY 345
+L + + + + IK+ E+ ++KA I DK +
Sbjct: 103 EELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKA-----CEIA------DKAVMAAI 151
Query: 346 GASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIM 405
EG E V+ K+E + +F TI + G +A+
Sbjct: 152 E---EITEG-------------KKEREVAAKVE-YLMKMNGAEKPAFDTIIASGYRSALP 194
Query: 406 HYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIAL 465
H + ++ + + D GA YQ +DITRT G P+ +K Y VL+
Sbjct: 195 HGVA---SDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKA 251
Query: 466 GNAVFPNGTCGHTLDILARLPLWKYGL-DY-RHGTGHGVGSYLNVHEGPQSISFKPRN-V 522
+ P G LD +AR + +YG +Y H GHGVG L VHE P +
Sbjct: 252 VESAKP-GITAKELDSIARNIIAEYGYGEYFNHSLGHGVG--LEVHEWP---RVSQYDET 305
Query: 523 PIHASMTATDEPGYYEDGNFGIRLENVLVVTD 554
+ M T EPG Y G+R+E+ +++T
Sbjct: 306 VLREGMVITIEPGIYIPKIGGVRIEDTILITK 337
|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 20/146 (13%), Positives = 53/146 (36%), Gaps = 27/146 (18%)
Query: 1 MAEILAALRSLMSSHDPPLHALVV-PSEDYHQSEYVSARDKRREFVSGFTGSAG-LALIT 58
M E + + M + + A+++ + + ++SG + AG LIT
Sbjct: 4 MNEKVKKIIEFMDKNS--IDAVLIAKNPN-------------VYYISGASPLAGGYILIT 48
Query: 59 MNEALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDT 118
A L+ + A +E + + +++ L ++G++ +
Sbjct: 49 GESATLYVPELEYEMAKEESNIPVEKFKKMDEF------YKALEGIKSLGIES-SLPYGF 101
Query: 119 AQRWERAFAKKQQKLVQTSTNLVDKV 144
+ ++ K+ K V +++ +
Sbjct: 102 IEELKKKANIKEFKKV---DDVIRDM 124
|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 7e-41
Identities = 90/389 (23%), Positives = 150/389 (38%), Gaps = 49/389 (12%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
+L G++IT ++ +L R + A + + + + +
Sbjct: 17 RRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADT---FERLTALVLPASGVPTIVLPR 73
Query: 230 RKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALY 289
+++S S + GV VRD+ L+ PA +D + A
Sbjct: 74 LELASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVTDSMPAL----HLLPL 129
Query: 290 SKLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASG 349
+ +L L + +K E+D L KA A + D+ +
Sbjct: 130 ADALGVLPVLATDVLRQLRMVKEAAEVDALAKA-----GAAI------DRVHARVPA--- 175
Query: 350 YFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSP 409
+ + G TE V+ + E ++F + S GP+ A H+
Sbjct: 176 FLVPG-------------RTEAQVAADIA-EAIVAEGHSAVAFVIVGS-GPHGADPHHGY 220
Query: 410 QSETCAEMDPNSIYLCDSGAQYQDG-TTDITRTFHFGKPSAHEKACYTAVLKGHIALGNA 468
S+ ++ I + D G Y+ G +D TRT+ G PS Y+A+ + A +A
Sbjct: 221 -SDR--KLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDA 277
Query: 469 VFPNGTCGHTLDILARLPLWK--YGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN-VPIH 525
V P G +D AR L + H TGHG+G L VHE P N +P+
Sbjct: 278 VRP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEP---YIVAGNELPLV 331
Query: 526 ASMTATDEPGYYEDGNFGIRLENVLVVTD 554
A M + EPG Y G +G R+E+++VVT+
Sbjct: 332 AGMAFSIEPGIYFPGRWGARIEDIVVVTE 360
|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 87/387 (22%), Positives = 142/387 (36%), Gaps = 51/387 (13%)
Query: 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKR 230
+L++ L G +I+ + +L +R +V + A+
Sbjct: 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVG--ERLAILAVSAEGDYRFLAPSL 59
Query: 231 KVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYS 290
D + + + + + D + AD
Sbjct: 60 ----YENVVNNFPATFWHDGENPYAKLREILEELGISKGRILIEDTMRAD----WLIGIM 111
Query: 291 KLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGY 350
KL S + + IK+ E+ ++ A + I DK +EI +
Sbjct: 112 KLGKFTFQPLSSLIKELRMIKDKEEVKMMEHA-----SRIA------DKVFEEILT---W 157
Query: 351 FLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQ 410
L G + E ++ K+E +E G++F I + G NAA H+ P
Sbjct: 158 DLIG-------------MKERELALKIELL--IRELSDGIAFEPIVASGENAANPHHEP- 201
Query: 411 SETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVF 470
E ++ I + D GA+++ +DITRT G+ Y V + AV
Sbjct: 202 GER--KIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVR 259
Query: 471 PNGTCGHTLDILARLPLWKYGL-DY-RHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHAS 527
G +D AR + K G +Y H TGHG+G L+VHE P P V +
Sbjct: 260 E-GIKAKDVDSRAREVISKAGYGEYFIHRTGHGLG--LDVHEEP---YIGPDGEVILKNG 313
Query: 528 MTATDEPGYYEDGNFGIRLENVLVVTD 554
MT T EPG Y G G+R+E+ +VV +
Sbjct: 314 MTFTIEPGIYVPGLGGVRIEDDIVVDE 340
|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-35
Identities = 63/405 (15%), Positives = 111/405 (27%), Gaps = 67/405 (16%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPV-VHAFAIVTTNAAFLYVD 228
+ LR L E I T+ + + +D YC +VT +
Sbjct: 25 NRQARLRAHLAAENIDAAIFTSYHNINYY-----SDFLYCSFGRPYALVVTEDDVISISA 79
Query: 229 KRKVSSEVISFLKES-GVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYA 287
+ + + G + Y D Q P + I + + +
Sbjct: 80 NI----DGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALP-----KARRIGIEHDHLNLQ 130
Query: 288 LYSKLN---SDKVLLQQSPLALA-KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQE 343
KL D L+ + + + IK+ E ++ A I D
Sbjct: 131 NRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHG-----ARIA------DIGGAA 179
Query: 344 IYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESF--RASKEHFRG---LSFPTISSV 398
+ EA + + E V+ RA + F + T
Sbjct: 180 VV---------EALGD----Q---VPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQS 223
Query: 399 GPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAV 458
G N H T +++ I + T + RT S +
Sbjct: 224 GINTDGAHNPV---TTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVN 280
Query: 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DY-RHGTGHGVGSYLNVHEGP--QS 514
++ H A + P C + K+ + Y G GH G H
Sbjct: 281 VEVHEAGLKLIKPGARCSD-IARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAG 337
Query: 515 ISFKPRN-VPIHASMTATDEPGYYED----GNFGIRLENVLVVTD 554
+ + + M + EP G G R ++L+V +
Sbjct: 338 LELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVNE 382
|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 22/149 (14%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFT----GSAGLAL 56
A A LR+ +++ + + A + YH Y S F G +
Sbjct: 23 YANRQARLRAHLAAEN--IDAAIF--TSYHNINYYS----------DFLYCSFGRPYALV 68
Query: 57 ITMNEALLWTDGRYFLQATQELTGEWKLMRM-LEDPAVDVWMANNLPNDAAIGVDPWCVS 115
+T ++ + + Q + G ++ + + LP IG++ ++
Sbjct: 69 VTEDDVISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLN 128
Query: 116 IDTAQRWERAFAKKQQKLVQTSTNLVDKV 144
+ + + + V ++
Sbjct: 129 LQNRDKLAARYPDAELVDV---AAACMRM 154
|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-31
Identities = 51/405 (12%), Positives = 101/405 (24%), Gaps = 68/405 (16%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFA-IVTTNAAFLYVD 228
+ LR + ++ T+ + + + YC +A ++ A
Sbjct: 26 RRZBRLRAWMAKSBIDAVLFTSYHNINYY-----SGWLYCYFGRKYAZVIBZVKAVTISK 80
Query: 229 KRKVSSEVISFLKES-GVEVRDYDAVSSDVVLLQSNQLNPPADVQG--SDLIWADPNSCS 285
+ + S G + D D +L A G D + B
Sbjct: 81 GI----DGGMPWRRSFGBNIVYTDW-KRDNFYSAVKKLVKGAKZIGIEHDHVTLB----H 131
Query: 286 YALYSKLNSDKVLLQQSPLALA-KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEI 344
K + + + IK+ E B +++ A I D
Sbjct: 132 RRZLZKALPGTEFVDVGZPVMWZRVIKSSEEZBLIRZG-----ARIS------DIGGAAT 180
Query: 345 YGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSV------ 398
A E V+ +Z R + +
Sbjct: 181 A---------AAISAGV-------PEYEVAIATT-BAMVRZIARBFPYVELMDTWIWFQS 223
Query: 399 GPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAV 458
G N H T ++ I + T + RT + +
Sbjct: 224 GINTDGAHNPV---TBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKN 280
Query: 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGP--QS 514
H + P C + ++ L G GH G + H
Sbjct: 281 TAVHRRGLZLIKPGARCKD-IASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAG 337
Query: 515 ISFKPRN-VPIHASMTATDEPGYYED----GNFGIRLENVLVVTD 554
+ + + M + EP + G G R ++LV+ +
Sbjct: 338 VELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYREHDILVIKE 382
|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M LR+ M+ B + A++ YH Y S ++ + G +I
Sbjct: 24 MTRRZBRLRAWMAKSB--IDAVLF--TSYHNINYYSG------WLYCYFGRKYAZVIBZV 73
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
+A+ + G + G+ + + + + IG++ V++B +
Sbjct: 74 KAVTISKGIDGGMPWRRSFGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRR 133
Query: 121 RWERAF 126
Z+A
Sbjct: 134 ZLZKAL 139
|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 5e-29
Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 23/267 (8%)
Query: 302 SPLALAKAIKNPVELDGLKKA-HIRDGA--AIVQYIIWLDKQMQEIYGASGYFLEGEATK 358
L+ +K+ E L + D + ++ + +I + L +
Sbjct: 169 LGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKI---TNAKLSDKIEN 225
Query: 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIM-HYSPQSETCAEM 417
+ +K +S ++ I G + ++
Sbjct: 226 KIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGN 285
Query: 418 DPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGH 477
L G +Y + ++ITRTF PS Y +L + + G
Sbjct: 286 G---CILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKPGRTPK 341
Query: 478 TLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDE 533
+ + K + G +G L + ++ K I
Sbjct: 342 EVYESVIEYIEKTKPELVPNFTKNIGSLIG--LEFRDSNFILNVKNDYRKIQRGDCFNIS 399
Query: 534 PGYYE------DGNFGIRLENVLVVTD 554
G+ N+ ++L + + +
Sbjct: 400 FGFNNLKDSQSANNYALQLADTVQIPL 426
|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 6e-27
Identities = 54/427 (12%), Positives = 123/427 (28%), Gaps = 62/427 (14%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPY------------CPVVHAFAI 217
++L L NE+ + D + PY +
Sbjct: 15 KRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPSTLIL 74
Query: 218 VTTNAAFLYVDKRK--------------VSSEVISFLKESGVEVRDYDAVSSDVVLLQSN 263
+ + + K ++ K++ + ++ + +
Sbjct: 75 LEKHRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKK 134
Query: 264 QLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSP-LALAKAIKNPVELDGLKKA 322
P D I + +++ + S+ L+ S LA AIK+ EL +K A
Sbjct: 135 VGVFPKDKTQGKFI-----NEWDSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGA 189
Query: 323 -HIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381
+ + ++ + + + + + T S KL
Sbjct: 190 SRVSVAV----MSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDID 245
Query: 382 ASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRT 441
+ + I G + + + + D + LC G +Y+ +++ RT
Sbjct: 246 LDQL---EWCYTPIIQSGGSYDLKPSAITDDRNLHGD---VVLCSLGFRYKSYCSNVGRT 299
Query: 442 FHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HG 497
+ F P + ++ Y+ ++ L G + + D
Sbjct: 300 YLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRN 357
Query: 498 TGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGY----------YEDGNFGIRLE 547
G G+G + E ++ K + A MT G+ + + + L
Sbjct: 358 LGAGIG--IEFRESSLLVNAK-NPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLI 414
Query: 548 NVLVVTD 554
+ + +T
Sbjct: 415 DTIQITR 421
|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-25
Identities = 55/404 (13%), Positives = 119/404 (29%), Gaps = 52/404 (12%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
+ + L + + G+++ + + + + ++ + + D
Sbjct: 81 FRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDY 140
Query: 230 RKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLI--------WADP 281
+ +S +S E R + + + + L+
Sbjct: 141 K--NSPFLSEFNPLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAV 198
Query: 282 NSCSYALYSKLNSD--KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDK 339
+ L + +++ + A+++K P E+ ++ A +
Sbjct: 199 DKVMLHGLRALQAQGFEIMDGEEVTEKARSVKGPDEIRAMRCA-----------SHACEV 247
Query: 340 QMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVG 399
++++ + + K G E + L S + + G
Sbjct: 248 AVRKME---------DFARSKVGDGVT--CENDIWAILHSEN--VRRGGEWIETRLLASG 294
Query: 400 PNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGT-TDITRTFHFGKPSAHEKACYTAV 458
P + C N I D+ G TDI+R++ G Y
Sbjct: 295 PRSNPWFQECGPRVCQ---RNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQ 351
Query: 459 LKG-HIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISF 517
HI + G L + K+ HGVG E P +++
Sbjct: 352 HGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQKYGCLMHGVGL---CDEWP-LVAY 407
Query: 518 KPRNV------PIHASMTATDEPG-YYEDGNFGIRLENVLVVTD 554
V P+ MT E E G+F I+LE+ +++T+
Sbjct: 408 PDHAVAGAYDYPLEPGMTLCVEALISEEGGDFSIKLEDQVLITE 451
|
| >3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae} Length = 135 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-24
Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 21/144 (14%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
+ AL + +++ + A++V ++SGFTGS +I +
Sbjct: 10 FLQRRRALSAQLAAKR--IDAMLVTH------------LTHIRYLSGFTGSNAALIINKD 55
Query: 61 E-ALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTA 119
A + TDGRY Q +++ + L + +++ +G + +S+
Sbjct: 56 LSARISTDGRYITQIAEQVPD----IESLMARNCAPALLSDINGPKRVGFEADYLSVSQC 111
Query: 120 QRWERAFAKKQQKLVQTSTNLVDK 143
+ ++ + L+ + ++K
Sbjct: 112 EELRKSAGSDVE-LIPVT-GAIEK 133
|
| >3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} Length = 132 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 7e-22
Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 22/144 (15%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
+ + L M+ L AL+V +++GF+G+A LIT
Sbjct: 8 LEQRLGHCLRQMAEKG--LEALLVTH------------LTNSYYLTGFSGTAATVLITAK 53
Query: 61 EALLWTDGRYFLQATQELTG-EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTA 119
+L TD RY L A + G + R ++ A+ + +G + VS
Sbjct: 54 RRVLITDSRYTLLAKASVEGFDIIESRTPLKVVAELLEADQI---DCLGFEDQ-VSFSFY 109
Query: 120 QRWERAFAKKQQKLVQTSTNLVDK 143
Q + + L+ S V+
Sbjct: 110 QAMQAELSGIT--LLAQS-GFVEH 130
|
| >3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} Length = 132 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 6e-04
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 8/61 (13%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
++L ++ + +++T L +L GT A ++T L D
Sbjct: 10 QRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITDS 61
Query: 230 R 230
R
Sbjct: 62 R 62
|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 3e-21
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 24/181 (13%)
Query: 388 RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GK 446
+ +F TI + G NA ++HY D + L D GAQ DI+ TF G
Sbjct: 221 KHHAFNTILASGKNATVLHYEDNDAQIQNGD---LVLLDLGAQKDYYNADISYTFPANGT 277
Query: 447 PSAHEKACYTAVLKGHIALGNAVFPNGTCG--HTL------DILARLPLWKYGLDYR--- 495
S+ +K Y VL + P + + + L + +
Sbjct: 278 FSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYY 337
Query: 496 -HGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPG-YYEDGNFGIRLENVLVVT 553
HG H +G L+ H+ ++ + M T EPG Y E+ + GIR+E+ ++VT
Sbjct: 338 YHGVSHFLG--LDTHDVGTY-----KDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVT 390
Query: 554 D 554
Sbjct: 391 K 391
|
| >3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} Length = 131 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-18
Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 20/143 (13%)
Query: 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMN 60
M L + + L AL+V +++ F G+ IT N
Sbjct: 4 MQRRLERFDAKLVQSG--LDALLVTG------------QNNIYYLTDFWGTNATVFITKN 49
Query: 61 EALLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQ 120
L TD RY L A Q + G + + ++ + IG D VS Q
Sbjct: 50 RRLFLTDSRYTLIAKQSVHGFDIIESKDPLKDIVKFVEVD--KLETIGFDNQ-VSFAYYQ 106
Query: 121 RWERAFAKKQQKLVQTSTNLVDK 143
+ F L + N +++
Sbjct: 107 ALQAIFEGY--TLSPQT-NFMEE 126
|
| >3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} Length = 131 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 7e-04
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDK 229
+L+ KL +++T + + +L + GT+ A +T N D
Sbjct: 6 RRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDS 57
Query: 230 R 230
R
Sbjct: 58 R 58
|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 2e-17
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 388 RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GK 446
R S+ TI G N I+HY+ E EM + L D+G +Y+ DITRTF GK
Sbjct: 225 RYPSYNTIVGSGENGCILHYT---ENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGK 281
Query: 447 PSAHEKACYTAVLKGHIALGNAVFP-------NGTCGHTL-DILARLPLWKYGLD----- 493
+ ++ Y VL+ P G + L +L + K +D
Sbjct: 282 FTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQ 341
Query: 494 ------YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY--EDG----- 540
+ HG H +G L+VH+ + R+ + M T PG Y D
Sbjct: 342 NAHRPFFMHGLSHWLG--LDVHDVGV--YGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQ 397
Query: 541 --NFGIRLENVLVVTD 554
GIR+E+ +V+T+
Sbjct: 398 YRGIGIRIEDDIVITE 413
|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 3e-15
Identities = 61/264 (23%), Positives = 96/264 (36%), Gaps = 72/264 (27%)
Query: 377 LESFRASKEHFRGLSFPTISSVGPNAAIMHYS-PQSETCAEMDPNSIYLCDSGAQYQDGT 435
E + S+ R S+ I G N+A++HY + + + L D G +Y
Sbjct: 227 FEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFA 286
Query: 436 TDITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGT--------CGHTLDILARLP 486
+DIT +F GK +A +KA Y AVL+ A+ A+ P L+ LA +
Sbjct: 287 SDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMG 346
Query: 487 LWKYGLD-----------YRHGTGHGVGSYLNVH-------EGPQSISFKPRNV----PI 524
+ +D HG GH +G ++VH + R++ +
Sbjct: 347 ILSGSVDAMVQAHLGAVFMPHGLGHFLG--IDVHDVGGYPEGVERIDEPGLRSLRTARHL 404
Query: 525 HASMTATDEPGYY--------------------ED------GNFGIRLENVLVVTDANTK 558
M T EPG Y + G G+R+E +VVT
Sbjct: 405 QPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVT----- 459
Query: 559 FNFGDKGYLSFEHITWAPYQIKMI 582
D G E +T P ++ I
Sbjct: 460 ----DSGI---ELLTCVPRTVEEI 476
|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 47/231 (20%), Positives = 78/231 (33%), Gaps = 61/231 (26%)
Query: 381 RASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITR 440
A++ + I ++ N AI+HY+ + +L D+GA + DITR
Sbjct: 201 LATQHSENDNPYGNIVALNENCAILHYTHFD--RVAPATHRSFLIDAGANFNGYAADITR 258
Query: 441 TFHF-GKPSAHEKACYTAVLKGHIALGNAVFP--------NGTCGHTLDILARLPLWKYG 491
T+ F G+ + + IAL N + P L+ +
Sbjct: 259 TYDFTGEGEF--AELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVAQTLSDFNIVDLS 316
Query: 492 LD-----------YRHGTGH--G-----VGSYLNVHEG-----PQSISFKPRNVPIHASM 528
D + HG GH G VG ++ +G P+ F I A+
Sbjct: 317 ADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQ 376
Query: 529 TATDEPGYY------------EDGNF-------------GIRLENVLVVTD 554
T EPG Y ++ GIR+E+ ++V +
Sbjct: 377 VFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHE 427
|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-14
Identities = 49/234 (20%), Positives = 79/234 (33%), Gaps = 64/234 (27%)
Query: 381 RASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITR 440
AS++ + + +I ++ +A+I+HY + +L D+GA Y DITR
Sbjct: 201 AASRQGDNDVPYTSIVALNEHASILHYMQCDT--VAPKESRSFLIDAGANYHGYAADITR 258
Query: 441 TF----HFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCG--HTL------DILARLPLW 488
T+ SA + AV K + L +++ P H L IL +
Sbjct: 259 TYAQEGVH--NSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMV 316
Query: 489 KYGLD-----------YRHGTGH--G-----VGSYLNVHEG-PQSISFKPRNV----PIH 525
+ HG GH G VG +N G P+ + +
Sbjct: 317 NLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVE 376
Query: 526 ASMTATDEPGYY------------EDGNF-------------GIRLENVLVVTD 554
A T EPG Y + GIR+E+ ++V
Sbjct: 377 ARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHR 430
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 3e-10
Identities = 70/493 (14%), Positives = 140/493 (28%), Gaps = 164/493 (33%)
Query: 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEA 62
+L L+ L+ DP + S + S + + R L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKL-RIHSIQAELRRL---------LKSKPYENC 246
Query: 63 LLWTDGRYFLQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRW 122
LL +V +
Sbjct: 247 LLVLL--------------------------NVQ-------------NAKAW-------- 259
Query: 123 ERAFAKKQQKLVQT-STNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTN 181
AF + L+ T + D + T ++ L LT
Sbjct: 260 -NAFNLSCKILLTTRFKQVTDFL----SAATTTHIS--------------LDHHSMTLTP 300
Query: 182 EKARGIIITTLDEVAWLYNIRGTDVPY--CPVVHAFAI----------VTTNAAFLYVDK 229
++ + +++ +L + R D+P + + + T + +V+
Sbjct: 301 DEVKSLLLK------YL-DCRPQDLPREVLT-TNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 230 RKVSSEVISFLKE-SGVEVRD-YDAVSSDVVLLQSNQLNPPADVQGSDLIWAD-PNSCSY 286
K+++ + S L E R +D + + + + P + LIW D S
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFD----RLSVFPPS-AHIPTILLS--LIWFDVIKSDVM 405
Query: 287 ALYSKLNSDKVLLQQSPLALAKAI-----KNPVELDGLKKAHIRDGAAIVQYII------ 335
+ +KL+ L+++ P +I + V+L+ H + Y I
Sbjct: 406 VVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRS---IVDHYNIPKTFDS 461
Query: 336 ------WLDKQMQEIYGASGYFLEGEATKEK------------------KHSGTVKLTEV 371
+LD Q Y G+ L+ E+ +H T
Sbjct: 462 DDLIPPYLD---QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518
Query: 372 TVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSE--------TC----AEMDP 419
++ + L+ + K + + P + AI+ + P+ E T A M
Sbjct: 519 SILNTLQQLKFYKPYIC-DNDPKYERL--VNAILDFLPKIEENLICSKYTDLLRIALMAE 575
Query: 420 NSIYLCDSGAQYQ 432
+ ++ Q Q
Sbjct: 576 DEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 4e-08
Identities = 102/704 (14%), Positives = 184/704 (26%), Gaps = 248/704 (35%)
Query: 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYV--SARDKRREFVSGFTGSA-------- 52
++ +S++S + H ++ + + + K+ E V F
Sbjct: 37 DVQDMPKSILSKEEID-HIIMSKDAV-SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94
Query: 53 -----------GLALITMNEAL--LWTDGR----YFLQATQELTGEWKLMRMLE--DPAV 93
+ E L+ D + Y + Q KL + L PA
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY---LKLRQALLELRPAK 151
Query: 94 DV-----------WMANNLPNDAAIGVDP-----WCVSIDTAQRWERAFAKKQQKLVQTS 137
+V W+A ++ + W +++ + QKL+
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-LNLKNCNS-PETVLEMLQKLL--- 206
Query: 138 TNLVDKVWKNRP-PVETYPVTVQQIEFAGSSVVEKLKELREKLTNEK-ARGIIITTLDEV 195
+D W +R + + I+ ELR L ++ +++ L V
Sbjct: 207 -YQIDPNWTSRSDHSSNIKLRIHSIQ----------AELRRLLKSKPYENCLLV--LLNV 253
Query: 196 AWLYNIRGTDVPYCPVVHAFAI-----VTT----NAAFLYVDKRKVSSEVISFLKESGVE 246
N + +AF + +TT FL S +
Sbjct: 254 -Q--NAK--------AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD---HHSMTLT 299
Query: 247 VRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLAL 306
+ ++ + + L P + + P L
Sbjct: 300 PDEVKSLLLKYLDCRPQDL-PREVLTTN----------------------------PRRL 330
Query: 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTV 366
+ + IRDG A W KH
Sbjct: 331 S-----------IIAESIRDGLATWDN--W------------------------KHVNCD 353
Query: 367 KLTEVTVSDKLESFRAS--KEHFRGLS-FPTISSVGPNAAI------MHYSPQSETCAEM 417
KLT + L + ++ F LS FP P+A I + + ++ +
Sbjct: 354 KLTT-IIESSLNVLEPAEYRKMFDRLSVFP------PSAHIPTILLSLIWFDVIKSDVMV 406
Query: 418 DPNSIYLCDSGA---QYQDGTT---DITRTFHF---GKPSAHEK--ACYTAVLKGHIALG 466
N L Q ++ T I + + H Y
Sbjct: 407 VVNK--LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN---------- 454
Query: 467 NAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHA 526
P L +P + Y H +G +L E P+ ++
Sbjct: 455 ---IPKTFDSDDL-----IPPYLDQYFYSH-----IGHHLKNIEHPERMTLFRM------ 495
Query: 527 SMTATDEPGYYEDGNF---GIRLENVLVVTDANTKFNFGD-KGYLSFEHIT-WAPYQIKM 581
+ D F IR ++ + K Y +I P ++
Sbjct: 496 ---------VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK--PYICDNDPKYERL 544
Query: 582 IN--LKSL-TPEEIDWLNAYHSKCRDIL--------APYLDEAE 614
+N L L EE N SK D+L +EA
Sbjct: 545 VNAILDFLPKIEE----NLICSKYTDLLRIALMAEDEAIFEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 7e-07
Identities = 79/547 (14%), Positives = 150/547 (27%), Gaps = 182/547 (33%)
Query: 174 ELREKLTNEKARGII-----ITTLDEVAWLYNIRGTDVPYCPVVHAF--AIVTTNAAFLY 226
+ L+ E+ II ++ + W + ++ V F ++ N FL
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-----VQKFVEEVLRINYKFLM 95
Query: 227 VDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSY 286
K S + +E RD L NQ+ +V
Sbjct: 96 -SPIKTEQRQPSMMTRMYIEQRD--------RLYNDNQVFAKYNVSRLQPYLKLRQ---- 142
Query: 287 ALYSKLNSDKVLLQ------QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLD-- 338
AL + VL+ ++ +AL V L + + I WL+
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALD------VCLSYKVQCKMDFK------IFWLNLK 190
Query: 339 ---------KQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389
+ +Q++ Y ++ T HS +KL ++ +L SK +
Sbjct: 191 NCNSPETVLEMLQKLL----YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 390 L-------------SF------------PTISSVGPNAAIMHYS----------PQSET- 413
L +F ++ A H S + ++
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 414 ---CAEMD------------PNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHE--KACY- 455
+ P + + +DG H ++
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 456 ---TAVLKGH-IALGNAVFPNGTCGH-TLDILARLPLW----------------KYGLDY 494
A + L +VFP H +L+ +W KY L
Sbjct: 365 VLEPAEYRKMFDRL--SVFPPSA--HIPTILLSL--IWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 495 RHGTGHGVGSYLNVHEGPQSISFKPRNVP-IHASMTATDEPGYYEDGNFGIRLENVLVVT 553
+ S +++ + K N +H S+ +Y N+
Sbjct: 419 K----QPKESTISIPSIYLELKVKLENEYALHRSIVD-----HY----------NIPKTF 459
Query: 554 DANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDEA 613
D++ Y + HI + +K I PE + R + +LD
Sbjct: 460 DSDDLIPPYLDQYF-YSHI---GHHLKNIEH----PERMTLF-------RMV---FLD-- 499
Query: 614 ELAWLKK 620
+L++
Sbjct: 500 -FRFLEQ 505
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 627 | |||
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 100.0 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 100.0 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 100.0 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 100.0 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 100.0 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 100.0 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 100.0 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 100.0 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 100.0 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 100.0 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 100.0 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 100.0 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 100.0 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 100.0 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 100.0 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 100.0 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 100.0 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 100.0 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 100.0 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 100.0 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 100.0 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 100.0 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 100.0 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 100.0 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 100.0 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 100.0 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 100.0 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 100.0 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 100.0 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 100.0 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 100.0 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 99.97 | |
| 3qoc_A | 135 | Putative metallopeptidase; MCSG, PSI-2, structural | 99.9 | |
| 3il0_A | 131 | Aminopeptidase P; XAA-Pro aminopeptidase; structur | 99.89 | |
| 3ovk_A | 132 | Aminopeptidase P, XAA-Pro dipeptidase; structural | 99.87 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 99.86 | |
| 3pn9_A | 138 | Proline dipeptidase; structural genomics, PSI-2, p | 99.83 | |
| 3i7m_A | 140 | XAA-Pro dipeptidase; structural genomics, APC64794 | 99.83 | |
| 3ooo_A | 132 | Proline dipeptidase; structural genomics, PSI-2, p | 99.82 | |
| 3o5v_A | 132 | X-Pro dipeptidase; creatinase, N-terminal, PSI, MC | 99.81 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 99.79 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 99.77 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 99.73 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 99.72 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 99.67 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 99.66 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 99.57 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 99.51 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 99.47 | |
| 4b6a_t | 614 | Probable metalloprotease ARX1; large ribosomal sub | 99.45 | |
| 3il0_A | 131 | Aminopeptidase P; XAA-Pro aminopeptidase; structur | 99.45 | |
| 3pn9_A | 138 | Proline dipeptidase; structural genomics, PSI-2, p | 99.44 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 99.42 | |
| 3qoc_A | 135 | Putative metallopeptidase; MCSG, PSI-2, structural | 99.24 | |
| 3ovk_A | 132 | Aminopeptidase P, XAA-Pro dipeptidase; structural | 99.22 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 99.17 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 99.15 | |
| 3o5v_A | 132 | X-Pro dipeptidase; creatinase, N-terminal, PSI, MC | 99.14 | |
| 3ooo_A | 132 | Proline dipeptidase; structural genomics, PSI-2, p | 99.12 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 99.09 | |
| 3i7m_A | 140 | XAA-Pro dipeptidase; structural genomics, APC64794 | 99.0 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 97.96 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 97.52 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 97.29 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 94.54 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 92.39 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 91.21 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 88.64 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 88.18 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 87.76 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 87.24 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 86.78 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 84.71 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 84.45 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 83.99 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 82.65 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 82.53 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 82.39 |
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-124 Score=1056.95 Aligned_cols=593 Identities=44% Similarity=0.818 Sum_probs=544.6
Q ss_pred HHHHHHHHHHHhcCCCC-----ceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPP-----LHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~-----~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~ 76 (627)
.+||++||++|+++ + +||||||+.|+|||||||++++|++||||||||+|++|||.++++|||||||++||++
T Consensus 7 ~~Rl~~LR~~m~~~--~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSaG~~vVt~~~a~l~tDgRY~~QA~~ 84 (623)
T 3ctz_A 7 SELLRQLRQAMRNS--EYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQAAK 84 (623)
T ss_dssp HHHHHHHHHHTTCT--TTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHhc--CCCCCceeEEEECCCCccccccccchhccceeccCcCCCceEEEEecCeeEEEECcHHHHHHHH
Confidence 57999999999986 5 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcEEEEEcCC--CCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCC
Q 006890 77 ELTGEWKLMRMLE--DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETY 154 (627)
Q Consensus 77 ~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~ 154 (627)
|++.+|++++.+. .+.+.+||.+++..+++||||++++|++.+++|++.++..+++++++..|+||.+|.+||..+.+
T Consensus 85 ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~~~~lvd~iw~~Rp~k~~~ 164 (623)
T 3ctz_A 85 QMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPERPCK 164 (623)
T ss_dssp HBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEECSSCHHHHHCTTCCCCCCC
T ss_pred hcCCceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEecCCCcHHHHhhcCCCCCch
Confidence 9976799998774 47788999999998999999999999999999999998777899998569999999999999999
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCH
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSS 234 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~ 234 (627)
+++.++.+|+|+++.+|++++|+.|+++++|++++++++|++||+|++|+|++|+|+|++|++|+.++++||++..++..
T Consensus 165 e~~~~~~~~ag~~~~~rl~~lr~~m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~ 244 (623)
T 3ctz_A 165 PLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDA 244 (623)
T ss_dssp CCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGS
T ss_pred hhhhcchhhcChhHHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999877654
Q ss_pred -HHHHhhh-------hCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCC-eEEecCCccc
Q 006890 235 -EVISFLK-------ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD-KVLLQQSPLA 305 (627)
Q Consensus 235 -~~~~~l~-------~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~-~~~~~~~~i~ 305 (627)
.+++++. ..++++.+|.++.+.+..+... . ...++|++|.. .++.+++.|+.. ++++..+++.
T Consensus 245 ~~~~~~l~~~~~~p~~~~v~v~~y~~~~~~l~~l~~~-~------~~~~~i~id~~-~~~~l~~~l~~~~~~v~~~~~i~ 316 (623)
T 3ctz_A 245 PSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCAD-L------SPREKVWVSDK-ASYAVSETIPKDHRCCMPYTPIC 316 (623)
T ss_dssp HHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHT-C------CTTCEEEEETT-SBHHHHHHSCGGGEEEESSCHHH
T ss_pred HHHHHHHhhccccccCCceEEEEhHHHHHHHHHHHhc-c------cCCeEEEECch-hhHHHHHhccccceEEecccHHH
Confidence 5666663 3568999999988877766421 0 02468999987 568999999765 6889999999
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|+|||+.||++||+|+++++.|+.++++|+++.+ . ++|+||.++++.++.++....
T Consensus 317 ~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~---------------------~~g~tE~el~~~l~~~~~~~~ 374 (623)
T 3ctz_A 317 IAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEV-P---------------------KGGVTEISAADKAEEFRRQQA 374 (623)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-G---------------------GTCCBHHHHHHHHHHHHHTST
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------------------CCCCcHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999987654 1 579999999999998876556
Q ss_pred CCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHH
Q 006890 386 HFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIAL 465 (627)
Q Consensus 386 g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~ 465 (627)
|+.+.+|+||+++|+|++++||.|+.+++++|++||+|++|+|++|.||++|+||||++|+||++|+++|+.|+++++++
T Consensus 375 g~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~ 454 (623)
T 3ctz_A 375 DFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAV 454 (623)
T ss_dssp TEEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 77789999999999999999999986667999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCCC-CCCCcccCCcEEeeCceeeecCccEE
Q 006890 466 GNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFK-PRNVPIHASMTATDEPGYYEDGNFGI 544 (627)
Q Consensus 466 ~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~-~~~~~l~~Gmv~siEPg~y~~~~~Gv 544 (627)
++++||.|+++.+||.++|+++|+.|++|.|++|||||+||++||+|..++.. .++.+|+||||||+|||+|.+|.+||
T Consensus 455 ~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~Gi 534 (623)
T 3ctz_A 455 SAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGI 534 (623)
T ss_dssp HTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEE
T ss_pred HHHhCcCCCcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEE
Confidence 99999779999999999999999999999999999999999999999855542 15678999999999999999999999
Q ss_pred EEeEeeEEecCCcccccCCcceeeeecccccccccccccccCCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHH
Q 006890 545 RLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDE----AELAWLKK 620 (627)
Q Consensus 545 riEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~~~l~~~e~~~ln~y~~~~~~~~~~~l~~----~~~~wl~~ 620 (627)
||||+|+||+++...+|++++||+||+||.+|+++++|+.+|||++|++|||+||++|+++|+|+|++ ++++||++
T Consensus 535 RiEd~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wl~~ 614 (623)
T 3ctz_A 535 RIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIR 614 (623)
T ss_dssp ECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred EEeeEEEEecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHHHHHHHhHhhCCCCcHHHHHHHHH
Confidence 99999999998766788889999999999999999999999999999999999999999999999985 67999999
Q ss_pred ccccCC
Q 006890 621 ATEPAS 626 (627)
Q Consensus 621 ~~~~~~ 626 (627)
+|+||+
T Consensus 615 ~t~~~~ 620 (623)
T 3ctz_A 615 ETQPIS 620 (623)
T ss_dssp TTCCC-
T ss_pred HhHhhc
Confidence 999985
|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-66 Score=549.71 Aligned_cols=347 Identities=27% Similarity=0.398 Sum_probs=305.6
Q ss_pred CcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCe
Q 006890 166 SSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGV 245 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v 245 (627)
+++.+|++++|+.|+++++|++++++++|++||||++|++ ++++|+.+++.|+++.+...+. +..+ .++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~r~~~~a-~~~~--~~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDFRYVEQA-SKQA--VGY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECGGGHHHH-HHHS--TTS
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEEChhhHHHH-HhhC--CCC
Confidence 3688999999999999999999999999999999999876 7899999999999988765443 3322 357
Q ss_pred EEeeC-CchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCC---eEEecCCccchhhhcCCHHHHHHHHH
Q 006890 246 EVRDY-DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD---KVLLQQSPLALAKAIKNPVELDGLKK 321 (627)
Q Consensus 246 ~v~~y-~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~---~~~~~~~~i~~~r~iK~~~Ei~~~r~ 321 (627)
++..| .+..+.+..+... .+.++|++|...+++..++.|.+. ++++.++++..+|++||++||+.||+
T Consensus 70 ~v~~~~~~~~~~l~~~l~~--------~~~~~igve~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~iK~~~Ei~~~r~ 141 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKE--------LGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKE 141 (356)
T ss_dssp EEEECSSCHHHHHHHHHHH--------HTCSEEEEETTTSBHHHHHHHHHHCCSEEEEECSHHHHHHTSCCHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHHh--------cCCceEEEcCccCCHHHHHHHhhhcccceecchhhhhhhccCCCHHHHHHHHH
Confidence 77776 3344444444321 135789999988999888876542 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCC
Q 006890 322 AHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPN 401 (627)
Q Consensus 322 A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n 401 (627)
|+++++.++..+++++ ++|+||.|+++.++.++. ..|+.+.+|++|+++|+|
T Consensus 142 A~~i~~~~~~~~~~~i---------------------------~~G~te~e~~~~~~~~~~-~~g~~~~~f~~iv~~g~n 193 (356)
T 3q6d_A 142 AAQIADAAFEHILSFI---------------------------RPGVSEIEVSNELEFFMR-KQGATSSSFDIIVASGLR 193 (356)
T ss_dssp HHHHHHHHHHHHTTTC---------------------------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGG
T ss_pred HHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHH-HCCCCcCCCCCEEEEcCc
Confidence 9999999988776653 799999999999998774 567788899999999999
Q ss_pred cccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHH
Q 006890 402 AAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDI 481 (627)
Q Consensus 402 ~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~ 481 (627)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.
T Consensus 194 ~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~ 269 (356)
T 3q6d_A 194 SALPHGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADA 269 (356)
T ss_dssp GGCTTCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHH
T ss_pred cccCCCCCCC---cccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999997 999999999
Q ss_pred HHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccc
Q 006890 482 LARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKF 559 (627)
Q Consensus 482 ~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~ 559 (627)
++++++++.|+ +|.|++||||| |++||+|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|+
T Consensus 270 ~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~G~-- 343 (356)
T 3q6d_A 270 LTRDYITEKGYGEYFGHSTGHGIG--LEIHEAPGL-AFR-SDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGN-- 343 (356)
T ss_dssp HHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSSSE--
T ss_pred HHHHHHHHcCCcccCCCCCcccCC--CCcCcCCCC-CCC-CCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCCcc--
Confidence 99999999999 68999999999 999999975 333 67899999999999999999999999999999999997
Q ss_pred ccCCcceeeeeccccccccc
Q 006890 560 NFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 560 ~~~~~~~~~fe~lT~~p~~~ 579 (627)
|.||..|.++
T Consensus 344 ----------e~Lt~~p~~l 353 (356)
T 3q6d_A 344 ----------EVITKSPKEL 353 (356)
T ss_dssp ----------EECCCSCCSC
T ss_pred ----------eeCCCCCcce
Confidence 9999988764
|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-65 Score=548.94 Aligned_cols=369 Identities=24% Similarity=0.320 Sum_probs=312.4
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCC
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVS 233 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~ 233 (627)
|++.++..|++.++.+|++++|+.|+++++|++++++++|++||||+++.+.. . .++++|+.+ +++|+++..+..
T Consensus 2 ~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~~-r---~~~l~v~~~g~~~l~~~~~~~~ 77 (378)
T 4ege_A 2 PGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTFE-R---LTALVLPASGVPTIVLPRLELA 77 (378)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCSS-S---CCEEEEESSSCCEEEEEGGGGG
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCCc-c---eEEEEEEeCCcEEEEEChhhHH
Confidence 78899999999999999999999999999999999999999999999986521 1 267888754 789999876654
Q ss_pred HHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC---CCeEEecCCccchhhhc
Q 006890 234 SEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN---SDKVLLQQSPLALAKAI 310 (627)
Q Consensus 234 ~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~---~~~~~~~~~~i~~~r~i 310 (627)
...++.+...++++.+|.+..+++..++. .+. ...++|++| ..+++..+..|. ..++++.++++..+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~-----~~~~~igve-~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~i 150 (378)
T 4ege_A 78 SLKESAASDLGVCVRDWVDGDDPYQLVAV-ALG-----GAPAATAVT-DSMPALHLLPLADALGVLPVLATDVLRQLRMV 150 (378)
T ss_dssp GGGTSSTTTTTCEEEEECTTSCHHHHHHH-HTT-----SSSCCEEEC-TTCCHHHHHHHHHHHTSCCEESHHHHHHHHTB
T ss_pred HHHhcccCCCCeEEEEecCCCCHHHHHHH-HHh-----cCCCEEEEc-CCCcHHHHHHHHHHcCCeEEEcHHHHHHHHHc
Confidence 33222222346788888664444433332 221 123589999 568887766654 45889999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCC
Q 006890 311 KNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGL 390 (627)
Q Consensus 311 K~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~ 390 (627)
||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++. ..|..+.
T Consensus 151 Ks~~Ei~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~tE~el~~~~~~~~~-~~G~~~~ 202 (378)
T 4ege_A 151 KEAAEVDALAKAGAAIDRVHARVPAFL---------------------------VPGRTEAQVAADIAEAIV-AEGHSAV 202 (378)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHH-HcCCCCC
Confidence 999999999999999999999888775 789999999999999874 4566777
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeeccee-cCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhcc
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQY-QDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAV 469 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y-~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~ 469 (627)
+| +|+++|+|++.+||.|++ ++|++||+|++|+|++| +||++|+||||++|+|+++++++|+.+++++.++++++
T Consensus 203 ~f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~ 278 (378)
T 4ege_A 203 AF-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAV 278 (378)
T ss_dssp EE-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred Ce-eEEEeeCCCCccCCCCCC---CCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 89 999999999999999975 89999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEe
Q 006890 470 FPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLE 547 (627)
Q Consensus 470 ~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriE 547 (627)
+| |+++++|+.++++++++.|+ +|.|++||||| |++||.|.+... ++.+|+||||||+|||+|.+|.+|||||
T Consensus 279 ~p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~i~~~--~~~~L~~Gmv~tiEPgiy~~g~~gvriE 353 (378)
T 4ege_A 279 RP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPYIVAG--NELPLVAGMAFSIEPGIYFPGRWGARIE 353 (378)
T ss_dssp CT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEECTT--CCCBCCTTBEEEECCEEEETTTEEEECB
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCccCCC--CCCccCCCCEEEECCEEEeCCccEEEEe
Confidence 97 99999999999999999999 68999999999 999999987543 6789999999999999999999999999
Q ss_pred EeeEEecCCcccccCCcceeeeeccccccccccccc
Q 006890 548 NVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMIN 583 (627)
Q Consensus 548 d~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~ 583 (627)
|+|+||++|+ |.||..|.++-.|+
T Consensus 354 d~v~Vt~~G~------------e~Lt~~p~~l~~~~ 377 (378)
T 4ege_A 354 DIVVVTENGA------------LSVNNRPHELMVVP 377 (378)
T ss_dssp EEEEEETTEE------------EESCCSCCSCEEEC
T ss_pred eEEEEeCCcC------------eECCCCCCccEEcc
Confidence 9999999997 99999998765543
|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-63 Score=529.05 Aligned_cols=342 Identities=25% Similarity=0.393 Sum_probs=301.3
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCcc-----ceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCC
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEV-----AWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESG 244 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni-----~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~ 244 (627)
+|+++||+.|++.++|++++++++|+ +||||+++++ ++++|+.++++||++.++..+..++ .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r~~~~a~~~----~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSRYTVQAKQE----TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTTTHHHHHHH----CC
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECcccHHHHHhC----CC
Confidence 37999999999999999999999999 9999999865 7999999999999998876554333 36
Q ss_pred eEEeeC-Cc-hhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC----CeEEecCCccchhhhcCCHHHHHH
Q 006890 245 VEVRDY-DA-VSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS----DKVLLQQSPLALAKAIKNPVELDG 318 (627)
Q Consensus 245 v~v~~y-~~-~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~----~~~~~~~~~i~~~r~iK~~~Ei~~ 318 (627)
+++..| .+ ..+.+..+... .+.++|++|...+++..++.+.+ .++++.++++..+|++||++||+.
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~--------~~~~~vgvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lr~iK~~~Ei~~ 141 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVND--------LKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEK 141 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHH--------TTCCEEEECGGGSBHHHHHHHHHHTTTCEEEECHHHHHHHHHBCCHHHHHH
T ss_pred CEEEEecCcchHHHHHHHHHh--------cCCCEEEEeCCcCCHHHHHHHHhhCCCcEEEEChhhhhhhhcCCCHHHHHH
Confidence 788887 33 33444444321 12468999988888887776643 478899899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCccccc
Q 006890 319 LKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSV 398 (627)
Q Consensus 319 ~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~ 398 (627)
||+|+++++.++..+++++ ++|+||.|+++.++..+ ...|..+.+|++|+++
T Consensus 142 ~r~a~~~~~~~~~~~~~~~---------------------------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~ 193 (359)
T 2zsg_A 142 IKQAIEISERAFLETVQQI---------------------------RAGMTEKEIAALLEYTM-RKEGAEGVAFDTIVAS 193 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTC---------------------------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHH-HHcCCCCCCCCCEEEE
Confidence 9999999999999887764 78999999999999877 4567777899999999
Q ss_pred CCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccch
Q 006890 399 GPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHT 478 (627)
Q Consensus 399 G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~ 478 (627)
|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++
T Consensus 194 g~~~~~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~ 269 (359)
T 2zsg_A 194 GCRSALPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKL 269 (359)
T ss_dssp GGGGGSTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHH
T ss_pred ccccccccCCCCC---cccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHH
Confidence 9999999999975 899999999999999999999999999999999999999999999999999999997 999999
Q ss_pred HHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCC
Q 006890 479 LDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDAN 556 (627)
Q Consensus 479 l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g 556 (627)
|+.++++++++.|+ +|.|++||||| +++||.|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|
T Consensus 270 v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~~-~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~g 345 (359)
T 2zsg_A 270 LDSVAREFIREKGYGEFFGHSLGHGIG--LEVHEGPAI-SFR-NDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQG 345 (359)
T ss_dssp HHHHHHHHHHHTTCGGGBCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETTE
T ss_pred HHHHHHHHHHHcCCcccCCCCCccccC--cccCCCCCc-CCC-CCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCCc
Confidence 99999999999999 68999999999 999999965 333 6789999999999999999999999999999999999
Q ss_pred cccccCCcceeeeeccccccccc
Q 006890 557 TKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 557 ~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
+ |+||..|.+.
T Consensus 346 ~------------e~Lt~~~~~l 356 (359)
T 2zsg_A 346 C------------EILTTLPRSI 356 (359)
T ss_dssp E------------EECCCSCCSC
T ss_pred c------------eECCCCCccc
Confidence 6 9999888765
|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-64 Score=535.45 Aligned_cols=361 Identities=20% Similarity=0.283 Sum_probs=303.1
Q ss_pred cccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHH
Q 006890 160 QIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 160 ~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~ 238 (627)
+..|.-.++++|++++|+.|+++|+|++++++++|++||||+++.+....| .+++++.+ .++++.+... ...
T Consensus 7 ~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~~~~-~~~--- 79 (377)
T 4fkc_A 7 HHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAPRLY-EKE--- 79 (377)
T ss_dssp -CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEEGGG-HHH---
T ss_pred CCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcce---EEEEEcCCCcEEEEeccch-HHH---
Confidence 455777899999999999999999999999999999999999987654444 34566655 4555554332 222
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhhcCCHH
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAIKNPV 314 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~iK~~~ 314 (627)
++....++..|.+..++...++. .+... ...+.++++|. .+++..+..+ +..++++.++++..+|+|||++
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~i~~d~-~~~~~~~~~l~~~~~~~~~~d~~~~i~~lR~iKs~~ 154 (377)
T 4fkc_A 80 -LEEFNGEVVLWSDSENPYKIFAT-KIKET--FKEGEKLLIDD-TMPVGVFLKAKDIFDKYSLHPISPVISELREIKDKD 154 (377)
T ss_dssp -HTTCSSEEEEECTTSCHHHHHHH-HHHHH--SCSSCEEEECT-TSCHHHHHHTHHHHTTSEEEESHHHHHHHHTSCCHH
T ss_pred -HHhcCCCEEEeccccCHHHHHHH-HHHHh--hhccceeeeec-cccHHHHHHHHhhCCCCeEEEhHHHHHHHHhcCCHH
Confidence 23445666766654433332221 11000 02467899985 4787776655 4568999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCc
Q 006890 315 ELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPT 394 (627)
Q Consensus 315 Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~ 394 (627)
||+.||+|+++++.++.++++++ ++|+||.|+++.++..+.++.|+.+.+|++
T Consensus 155 EI~~~r~A~~i~~~a~~~~~~~~---------------------------~~G~tE~el~~~~~~~~~~~~g~~~~~f~~ 207 (377)
T 4fkc_A 155 EIKAHKKAAEIVDKVFYRFIEGK---------------------------LEGKSERELANRIEYMIKNEFGADDVSFEP 207 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSC---------------------------CTTCBHHHHHHHHHHHHHTSTTCCEESSCC
T ss_pred HHHHHHHHHHHHHHHHHhhhhcc---------------------------CCCccHHHHHHHHhhhhhhccCCCCcccCc
Confidence 99999999999999998877653 799999999999998776666788899999
Q ss_pred ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 006890 395 ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 395 i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++++++| |+
T Consensus 208 iv~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~ 283 (377)
T 4fkc_A 208 IVASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-GI 283 (377)
T ss_dssp EEEEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-TC
T ss_pred ccccccccccccccccc---ccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcC-Cc
Confidence 99999999999999986 899999999999999999999999999999999999999999999999999999997 99
Q ss_pred ccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 475 CGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++++++.++++++++.|+ +|.|++||||| |++||.|.+.. + ++.+|+||||||+|||+|.+|.+||||||+|+|
T Consensus 284 ~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~i~~-~-~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 284 PAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPYISP-G-NKKILKDGMVFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp BHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEEECS-S-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred chhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCcccC-C-CCCEeCCCCEEEECCeeEECCccEEEEccEEEE
Confidence 999999999999999998 58999999999 99999998643 3 778999999999999999999999999999999
Q ss_pred ecCCcccccCCcceeeeeccccccccc
Q 006890 553 TDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 553 ~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
|++|+ |+||..|.++
T Consensus 360 t~~g~------------e~Lt~~p~el 374 (377)
T 4fkc_A 360 VDKKG------------IRLTNADREL 374 (377)
T ss_dssp ETTEE------------EESCCSCCSC
T ss_pred ECCCc------------EECCCCCCCe
Confidence 99997 8999888643
|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-63 Score=526.34 Aligned_cols=344 Identities=22% Similarity=0.245 Sum_probs=297.6
Q ss_pred HHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCc-eEEEEeCCCCCHHHHHhhhhCCeEEee
Q 006890 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNA-AFLYVDKRKVSSEVISFLKESGVEVRD 249 (627)
Q Consensus 171 ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~-~~L~v~~~~~~~~~~~~l~~~~v~v~~ 249 (627)
|++++|+.|+++++|++++++++|++||||+++. +++.+ .++++|+.++ ++||++..+... ... +++.+
T Consensus 2 R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~~-----~~~--~~v~~ 71 (356)
T 1wn1_A 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYENV-----VNN--FPATF 71 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTTT-----TTT--SCEEE
T ss_pred HHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHHH-----hhC--CeEEE
Confidence 8999999999999999999999999999999873 44444 3788888665 999999877542 111 45666
Q ss_pred CCch---hHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhhhcCCHHHHHHHHHHH
Q 006890 250 YDAV---SSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAKAIKNPVELDGLKKAH 323 (627)
Q Consensus 250 y~~~---~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 323 (627)
|.+. .+.+..+.... + ...++|++| ..+++..+..|.+ .++++.++++..+|++||++||+.||+|+
T Consensus 72 ~~~~~~~~~~l~~~l~~~----~--~~~~~i~~~-~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~iK~~~Ei~~~r~A~ 144 (356)
T 1wn1_A 72 WHDGENPYAKLREILEEL----G--ISKGRILIE-DTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHAS 144 (356)
T ss_dssp ECTTSCHHHHHHHHHHHT----T--CSSEEEEEC-TTSBHHHHHHHGGGSCEEEEETHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHh----c--CCCCEEEEe-CCcCHHHHHHHHcCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 6432 23333332211 0 135689999 6788888888754 37889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcc
Q 006890 324 IRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAA 403 (627)
Q Consensus 324 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a 403 (627)
++++.++.++++++ ++|+||.|+++.++.++.+. +.+.+|++|+++|+|++
T Consensus 145 ~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~ 195 (356)
T 1wn1_A 145 RIADKVFEEILTWD---------------------------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAA 195 (356)
T ss_dssp HHHHHHHHHHTTSC---------------------------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGG
T ss_pred HHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEecccc
Confidence 99999999887764 78999999999999987554 56789999999999999
Q ss_pred cccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHH
Q 006890 404 IMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483 (627)
Q Consensus 404 ~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a 483 (627)
++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++
T Consensus 196 ~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~ 271 (356)
T 1wn1_A 196 NPHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRA 271 (356)
T ss_dssp CTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHH
T ss_pred cccCCCCC---CeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHH
Confidence 99999975 899999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccccc
Q 006890 484 RLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNF 561 (627)
Q Consensus 484 ~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~~~ 561 (627)
++++++.|+ +|.|++||||| +++||.|.+. .+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|+
T Consensus 272 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~-~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~g~---- 343 (356)
T 1wn1_A 272 REVISKAGYGEYFIHRTGHGLG--LDVHEEPYIG-PD-GEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKG---- 343 (356)
T ss_dssp HHHHHTTTCGGGCCSCSEEECS--SSSSEEEEES-TT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETTEE----
T ss_pred HHHHHHcCCcccCCCCCcccCC--CccCCCcccC-CC-CCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCCcc----
Confidence 999999999 68999999999 9999999864 33 67899999999999999999999999999999999986
Q ss_pred CCcceeeeecccccccccc
Q 006890 562 GDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 562 ~~~~~~~fe~lT~~p~~~~ 580 (627)
|+||.+|.+..
T Consensus 344 --------e~Lt~~p~~l~ 354 (356)
T 1wn1_A 344 --------RRLTKAERELI 354 (356)
T ss_dssp --------EESCCCCCSCC
T ss_pred --------EECCCCCCcce
Confidence 99999988654
|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-62 Score=519.37 Aligned_cols=337 Identities=24% Similarity=0.327 Sum_probs=294.9
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEE-EEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAF-AIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~-~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
.+|++++|+.|+++++|++++++++|++||||+++.+ .+| ++++.++..++++.+. ..+ ++ ..++++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~-~~~-~~---~~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY-EMA-KE---ESNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH-HHH-HH---HCSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECchH-HHH-hh---cCCCeE
Confidence 4799999999999999999999999999999998765 246 7788888888888765 322 22 235677
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC----CeEEecCCccchhhhcCCHHHHHHHHHHH
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS----DKVLLQQSPLALAKAIKNPVELDGLKKAH 323 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~----~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 323 (627)
..|+.+ +.+..+.. +.++|++| ..+++..++.|.+ .++++.++++..+|++||++||+.||+|+
T Consensus 73 ~~~~~~-~~l~~~l~----------~~~~ig~e-~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 140 (351)
T 1wy2_A 73 EKFKKM-DEFYKALE----------GIKSLGIE-SSLPYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKAC 140 (351)
T ss_dssp EEESSH-HHHHHHHT----------TCSEEEEC-TTCBHHHHHHHHHHSCCCEEEECHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred EEeCcH-HHHHHHHc----------cCCEEEEc-CcCCHHHHHHHHhhCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 777653 33333332 23589999 7789888777643 27899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcc
Q 006890 324 IRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAA 403 (627)
Q Consensus 324 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a 403 (627)
++++.++..+++++ ++|+||.|+++.++..+ ...|..+.+|++|+++|+|++
T Consensus 141 ~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~ 192 (351)
T 1wy2_A 141 EIADKAVMAAIEEI---------------------------TEGKKEREVAAKVEYLM-KMNGAEKPAFDTIIASGYRSA 192 (351)
T ss_dssp HHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGG
T ss_pred HHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccc
Confidence 99999999887764 78999999999999877 456777889999999999999
Q ss_pred cccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHH
Q 006890 404 IMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483 (627)
Q Consensus 404 ~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a 483 (627)
++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++
T Consensus 193 ~~H~~~~~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~ 268 (351)
T 1wy2_A 193 LPHGVASD---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIA 268 (351)
T ss_dssp STTCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCC---cccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHH
Confidence 99999985 899999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccccc
Q 006890 484 RLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNF 561 (627)
Q Consensus 484 ~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~~~ 561 (627)
++++++.|+ +|.|++||||| +++||+|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+|| +|+
T Consensus 269 ~~~~~~~g~~~~~~h~~GHgiG--l~~hE~p~i-~~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~G~---- 339 (351)
T 1wy2_A 269 RNIIAEYGYGEYFNHSLGHGVG--LEVHEWPRV-SQY-DETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-KNG---- 339 (351)
T ss_dssp HHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-TTE----
T ss_pred HHHHHHcCCcccCCCCcccccC--CCcCCCCcc-CCC-CCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-CCc----
Confidence 999999998 58999999999 999999976 333 6789999999999999999999999999999999 996
Q ss_pred CCcceeeee-cccccccc
Q 006890 562 GDKGYLSFE-HITWAPYQ 578 (627)
Q Consensus 562 ~~~~~~~fe-~lT~~p~~ 578 (627)
| .||..|.+
T Consensus 340 --------e~~Lt~~p~~ 349 (351)
T 1wy2_A 340 --------SKRLTKTERE 349 (351)
T ss_dssp --------EEESCCSCSC
T ss_pred --------eecCCCCCcc
Confidence 8 99988875
|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-60 Score=525.24 Aligned_cols=373 Identities=15% Similarity=0.172 Sum_probs=308.6
Q ss_pred ccccCCcHHHHHHHHHHHhh--ccCCcEEEEecCC----cc--------ceEEccccCCCCCCcceeEEEEEECCceEEE
Q 006890 161 IEFAGSSVVEKLKELREKLT--NEKARGIIITTLD----EV--------AWLYNIRGTDVPYCPVVHAFAIVTTNAAFLY 226 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~--~~~~d~lll~~~d----ni--------~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~ 226 (627)
..+++.++.+|+++||+.|+ ++++|++++++++ |+ +||||+++.+ ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCCC--------EEEEEECCeEEEE
Confidence 35788999999999999999 9999999999998 99 6999998632 7999999899999
Q ss_pred EeCCCCC--HHHHH--hhhhC--CeEEeeC--Cc------hhHHHHHHhhccCCCCCCCCCCCEEEEc-CCCCcHHHHhh
Q 006890 227 VDKRKVS--SEVIS--FLKES--GVEVRDY--DA------VSSDVVLLQSNQLNPPADVQGSDLIWAD-PNSCSYALYSK 291 (627)
Q Consensus 227 v~~~~~~--~~~~~--~l~~~--~v~v~~y--~~------~~~~~~~~~~~~l~~~~~~~~~~~I~iD-~~~~~~~~~~~ 291 (627)
++.++.. ..+++ .+... ++++..| .+ ..+.+..+... .+++|+++ ...++...+..
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~---------~~~~Igv~~~~~~s~~~~~~ 148 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINS---------AGKTVGIPEKDSYQGKFMTE 148 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHH---------HCSEEEECTTCCCCSHHHHH
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHh---------hCCEEEEecCcccchhHHHH
Confidence 9986532 12222 11111 3666666 32 22333333211 14589995 45667766654
Q ss_pred cC----------CCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Q 006890 292 LN----------SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKK 361 (627)
Q Consensus 292 l~----------~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 361 (627)
|. ..++++..+++..+|+|||++||+.||+|+++++.++..+++++++.+..
T Consensus 149 L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~------------------ 210 (467)
T 3biq_A 149 WNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDE------------------ 210 (467)
T ss_dssp HHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc------------------
Confidence 42 35788999999999999999999999999999999999999999776532
Q ss_pred cCCCCCcCHHHHHHHHHHHHHhh----cC-------------C----CCCcCCcccccCCCcc-cccccCCCCccCCCCC
Q 006890 362 HSGTVKLTEVTVSDKLESFRASK----EH-------------F----RGLSFPTISSVGPNAA-IMHYSPQSETCAEMDP 419 (627)
Q Consensus 362 ~~~~~g~tE~ei~~~l~~~~~~~----~g-------------~----~~~~f~~i~~~G~n~a-~~h~~~~~~~~~~l~~ 419 (627)
..|+||.++++.++.++.+. .| + .+.+|++|+++|+|++ ++||.|++ ++|++
T Consensus 211 ---g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~ 284 (467)
T 3biq_A 211 ---ELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYG 284 (467)
T ss_dssp ---TCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCC
T ss_pred ---cCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCC---CccCC
Confidence 34899999999999876430 22 2 3679999999999999 99999975 89999
Q ss_pred CCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCcccchHHHHHHHHHHHcC--C--CC
Q 006890 420 NSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNA-VFPNGTCGHTLDILARLPLWKYG--L--DY 494 (627)
Q Consensus 420 gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~-~~p~G~~~~~l~~~a~~~l~~~G--~--~~ 494 (627)
||+|++|+|++|.||++|+||||++| |+++|+++|+.|++++.+++++ ++| |+++++|+.++++++++.| + +|
T Consensus 285 gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~ 362 (467)
T 3biq_A 285 NGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNF 362 (467)
T ss_dssp SEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGB
T ss_pred CCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcC
Confidence 99999999999999999999999999 9999999999999999999999 987 9999999999999999997 3 68
Q ss_pred cccccccccccCccccCCCcCCCCCC-CCcccCCcEEeeCceee-e-----cCccEEEEeEeeEEe--cCCcccccCCcc
Q 006890 495 RHGTGHGVGSYLNVHEGPQSISFKPR-NVPIHASMTATDEPGYY-E-----DGNFGIRLENVLVVT--DANTKFNFGDKG 565 (627)
Q Consensus 495 ~h~~GHgvG~~l~vhE~P~~~~~~~~-~~~l~~Gmv~siEPg~y-~-----~~~~GvriEd~v~V~--~~g~~~~~~~~~ 565 (627)
.|++||||| |++||.|.+++.+ + +.+|+||||||+|||+| . +|.+||||||+|+|| ++|+
T Consensus 363 ~h~~GHgiG--l~~hE~p~~~~~~-~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~G~-------- 431 (467)
T 3biq_A 363 TKNIGSLIG--LEFRDSNFILNVK-NDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDETEP-------- 431 (467)
T ss_dssp CSCCEEECS--SSSCCGGGBSSTT-CCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTTSC--------
T ss_pred CCCcccccc--cccccCCccCCCC-CCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCCCc--------
Confidence 999999999 9999999866654 6 78999999999999999 7 889999999999999 8885
Q ss_pred eeeeeccc-ccccccccccccCCCHHH
Q 006890 566 YLSFEHIT-WAPYQIKMINLKSLTPEE 591 (627)
Q Consensus 566 ~~~fe~lT-~~p~~~~~i~~~~l~~~e 591 (627)
|+|| .+|+++..|+..|++++|
T Consensus 432 ----e~Lt~~~p~~~~~i~~~~~~~~e 454 (467)
T 3biq_A 432 ----PRFLTNYTKAKSQISFYFNNEEE 454 (467)
T ss_dssp ----CEESCCSCCCHHHHEECC-----
T ss_pred ----EEecccCCCCHHHHHHHHhcccc
Confidence 9999 999999999999999988
|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-60 Score=509.89 Aligned_cols=360 Identities=13% Similarity=0.093 Sum_probs=301.9
Q ss_pred cccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhh
Q 006890 162 EFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
.++..++.+|+++||+.|+++++|++++++++|++|||||++++. ..| ++++|+.+++.||++.++..+..++ +.
T Consensus 18 ~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~a~~~-~~ 92 (402)
T 1kp0_A 18 PFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGMPWRR-SF 92 (402)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHHH-CS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhhhhHHh-cc
Confidence 467788999999999999999999999999999999999998654 344 7889998889999998887765443 21
Q ss_pred hCCeEEeeCC--chhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcCCHHH
Q 006890 242 ESGVEVRDYD--AVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIKNPVE 315 (627)
Q Consensus 242 ~~~v~v~~y~--~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK~~~E 315 (627)
...+.+.+|. ...+.+..+.. .+++|++|...+++..++.+. ..++++..+++..+|++||++|
T Consensus 93 ~~~v~~~~~~~~~~~~~l~~~l~----------~~~~igvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iKs~~E 162 (402)
T 1kp0_A 93 GBNIVYTDWKRDNFYSAVKKLVK----------GAKZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEE 162 (402)
T ss_dssp SEEEEECSSSTTHHHHHHHHHHT----------TCSEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHH
T ss_pred CcceEeccccccCHHHHHHHHhc----------cCCEEEEecCCCCHHHHHHHHHhCCCCEEEECHHHHHHHHHcCCHHH
Confidence 1122222331 22233333321 356899999888988877664 3478998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc--CC-CCC--
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE--HF-RGL-- 390 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~--g~-~~~-- 390 (627)
|+.||+|+++++.++..+++++ ++|+||.|+++.++.++.... .+ .+.
T Consensus 163 i~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~g~~~~~~~~~~ 215 (402)
T 1kp0_A 163 ZBLIRZGARISDIGGAATAAAI---------------------------SAGVPEYEVAIATTBAMVRZIARBFPYVELM 215 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---------------------------cCCCcHHHHHHHHHHHHHHhcccccCccccc
Confidence 9999999999999999888775 789999999999988664331 11 122
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccC
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~ 470 (627)
.+.+|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++++++
T Consensus 216 ~~~~iv~~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~ 292 (402)
T 1kp0_A 216 DTWIWFQSGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIK 292 (402)
T ss_dssp EEEEEEEEGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CccceeecccccccccCCCCC---cccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 233589999999999999875 89999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCC--CC-CCCcccCCcEEeeCceeeec----Cc
Q 006890 471 PNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISF--KP-RNVPIHASMTATDEPGYYED----GN 541 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~--~~-~~~~l~~Gmv~siEPg~y~~----~~ 541 (627)
| |+++++|+.++++++++.|+. +.|++||||| +++||.|..++. .+ ++.+|+||||||+|||+|.+ +.
T Consensus 293 p-G~~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~ 369 (402)
T 1kp0_A 293 P-GARCKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGA 369 (402)
T ss_dssp T-TCBHHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTC
T ss_pred C-CCcHHHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCC
Confidence 8 999999999999999999995 8899999999 899998875321 11 57899999999999999998 88
Q ss_pred cEEEEeEeeEEecCCcccccCCcceeeeeccccccccccc
Q 006890 542 FGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKM 581 (627)
Q Consensus 542 ~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~ 581 (627)
+|+|+||+|+||++|+ |+||.+|+++++
T Consensus 370 ~G~ried~v~Vt~~g~------------e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 370 GGYREHDILVIKENBT------------ENITGFPFGPEH 397 (402)
T ss_dssp EEEECBEEEEEETTEE------------EECCCSCCSTTT
T ss_pred CcEEEEEEEEEcCCcc------------eECCCCCCchHH
Confidence 9999999999999986 999999998765
|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-58 Score=498.35 Aligned_cols=362 Identities=15% Similarity=0.123 Sum_probs=296.3
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEE-EEECCceEEEEeCCCCCHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFA-IVTTNAAFLYVDKRKVSSEVI 237 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~-lv~~~~~~L~v~~~~~~~~~~ 237 (627)
.+..|++.++.+|++++|+.|+++++|++++++++|++||+|+. |+|++.+++ +|+.++++++++..+.....+
T Consensus 14 ~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~-----~~~~~~~~~llv~~~~~~l~~~~~~~~~~~~ 88 (401)
T 1chm_A 14 VRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFL-----YCSFGRPYALVVTEDDVISISANIDGGQPWR 88 (401)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCC-----CCCTTCCCEEEECSSCEEEEEEGGGTTHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCC-----cCCCCCeEEEEEecCCCEEEecccchhhHHH
Confidence 45678999999999999999999999999999999999998875 456655555 467788888988776655333
Q ss_pred HhhhhCCeEEeeC--CchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 238 SFLKESGVEVRDY--DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 238 ~~l~~~~v~v~~y--~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
+.+....+.+.+| .++.+.+..+. . ..++|++|...+++..++.|. ..++++.++++..+|+||
T Consensus 89 ~~~~~~~v~~~~~~~~~~~~~l~~~l----~------~~~~i~ve~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~R~iK 158 (401)
T 1chm_A 89 RTVGTDNIVYTDWQRDNYFAAIQQAL----P------KARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIK 158 (401)
T ss_dssp HCCSSEEEEECTTSTTHHHHHHHHHC----S------CCSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHHTSC
T ss_pred hhcccceeeeccccccCHHHHHHHHh----c------cCCeEEEecCCCCHHHHHHHHhhCCCCEEEEhHHHHHHHHhcC
Confidence 3221011222222 12233333332 1 356899998888988887764 458999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh---cCCC
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK---EHFR 388 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~---~g~~ 388 (627)
|++||+.||+|+++++.++..+.+.+ ++|+||.|+++.++..+... ....
T Consensus 159 s~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~tE~el~~~~~~~~~~~~~~~~~~ 211 (401)
T 1chm_A 159 SAEEHVMIRHGARIADIGGAAVVEAL---------------------------GDQVPEYEVALHATQAMVRAIADTFED 211 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999988766643 78999999999887644322 1112
Q ss_pred CCcCCc--ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 006890 389 GLSFPT--ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALG 466 (627)
Q Consensus 389 ~~~f~~--i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~ 466 (627)
..+|++ ++++|.|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++
T Consensus 212 ~~~~~~~~~~~~g~n~~~~H~~~~~---~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i 288 (401)
T 1chm_A 212 VELMDTWTWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGL 288 (401)
T ss_dssp CCBCCCEEEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeeecccccccccCCCC---CccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 235776 47899999999999875 8999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcC----CCCCCCCcccCCcEEeeCceeeec-
Q 006890 467 NAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSI----SFKPRNVPIHASMTATDEPGYYED- 539 (627)
Q Consensus 467 ~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~----~~~~~~~~l~~Gmv~siEPg~y~~- 539 (627)
++++| |+++++|+.++++.+++.|+ .+.|++||||| +.+||.|... ..+ ++.+|+||||||+|||+|.+
T Consensus 289 ~~~~p-G~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~-~~~~L~~Gmv~tiEPgiy~~~ 364 (401)
T 1chm_A 289 KLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELRED-IDTVLEPGMVVSMEPMIMLPE 364 (401)
T ss_dssp HHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTT-CCCBCCTTCEEEECCEEEECT
T ss_pred HHcCC-CCcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCC-CCCccCCCCEEEEcCeeeecc
Confidence 99998 99999999999999999999 36799999999 8899976532 222 57899999999999999998
Q ss_pred ---CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccccc
Q 006890 540 ---GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKM 581 (627)
Q Consensus 540 ---~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~ 581 (627)
|.+|+||||+|+||++|+ |+||.+|++.++
T Consensus 365 ~~~g~~GvriEd~vlVt~~G~------------e~LT~~p~~~~~ 397 (401)
T 1chm_A 365 GLPGAGGYREHDILIVNENGA------------ENITKFPYGPEK 397 (401)
T ss_dssp TSTTCEEEECBEEEEEETTEE------------EECCCSCCSHHH
T ss_pred ccCCCCeEEEeeeEEECCCcc------------eECCCCCCChhh
Confidence 889999999999999996 999999987643
|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-58 Score=505.64 Aligned_cols=368 Identities=15% Similarity=0.173 Sum_probs=300.1
Q ss_pred ccccCCcHHHHHHHHHHHhhc--------cCCcEEEEecCC----c--------cceEEccccCCCCCCcceeEEEEEEC
Q 006890 161 IEFAGSSVVEKLKELREKLTN--------EKARGIIITTLD----E--------VAWLYNIRGTDVPYCPVVHAFAIVTT 220 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~~--------~~~d~lll~~~d----n--------i~wLtg~rg~d~~~~P~~~a~~lv~~ 220 (627)
..+++.++.+|+++||+.|++ .++|++++++++ + ++||||+++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 457889999999999999998 999999999996 6 89999998765 7889998
Q ss_pred CceEEEEeCCCC--CHHHH-HhhhhCCeEEeeC-CchhH---HHHHHhhccCCCCCCCCCCCEEEEcC-CCCcHHH----
Q 006890 221 NAAFLYVDKRKV--SSEVI-SFLKESGVEVRDY-DAVSS---DVVLLQSNQLNPPADVQGSDLIWADP-NSCSYAL---- 288 (627)
Q Consensus 221 ~~~~L~v~~~~~--~~~~~-~~l~~~~v~v~~y-~~~~~---~~~~~~~~~l~~~~~~~~~~~I~iD~-~~~~~~~---- 288 (627)
++++||++..+. ....+ ..+....+++..| .+... .+..+.. .+.. .+++|+++. ...+...
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~l~~-----~~~~ig~~~~~~~~~~~~~~l 151 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIE-YIRA-----TNKKVGVFPKDKTQGKFINEW 151 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHH-HHHT-----TTSEEEECTTCCCCSHHHHHH
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHH-HHHh-----cCCEEEEeccccchhHHHHHH
Confidence 889999987532 12222 2221113555555 32211 1222221 1111 246899975 4455433
Q ss_pred HhhcC----CCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhccccccccccccccccC
Q 006890 289 YSKLN----SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIV-QYIIWLDKQMQEIYGASGYFLEGEATKEKKHS 363 (627)
Q Consensus 289 ~~~l~----~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (627)
...+. ..++++.++++..+|+|||++||+.||+|+++++.++. .++.|+.+.+
T Consensus 152 ~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i---------------------- 209 (444)
T 3cb6_A 152 DSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYI---------------------- 209 (444)
T ss_dssp HHHHTTTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH----------------------
T ss_pred HHHHhhccCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------
Confidence 23442 35789999999999999999999999999999999999 7887876655
Q ss_pred CCCC--cCHHHHHHHHHHHHHhh-------cC---C----CCCcCCcccccCCCcc-cccccCCCCccCCCCCCCeEEEe
Q 006890 364 GTVK--LTEVTVSDKLESFRASK-------EH---F----RGLSFPTISSVGPNAA-IMHYSPQSETCAEMDPNSIYLCD 426 (627)
Q Consensus 364 ~~~g--~tE~ei~~~l~~~~~~~-------~g---~----~~~~f~~i~~~G~n~a-~~h~~~~~~~~~~l~~gd~vliD 426 (627)
++| +||.++++.++.++... .| + .+++|++|+++|+|++ ++||.|++ ++|+ ||+|++|
T Consensus 210 -~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~---~~l~-gd~v~iD 284 (444)
T 3cb6_A 210 -DQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDD---RNLH-GDVVLCS 284 (444)
T ss_dssp -HHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCC-SSEEEEE
T ss_pred -ccccccCHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCCC---Cccc-CCEEEEE
Confidence 356 99999999999865321 12 2 2578999999999999 99999975 8898 9999999
Q ss_pred ecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcC--C--CCcccccccc
Q 006890 427 SGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYG--L--DYRHGTGHGV 502 (627)
Q Consensus 427 ~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G--~--~~~h~~GHgv 502 (627)
+|++|+||++|+||||++| |+++|+++|+.|++++.+++++++| |+++++|+.++++++++.| + +|.|++||||
T Consensus 285 ~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgi 362 (444)
T 3cb6_A 285 LGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGI 362 (444)
T ss_dssp ECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEEC
T ss_pred EeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhccccccccc
Confidence 9999999999999999998 8999999999999999999999997 9999999999999999984 5 5899999999
Q ss_pred cccCccccCCCcCCCCCCCCcccCCcEEeeCceee-e---------cCccEEEEeEeeEEecCCcccccCCcceeeeecc
Q 006890 503 GSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY-E---------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572 (627)
Q Consensus 503 G~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y-~---------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~l 572 (627)
| |++||.|..++.+ ++.+|+||||||+|||+| . ++.+||||||+|+||++|+ |+|
T Consensus 363 G--l~~he~p~~~~~~-~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~g~------------e~L 427 (444)
T 3cb6_A 363 G--IEFRESSLLVNAK-NPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRSDP------------IVF 427 (444)
T ss_dssp S--SSSCBGGGCCSTT-CCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSSSC------------EET
T ss_pred C--ccccCCccccCCC-CCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCCCc------------eec
Confidence 9 9999998655554 788999999999999999 5 7889999999999999986 999
Q ss_pred cccccccccccccC
Q 006890 573 TWAPYQIKMINLKS 586 (627)
Q Consensus 573 T~~p~~~~~i~~~~ 586 (627)
|.+|++...|+..|
T Consensus 428 t~~p~~l~~Ie~~~ 441 (444)
T 3cb6_A 428 TDSPKAQGDISYFF 441 (444)
T ss_dssp TCCCCSHHHHEECC
T ss_pred ccCCCcHHHHHhhh
Confidence 99999999888766
|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-59 Score=506.73 Aligned_cols=369 Identities=16% Similarity=0.127 Sum_probs=295.7
Q ss_pred cCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCC--CCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhh
Q 006890 164 AGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTD--VPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 164 ~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d--~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
....+.+|++++|+.|+++++|++++++++|++||||++|.+ .+++|. ++++|+.++..++++.+.... +....
T Consensus 75 ~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~~~~-l~~~~- 150 (470)
T 4b28_A 75 LAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKNSPF-LSEFN- 150 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTTCGG-GGTTC-
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecchhhh-hhhhh-
Confidence 345677899999999999999999999999999999999864 344453 688898877777777654321 11110
Q ss_pred hCCeEEeeCCch---------h----HHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC--CeEEecCCccch
Q 006890 242 ESGVEVRDYDAV---------S----SDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS--DKVLLQQSPLAL 306 (627)
Q Consensus 242 ~~~v~v~~y~~~---------~----~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~--~~~~~~~~~i~~ 306 (627)
..--++.++..+ . .+...++ +.+.+++ ...++|++|.. ++..+..|.+ .+++++++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~--~~~~~igve~~--~~~~~~~L~~~~~~~vd~~~~v~~ 225 (470)
T 4b28_A 151 PLVREQRAGADLFYFDRGDKVDVAADVFANEVR-ILLRDHA--PGLRRLAVDKV--MLHGLRALQAQGFEIMDGEEVTEK 225 (470)
T ss_dssp TTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHH-HHHHHHS--TTCCEEEESSC--CHHHHHHHHHTTCEEEEHHHHHHH
T ss_pred hHHHHHHhcCCeeeeccCccccccchhHHHHHH-HHHHHhC--ccCceeeeCcc--hHHHHHHHHcCCCEEEEcHHHHHH
Confidence 111233332110 0 0111111 1111111 13679999975 5666777753 589999999999
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
+|+|||++||+.||+|+++++.|+..+++++++.+. ..++||.|+++.++.++.+ .|
T Consensus 226 lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~----------------------~~~~tE~el~~~l~~~~~~-~G 282 (470)
T 4b28_A 226 ARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVG----------------------DGVTCENDIWAILHSENVR-RG 282 (470)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------------------SSCCBHHHHHHHHHHHHHT-TT
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------------------CCCCCHHHHHHHHHHHHHH-cC
Confidence 999999999999999999999999999999855431 1234999999999987644 34
Q ss_pred CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecce-ecCcccceEEEEecC--CCCHHHHHHHHHHHHHHH
Q 006890 387 FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQ-YQDGTTDITRTFHFG--KPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 387 ~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~-y~gy~~D~tRT~~~G--~p~~e~~~~y~~v~~~~~ 463 (627)
. ..+|.+|+++|+|++.+||.|++ ++|++||+|++|+|++ |.||++|+||||++| +|+++|+++|+.|++++.
T Consensus 283 ~-~~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~ 358 (470)
T 4b28_A 283 G-EWIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIR 358 (470)
T ss_dssp C-CEESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHH
T ss_pred C-CcCCCceeEEcCccccCCCCCCC---ccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3 35788999999999999999875 8999999999999998 899999999999999 699999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCC-----CCCCCcccCCcEEeeCceeee
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISF-----KPRNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~-----~~~~~~l~~Gmv~siEPg~y~ 538 (627)
+++++++| |+++++|+.++++++++.|..+.|++||||| + +||+|.+... ..++.+|+||||||+|||+|.
T Consensus 359 a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~ 434 (470)
T 4b28_A 359 TNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISE 434 (470)
T ss_dssp HHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEEC
T ss_pred HHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeec
Confidence 99999998 9999999999999999988877799999999 8 6999976431 115789999999999999998
Q ss_pred -cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccccc
Q 006890 539 -DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINL 584 (627)
Q Consensus 539 -~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~ 584 (627)
+|.+||||||+|+||++|+ |+||.+|+++.+|.+
T Consensus 435 ~~g~~GvriEd~vlVte~G~------------e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 435 EGGDFSIKLEDQVLITEDGY------------ENLTKYPFDPALMGV 469 (470)
T ss_dssp TTCSCEEEEEEEEEECSSSE------------EECCCCCCCHHHHC-
T ss_pred CCCcEEEEEeeEEEEeCCcC------------eECCCCCCcHHhccC
Confidence 8999999999999999985 999999999988854
|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-58 Score=498.54 Aligned_cols=354 Identities=21% Similarity=0.293 Sum_probs=289.7
Q ss_pred cCCcHHHHHHHHHHHhhccCCcEEEEecC---------------CccceEEccccCCCCCCcceeEEEEEEC-----Cce
Q 006890 164 AGSSVVEKLKELREKLTNEKARGIIITTL---------------DEVAWLYNIRGTDVPYCPVVHAFAIVTT-----NAA 223 (627)
Q Consensus 164 ~G~~~~~ri~~lr~~m~~~~~d~lll~~~---------------dni~wLtg~rg~d~~~~P~~~a~~lv~~-----~~~ 223 (627)
+..++.+|++++++.|++.+ ++++++++ .|+.||||+... .++++++. +++
T Consensus 4 ~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~--------~~~lvi~~~~~~~~~~ 74 (440)
T 2v3z_A 4 SRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEP--------EAVLVLIKSDDTHNHS 74 (440)
T ss_dssp CHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCS--------SCEEEEEECSSSCEEE
T ss_pred CHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCC--------CEEEEEEecCCCCceE
Confidence 45678999999999999877 78888876 577888877532 36777764 468
Q ss_pred EEEEeCCCCCHHH--------HHhhhhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCc------HHH
Q 006890 224 FLYVDKRKVSSEV--------ISFLKESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCS------YAL 288 (627)
Q Consensus 224 ~L~v~~~~~~~~~--------~~~l~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~------~~~ 288 (627)
+||++..+...++ +......++ .+.+++++.+.+..+.. ..++|+++.+..+ ...
T Consensus 75 ~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~i~~~~~~~~~~~~~~~~~ 144 (440)
T 2v3z_A 75 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN----------GLDVVYHAQGEYAYADVIVNSA 144 (440)
T ss_dssp EEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHT----------TCSEEECCTTSCHHHHHHHHHH
T ss_pred EEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHc----------CCCEEEEeCCcccchhHHHHHH
Confidence 9999987644322 111111233 45677777666655532 2458898876422 112
Q ss_pred Hhhc---------CCCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 006890 289 YSKL---------NSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKE 359 (627)
Q Consensus 289 ~~~l---------~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 359 (627)
+..+ +..++++..+++..+|+|||++||+.||+|+++++.|+.++++++
T Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i---------------------- 202 (440)
T 2v3z_A 145 LEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC---------------------- 202 (440)
T ss_dssp HHHHHTCGGGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHhhhcccccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----------------------
Confidence 2222 234788888999999999999999999999999999999998875
Q ss_pred cccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceE
Q 006890 360 KKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDIT 439 (627)
Q Consensus 360 ~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~t 439 (627)
++|+||.++++.++.... ..|+.+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|.||++|+|
T Consensus 203 -----~~G~tE~el~~~~~~~~~-~~G~~~~~f~~iv~~G~n~~~~H~~~~~---~~l~~gd~vliD~G~~~~gy~sD~t 273 (440)
T 2v3z_A 203 -----RPGMFEYHLEGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDIT 273 (440)
T ss_dssp -----CTTCBHHHHHHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEE
T ss_pred -----cCCCcHHHHHHHHHHHHH-HcCCCcCCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEeeEEECCEEEeeE
Confidence 789999999999977653 4577788999999999999999999875 8999999999999999999999999
Q ss_pred EEEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHH----HcCC----------------CCcccc
Q 006890 440 RTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW----KYGL----------------DYRHGT 498 (627)
Q Consensus 440 RT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~----~~G~----------------~~~h~~ 498 (627)
|||++ |+|+++|+++|+.|++++.+++++++| |+++.+|+.++++.+. +.|+ .|.|++
T Consensus 274 RT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~ 352 (440)
T 2v3z_A 274 RTFPVNGKFTQAQREIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGL 352 (440)
T ss_dssp EEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCS
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCC
Confidence 99999 999999999999999999999999998 9999999999988874 3443 479999
Q ss_pred cccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecC---------ccEEEEeEeeEEecCCcccccCCcceeee
Q 006890 499 GHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDG---------NFGIRLENVLVVTDANTKFNFGDKGYLSF 569 (627)
Q Consensus 499 GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~---------~~GvriEd~v~V~~~g~~~~~~~~~~~~f 569 (627)
||||| |++||.|.+... ++.+|+||||||+|||+|.++ .+||||||+|+||++|+
T Consensus 353 GHgiG--l~~he~p~~~~~--~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~G~------------ 416 (440)
T 2v3z_A 353 SHWLG--LDVHDVGVYGQD--RSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGN------------ 416 (440)
T ss_dssp CCBCS--SSSSCCSCCCGG--GCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETTEE------------
T ss_pred CCcCC--cccccCCCcCCC--CCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCCcC------------
Confidence 99999 999999987433 568999999999999999997 68999999999999985
Q ss_pred eccc-ccccccccccc
Q 006890 570 EHIT-WAPYQIKMINL 584 (627)
Q Consensus 570 e~lT-~~p~~~~~i~~ 584 (627)
|+|| .+|++...|+.
T Consensus 417 e~LT~~~p~~~~~Ie~ 432 (440)
T 2v3z_A 417 ENLTASVVKKPEEIEA 432 (440)
T ss_dssp EESSTTSCCSHHHHHH
T ss_pred eECCcccCCCHHHHHH
Confidence 9999 59998766643
|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-56 Score=478.65 Aligned_cols=363 Identities=20% Similarity=0.247 Sum_probs=292.2
Q ss_pred CcHHHHHHHHHHHhhccCC-------------cEEE-EecCCccceEEccccCCCCCCcceeEEEEEEC----CceEEEE
Q 006890 166 SSVVEKLKELREKLTNEKA-------------RGII-ITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTT----NAAFLYV 227 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~-------------d~ll-l~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~----~~~~L~v 227 (627)
..+.+|.++|.+.|...++ |... .....|+.||||+.+.+ +++++.. ++.+||+
T Consensus 4 ~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~lfv 75 (427)
T 3ig4_A 4 KFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETLFI 75 (427)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEEEe
Confidence 3578999999999975433 2211 22234689999998776 5677643 2578999
Q ss_pred eCCCCCHH--------HHHhhhhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCC--------CcHHHHh
Q 006890 228 DKRKVSSE--------VISFLKESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNS--------CSYALYS 290 (627)
Q Consensus 228 ~~~~~~~~--------~~~~l~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~--------~~~~~~~ 290 (627)
++.....+ .+......++ .+.+.+++.+.+..+..+ .+.++|+++.+. .++..++
T Consensus 76 ~~~~~~~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~~~l~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (427)
T 3ig4_A 76 EKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFT--------ENVKHLYLDLECREWKGTETKTLAFAK 147 (427)
T ss_dssp CCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTT--------TCCCEEEECCCCCCTTCCCCHHHHHHH
T ss_pred cCCCccceEEeCCCCcHHHHHhcCCCCEEEEhhhHHHHHHHHHhc--------CCCcEEEEeCCccccccccccCHHHHH
Confidence 87332111 1111122345 355666666666555421 135688888642 2334443
Q ss_pred ----hcCCCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 006890 291 ----KLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTV 366 (627)
Q Consensus 291 ----~l~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (627)
.++..++++.+..+..+|+|||++||+.||+|+++++.|+.++++.+ ++
T Consensus 148 ~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i---------------------------~p 200 (427)
T 3ig4_A 148 HVREQYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHA---------------------------KA 200 (427)
T ss_dssp HHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CS
T ss_pred HHHhhCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cC
Confidence 45566899999999999999999999999999999999999888764 79
Q ss_pred CcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-C
Q 006890 367 KLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-G 445 (627)
Q Consensus 367 g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G 445 (627)
|+||.|+++.++.... ..|..+++|++|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++ |
T Consensus 201 G~tE~el~~~~~~~~~-~~G~~~~~f~~ivasG~n~~~~H~~~~~---~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G 276 (427)
T 3ig4_A 201 DMMEYELEAQFDFTLK-SSGIKHHAFNTILASGKNATVLHYEDND---AQIQNGDLVLLDLGAQKDYYNADISYTFPANG 276 (427)
T ss_dssp SEEHHHHHHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SEECTTCEEEEEECEEETTEECCEEEEEETTS
T ss_pred CCCHHHHHHHHHHHHH-HcCCCCCCCCCEEEECccccccccCccc---ccCCCCCEEEEEeeeEECcEEEEEEEEEecCC
Confidence 9999999999987663 4577788999999999999999999876 899999999999999999999999999999 8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHc----CC---------CCcccccccccccCccccCC
Q 006890 446 KPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKY----GL---------DYRHGTGHGVGSYLNVHEGP 512 (627)
Q Consensus 446 ~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~----G~---------~~~h~~GHgvG~~l~vhE~P 512 (627)
++|++|+++|+.|++++.+++++++| |+++.+|+.++++++++. |+ .|.|++||||| |++||.|
T Consensus 277 ~~s~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~ 353 (427)
T 3ig4_A 277 TFSSRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVG 353 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCC
Confidence 99999999999999999999999998 999999999999999886 32 58999999999 9999987
Q ss_pred CcCCCCCCCCcccCCcEEeeCceeeecCcc-EEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccccccCCCHH
Q 006890 513 QSISFKPRNVPIHASMTATDEPGYYEDGNF-GIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMINLKSLTPE 590 (627)
Q Consensus 513 ~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~-GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i~~~~l~~~ 590 (627)
. . .+.+|+||||||||||+|.++.+ ||||||+|+||++|+ |+||. +|.+.+.|+.-| ...
T Consensus 354 ~----~-~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~G~------------e~LT~~~pk~~~~IE~~m-~~~ 415 (427)
T 3ig4_A 354 T----Y-KDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKDGH------------ENLSKDIIREVEEIEEFM-REN 415 (427)
T ss_dssp C----C-TTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSSSE------------EETTTTSCCSHHHHHHHH-HHH
T ss_pred C----C-CCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCCcC------------eECCCCCCCCHHHHHHHH-ccC
Confidence 5 2 67899999999999999998864 999999999999997 99996 899999998654 689
Q ss_pred HHHHHH
Q 006890 591 EIDWLN 596 (627)
Q Consensus 591 e~~~ln 596 (627)
|+.|||
T Consensus 416 ~~~~~~ 421 (427)
T 3ig4_A 416 NVNVKQ 421 (427)
T ss_dssp CTTC--
T ss_pred cccccc
Confidence 999999
|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=462.36 Aligned_cols=360 Identities=23% Similarity=0.345 Sum_probs=273.1
Q ss_pred cccCCcHHHHHHHHHHHhhccCC----cEEEEecCC-----------------ccceEEccccCCCCCCcceeEEEEEE-
Q 006890 162 EFAGSSVVEKLKELREKLTNEKA----RGIIITTLD-----------------EVAWLYNIRGTDVPYCPVVHAFAIVT- 219 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~----d~lll~~~d-----------------ni~wLtg~rg~d~~~~P~~~a~~lv~- 219 (627)
.++-.++.+|+++|++.|++.+. +++++.+.. |+.||||++..+ +++++.
T Consensus 18 ~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~~ 89 (494)
T 2iw2_A 18 KVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVIDV 89 (494)
T ss_dssp CEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEEc
Confidence 46678899999999999987743 588885432 578999987554 566774
Q ss_pred -CCceEEEEeCCCCCHHHHHhh----------hhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEE----cCCC
Q 006890 220 -TNAAFLYVDKRKVSSEVISFL----------KESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWA----DPNS 283 (627)
Q Consensus 220 -~~~~~L~v~~~~~~~~~~~~l----------~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~i----D~~~ 283 (627)
.++++||++..+...+ .+. ...++ .+.+++.+.+.+... +.+++++ +...
T Consensus 90 ~~~~~~L~~~~~~~~~~--~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------------~~~~i~~~~g~~~~~ 155 (494)
T 2iw2_A 90 DTGKSTLFVPRLPASHA--TWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQ------------KPSVLLTLRGVNTDS 155 (494)
T ss_dssp TTCCEEEEECCCCGGGT--TTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHT------------CCSCEECCCCBCTTT
T ss_pred cCCeEEEEECCCCHHHh--hhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhc------------CCCeEEEecCccccc
Confidence 4789999987654321 111 00111 123344443333322 1223433 2110
Q ss_pred ---CcHHHHhhcCC--CeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 006890 284 ---CSYALYSKLNS--DKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATK 358 (627)
Q Consensus 284 ---~~~~~~~~l~~--~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 358 (627)
.....+..+.. ...++....+..+|+|||++||+.||+|+++++.++.++++++
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i--------------------- 214 (494)
T 2iw2_A 156 GSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV--------------------- 214 (494)
T ss_dssp CCBCCCCCCTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------
T ss_pred cccccHhhhhhhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------
Confidence 00000111111 1233444678999999999999999999999999999888864
Q ss_pred ccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCC-CCccCCCCCCCeEEEeecceecCcccc
Q 006890 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQ-SETCAEMDPNSIYLCDSGAQYQDGTTD 437 (627)
Q Consensus 359 ~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~-~~~~~~l~~gd~vliD~g~~y~gy~~D 437 (627)
++|+||.++++.++....+..|+.+.+|++|+++|+|++++||.++ ..++++|++||+|++|+|++|.||++|
T Consensus 215 ------~~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sD 288 (494)
T 2iw2_A 215 ------KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASD 288 (494)
T ss_dssp ------CTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCC
T ss_pred ------cCCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEE
Confidence 7899999999999876644447778899999999999999999764 223589999999999999999999999
Q ss_pred eEEEEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHH----cCC----------------CCcc
Q 006890 438 ITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWK----YGL----------------DYRH 496 (627)
Q Consensus 438 ~tRT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~----~G~----------------~~~h 496 (627)
+||||++ |++|++|+++|+.|++++.+++++++| |+++.+|+.++++++++ .|+ .|+|
T Consensus 289 itRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H 367 (494)
T 2iw2_A 289 ITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPH 367 (494)
T ss_dssp EEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCS
T ss_pred eeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCC
Confidence 9999999 899999999999999999999999998 99999999999988764 343 3789
Q ss_pred cccccccccCccccCCCcC------------CCCCCCCcccCCcEEeeCceeeec-------------------------
Q 006890 497 GTGHGVGSYLNVHEGPQSI------------SFKPRNVPIHASMTATDEPGYYED------------------------- 539 (627)
Q Consensus 497 ~~GHgvG~~l~vhE~P~~~------------~~~~~~~~l~~Gmv~siEPg~y~~------------------------- 539 (627)
++||||| |++||.|... +.+ ++.+|+||||||||||+|.+
T Consensus 368 ~~GHgiG--l~vHd~~~~~~~~~~~~~p~~~~~~-~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~ 444 (494)
T 2iw2_A 368 GLGHFLG--IDVHDVGGYPEGVERIDEPGLRSLR-TARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRF 444 (494)
T ss_dssp CSCCBCS--SSSSCSCSSCTTCCCCCSTTGGGCS-CCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHH
T ss_pred CCcCCCC--cccccCCCcccccccccccccccCC-CCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhh
Confidence 9999999 9999943210 111 46799999999999999974
Q ss_pred -CccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccccccC
Q 006890 540 -GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKS 586 (627)
Q Consensus 540 -~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~~~ 586 (627)
|.+||||||+|+||++|+ |+||.+|.+...|+..|
T Consensus 445 ~g~gGvRiED~vlVte~G~------------e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 445 RGFGGVRIEEDVVVTDSGI------------ELLTCVPRTVEEIEACM 480 (494)
T ss_dssp TTCCEEECBEEEEECSSSE------------EECCCCCCSHHHHHHHH
T ss_pred CCCCEEEeeeEEEEcCCcC------------eECCCCCCcHHHHHHHH
Confidence 678999999999999996 99999999887776555
|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-52 Score=448.28 Aligned_cols=351 Identities=20% Similarity=0.224 Sum_probs=263.6
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEc-----cccCC-C-CCCcc---eeEEEEEE-CCceEEEEeCCC-C----
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYN-----IRGTD-V-PYCPV---VHAFAIVT-TNAAFLYVDKRK-V---- 232 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg-----~rg~d-~-~~~P~---~~a~~lv~-~~~~~L~v~~~~-~---- 232 (627)
+.+.+|+++.|++.+.|++++.+..++.|++| ||... . .++++ --+++++. .+++.||+.... .
T Consensus 13 ~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~~~ 92 (451)
T 3rva_A 13 EELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKV 92 (451)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhhcc
Confidence 45678899999999999999999999999987 44321 0 01111 12677775 346677766431 0
Q ss_pred CHHHHHh-hhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcC
Q 006890 233 SSEVISF-LKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 233 ~~~~~~~-l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK 311 (627)
.....+. ... ..+..+....+ +. ..+.. ...++.+.......+.+..+....+++..+.+..+|+||
T Consensus 93 ~~~~~~~~~~~--~~v~~~~~~~~----~~-~~l~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iK 160 (451)
T 3rva_A 93 PPEPNDFWTDS--FDIKLLQQADA----VE-KFLPY-----DKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYK 160 (451)
T ss_dssp CCSCCSTTGGG--SEEEEESSGGG----GG-GGSCS-----CGGGEEEESSCHHHHHHHTCSCBSCHHHHHHHHHHHTSC
T ss_pred ccCcchhHHhc--cCeEEEecHHH----HH-HHHhh-----ccCceEEEccCcCHHHhhhhcccCchHHHHHHHHHHhcC
Confidence 0000000 111 23333322211 11 11211 112233332223333344444345667778899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCc
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLS 391 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~ 391 (627)
|++||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 161 s~~EI~~mr~A~~ia~~a~~~~~~~i---------------------------~pG~tE~el~~~~~~~~--~~g~~~~~ 211 (451)
T 3rva_A 161 TDYELDCMREANKLAVAGHKAAEQAF---------------------------REGKSEFDINLAYAAAS--RQGDNDVP 211 (451)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HTTCCHHHHHHHHHHHH--TCCTTTSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhh---------------------------hcCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 99999999999999999999888876 58999999999876643 34667889
Q ss_pred CCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCC--CHHHHHHHHHHHHHHHHHHhcc
Q 006890 392 FPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKP--SAHEKACYTAVLKGHIALGNAV 469 (627)
Q Consensus 392 f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p--~~e~~~~y~~v~~~~~~~~~~~ 469 (627)
|++|+++|+|++++||.|++. +.+++||+|++|+|++|+||++|+||||++|++ +++++++|+.|++++.++++++
T Consensus 212 f~~IVasG~naa~~H~~~~~~--~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~i 289 (451)
T 3rva_A 212 YTSIVALNEHASILHYMQCDT--VAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSL 289 (451)
T ss_dssp SCCEEEEGGGGGCTTCCCCCS--SCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEECCcccccCCCCCCC--cccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999861 347899999999999999999999999999987 8899999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHH-----------------HcCC---CCcccccccccccCccccCCCcCCCC-----------
Q 006890 470 FPNGTCGHTLDILARLPLW-----------------KYGL---DYRHGTGHGVGSYLNVHEGPQSISFK----------- 518 (627)
Q Consensus 470 ~p~G~~~~~l~~~a~~~l~-----------------~~G~---~~~h~~GHgvG~~l~vhE~P~~~~~~----------- 518 (627)
+| |+++.+|+.+++++++ +.|+ .|+|++||||| |++||.|.+....
T Consensus 290 kP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~~~ 366 (451)
T 3rva_A 290 KP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPDDH 366 (451)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCTTC
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCcccccccccccccccccc
Confidence 98 9999999999999876 5565 58999999999 9999998764310
Q ss_pred ---CCCCcccCCcEEeeCceeeec-------------------------CccEEEEeEeeEEecCCcccccCCcceeeee
Q 006890 519 ---PRNVPIHASMTATDEPGYYED-------------------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570 (627)
Q Consensus 519 ---~~~~~l~~Gmv~siEPg~y~~-------------------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe 570 (627)
.+..+|+||||||||||+|++ |.+||||||+|+||++|+ |
T Consensus 367 ~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G~------------e 434 (451)
T 3rva_A 367 PFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKN------------E 434 (451)
T ss_dssp TTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE------------E
T ss_pred ccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCCcc------------e
Confidence 145789999999999999983 567999999999999997 8
Q ss_pred ccccccc
Q 006890 571 HITWAPY 577 (627)
Q Consensus 571 ~lT~~p~ 577 (627)
+||..|.
T Consensus 435 ~LT~~~~ 441 (451)
T 3rva_A 435 NMTRDLD 441 (451)
T ss_dssp EHHHHTT
T ss_pred ECCCCCC
Confidence 9997654
|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=438.41 Aligned_cols=351 Identities=19% Similarity=0.190 Sum_probs=260.1
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEc-----cccCC-C-CCCcc---eeEEEEEE-CCceEEEEeCC-C-CC--
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYN-----IRGTD-V-PYCPV---VHAFAIVT-TNAAFLYVDKR-K-VS-- 233 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg-----~rg~d-~-~~~P~---~~a~~lv~-~~~~~L~v~~~-~-~~-- 233 (627)
+.+.+|+++.|++.+.|++++.+..++.|++| ||... . .++++ --+++++. .+++.||+... + +.
T Consensus 13 ~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g~ 92 (517)
T 3l24_A 13 ATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHKV 92 (517)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhcc
Confidence 35678888999999999999999999999887 44331 0 01111 12677775 34667766542 1 00
Q ss_pred -HHHHH-hhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcC
Q 006890 234 -SEVIS-FLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 234 -~~~~~-~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK 311 (627)
...++ +... ..+..+....+ +. ..+.. ...++.+.......+.+..+....+++..+.+..+|++|
T Consensus 93 ~~~~~~~~~~~--~~v~~~~~~~~----~~-~~L~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iK 160 (517)
T 3l24_A 93 PDEPNEYWADY--FDIELLVKPDQ----VE-KLLPY-----DKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYK 160 (517)
T ss_dssp CCCCCSGGGGG--SEEEEESSGGG----CG-GGSCS-----CCTTEEEESSCHHHHHHHTCCCBSCHHHHHHHHHHHTSC
T ss_pred ccCchhhhhhc--cCeEEEcCHHH----HH-HHHhh-----ccCceEEEcCCcCHHHhhhhccCCchhHHHHHHHHHhcC
Confidence 00000 0111 22333222211 11 11211 112233332223333344444445667778899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCc
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLS 391 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~ 391 (627)
|++||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 161 s~~EIe~mR~A~~ia~~a~~~~~~~i---------------------------kpG~tE~el~~~~~~~~--~~g~~~~s 211 (517)
T 3l24_A 161 TQYELACMREANKIAVQGHKAARDAF---------------------------FQGKSEFEIQQAYLLAT--QHSENDNP 211 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HTTCCHHHHHHHHHHHH--TCCGGGSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 99999999999999999999888776 58999999998876543 34556789
Q ss_pred CCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCC
Q 006890 392 FPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFP 471 (627)
Q Consensus 392 f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p 471 (627)
|++|+++|+|++++||.|++. +.+++||+|++|+|++|+||++|+||||++|++ ++++++|+.|++++.+++++++|
T Consensus 212 f~~IVasG~naa~~H~~p~~~--~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikP 288 (517)
T 3l24_A 212 YGNIVALNENCAILHYTHFDR--VAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAP 288 (517)
T ss_dssp SCCEEEEGGGGGCTTCCCCCS--SCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCT
T ss_pred cCCEEEEccccccccCCCCCC--ccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999761 347999999999999999999999999999975 78999999999999999999998
Q ss_pred CCcccchHHHHHHHHHH-----------------HcCC---CCcccccccccccCccccCCCcCCCC-------------
Q 006890 472 NGTCGHTLDILARLPLW-----------------KYGL---DYRHGTGHGVGSYLNVHEGPQSISFK------------- 518 (627)
Q Consensus 472 ~G~~~~~l~~~a~~~l~-----------------~~G~---~~~h~~GHgvG~~l~vhE~P~~~~~~------------- 518 (627)
|+++.+|+.++++.+. +.|+ +|+|++||||| |++||.|.+....
T Consensus 289 -Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~p~ 365 (517)
T 3l24_A 289 -GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGHPF 365 (517)
T ss_dssp -TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC---------------
T ss_pred -CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCcccccccccccccccccccc
Confidence 9999999999998775 4454 68999999999 9999999764310
Q ss_pred -CCCCcccCCcEEeeCceeeec-------------------------CccEEEEeEeeEEecCCcccccCCcceeeeecc
Q 006890 519 -PRNVPIHASMTATDEPGYYED-------------------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572 (627)
Q Consensus 519 -~~~~~l~~Gmv~siEPg~y~~-------------------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~l 572 (627)
.++.+|+||||||||||+|++ |.+||||||+|+||++|+ |+|
T Consensus 366 l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~G~------------e~L 433 (517)
T 3l24_A 366 LRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSL------------ENM 433 (517)
T ss_dssp CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE------------EEH
T ss_pred CCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCCcC------------eeC
Confidence 146789999999999999983 567999999999999997 888
Q ss_pred cc-cccc
Q 006890 573 TW-APYQ 578 (627)
Q Consensus 573 T~-~p~~ 578 (627)
|. +|.+
T Consensus 434 T~~~~~~ 440 (517)
T 3l24_A 434 TRELRLR 440 (517)
T ss_dssp HHHTTCC
T ss_pred CCccchh
Confidence 84 5554
|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=401.06 Aligned_cols=234 Identities=21% Similarity=0.182 Sum_probs=208.6
Q ss_pred EecCCccchhh--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHH
Q 006890 298 LLQQSPLALAK--AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSD 375 (627)
Q Consensus 298 ~~~~~~i~~~r--~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~ 375 (627)
.+..+.+.++| +|||++||+.||+|+++++.++..+++++ ++|+||.|+++
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~tE~el~~ 72 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAA---------------------------KAGVSTLELDQ 72 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHH
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHH
Confidence 34457888999 99999999999999999999999887764 78999999999
Q ss_pred HHHHHHHhhcCCCC-----CcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHH
Q 006890 376 KLESFRASKEHFRG-----LSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAH 450 (627)
Q Consensus 376 ~l~~~~~~~~g~~~-----~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e 450 (627)
.++.++.+. |... .+|++|+++|+|++++||.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++
T Consensus 73 ~~~~~~~~~-G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~ 149 (286)
T 3tav_A 73 VAESVIREA-GAVPSFLGYHGFPASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPS 149 (286)
T ss_dssp HHHHHHHHT-TCEETTTTGGGCCSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHH
T ss_pred HHHHHHHHc-CCcccccccCCCCCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHH
Confidence 999877543 4322 4799999999999999999972 3899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHH----HHc--CCC-CcccccccccccCccccCCCcCCCC-C-CC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL----WKY--GLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l----~~~--G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~ 521 (627)
|+++|+.+++++.+++++++| |+++++|+.++++++ ++. |+. +.|++||||| +++||+|.+.... + ++
T Consensus 150 ~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~ 226 (286)
T 3tav_A 150 DEALSEATRLSMEAGIAAMIP-GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKG 226 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCC
Confidence 999999999999999999998 999999999999999 999 874 6899999999 9999999875431 1 67
Q ss_pred CcccCCcEEeeCceeeec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeecccccc
Q 006890 522 VPIHASMTATDEPGYYED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAP 576 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p 576 (627)
.+|++||||++|||+|.+ |.+|+|+||+|+||++|+ |.||..|
T Consensus 227 ~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt~~G~------------e~LT~~p 286 (286)
T 3tav_A 227 PLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVTEAGP------------RILTMRP 286 (286)
T ss_dssp SBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECCTTSC------------EESSCCC
T ss_pred CCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEECCCcc------------eeCCCCC
Confidence 899999999999999975 478999999999999998 8999776
|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=396.59 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=206.3
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
||.|||++||+.||+|+++++.++..+++.+ +||+||.|+++.++.+..+. |
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~i---------------------------kpG~tE~el~~~~~~~~~~~-G 52 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFI---------------------------KPGITSWDIEVFVRDFIESH-G 52 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHT-T
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------cCCCCHHHHHHHHHHHHHHc-C
Confidence 7899999999999999999999998887764 79999999999999876443 3
Q ss_pred CC-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 387 FR-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 387 ~~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
.. ..+|++++++|.|++.+||.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++|+++|+.++++
T Consensus 53 ~~~~~~~~~~~~~~v~~g~~~~~~H~~~~~---~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a 129 (264)
T 3tb5_A 53 GVAAQIGYEGYKYATCCSINDEICHGFPRK---KVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKA 129 (264)
T ss_dssp CEETTTTGGGCCCSEEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CCcccccccCCCcceEECCcccccCCCCCC---ccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHH
Confidence 22 24678999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++++|+.++++.+.+.|+. +.|++||||| +.+||.|.+..... ++.+|+||||||+|||+|.
T Consensus 130 ~~~~i~~~kp-G~~~~di~~a~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~ 206 (264)
T 3tb5_A 130 LYLGIEQAQV-GNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNT 206 (264)
T ss_dssp HHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES
T ss_pred HHHHHhhhCC-CCCHHHHHHHHHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEc
Confidence 9999999998 999999999999999999994 6899999999 99999998754322 4578999999999999996
Q ss_pred c-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccccccc
Q 006890 539 D-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMIN 583 (627)
Q Consensus 539 ~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~ 583 (627)
+ +.+||||||+|+||++|+ |+||..|.++..|+
T Consensus 207 ~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~~G~------------e~LT~~p~el~~ie 256 (264)
T 3tb5_A 207 GTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGP------------RILTSQGEELTYLE 256 (264)
T ss_dssp SCSCEEECTTSSCEEETTCCCEEECCEEEECCTTCC------------EETTCCSSTTCC--
T ss_pred CCCceEEcCCCCeEEecCCccEEEeceEEEEcCCcC------------EECCCCCcchhhhh
Confidence 3 456999999999999997 99999997766554
|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=394.89 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=204.6
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.|++|||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~pG~tE~el~~~~~~~~~~~- 55 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHV---------------------------KPNVTTNSLNDLCHNFITSH- 55 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGC---------------------------CTTCBHHHHHHHHHHHHHHT-
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------CCCCcHHHHHHHHHHHHHHc-
Confidence 47999999999999999999999998876653 79999999999999877543
Q ss_pred CCCC-----CcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 386 HFRG-----LSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 386 g~~~-----~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
|... .+|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++
T Consensus 56 G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~ 132 (262)
T 3mx6_A 56 NAIPAPLNYKGFPKSICTSINHVVCHGIPND---KPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYD 132 (262)
T ss_dssp TCEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCcceEecccccccCCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 3221 4699999999999999999985 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYY 537 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y 537 (627)
++.+++++++| |+++.+|+.++++++++.|+. +.|++||||| +++||.|.+.+.. + ++.+|++||||++|||+|
T Consensus 133 a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy 209 (262)
T 3mx6_A 133 AMMKGIEVVRP-GAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMIN 209 (262)
T ss_dssp HHHHHHHTCST-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEE
Confidence 99999999998 999999999999999999995 7899999999 9999999875431 1 678999999999999999
Q ss_pred ecCccEEEE-------------------eEeeEEecCCcccccCCcceeeeecccccccccc
Q 006890 538 EDGNFGIRL-------------------ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 538 ~~~~~Gvri-------------------Ed~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~ 580 (627)
. +.+|+|+ ||+|+||++|+ |+||..|.++.
T Consensus 210 ~-g~~gvri~~~d~w~~~~~~~~~~~~~Ed~v~Vt~~G~------------e~LT~~p~~l~ 258 (262)
T 3mx6_A 210 A-GNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGF------------EIFTLSPKKLD 258 (262)
T ss_dssp S-SCSCEEECTTTSCCEEETTCCCEEECBEEEEECSSSE------------EESCCCTTCCC
T ss_pred c-CCCeEEEecCCCceEEecCCCceeeeceEEEECCCcC------------eECCCCCcccC
Confidence 7 7788877 99999999997 99999988754
|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-48 Score=395.23 Aligned_cols=219 Identities=19% Similarity=0.232 Sum_probs=199.2
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+.+
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i---------------------------~pG~tE~el~~~~~~~~~~~G 89 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV---------------------------APGVTTDELDRIAHEYLVDNG 89 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------CCCCcHHHHHHHHHHHHHHcC
Confidence 69999999999999999999999999887764 789999999999998775433
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
... ..+|++++++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.++++
T Consensus 90 ~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a 166 (285)
T 3pka_A 90 AYPSTLGYKGFPKSCCTSLNEVICHGIPDS---TVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREA 166 (285)
T ss_dssp CEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CccccccccCCCCceEecccceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 14799999999999999999975 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++++|+.++++++++.|+. +.|++||||| +++||+|.+.... + ++.+|++||||++|||+|.
T Consensus 167 ~~~~i~~~kp-G~~~~di~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~ 243 (285)
T 3pka_A 167 TMRAINTVKP-GRALSVIGRVIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINL 243 (285)
T ss_dssp HHHHHHTCCT-TSBTTHHHHHHHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEES
T ss_pred HHHHHHHHhc-CCcHHHHHHHHHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEc
Confidence 9999999998 999999999999999999995 8999999999 9999999875321 1 5789999999999999997
Q ss_pred c-----------------CccEEEEeEeeEEecCCc
Q 006890 539 D-----------------GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 539 ~-----------------~~~GvriEd~v~V~~~g~ 557 (627)
+ |.+|+|+||+|+||++|+
T Consensus 244 ~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt~~G~ 279 (285)
T 3pka_A 244 GALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGV 279 (285)
T ss_dssp SCSCEEECTTSCCEEETTCCCEEECBEEEEECSSSE
T ss_pred CCCceeecCCCceEEecCCCcEEEEeeEEEECCCcC
Confidence 4 578999999999999997
|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=398.82 Aligned_cols=232 Identities=19% Similarity=0.225 Sum_probs=208.0
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+++|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+.+
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~i---------------------------kpGvTE~El~~~~~~~~~~~G 151 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLV---------------------------SPGVTTDEIDRKVHEFIIKNN 151 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999998887654 799999999999998775433
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecC---CCCHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFG---KPSAHEKACYTAV 458 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G---~p~~e~~~~y~~v 458 (627)
... +.+|++|+++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++| +++++++++|+++
T Consensus 152 a~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~---r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v 228 (368)
T 3s6b_A 152 AYPSTLNYYKFPKSCCTSVNEIVCHGIPDY---RPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETC 228 (368)
T ss_dssp CEETTTTGGGCCSSEEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHH
T ss_pred CccccccccCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 221 24799999999999999999975 8999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCce
Q 006890 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPG 535 (627)
Q Consensus 459 ~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg 535 (627)
++++.+++++++| |+++++|+.++++++++.|+. +.|++||||| +++||.|.+..+.. ...+|++|||||||||
T Consensus 229 ~ea~~aai~~ikP-G~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPg 305 (368)
T 3s6b_A 229 YFSLMEAIKKCKP-GMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPM 305 (368)
T ss_dssp HHHHHHHHHHCCT-TCBTHHHHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCE
T ss_pred HHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCe
Confidence 9999999999998 999999999999999999995 8899999999 99999998865321 4578999999999999
Q ss_pred eee-----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccc
Q 006890 536 YYE-----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMI 582 (627)
Q Consensus 536 ~y~-----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i 582 (627)
+|. +|.+|+|+||+|+||++|+ |.||. .|.+..++
T Consensus 306 iy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVTe~G~------------EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 306 INQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLITNNGV------------EILTKRTQDSPPLG 358 (368)
T ss_dssp EESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEE------------EETTCCCTTCCCCS
T ss_pred EEcCcccccccCCCceeEeeCCccEEEEeEEEEEcCCcC------------eECCCCCCCCcCce
Confidence 997 4678999999999999997 89994 66666555
|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=386.48 Aligned_cols=228 Identities=19% Similarity=0.227 Sum_probs=204.3
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHH-HHhhc
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESF-RASKE 385 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~-~~~~~ 385 (627)
||++||++||+.||+|+++++.++..+++. +++|+||.|+++.++.+ +.+ .
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~---------------------------i~~G~te~el~~~~~~~~~~~-~ 52 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPY---------------------------VKPGVSTGELDRICNDYIVNE-Q 52 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGG---------------------------CSTTCBHHHHHHHHHHHHHHT-S
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHHHH-h
Confidence 689999999999999999999998776543 37899999999999988 643 3
Q ss_pred CCC-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 386 HFR-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 386 g~~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
|.. ..+|++++++|.|++++||.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++
T Consensus 53 g~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~ 130 (263)
T 2gg2_A 53 HAVSACLGYHGYPKSVCISINEVVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQE 130 (263)
T ss_dssp CCEESSTTGGGCCSSSEEEETTEEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred CCccccccccCCCcceEecccccccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 432 24799999999999999999964 37899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYY 537 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y 537 (627)
++.+++++++| |+++++|+.++++.+++.|+. +.|++||||| +++||.|.+.+.. + ++.+|++|||||+|||+|
T Consensus 131 a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~ 207 (263)
T 2gg2_A 131 SLYLALRMVKP-GINLREIGAAIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVN 207 (263)
T ss_dssp HHHHHHHHCST-TCBHHHHHHHHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEE
Confidence 99999999998 999999999999999999995 7899999999 9999999876432 1 568999999999999999
Q ss_pred ec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccc
Q 006890 538 ED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 538 ~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
.+ +.+|+|+||+|+||++|+ |.||..|.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G~------------e~LT~~p~~l 254 (263)
T 2gg2_A 208 AGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGC------------EILTLRKDDT 254 (263)
T ss_dssp SSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEE------------EESSCCTTCC
T ss_pred cCCCceEEcCCCceEEecCCCeEEEEEEEEEECCCcc------------EEeCCCCccc
Confidence 73 467999999999999996 8999988764
|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-47 Score=385.47 Aligned_cols=220 Identities=23% Similarity=0.254 Sum_probs=196.9
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh
Q 006890 305 ALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK 384 (627)
Q Consensus 305 ~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~ 384 (627)
..||++||++||+.||+|+++++.++..+++. ++||+||.|+++.++.++.+.
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~---------------------------i~pG~te~el~~~~~~~~~~~ 63 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKV---------------------------IVPGKTAWDVETLVLEIFKKL 63 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGG---------------------------CSTTCBHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------CCCCCcHHHHHHHHHHHHHHc
Confidence 46999999999999999999999988766543 378999999999999877544
Q ss_pred cC---CCC-CcCCcccccCCCcccccccCCCCccCC-CCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHH
Q 006890 385 EH---FRG-LSFPTISSVGPNAAIMHYSPQSETCAE-MDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVL 459 (627)
Q Consensus 385 ~g---~~~-~~f~~i~~~G~n~a~~h~~~~~~~~~~-l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~ 459 (627)
+. +.+ .+|++++++|+|++++||.|++ ++ |++||+|++|+|++|+||++|+||||++|+|+++|+++|+.++
T Consensus 64 G~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~ 140 (262)
T 1o0x_A 64 RVKPAFKGYGGYKYATCVSVNEEVVHGLPLK---EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTR 140 (262)
T ss_dssp TCEESSTTGGGCCCSEEEEETTBCSCCCCCT---TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred CCccccccccCCCcceEecccccccCCCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHH
Confidence 32 111 5789999999999999999975 78 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCcee
Q 006890 460 KGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGY 536 (627)
Q Consensus 460 ~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~ 536 (627)
+++.+++++++| |+++.+|+.++++.+++.|+. +.|++||||| +++||.|.+.+.. + ++.+|+|||||++|||+
T Consensus 141 ~a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi 217 (262)
T 1o0x_A 141 EVLEKAIKMIKP-GIRLGDVSHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMV 217 (262)
T ss_dssp HHHHHHHHTCCT-TSBHHHHHHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEE
T ss_pred HHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEE
Confidence 999999999998 999999999999999999995 8999999999 9999999865432 1 57899999999999999
Q ss_pred ee-----------------cCccEEEEeEeeEEecCCc
Q 006890 537 YE-----------------DGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 537 y~-----------------~~~~GvriEd~v~V~~~g~ 557 (627)
|. ++.+|+|+||+|+||++|+
T Consensus 218 ~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt~~G~ 255 (262)
T 1o0x_A 218 SEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGA 255 (262)
T ss_dssp ESSCCCEEECTTSSCEEETTCCCEEECBEEEEECSSSE
T ss_pred EcCCCceeecCCCceEEeeCCCcEEEEEEEEEECCCcc
Confidence 97 3678999999999999997
|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=389.56 Aligned_cols=229 Identities=17% Similarity=0.185 Sum_probs=204.7
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|+|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+.+
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i---------------------------~pGvte~el~~~~~~~~~~~G 123 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI---------------------------KPGVTTEEIDHAVHLACIARN 123 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------hCCCcHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999998877654 789999999999998875443
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
... ..+|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+++++|+++|+.++++
T Consensus 124 ~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~---~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a 200 (329)
T 2b3h_A 124 CYPSPLNYYNFPKSCCTSVNEVICHGIPDR---RPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYEC 200 (329)
T ss_dssp CEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CccccccccCCCCeEEecCCCCcCCCCCCC---cCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 221 24799999999999999999975 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++.+|+.++++++++.|+. +.|++||||| +++||.|.+..... ...+|++|||||||||+|.
T Consensus 201 ~~~ai~~~kP-G~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~ 277 (329)
T 2b3h_A 201 LMQAIDAVKP-GVRYRELGNIIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICE 277 (329)
T ss_dssp HHHHHHTCCT-TCBTTHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEES
T ss_pred HHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCc
Confidence 9999999998 999999999999999999995 8899999999 99999998765321 2478999999999999995
Q ss_pred -----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccc-c-cccc
Q 006890 539 -----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-A-PYQI 579 (627)
Q Consensus 539 -----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~-p~~~ 579 (627)
+|.+|+|+||+|+||++|+ |.||. . |..+
T Consensus 278 ~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVTe~G~------------evLT~~~~~k~~ 325 (329)
T 2b3h_A 278 GGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGC------------EILTRRLDSARP 325 (329)
T ss_dssp SCCCEEECTTSCCEEETTCCCEEECBEEEEECSSSE------------EETTCCSSCSSC
T ss_pred CcccccccCCCceeEeeCCeEEEEEeeEEEEcCCee------------EECCCCCCCCCC
Confidence 4679999999999999997 88885 3 5443
|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=374.71 Aligned_cols=222 Identities=18% Similarity=0.197 Sum_probs=197.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++.++... |...
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~-g~~~ 54 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAAT---------------------------KPGITTKELDNIAKELFEEY-GAIS 54 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHH-TCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CCCCcHHHHHHHHHHHHHHc-CCcc
Confidence 9999999999999999999988776543 78999999999999877443 4322
Q ss_pred C-----cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCH-HHHHHHHHHHHHHH
Q 006890 390 L-----SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSA-HEKACYTAVLKGHI 463 (627)
Q Consensus 390 ~-----~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~-e~~~~y~~v~~~~~ 463 (627)
. +|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|++++ +|+++|+.+++++.
T Consensus 55 ~~~~~~~f~~~v~~g~n~~~~H~~p~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~ 131 (252)
T 1qxy_A 55 APIHDENFPGQTCISVNEEVAHGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFE 131 (252)
T ss_dssp HHHHHHCCSSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHH
T ss_pred cccccCCCCcceEEcCCccccCCCCCC---cCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 1 799999999999999999975 89999999999999999999999999999999999 99999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCC-CcCCCC-C-CCCcccCCcEEeeCceeee-
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGP-QSISFK-P-RNVPIHASMTATDEPGYYE- 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P-~~~~~~-~-~~~~l~~Gmv~siEPg~y~- 538 (627)
+++++++| |+++++|+.++++.+++.|+. +.|++||||| +++||.| .+.++. + ++.+|++|||||+|||+|.
T Consensus 132 ~~i~~~kp-G~~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g 208 (252)
T 1qxy_A 132 NAIAKVKP-GTKLSNIGKAVHNTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSN 208 (252)
T ss_dssp HHHTTCCT-TCBTHHHHHHHHHHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcC
Confidence 99999997 999999999999999999994 7899999999 9999999 765432 1 5689999999999999997
Q ss_pred ----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccc
Q 006890 539 ----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQ 578 (627)
Q Consensus 539 ----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~ 578 (627)
++.+|+|+||+|+||++| + .||..|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G-e------------~Lt~~p~~ 251 (252)
T 1qxy_A 209 ASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG-P------------ILTTKIEE 251 (252)
T ss_dssp CSSCEECSSSSCEECTTCCCEEEEEEEEECCTTC-C------------EETTCC--
T ss_pred CCceEecCCCceEEecCCCcEEEEEEEEEECCCc-e------------EccCCCCC
Confidence 567999999999999998 4 67777764
|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=388.37 Aligned_cols=235 Identities=18% Similarity=0.133 Sum_probs=207.6
Q ss_pred EecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHH
Q 006890 298 LLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKL 377 (627)
Q Consensus 298 ~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l 377 (627)
+...++....|.|||++||+.||+|+++++.++..+++.+ +||+||.|+++.+
T Consensus 51 v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~i---------------------------kpG~te~el~~~~ 103 (337)
T 4fuk_A 51 VKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAA---------------------------KPGITTDELDRIV 103 (337)
T ss_dssp CCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHH
T ss_pred cccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHH
Confidence 3445677789999999999999999999999998887764 8999999999998
Q ss_pred HHHHHhhcC----CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHH
Q 006890 378 ESFRASKEH----FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKA 453 (627)
Q Consensus 378 ~~~~~~~~g----~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~ 453 (627)
+++...... ....+|++++++|.|++++|+.|++ ++|++||+|++|+|+.|+||++|+||||++|++++++++
T Consensus 104 ~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~---~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~ 180 (337)
T 4fuk_A 104 HEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDS---RELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVR 180 (337)
T ss_dssp HHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHH
T ss_pred HHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCC---ccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHH
Confidence 876643322 2346899999999999999999986 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCCC--CCCcccCCcEE
Q 006890 454 CYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTA 530 (627)
Q Consensus 454 ~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~ 530 (627)
+|+.+++++.+++++++| |+++++++.++++.+.+.|+ .+.|++||||| +.+||.|.+..... +..+|+|||||
T Consensus 181 l~~~v~ea~~~ai~~~kp-G~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~ 257 (337)
T 4fuk_A 181 LVHAAYECLCAGIGVVKP-EALYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVF 257 (337)
T ss_dssp HHHHHHHHHHHHHTTCST-TCBTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEE
T ss_pred HHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEE
Confidence 999999999999999998 99999999999999999998 57899999999 99999988754432 45789999999
Q ss_pred eeCceeeec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccc
Q 006890 531 TDEPGYYED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPY 577 (627)
Q Consensus 531 siEPg~y~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~ 577 (627)
|||||+|.+ |.+|+||||+|+||++|+ |+||..|.
T Consensus 258 TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~------------EvLT~~p~ 309 (337)
T 4fuk_A 258 TIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGV------------EIFTDWVD 309 (337)
T ss_dssp EECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSE------------EESSCCSS
T ss_pred EECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcC------------EECCCCCC
Confidence 999999974 567999999999999998 99997654
|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=348.21 Aligned_cols=249 Identities=12% Similarity=0.143 Sum_probs=206.9
Q ss_pred ccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 303 ~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
-+..+|+|||++||+.||+|+++++.++..+...+ +||+||.||++.+++++.
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~i---------------------------kpGvte~el~~~~~~~i~ 64 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEAS---------------------------SSGVSVLSLCEKGDAMIM 64 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------C-CCBHHHHHHHHHHHHH
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHH
Confidence 46789999999999999999999999988776653 799999999999988664
Q ss_pred hhc---------CCCCCcCCcccccCCCcccccccCCCC-ccCCCCCCCeEEEeecceecCcccceEEEEecC-----CC
Q 006890 383 SKE---------HFRGLSFPTISSVGPNAAIMHYSPQSE-TCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFG-----KP 447 (627)
Q Consensus 383 ~~~---------g~~~~~f~~i~~~G~n~a~~h~~~~~~-~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G-----~p 447 (627)
... .+.+.+|+++++ .|.+++||.|.++ .+++|++||+|+||+|++|+||++|+||||++| +|
T Consensus 65 ~~ga~~~~~~~~~~~g~~f~~~vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~ 142 (401)
T 2q8k_A 65 EETGKIFKKEKEMKKGIAFPTSIS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQV 142 (401)
T ss_dssp HHHHTSSTTCTTCCEEEEEEEEEE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCB
T ss_pred HcCChhhcccccccCCCCCCcEEe--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCC
Confidence 321 234567766554 8999999999433 248999999999999999999999999999999 89
Q ss_pred CHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCC--cCCCC------
Q 006890 448 SAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQ--SISFK------ 518 (627)
Q Consensus 448 ~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~--~~~~~------ 518 (627)
+++++++|+++++++.+++++++| |+++++|+.+++++++++|+. +.+.+||||| +.+||.|. +..+.
T Consensus 143 s~~~~~l~~~~~~a~~~~i~~~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 143 TGRKADVIKAAHLCAEAALRLVKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccC
Confidence 999999999999999999999998 999999999999999999994 5688999999 99999996 22221
Q ss_pred CCCCcccCCcEEeeCceeee------------------------------------------------------------
Q 006890 519 PRNVPIHASMTATDEPGYYE------------------------------------------------------------ 538 (627)
Q Consensus 519 ~~~~~l~~Gmv~siEPg~y~------------------------------------------------------------ 538 (627)
..+.+|++||||+||||++.
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g 299 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMG 299 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHH
T ss_pred CCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHH
Confidence 03578999999999999972
Q ss_pred -------------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccc--cccCCCHHHHH-HHH
Q 006890 539 -------------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMI--NLKSLTPEEID-WLN 596 (627)
Q Consensus 539 -------------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i--~~~~l~~~e~~-~ln 596 (627)
+|.+..++|+||+||++|+ +.||..|++++.+ +++ ++++|+. +|.
T Consensus 300 ~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt~~G~------------eilT~~~~~~~~~~s~~~-~~d~e~~~~l~ 366 (401)
T 2q8k_A 300 VVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGP------------MRITSGPFEPDLYKSEME-VQDAELKALLQ 366 (401)
T ss_dssp HHHHHHTTSEEEECCEECCTTCCEEEEEEEEEEETTEE------------EECCCCCCCGGGBCCSCC-CCCHHHHHHHH
T ss_pred HHHHHHcCCccCCCceEeeCCCEEEEEEEEEEECCCCc------------EEecCCCCCHhhccCCCc-cCcHHHHHHHh
Confidence 1345589999999999997 9999999988888 333 4445543 553
|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=314.93 Aligned_cols=200 Identities=16% Similarity=0.086 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCC
Q 006890 314 VELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFP 393 (627)
Q Consensus 314 ~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~ 393 (627)
+||+.||+|+++++.++..+++++ +||+||.|+++.++.++.+ .|. .++|+
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i---------------------------~pG~te~el~~~~~~~~~~-~G~-~~~fp 51 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLA---------------------------RPGMLLLELAESIEKMIME-LGG-KPAFP 51 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHH-TTC-EESSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC---------------------------CCCCCHHHHHHHHHHHHHH-cCC-CCCCC
Confidence 489999999999999999887764 7999999999999998754 344 37899
Q ss_pred cccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCC
Q 006890 394 TISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNG 473 (627)
Q Consensus 394 ~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G 473 (627)
++++ .|..++||.|+..++++|++||+|++|+|++|+||++|+||||++|+ +++++|+++++++.+++++++| |
T Consensus 52 ~~vs--~n~~~~H~~p~~~~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G 125 (295)
T 1xgs_A 52 VNLS--INEIAAHYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-G 125 (295)
T ss_dssp CEEE--ETTEEECCCCCTTCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-T
T ss_pred cEEe--eCCccccccCCCCCCccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-C
Confidence 8876 46778999998545689999999999999999999999999999997 7899999999999999999998 9
Q ss_pred cccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC-C-CCcccCCcEEeeCceeeecCccEEEEeEee
Q 006890 474 TCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP-R-NVPIHASMTATDEPGYYEDGNFGIRLENVL 550 (627)
Q Consensus 474 ~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~-~-~~~l~~Gmv~siEPg~y~~~~~GvriEd~v 550 (627)
+++++|+.++++++++.|+. +.|++|||||. +++||+|.+....+ + +.+|+|||||+|||++| +|.++||+||..
T Consensus 126 ~~~~dI~~a~~~~~~~~G~~~~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~~~ 203 (295)
T 1xgs_A 126 VEIKELGKAIENEIRKRGFKPIVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPT 203 (295)
T ss_dssp CBTHHHHHHHHHHHHTTTCEECTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHCCCeEECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECCce
Confidence 99999999999999999995 78999999985 59999998754432 4 78999999999999999 899999999743
|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=321.60 Aligned_cols=207 Identities=17% Similarity=0.210 Sum_probs=176.1
Q ss_pred hhhhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 306 LAKAI--KNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 306 ~~r~i--K~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
.+|++ ||++||+.||+|++++..++..+...+ +||+||.||++.++..+..
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~i---------------------------kpGvTe~ELa~~le~~~~~ 206 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWI---------------------------KPGMTMIEICEKLEDCSRK 206 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTSBHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhc---------------------------CCCCcHHHHHHHHHHHHHH
Confidence 44554 999999999999999999988877653 7999999999998876532
Q ss_pred ---hcCC-CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHH
Q 006890 384 ---KEHF-RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVL 459 (627)
Q Consensus 384 ---~~g~-~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~ 459 (627)
..|. .+.+|+++++. |..++||.|+.+.+++|++||+|+||+|++|+||++|+||||++| ++++++|++++
T Consensus 207 ~i~~~Ga~~g~~FP~ivSv--N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~ 281 (478)
T 1b6a_A 207 LIKENGLNAGLAFPTGCSL--NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVK 281 (478)
T ss_dssp HHTCBTTTEEEEEEEEEEE--TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHH
T ss_pred HHHhcCCcccCCCCeEEEC--CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHH
Confidence 2343 45689988764 778899999743348999999999999999999999999999996 78999999999
Q ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC----------Ccccccccc-cccCccccCCCcCCCCC-CCCcccCC
Q 006890 460 KGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD----------YRHGTGHGV-GSYLNVHEGPQSISFKP-RNVPIHAS 527 (627)
Q Consensus 460 ~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----------~~h~~GHgv-G~~l~vhE~P~~~~~~~-~~~~l~~G 527 (627)
+++.+++++++| |+++++|+.+++++++++|+. +.|++|||| | +.+||.|.+....+ +..+|++|
T Consensus 282 eA~~aaI~~~kP-G~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~~~~~~~Le~G 358 (478)
T 1b6a_A 282 DATNTGIKCAGI-DVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVKGGEATRMEEG 358 (478)
T ss_dssp HHHHHHHHHCCT-TCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSSSCCCCBCCTT
T ss_pred HHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceecCCCCCEeCCC
Confidence 999999999997 999999999999999999973 689999999 7 89999886654433 57899999
Q ss_pred cEEeeCceeeecCccEEEEeEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENV 549 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~ 549 (627)
|||+|||++| .|. |+|+||.
T Consensus 359 MVftIEP~i~-~G~-G~~~ed~ 378 (478)
T 1b6a_A 359 EVYAIETFGS-TGK-GVVHDDM 378 (478)
T ss_dssp CEEEEEEEEE-SSC-SCCEECS
T ss_pred CEEEEeCeeE-CCC-CEEEECC
Confidence 9999999999 443 6677653
|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=271.47 Aligned_cols=201 Identities=13% Similarity=0.091 Sum_probs=164.7
Q ss_pred ccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 303 ~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
-...+|.+|+++||+.||+|++++.+++..+..++ +||+|+.||++.++++..
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~i---------------------------kpG~t~~el~~~~e~~i~ 84 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIV---------------------------RPGITLLEIVRSIEDSTR 84 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------CCCCcHHHHHHHHHHHHH
Confidence 35779999999999999999999999998876664 899999999999988664
Q ss_pred hh---cCCCCCcCCcccccCCCcccccccCCCC-ccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHH
Q 006890 383 SK---EHFRGLSFPTISSVGPNAAIMHYSPQSE-TCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAV 458 (627)
Q Consensus 383 ~~---~g~~~~~f~~i~~~G~n~a~~h~~~~~~-~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v 458 (627)
.. ..+.+.+|++.++ .|..++||.|+.. ++++|++||+|.||+|+.|+||++|+|||+.+|+..+ +++..+
T Consensus 85 ~~~~~~~~~g~~FP~ciS--vN~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~~---~l~~~~ 159 (358)
T 3fm3_A 85 TLLKGERNNGIGFPAGMS--MNSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLE---PLLVAA 159 (358)
T ss_dssp HHTTTSGGGGEEEEEEEE--ETTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGH---HHHHHH
T ss_pred HhcCCCcccCCCCCcEEe--eCCEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccch---hHHHHH
Confidence 32 2234568886554 5777889999642 3589999999999999999999999999999996554 456777
Q ss_pred HHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC----------CcccccccccccCccccCCCcCCCCC-CCCcccCC
Q 006890 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD----------YRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHAS 527 (627)
Q Consensus 459 ~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----------~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~G 527 (627)
.+++.+++++++| |++..++..++++++.+.|+. +.+.+|||||++ ..||.|.+....+ ...+|++|
T Consensus 160 ~~al~aai~~~~p-G~~~~dig~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~G 237 (358)
T 3fm3_A 160 REGTETGIKSLGV-DVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGD 237 (358)
T ss_dssp HHHHHHHHHHCCT-TCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSS
T ss_pred HHHHHHHHHhhhc-CCccccccHHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeee
Confidence 8888899999997 999999999999999988752 356789999954 4588877655443 56789999
Q ss_pred cEEeeCceee
Q 006890 528 MTATDEPGYY 537 (627)
Q Consensus 528 mv~siEPg~y 537 (627)
|||+|||.+.
T Consensus 238 mV~tIEP~is 247 (358)
T 3fm3_A 238 SFYAVETFAT 247 (358)
T ss_dssp EEEEEEEEEE
T ss_pred eeEEeeeeee
Confidence 9999999763
|
| >3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-24 Score=194.47 Aligned_cols=124 Identities=19% Similarity=0.317 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEe-CCceEEEEcchhHHHHhccccC
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT-MNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt-~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+||+|++||+ +++++||||+||++||++|++
T Consensus 11 ~~Rl~~l~~~m~~~~--~da~li~~~------------~n~~yltGf~~s~g~lvv~~~~~a~l~td~Ry~~qA~~~~~- 75 (135)
T 3qoc_A 11 LQRRRALSAQLAAKR--IDAMLVTHL------------THIRYLSGFTGSNAALIINKDLSARISTDGRYITQIAEQVP- 75 (135)
T ss_dssp HHHHHHHHHTHHHHT--CSEEEECCH------------HHHHHHHCCCSSCCEEEEETTSCEEEEECGGGHHHHHHHCT-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCh------------hhCeeeecccCCCeEEEEeeCCccEEEeCcHHHHHHHHhCC-
Confidence 579999999999987 999999988 8999999999999999999 889999999999999999987
Q ss_pred cEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 81 EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
+++++..+ ...+|+.+.+...++||||++.+|++.+++|++.++. +++++++ +++|+++|
T Consensus 76 ~~~i~~~~---~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~-~~~v~~lR 135 (135)
T 3qoc_A 76 DIESLMAR---NCAPALLSDINGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV-TGAIEKLR 135 (135)
T ss_dssp TSEEEECS---SHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE-CSCC----
T ss_pred CcEEEEeC---cHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC-ccHHHHhC
Confidence 47888754 2457888877677899999999999999999998743 3789998 89999887
|
| >3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=187.84 Aligned_cols=126 Identities=25% Similarity=0.337 Sum_probs=109.7
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccC
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||+|++|+++|+.++++||||+||++||+++++.
T Consensus 4 ~~~Rl~~lr~~m~~~~--~da~li~~~------------~ni~YltGf~~~~~~llv~~~~~~l~~d~r~~~~a~~~~~~ 69 (131)
T 3il0_A 4 MQRRLERFDAKLVQSG--LDALLVTGQ------------NNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIAKQSVHG 69 (131)
T ss_dssp GGGHHHHHHHHHHHHT--CSEEEECSH------------HHHHHHHSCCCSSEEEEEESSCEEEEECTTSHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEecc------------cccEEEeCcccCCeEEEEECCCCEEEECchhHHHHHHhCCC
Confidence 5789999999999997 999999999 89999999999999999999999999999999999998863
Q ss_pred cEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 81 EWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
++++.+ +++.+|+.+.+++. ++||||++ +|+..+++|++.+ .++++++. +++|+.+|++|
T Consensus 70 -~~v~~~---~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~--~~~~~v~~-~~~v~~lR~iK 131 (131)
T 3il0_A 70 -FDIIES---KDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIF--EGYTLSPQ-TNFMEELRMIK 131 (131)
T ss_dssp -SEEEEC---SCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHT--TTSEEEEE-SSHHHHHHC--
T ss_pred -cEEEEe---CCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhc--CCCEEEEC-chHHHHhccCC
Confidence 677765 23557787776544 78999999 9999999999987 35799998 89999999987
|
| >3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=182.41 Aligned_cols=122 Identities=25% Similarity=0.376 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccCc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGE 81 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~~ 81 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+||+|++||++++++||||+||++||++++++
T Consensus 9 ~~Rl~~l~~~m~~~~--~da~li~~~------------~n~~YltGf~~~~~~~vv~~~~~~l~td~ry~~qa~~~~~~- 73 (132)
T 3ovk_A 9 EQRLGHCLRQMAEKG--LEALLVTHL------------TNSYYLTGFSGTAATVLITAKRRVLITDSRYTLLAKASVEG- 73 (132)
T ss_dssp HHHHHHHHHHHHHHT--CCEEEECSH------------HHHHHHHCCCCSCCEEEEESSCEEEEECTTTHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCc------------ccceeeeCccCCCEEEEEECCccEEEECchhHHHHHHhCCC-
Confidence 589999999999997 999999999 89999999999999999999999999999999999999875
Q ss_pred EEEEEcCCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 82 WKLMRMLEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++++.+.+ + + +++.+.++ +.++||||++ +|+..+++|++.++ +.+++++ +++|+.+|
T Consensus 74 ~~v~~~~~-~-~-~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l~--~~~~v~~-~~~v~~lR 132 (132)
T 3ovk_A 74 FDIIESRT-P-L-KVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAELS--GITLLAQ-SGFVEHLR 132 (132)
T ss_dssp CEEEECSC-H-H-HHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHCT--TCEEEEE-SSTTGGGC
T ss_pred cEEEEeCC-C-H-HHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhCC--CCeEEEC-chHHHHhC
Confidence 67776643 2 2 55665554 3579999999 99999999999874 4799998 89999887
|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-22 Score=211.01 Aligned_cols=321 Identities=19% Similarity=0.264 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccC
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
|++||++||+.|++++ +||+||+++ .|++|||||+|+.|+++|++++++||||+||.+||+++++.
T Consensus 3 ~~~Rl~~lr~~m~~~g--iDa~lI~~~------------~ni~YLtGf~g~~~~llvt~~~~~l~~d~r~~~~a~~~~~~ 68 (356)
T 3q6d_A 3 AMEKIERLRSAFDEAG--IDGILLTNE------------HSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVG 68 (356)
T ss_dssp HHHHHHHHHTTHHHHT--CSEEEECCH------------HHHHHHHCCCSSSCEEEEESSCEEEEECGGGHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHcC--CCEEEECCh------------hhceEccCCCCCCeEEEEECCCeEEEEChhhHHHHHhhCCC
Confidence 4689999999999987 999999999 89999999999999999999999999999999999988764
Q ss_pred cEEEEEcCCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCcccc
Q 006890 81 EWKLMRMLEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTV 158 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~ 158 (627)
++++.+.++ +.+++.+.++ ..++||+|++.+|+..++.|++.++ + ++++. ++++..+|.+|++.|
T Consensus 69 -~~v~~~~~~--~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~~--~-~~~~~-~~~~~~~R~iK~~~E------ 135 (356)
T 3q6d_A 69 -YEIVQHAGL--IIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAID--A-EFIPT-SGLVEKLRLIKTDSE------ 135 (356)
T ss_dssp -SEEEECSSC--HHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHCC--S-EEEEE-CSHHHHHHTSCCHHH------
T ss_pred -CEEEEeCCC--HHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhcc--c-ceecc-hhhhhhhccCCCHHH------
Confidence 566654332 4455665554 2478999999999999999998763 3 88888 899999999999998
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~ 238 (627)
++.+|++.+.. +..+....+.+ .| .+++.++...++.
T Consensus 136 -------------i~~~r~A~~i~--~~~~~~~~~~i-------------~~---------------G~te~e~~~~~~~ 172 (356)
T 3q6d_A 136 -------------IKILKEAAQIA--DAAFEHILSFI-------------RP---------------GVSEIEVSNELEF 172 (356)
T ss_dssp -------------HHHHHHHHHHH--HHHHHHHTTTC-------------CT---------------TCBHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHH--HHHHHHHHHHc-------------cC---------------CCCHHHHHHHHHH
Confidence 77777766442 11110001000 11 2455566666666
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhh
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKA 309 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~ 309 (627)
.+...|.+..+|+.+ ++++.+.+ |+.+ ..++.|.+|.+. .+ ...... ..+....+
T Consensus 173 ~~~~~g~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~G~~------ 236 (356)
T 3q6d_A 173 FMRKQGATSSSFDII------VASGLRSALPHGVASEKVIETGDFVTLDFGA-YY---KGYCSDITRTIAVGEP------ 236 (356)
T ss_dssp HHHHTTCSEESSCCE------EEEGGGGGCTTCBCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSCC------
T ss_pred HHHHCCCCcCCCCCE------EEEcCccccCCCCCCCcccCCCCEEEEEEeE-EE---CCEEeeeEEEEEcCCC------
Confidence 666677777777765 33333332 3321 467888999762 11 111111 11111111
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..|+.
T Consensus 237 --~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~-~~g~~- 281 (356)
T 3q6d_A 237 --SD----KLKEIYNIVLEAQLRGVNG---------------------------IKAGLTGREADALTRDYIT-EKGYG- 281 (356)
T ss_dssp --CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HTTCG-
T ss_pred --CH----HHHHHHHHHHHHHHHHHHH---------------------------hcCCCcHHHHHHHHHHHHH-HcCCc-
Confidence 22 2344444444555444443 3799999999999988764 34442
Q ss_pred CcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 390 LSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 390 ~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
..|. +--+.|-+ .|-.| +..++.+|++|.++.+..|....| +..-+.-|+.+.
T Consensus 282 ~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt 339 (356)
T 3q6d_A 282 EYFGHSTGHGIGLE---IHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVT 339 (356)
T ss_dssp GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEC
T ss_pred ccCCCCCcccCCCC---cCcCCCCCCCCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEe
Confidence 2232 22233322 23222 112347899999999999876654 344566666664
|
| >3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.3e-21 Score=173.85 Aligned_cols=128 Identities=13% Similarity=0.191 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+.+ +++|+.+ +++||||+||.+||+
T Consensus 4 ~~Rl~~lr~~m~~~~--~da~li~~~------------~ni~yltGf~g~~~er~~~lli~~~g~~~l~~d~~~~~~a~- 68 (138)
T 3pn9_A 4 MSKLQQILTYLESEK--LDVAVVSDP------------VTINYLTGFYSDPHERQMFLFVLADQEPLLFVPALEVERAS- 68 (138)
T ss_dssp CCHHHHHHHHHHHHT--CSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHH-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCc------------CceeeecCCCCCCccceEEEEEeCCCCEEEEEeccchhhhh-
Confidence 469999999999997 999999999 89999999999986 8899887 899999999999999
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCC--CCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPN--DAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
++.. ++++.+.+...+.+++.+.+++ .++||||++.+|+..++.|++.++ +.++++. +++|+.+|++|
T Consensus 69 ~~~~-~~v~~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~~--~~~~v~~-~~~i~~lR~iK 138 (138)
T 3pn9_A 69 STVS-FPVVGYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVFE--TAEFDNL-TPRIQRMRLIK 138 (138)
T ss_dssp HHCS-SCEEEECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHST--TCEEEEC-HHHHHHHTTCC
T ss_pred ccCC-CcEEEEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHCC--CCeeeeh-HHHHHHHhhcC
Confidence 7653 3445444434456788888875 478999999999999999998874 4799998 89999999987
|
| >3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-21 Score=175.35 Aligned_cols=127 Identities=8% Similarity=0.167 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ ++||+.+ +++||||+||.+||++
T Consensus 3 m~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YlTGf~~~~~er~~~llv~~~g~~~l~~~~~~~~~a~~ 68 (140)
T 3i7m_A 3 MTKLEQIQQWTAQHH--ASMTYLSNP------------KTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKE 68 (140)
T ss_dssp -CHHHHHHHHHHHTT--CSEEEECCH------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEEEEEGGGHHHHHT
T ss_pred chHHHHHHHHHHHcC--CCEEEECCC------------CcceeecCCCCCCccceEEEEEeCCCCEEEEEecccHHHHHh
Confidence 459999999999998 999999999 99999999999987 8889876 6999999999999999
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCC----CCEEEEcCCCCCHHHHHHHHHHHHhcCCeEE-ecCcChhhHhhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPN----DAAIGVDPWCVSIDTAQRWERAFAKKQQKLV-QTSTNLVDKVWK 146 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~-~~~~~lid~lr~ 146 (627)
++.. .+++.+.+.....+++.+.+++ .++||||.+.+|+..+++|++.++ +.+++ ++ +++|+++|+
T Consensus 69 ~~~~-~~i~~~~d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l~--~~~~v~~~-~~~i~~lR~ 139 (140)
T 3i7m_A 69 TGWQ-FPVIGYLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFS--APSFDLDI-TSFIEHMRG 139 (140)
T ss_dssp TTCC-SCEEEECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSS--SCEEEEEC-HHHHHHC--
T ss_pred ccCc-CcEEEEcCCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHCC--CCEEecCH-HHHHHHHHc
Confidence 8753 2333333333344566655543 379999999999999999998873 47999 98 899999985
|
| >3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=168.60 Aligned_cols=124 Identities=13% Similarity=0.187 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ .++|+.+ +++||||+||.+||++
T Consensus 2 ~~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YlTGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~ 67 (132)
T 3ooo_A 2 MSKLNRIRHHLHSVQ--AELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQ 67 (132)
T ss_dssp CHHHHHHHHHHHHTT--CSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHH
T ss_pred chHHHHHHHHHHHCC--CCEEEEcCc------------chHHHHhCCCCCCCcceEEEEEeCCCCEEEEEeccchHHHHh
Confidence 479999999999997 999999999 99999999999986 8889876 5999999999999998
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++ . .+++.+.+...+.+++.+.+++. ++||||++.+|+..+++|++.+ . .++++. +++|+++|
T Consensus 68 ~~-~-~~v~~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~--~-~~~~~~-~~~v~~lR 132 (132)
T 3ooo_A 68 SV-P-FPVFGYIDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF--D-GHFENL-TPYIQNMR 132 (132)
T ss_dssp HC-S-SCEEEECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC--C-SEEEEC-CHHHHTTC
T ss_pred cC-C-CcEEEEeCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhC--C-cceech-HHHHHhcC
Confidence 87 3 34444444344568898888764 5899999999999999999987 3 689998 88998876
|
| >3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-20 Score=167.97 Aligned_cols=124 Identities=11% Similarity=0.182 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ +++|+.+ +++||||+||.+||++
T Consensus 2 ~~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YltGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~ 67 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKG--AELAIFSDP------------VTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQ 67 (132)
T ss_dssp CHHHHHHHHHHHHTT--CCEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHH
T ss_pred hHHHHHHHHHHHHCC--CCEEEEcCc------------chhhHhhCCCCCCccceEEEEEeCCCCEEEEeehhhhHHHHh
Confidence 479999999999997 999999999 89999999999986 8999987 7999999999999998
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++ . .+++.+.+.....+++.+.+++. ++||||++.+|+..+++|++.+ . .++++. +++|+++|
T Consensus 68 ~~-~-~~i~~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~--~-~~~~~~-~~~v~~lR 132 (132)
T 3o5v_A 68 AI-S-FPVFGYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF--S-GQFNNL-TPYVQGMR 132 (132)
T ss_dssp HC-C-SCEEEECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC--C-SEEEEC-HHHHHTC-
T ss_pred cC-C-CcEEEEECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhC--C-Cceecc-HHHHHHhC
Confidence 87 3 34444444444567888888764 5899999999999999999876 3 689988 78888876
|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=191.64 Aligned_cols=318 Identities=19% Similarity=0.274 Sum_probs=203.4
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccc-----ccccccccCceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRR-----EFVSGFTGSAGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~-----~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
+|+++||+.|++++ +|++||+++ .|+ +|||||+++.+++||+++++.||+|+||..||+++
T Consensus 2 ~Rl~~Lr~~m~~~~--lDa~li~~~------------~ni~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~r~~~~a~~~ 67 (359)
T 2zsg_A 2 DRSERLIQLISEEG--IDAFLIMNI------------ENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQE 67 (359)
T ss_dssp CCHHHHHHHHHTTT--CCEEEEEES------------TTTTHHHHHHHHCCCSSCEEEEEETTEEEEEECTTTHHHHHHH
T ss_pred hHHHHHHHHHHHCC--CcEEEEECh------------hHcccccCeeEeccCCCCEEEEEECCCCEEEECcccHHHHHhC
Confidence 58999999999987 999999998 567 99999999999999999999999999999999887
Q ss_pred ccCcEEEEEc-CCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCC
Q 006890 78 LTGEWKLMRM-LEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETY 154 (627)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~ 154 (627)
. .++++.+ .+. +.+++.+.+. ..++||+|++.+++..++.|++.++ +.++++. +++|+.+|.+|++.|
T Consensus 68 -~-~~~v~~~~~~~--~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lr~iK~~~E-- 138 (359)
T 2zsg_A 68 -T-DFEVREVKGGD--FIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFG--DRKFIGI-DDEVKQMRMVKDEGE-- 138 (359)
T ss_dssp -C-CSEEEEC---C--CHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHTT--TCEEEEC-HHHHHHHHHBCCHHH--
T ss_pred -C-CCEEEEecCcc--hHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhCC--CcEEEEC-hhhhhhhhcCCCHHH--
Confidence 4 4666655 221 1244554443 2468999999999999999988763 2688888 799999999999998
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCH
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSS 234 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~ 234 (627)
++.+|++.+... ..+.... .|+ + | .+++.++..
T Consensus 139 -----------------i~~~r~a~~~~~--~~~~~~~---~~~---~-------~---------------G~te~e~~~ 171 (359)
T 2zsg_A 139 -----------------IEKIKQAIEISE--RAFLETV---QQI---R-------A---------------GMTEKEIAA 171 (359)
T ss_dssp -----------------HHHHHHHHHHHH--HHHHHHH---TTC---C-------T---------------TCBHHHHHH
T ss_pred -----------------HHHHHHHHHHHH--HHHHHHH---Hhc---c-------C---------------CCCHHHHHH
Confidence 777777654311 1110000 000 0 1 134555666
Q ss_pred HHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccc
Q 006890 235 EVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLA 305 (627)
Q Consensus 235 ~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~ 305 (627)
.++..+...|..-.+|..+ ++++.+.+ |+.+ ..++.|.+|.+. .+ .....+ ..+....+
T Consensus 172 ~~~~~~~~~g~~~~~f~~i------v~~g~~~~~~h~~~~~~~l~~gd~v~iD~g~-~~---~gy~~D~tRt~~~G~~-- 239 (359)
T 2zsg_A 172 LLEYTMRKEGAEGVAFDTI------VASGCRSALPHGKASDKVVERGDVIVIDFGA-TY---ENYCADITRVVSIGEP-- 239 (359)
T ss_dssp HHHHHHHHTTCSEESSCCE------EEEGGGGGSTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC--
T ss_pred HHHHHHHHcCCCCCCCCCE------EEEccccccccCCCCCcccCCCCEEEEEEeE-EE---CCEEEeeeEEEEcCCC--
Confidence 6666666677766777766 34344333 3321 457888998762 11 111111 11111111
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..
T Consensus 240 ------~~----~~~~~~~~v~~~~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~~ 281 (359)
T 2zsg_A 240 ------SD----EVKEVHSIVLEAQERALKI---------------------------AKAGVTGKLLDSVAREFIR-EK 281 (359)
T ss_dssp ------CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HT
T ss_pred ------CH----HHHHHHHHHHHHHHHHHHH---------------------------ccCCCCHHHHHHHHHHHHH-Hc
Confidence 22 2345555555555554443 3799999999999988764 34
Q ss_pred CCCCCcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecCc-ccceEEEEec
Q 006890 386 HFRGLSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQDG-TTDITRTFHF 444 (627)
Q Consensus 386 g~~~~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~gy-~~D~tRT~~~ 444 (627)
|+. ..|. +--+.|-+ .|-.| +...+.+|++|-++.+..|....|. ..-+.-|+.+
T Consensus 282 g~~-~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~v 341 (359)
T 2zsg_A 282 GYG-EFFGHSLGHGIGLE---VHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVL 341 (359)
T ss_dssp TCG-GGBCSCSEEECSSS---SSEEEEESTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCc-ccCCCCCccccCcc---cCCCCCcCCCCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEE
Confidence 442 1222 12223322 23222 1123478999999999998766553 3445556665
|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-19 Score=194.88 Aligned_cols=343 Identities=12% Similarity=0.108 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHh--cCCCCceEEEEcCCCCc-CccCcCccccccccccccccCceEEEEeCCceEEEEcch---hHHHHh
Q 006890 2 AEILAALRSLMS--SHDPPLHALVVPSEDYH-QSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGR---YFLQAT 75 (627)
Q Consensus 2 ~~Rl~~Lr~~m~--~~~~~~Da~li~~~d~h-~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~R---Y~~qA~ 75 (627)
.+||++||+.|+ +++ +||+||+++|+| +|+|+ .++..+.|||||+++.+++||+.++++||||+| |+.||+
T Consensus 14 ~~Rl~~Lr~~m~~~~~g--iDa~li~~~~~~~~~~y~-~~~~~~~yLtGf~~~~~~lvVt~d~~~L~~d~~~~~y~~~a~ 90 (467)
T 3biq_A 14 KKRIELLYSKYNEFEGS--PNSLLFVLGSSNAENPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKAI 90 (467)
T ss_dssp HHHHHHHHHHGGGSTTC--CSEEEEEECSCCTTSTTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcC--CCEEEEEcCCCCCCCCCc-cchhhhhHhhCCCCCCEEEEEECCeEEEEECCcchHHHHHHh
Confidence 579999999999 887 999999999998 69999 899999999999999999999999999999999 788998
Q ss_pred c--ccc--C-cEEEEEc--CCC---CCHHHHHHhhCCC-CCEEEEc-CCCCCHHHHHHHHHHHHh----cCCeEEecCcC
Q 006890 76 Q--ELT--G-EWKLMRM--LED---PAVDVWMANNLPN-DAAIGVD-PWCVSIDTAQRWERAFAK----KQQKLVQTSTN 139 (627)
Q Consensus 76 ~--~~~--~-~~~~~~~--~~~---~~~~~~l~~~l~~-~~~vg~d-~~~~s~~~~~~l~~~l~~----~~~~l~~~~~~ 139 (627)
+ ++. + .++++.+ .+. +.+.++|.+.+++ +++||++ ++.+|...++.|++.+.. .+.++++. ++
T Consensus 91 ~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~-~~ 169 (467)
T 3biq_A 91 DLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDI-SL 169 (467)
T ss_dssp GGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEEC-HH
T ss_pred hhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeech-HH
Confidence 7 654 2 4777755 211 1244667766543 4689995 678899999999988753 35789988 79
Q ss_pred hhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEE
Q 006890 140 LVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVT 219 (627)
Q Consensus 140 lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~ 219 (627)
+|+.+|.+|++.| |+.+|++.+... ..+... +.|+- |. +.
T Consensus 170 ~i~~lr~iK~~~E-------------------i~~~r~A~~i~~--~a~~~~---~~~i~----------~~------i~ 209 (467)
T 3biq_A 170 GLSKVWEVKDVNE-------------------QAFLSVSSKGSD--KFMDLL---SNEMV----------RA------VD 209 (467)
T ss_dssp HHHHHTCSCCHHH-------------------HHHHHHHHHHHH--HHHHHH---HHHHH----------HH------HH
T ss_pred HHHHHHccCCHHH-------------------HHHHHHHHHHHH--HHHHHH---HHHhh----------hc------cc
Confidence 9999999999988 666666654311 111000 01110 00 00
Q ss_pred CCceEEEEeCCCCCHHHHHhhhh-----CC-------------e----EEeeCCchhHHHHHHhhccCCC---CCCC---
Q 006890 220 TNAAFLYVDKRKVSSEVISFLKE-----SG-------------V----EVRDYDAVSSDVVLLQSNQLNP---PADV--- 271 (627)
Q Consensus 220 ~~~~~L~v~~~~~~~~~~~~l~~-----~~-------------v----~v~~y~~~~~~~~~~~~~~l~~---~~~~--- 271 (627)
.+ ..+++.++...++..+.. .| + ...+|..+ ++++.+.+ |..+
T Consensus 210 ~g---~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~i------v~~G~n~~~~~H~~~~~~ 280 (467)
T 3biq_A 210 EE---LKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPI------IQSGKKFDLRVSARSTND 280 (467)
T ss_dssp TT---CCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCE------EECTTCCCCSTTCCCCSS
T ss_pred cc---CCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCe------EEecCCcceeeccCCCCC
Confidence 00 013444455555554443 22 2 24567666 44444432 3321
Q ss_pred --CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhh
Q 006890 272 --QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIW-LDKQMQEIYG 346 (627)
Q Consensus 272 --~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~-l~~~~~~~~~ 346 (627)
..++.|.+|.+. .+ ...... ..+... + ++. .|++..+.-.++...++. +
T Consensus 281 ~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~g-~--------~~~----~~~~~~~v~~a~~~~~~~~~--------- 334 (467)
T 3biq_A 281 QLYGNGCILASCGI-RY---NNYCSNITRTFLID-P--------SEE----MANNYDFLLTLQKEIVTNIL--------- 334 (467)
T ss_dssp BCCCSEEEEEEECE-EE---TTEECCEEEEEEES-C--------CHH----HHHHHHHHHHHHHHHHHHTC---------
T ss_pred ccCCCCEEEEEEeE-EE---CCEEeeeeEEEEeC-C--------CHH----HHHHHHHHHHHHHHHHHhCC---------
Confidence 457888888763 11 111111 111111 1 332 345555555555555444 3
Q ss_pred ccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc-CCCCCcCCccc--ccCCCcccccccC---CCCc-cCCCCC
Q 006890 347 ASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE-HFRGLSFPTIS--SVGPNAAIMHYSP---QSET-CAEMDP 419 (627)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~-g~~~~~f~~i~--~~G~n~a~~h~~~---~~~~-~~~l~~ 419 (627)
+||++-.+|...+.+...+.. |+ +..|..-. +.|-+ .|-.| +... +.+|++
T Consensus 335 ------------------~pG~~~~~v~~~~~~~~~~~g~g~-~~~~~h~~GHgiGl~---~hE~p~~~~~~~~~~~l~~ 392 (467)
T 3biq_A 335 ------------------KPGRTPKEVYESVIEYIEKTKPEL-VPNFTKNIGSLIGLE---FRDSNFILNVKNDYRKIQR 392 (467)
T ss_dssp ------------------CTTCCHHHHHHHHHHHHHHHCGGG-GGGBCSCCEEECSSS---SCCGGGBSSTTCCSCCCCT
T ss_pred ------------------cCCCcHHHHHHHHHHHHHHhCcch-hhcCCCCcccccccc---cccCCccCCCCCCCCccCC
Confidence 789999999999988764432 22 12232212 22321 23222 1123 479999
Q ss_pred CCeEEEeecce-e-----c-CcccceEEEEecC
Q 006890 420 NSIYLCDSGAQ-Y-----Q-DGTTDITRTFHFG 445 (627)
Q Consensus 420 gd~vliD~g~~-y-----~-gy~~D~tRT~~~G 445 (627)
|-++.+..|.. . . .+..-+.-|+.|.
T Consensus 393 Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 393 GDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp TCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 99999999876 3 3 3456677788886
|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.6e-18 Score=180.98 Aligned_cols=322 Identities=13% Similarity=0.084 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCc----eEEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA----GLALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~----g~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
.+|+++||+.|++++ +||+||+++ .|++|||||+++. ++++|+.+ +++|++|.+|..++++
T Consensus 16 ~~R~~~l~~~m~~~g--~da~li~~~------------~ni~YltG~~~~~~~r~~~l~v~~~g~~~l~~~~~~~~~~~~ 81 (378)
T 4ege_A 16 ARRLAAAAAATEQAG--LAGLVITPG------------YDLRYLIGSRADTFERLTALVLPASGVPTIVLPRLELASLKE 81 (378)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSS------------HHHHHHHCCCCCCSSSCCEEEEESSSCCEEEEEGGGGGGGGT
T ss_pred HHHHHHHHHHHHHcC--CCEEEECCc------------chhHHhhCCCCCCCcceEEEEEEeCCcEEEEEChhhHHHHHh
Confidence 579999999999987 999999999 8999999999975 68888876 5899999999999987
Q ss_pred cc-c-CcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCC
Q 006890 77 EL-T-GEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVET 153 (627)
Q Consensus 77 ~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~ 153 (627)
+. . ..+.++.+.+.....+.+.+.+... ++||+| ..+++..+..|++.+ +.++++. ++++..+|.+|++.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~---~~~~~~~-~~~i~~~R~iKs~~E- 155 (378)
T 4ege_A 82 SAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL---GVLPVLA-TDVLRQLRMVKEAAE- 155 (378)
T ss_dssp SSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH---TSCCEES-HHHHHHHHTBCCHHH-
T ss_pred cccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc---CCeEEEc-HHHHHHHHHcCCHHH-
Confidence 63 2 2355665544434456677777654 689999 679999999999887 3688888 889999999999998
Q ss_pred CccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCC
Q 006890 154 YPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVS 233 (627)
Q Consensus 154 ~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~ 233 (627)
|+.+|++.+.. +..+.... .|+ + | .+++.++.
T Consensus 156 ------------------i~~~r~A~~i~--~~a~~~~~---~~i---~-------~---------------G~tE~el~ 187 (378)
T 4ege_A 156 ------------------VDALAKAGAAI--DRVHARVP---AFL---V-------P---------------GRTEAQVA 187 (378)
T ss_dssp ------------------HHHHHHHHHHH--HHHHHHHH---HHC---C-------T---------------TCBHHHHH
T ss_pred ------------------HHHHHHHHHHH--HHHHHHHH---Hhc---c-------C---------------CCCHHHHH
Confidence 66666554331 11110000 000 0 1 13444555
Q ss_pred HHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCcc
Q 006890 234 SEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPL 304 (627)
Q Consensus 234 ~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i 304 (627)
..++..+...|.+-.+| .+ ++++.+.. |.. ...++.|.+|.+. .+ .+..... ..+....
T Consensus 188 ~~~~~~~~~~G~~~~~f-~i------v~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~-~~--~~GY~sD~tRT~~vG~-- 255 (378)
T 4ege_A 188 ADIAEAIVAEGHSAVAF-VI------VGSGPHGADPHHGYSDRKLQVGDIVVVDIGG-TY--EPGYYSDSTRTYSIGD-- 255 (378)
T ss_dssp HHHHHHHHHTTCSEEEE-EE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEEEE-EE--TTTEECCEEEEEEESC--
T ss_pred HHHHHHHHHcCCCCCCe-eE------EEeeCCCCccCCCCCCCCcCCCCEEEEEEEE-EE--CCeEEEccEEEEEeCC--
Confidence 55555555556554455 33 22222222 221 1467888888752 11 0111111 1111111
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh
Q 006890 305 ALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK 384 (627)
Q Consensus 305 ~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~ 384 (627)
.+++ +|++....-.++...++. .+||++-.++.+.+.+... .
T Consensus 256 ------~~~~----~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~ 297 (378)
T 4ege_A 256 ------PSPD----VAQQYSALQRAQRAAVDA---------------------------VRPGVTAAQVDAAARDVLA-D 297 (378)
T ss_dssp ------CCHH----HHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-H
T ss_pred ------CCHH----HHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHH-H
Confidence 1332 344554555555544443 3799999999999988764 3
Q ss_pred cCCCCCcCC--cccccCCCcccccccCC--CCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 385 EHFRGLSFP--TISSVGPNAAIMHYSPQ--SETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 385 ~g~~~~~f~--~i~~~G~n~a~~h~~~~--~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
.|+.. .|. +--+.|-. .|-.|. ..++.+|++|-++.++.|....| +..-+.-|+.+.
T Consensus 298 ~G~~~-~~~h~~GHgiGl~---~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 298 AGLAE-YFVHRTGHGIGLC---VHEEPYIVAGNELPLVAGMAFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp TTCGG-GCCSCSEEECSSS---SSEEEEECTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred cCCCC-cCCCCCcccCCCC---cCCCCccCCCCCCccCCCCEEEECCEEEeCCccEEEEeeEEEEe
Confidence 45421 222 11222322 233221 12347999999999999986654 345556666663
|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-18 Score=184.14 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC----ceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS----AGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs----~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
.+|+++||+.|++++ +||+||+++ .|++|||||+++ .++++|+.+++.||+|+||..|+.++
T Consensus 25 ~~Rl~~Lr~~m~~~~--lDa~li~~~------------~ni~yltgf~~s~~~~p~~llV~~~~~~l~~~~~~~~~a~~~ 90 (402)
T 1kp0_A 25 TRRZBRLRAWMAKSB--IDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMPWRR 90 (402)
T ss_dssp HHHHHHHHHHHHHHT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCC------------CCceEecCCCCCCCCceEEEEEeCCCCEEEeccchhhhhHHh
Confidence 579999999999987 999999998 799999999986 37899999999999999999998777
Q ss_pred ccC-cEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 78 LTG-EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 78 ~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
+.. .+.+..+ ..+.+.++|.+.++..++||+|++.+|+..++.|++.++ +.++++. +++|+.+|.+|++.|
T Consensus 91 ~~~~~v~~~~~-~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lR~iKs~~E 162 (402)
T 1kp0_A 91 SFGBNIVYTDW-KRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALP--GTEFVDV-GZPVMWZRVIKSSEE 162 (402)
T ss_dssp CSSEEEEECSS-STTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHST--TCEEEEC-HHHHHHHHTSCCHHH
T ss_pred ccCcceEeccc-cccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhCC--CCEEEEC-HHHHHHHHHcCCHHH
Confidence 654 2222211 123356788888776789999999999999999988763 4689988 799999999999998
|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=169.41 Aligned_cols=324 Identities=12% Similarity=0.154 Sum_probs=195.5
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce-----EEEEeCCceEEEEcchhHHHHh
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG-----LALITMNEALLWTDGRYFLQAT 75 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g-----~~vvt~~~a~l~tD~RY~~qA~ 75 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||.+... +++++.++..++++.|+..++.
T Consensus 15 y~~Rl~rlr~~m~~~g--lDalli~~~------------~ni~YLTG~~~~~~~~~~~~lvv~~~g~~~~~~~~~~~~~~ 80 (377)
T 4fkc_A 15 YKRRIHKFQAHFGKKG--FEGALVAPG------------SNFYYLTGFNPLGTLERLFVLILPSEGLLTAIAPRLYEKEL 80 (377)
T ss_dssp HHHHHHHHHHHHHHTT--CCEEEECSS------------HHHHHHHSCCCCCCSSSCCEEEEESSSCCEEEEEGGGHHHH
T ss_pred HHHHHHHHHHHHHHCC--CCEEEECCC------------hhheeecCCCCCCCCcceEEEEEcCCCcEEEEeccchHHHH
Confidence 3689999999999998 999999999 89999999987643 6778888777777788888777
Q ss_pred ccccCcEEEEEcCCCC--CHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCC
Q 006890 76 QELTGEWKLMRMLEDP--AVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVET 153 (627)
Q Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~ 153 (627)
++.......+...+.+ .+.+.|.+....+++||+| ..+++..+.+|++.++ +.+++++ +++|+++|.+|++.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d-~~~~~~~~~~l~~~~~--~~~~~d~-~~~i~~lR~iKs~~E- 155 (377)
T 4fkc_A 81 EEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLID-DTMPVGVFLKAKDIFD--KYSLHPI-SPVISELREIKDKDE- 155 (377)
T ss_dssp TTCSSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEEC-TTSCHHHHHHTHHHHT--TSEEEES-HHHHHHHHTSCCHHH-
T ss_pred HhcCCCEEEeccccCHHHHHHHHHHHhhhccceeeee-ccccHHHHHHHHhhCC--CCeEEEh-HHHHHHHHhcCCHHH-
Confidence 6665433333222221 1234455666667899999 5689999999999884 4799998 889999999999998
Q ss_pred CccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCC
Q 006890 154 YPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVS 233 (627)
Q Consensus 154 ~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~ 233 (627)
|+.+|++.+.. +..+....+.+ + | .+++.++.
T Consensus 156 ------------------I~~~r~A~~i~--~~a~~~~~~~~------~-------~---------------G~tE~el~ 187 (377)
T 4fkc_A 156 ------------------IKAHKKAAEIV--DKVFYRFIEGK------L-------E---------------GKSERELA 187 (377)
T ss_dssp ------------------HHHHHHHHHHH--HHHHHHHTTSC------C-------T---------------TCBHHHHH
T ss_pred ------------------HHHHHHHHHHH--HHHHHhhhhcc------C-------C---------------CccHHHHH
Confidence 77777765431 11110011000 0 1 13444455
Q ss_pred HHHHHhhhh-CCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCc
Q 006890 234 SEVISFLKE-SGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSP 303 (627)
Q Consensus 234 ~~~~~~l~~-~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~ 303 (627)
..++..+.. .|.+..+|..+ ++++.+.. |.. ...++.|.+|.+. .+ ...... ..+....+
T Consensus 188 ~~~~~~~~~~~g~~~~~f~~i------v~~G~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~G~~ 257 (377)
T 4fkc_A 188 NRIEYMIKNEFGADDVSFEPI------VASGPNGANPHHRPSHRKIRKGDVVIFDYGA-KY---LGYCSDVTRTVVVGPP 257 (377)
T ss_dssp HHHHHHHHTSTTCCEESSCCE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC
T ss_pred HHHhhhhhhccCCCCcccCcc------ccccccccccccccccccccccccccccccc-cc---cCcccccceeEEEecC
Confidence 555544433 36667777776 44444433 321 2468889999762 11 111111 11111111
Q ss_pred cchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 304 LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 304 i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
++ ..|++..+.-.++...++. .+||++-.++...+.+...
T Consensus 258 --------~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~- 297 (377)
T 4fkc_A 258 --------SE----EVKKVYEIVKEAQETAVQK---------------------------VAEGIPAEVVDATARGIIS- 297 (377)
T ss_dssp --------CT----HHHHHHHHHHHHHHHHHHH---------------------------CBTTCBHHHHHHHHHHHHH-
T ss_pred --------CH----HHHHhhhhhHHHHHHHHHh---------------------------hcCCcchhhhHHHHHHHHH-
Confidence 12 2344444444444444443 3799999999999888764
Q ss_pred hcCCCCCcCCcc--cccCCCcc-cccccCCCCccCCCCCCCeEEEeecceecCc-ccceEEEEec
Q 006890 384 KEHFRGLSFPTI--SSVGPNAA-IMHYSPQSETCAEMDPNSIYLCDSGAQYQDG-TTDITRTFHF 444 (627)
Q Consensus 384 ~~g~~~~~f~~i--~~~G~n~a-~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy-~~D~tRT~~~ 444 (627)
..|+. ..|..- -+.|-+.- .|...| .++.+|++|-++.+.-|....|. ..-+.-|+.+
T Consensus 298 ~~g~~-~~~~h~~GHgiGl~~hE~P~i~~--~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 298 KYGYG-EYFIHRTGHGLGIDVHEEPYISP--GNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp HTTCT-TTCCSCSEEECSSSSSEEEEECS--SCCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred Hhccc-ccCCCCCeEeCCCccccCCcccC--CCCCEeCCCCEEEECCeeEECCccEEEEccEEEE
Confidence 34442 122221 22332210 122222 23578999999999988655442 2233345554
|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-17 Score=170.23 Aligned_cols=316 Identities=15% Similarity=0.183 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce-E-EEEeCCceEEEEcchhHHHHhccc
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG-L-ALITMNEALLWTDGRYFLQATQEL 78 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g-~-~vvt~~~a~l~tD~RY~~qA~~~~ 78 (627)
|.+|+++||+.|++++ +|+++|+++ .|++|||||+++.+ + ++|+.++..+++|.|+ .++ ++.
T Consensus 4 m~~R~~~l~~~m~~~~--~da~li~~~------------~n~~yltg~~~~~~~~~llv~~~~~~l~~~~~~-~~~-~~~ 67 (351)
T 1wy2_A 4 MNEKVKKIIEFMDKNS--IDAVLIAKN------------PNVYYISGASPLAGGYILITGESATLYVPELEY-EMA-KEE 67 (351)
T ss_dssp CCHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEHHHH-HHH-HHH
T ss_pred HHHHHHHHHHHHHHCC--CCEEEECCC------------CCceEecCCCCCCCcEEEEEECCCcEEEECchH-HHH-hhc
Confidence 5689999999999987 999999998 79999999999766 6 8889899999999999 888 344
Q ss_pred cCcEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCcccc
Q 006890 79 TGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTV 158 (627)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~ 158 (627)
.. ++++.+.. + +.+.+.++..++||+| +.+++..++.|++.++ ..++++. ++++..+|.+|++.|
T Consensus 68 ~~-~~v~~~~~---~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~r~iK~~~E------ 132 (351)
T 1wy2_A 68 SN-IPVEKFKK---M-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKAN--IKEFKKV-DDVIRDMRIIKSEKE------ 132 (351)
T ss_dssp CS-SCEEEESS---H-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHSC--CCEEEEC-HHHHHHHHTSCCHHH------
T ss_pred CC-CeEEEeCc---H-HHHHHHHccCCEEEEc-CcCCHHHHHHHHhhCC--CCeEEEc-HHHHHHHHhCCCHHH------
Confidence 32 34443321 3 3355555545799999 8899999999987653 3488888 789999999999998
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~ 238 (627)
++.+|++.+... ..+ .++... +.+ .+++.++...++.
T Consensus 133 -------------i~~~r~A~~i~~--~a~-------~~~~~~----------------i~~-----G~te~el~~~~~~ 169 (351)
T 1wy2_A 133 -------------IKIIEKACEIAD--KAV-------MAAIEE----------------ITE-----GKKEREVAAKVEY 169 (351)
T ss_dssp -------------HHHHHHHHHHHH--HHH-------HHHHHH----------------CCT-----TCBHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHH--HHH-------HHHHHh----------------ccC-----CCcHHHHHHHHHH
Confidence 777777654311 111 111100 000 1345555666666
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhh
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKA 309 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~ 309 (627)
.+...|..-.+|+.+ ++++.+.. |..+ ..++.|.+|.+. .+ .....+ ..+....+
T Consensus 170 ~~~~~g~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~-~~---~gy~sD~tRT~~vG~~------ 233 (351)
T 1wy2_A 170 LMKMNGAEKPAFDTI------IASGYRSALPHGVASDKRIERGDLVVIDLGA-LY---QHYNSDITRTIVVGSP------ 233 (351)
T ss_dssp HHHHTTCSEESSCCE------EEEGGGGGSTTCBCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSCC------
T ss_pred HHHHcCCCCCCCCCE------EEEccccccccCCCCCcccCCCCEEEEEEEE-EE---CCEEecceEEEEcCCC------
Confidence 666677766677766 34343332 3221 467888999762 11 111111 11111111
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..|+.
T Consensus 234 --~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~~g~~- 278 (351)
T 1wy2_A 234 --NE----KQKEIYEIVLEAQKKAVES---------------------------AKPGITAKELDSIARNIIA-EYGYG- 278 (351)
T ss_dssp --CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HTTCG-
T ss_pred --CH----HHHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHH-HcCCc-
Confidence 22 2344554445555544443 3799999999999988764 34432
Q ss_pred CcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecC-cccceEEEEec
Q 006890 390 LSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHF 444 (627)
Q Consensus 390 ~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~ 444 (627)
..|. +--+.|-+ .|-.| +...+.+|++|.++.+..|....| +..-+.-|+.+
T Consensus 279 ~~~~h~~GHgiGl~---~hE~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~V 335 (351)
T 1wy2_A 279 EYFNHSLGHGVGLE---VHEWPRVSQYDETVLREGMVITIEPGIYIPKIGGVRIEDTILI 335 (351)
T ss_dssp GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred ccCCCCcccccCCC---cCCCCccCCCCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEE
Confidence 2232 22223321 23222 112347899999999999876644 33334444444
|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-15 Score=159.42 Aligned_cols=315 Identities=10% Similarity=0.095 Sum_probs=188.6
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC-----ceEEEEeCCc-eEEEEcchhHHHHhc
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS-----AGLALITMNE-ALLWTDGRYFLQATQ 76 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs-----~g~~vvt~~~-a~l~tD~RY~~qA~~ 76 (627)
+|+++||+.|++++ +|++||+++ .|++|||||.+. .++++|+.++ +.||+|.+|..+++.
T Consensus 1 ~R~~~l~~~m~~~~--~d~~li~~~------------~n~~yltG~~~~~~~~~~~~l~i~~~~~~~l~~~~~~~~~~~~ 66 (356)
T 1wn1_A 1 MRLEKFIHLLGERG--FDGALISPG------------TNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNN 66 (356)
T ss_dssp CHHHHHHHHHHHTT--CSEEEECSS------------HHHHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGTTTTTT
T ss_pred CHHHHHHHHHHHCC--CcEEEECCC------------ccceeecCCcCCCCCCceEEEEEeCCCcEEEEECcccHHHhhC
Confidence 48999999999987 999999999 899999999753 4688899876 999999999887654
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCC----CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLP----NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
. +++.+.+.....+.+.+.++ ..++||+| ..++...++.|++. .+.++++. ++++..+|.+|++.|
T Consensus 67 ---~--~v~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~---~~~~~~~~-~~~i~~~R~iK~~~E 136 (356)
T 1wn1_A 67 ---F--PATFWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL---GKFTFQPL-SSLIKELRMIKDKEE 136 (356)
T ss_dssp ---S--CEEEECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG---SCEEEEET-HHHHHHHHTSCCHHH
T ss_pred ---C--eEEEEcCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC---CCCeEEEc-HHHHHHHHhCCCHHH
Confidence 2 23333222222333444332 34689999 78999998888764 24688888 789999999999998
Q ss_pred CCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCC
Q 006890 153 TYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKV 232 (627)
Q Consensus 153 ~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~ 232 (627)
++.+|++.+.. +..+.... .|+ .| .+++.++
T Consensus 137 -------------------i~~~r~A~~i~--~~a~~~~~---~~i----------~~---------------G~te~el 167 (356)
T 1wn1_A 137 -------------------VKMMEHASRIA--DKVFEEIL---TWD----------LI---------------GMKEREL 167 (356)
T ss_dssp -------------------HHHHHHHHHHH--HHHHHHHT---TSC----------CT---------------TCBHHHH
T ss_pred -------------------HHHHHHHHHHH--HHHHHHHH---HHc----------cC---------------CCcHHHH
Confidence 77777665431 11110111 110 01 1344455
Q ss_pred CHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCc
Q 006890 233 SSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSP 303 (627)
Q Consensus 233 ~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~ 303 (627)
...++..+... ..-.+|..+ ++++.+.. |+. ...++.|.+|.+. .+ ...... ..+....+
T Consensus 168 ~~~~~~~~~~~-~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~vG~~ 236 (356)
T 1wn1_A 168 ALKIELLIREL-SDGIAFEPI------VASGENAANPHHEPGERKIRKGDIIILDYGA-RW---KGYCSDITRTIGLGEL 236 (356)
T ss_dssp HHHHHHHHHHH-SSEESSCCE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC
T ss_pred HHHHHHHHHHh-CcCCCCCcE------EEEecccccccCCCCCCeecCCCEEEEEEEE-EE---CCEEeccEEEEEcCCC
Confidence 55555544444 444556655 33333322 322 1457888999763 11 111111 11111111
Q ss_pred cchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 304 LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 304 i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
++ ..|++....-.++...++. .+||++-.++...+.+...
T Consensus 237 --------~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~- 276 (356)
T 1wn1_A 237 --------DE----RLVKIYEVVKDAQESAFKA---------------------------VREGIKAKDVDSRAREVIS- 276 (356)
T ss_dssp --------CH----HHHHHHHHHHHHHHHHHHH---------------------------CBTTSBHHHHHHHHHHHHH-
T ss_pred --------CH----HHHHHHHHHHHHHHHHHHH---------------------------hcCCCcHHHHHHHHHHHHH-
Confidence 22 2344555555555554443 3799999999999988764
Q ss_pred hcCCCCCcCC--cccccCCCcccccccCC--CCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 384 KEHFRGLSFP--TISSVGPNAAIMHYSPQ--SETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 384 ~~g~~~~~f~--~i~~~G~n~a~~h~~~~--~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
..|+. ..|. +--+.|-+ .|-.|. ..++.+|++|-++.+..|....| +..-+.-|+.+.
T Consensus 277 ~~g~~-~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 277 KAGYG-EYFIHRTGHGLGLD---VHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp TTTCG-GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred HcCCc-ccCCCCCcccCCCc---cCCCcccCCCCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEe
Confidence 34542 2232 21223321 232221 12347999999999998886544 334455566653
|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
Probab=99.51 E-value=4.4e-14 Score=153.77 Aligned_cols=147 Identities=12% Similarity=0.171 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhc--------CCCCceEEEEcCCCCcC-ccCcCccccccccccccccCceEEEEeCCceEEEEcch---
Q 006890 2 AEILAALRSLMSS--------HDPPLHALVVPSEDYHQ-SEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGR--- 69 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~--------~~~~~Da~li~~~d~h~-sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~R--- 69 (627)
.+|+++||+.|++ ++ +|++||+++|++. +.|-.+.+ +++|||||+++.+++|+++++++||+|.|
T Consensus 14 ~~Rl~~L~~~m~~~~~~~~~~~g--~Dalli~~~~~d~~~~y~q~~~-~~~yLtG~~~~~~~lvi~~~~~~l~~~~~~~~ 90 (444)
T 3cb6_A 14 HKRLGILLTSWKNEEDGKTLFQD--CDSILVTVGAHDDTNPYQKSTA-LHTWLLGYEFPSTLILLEKHRITILTSVNKAN 90 (444)
T ss_dssp HHHHHHHHHHHHSHHHHHHTSTT--CSEEEEEECSCCTTCCCCHHHH-HHHHHHSSCCSSEEEEEETTEEEEEEEHHHHT
T ss_pred HHHHHHHHHHhhhcCcccccccC--CCEEEEEeCCCCCCCCcccchh-hhHHHhCCCCCCEEEEEeCCcEEEEEcCchHH
Confidence 5799999999998 76 9999999997621 12222110 27899999999999999999999999998
Q ss_pred hHHHHh-ccccC-cEEEEEc-CCC--C-CHHHHHHhhCC-CCCEEEEcC-CCCCHHHHHHHHHHHHh--cCCeEEecCcC
Q 006890 70 YFLQAT-QELTG-EWKLMRM-LED--P-AVDVWMANNLP-NDAAIGVDP-WCVSIDTAQRWERAFAK--KQQKLVQTSTN 139 (627)
Q Consensus 70 Y~~qA~-~~~~~-~~~~~~~-~~~--~-~~~~~l~~~l~-~~~~vg~d~-~~~s~~~~~~l~~~l~~--~~~~l~~~~~~ 139 (627)
|.+|++ .+... .++++.+ .+. + ...+++.+.+. ..++||+++ +.++...+..+.+.+.. .+.+++++ ++
T Consensus 91 y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~ 169 (444)
T 3cb6_A 91 MLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDA-SL 169 (444)
T ss_dssp TTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEEC-HH
T ss_pred HHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeec-HH
Confidence 778887 65543 3566644 221 1 11234444443 246899987 67787888888777732 23688888 78
Q ss_pred hhhHhhhcCCCCC
Q 006890 140 LVDKVWKNRPPVE 152 (627)
Q Consensus 140 lid~lr~~k~~~e 152 (627)
++..+|.+|++.|
T Consensus 170 ~i~~~r~iK~~~E 182 (444)
T 3cb6_A 170 GLAKCLAIKDEQE 182 (444)
T ss_dssp HHHHHHHSCCHHH
T ss_pred HHHHHHccCCHHH
Confidence 9999999999998
|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-14 Score=157.45 Aligned_cols=130 Identities=8% Similarity=0.041 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccccccccccc--------CceEEEEeCCceEEEEcchhHHH
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTG--------SAGLALITMNEALLWTDGRYFLQ 73 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtg--------s~g~~vvt~~~a~l~tD~RY~~q 73 (627)
.+||++||+.|+++| +||+||+++ .|++|||||+| +.+++||+.+++.+|+|+||...
T Consensus 80 ~~Rl~rlr~~m~~~g--lDalli~~~------------~ni~YlTGf~g~~~~~~~~~~~~llV~~dg~~~l~d~r~~~~ 145 (470)
T 4b28_A 80 RFRHRRLTDHVVARG--YAGLLMFDP------------LNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNSPF 145 (470)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHCCCSSHHHHHHSCCCEEEEETTSCEEEECCTTCGG
T ss_pred HHHHHHHHHHHHHcC--CCEEEEcCC------------CcceeecCCCCCcccccCCCCEEEEEECCCCEEEEecchhhh
Confidence 479999999999998 999999999 89999999998 46789999999999999999543
Q ss_pred HhccccCcEEEEEcCC------C-C------CH----HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEec
Q 006890 74 ATQELTGEWKLMRMLE------D-P------AV----DVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQT 136 (627)
Q Consensus 74 A~~~~~~~~~~~~~~~------~-~------~~----~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~ 136 (627)
.....+.--++..... . + .+ .+.|.+.-...++||||.. ++..++.|++ .++++++.
T Consensus 146 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~----~~~~~vd~ 219 (470)
T 4b28_A 146 LSEFNPLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA----QGFEIMDG 219 (470)
T ss_dssp GGTTCTTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH----TTCEEEEH
T ss_pred hhhhhhHHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc----CCCEEEEc
Confidence 2211110001111000 0 0 01 1233333233579999974 6677777765 35799998
Q ss_pred CcChhhHhhhcCCCCC
Q 006890 137 STNLVDKVWKNRPPVE 152 (627)
Q Consensus 137 ~~~lid~lr~~k~~~e 152 (627)
++++..+|.+|++.|
T Consensus 220 -~~~v~~lR~iKs~~E 234 (470)
T 4b28_A 220 -EEVTEKARSVKGPDE 234 (470)
T ss_dssp -HHHHHHHHTSCCHHH
T ss_pred -HHHHHHHHhCCCHHH
Confidence 899999999999998
|
| >4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.1e-13 Score=143.83 Aligned_cols=184 Identities=13% Similarity=0.143 Sum_probs=133.2
Q ss_pred CccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHH
Q 006890 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (627)
Q Consensus 302 ~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~ 381 (627)
+.+..=+-+-|++-+..+|.|++|+..++..+..++.++... ...++|++-.|++...+.+.
T Consensus 32 ~~~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~------------------~~~kpga~I~ELCe~GD~~I 93 (614)
T 4b6a_t 32 QILLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHS------------------KTTQRQLTVPELCLLTDSFI 93 (614)
T ss_dssp ----CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH------------------HHTTCCCBTTHHHHHHHHHH
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc------------------cccCCCCcHHHHHHHHHHHH
Confidence 334445668899999999999999999999988876433210 00367888888888766654
Q ss_pred Hhh--------cCCCCCcCCcccccCCCcccccccCCCCc-------------------cCCCCCCCeEEEeecceecCc
Q 006890 382 ASK--------EHFRGLSFPTISSVGPNAAIMHYSPQSET-------------------CAEMDPNSIYLCDSGAQYQDG 434 (627)
Q Consensus 382 ~~~--------~g~~~~~f~~i~~~G~n~a~~h~~~~~~~-------------------~~~l~~gd~vliD~g~~y~gy 434 (627)
... ....|++|||-++ .|...+||+|..+. +..|+.||+|.||+|++.+||
T Consensus 94 ~e~~akvyk~K~~~KGIAFPT~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGy 171 (614)
T 4b6a_t 94 LTRLEQYYKNKVNERGIAIPTTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGY 171 (614)
T ss_dssp HHHHHTSSTTCSCCEEEEEEEEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTE
T ss_pred HHHHHhhhcCCcccCCCccCceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCe
Confidence 321 1234689988776 67788999996532 347999999999999999999
Q ss_pred ccceEEEEecCCCC-------------HHHHHHHHHHHHHHHHHHhcc----------------CCCCcccchHHHHHHH
Q 006890 435 TTDITRTFHFGKPS-------------AHEKACYTAVLKGHIALGNAV----------------FPNGTCGHTLDILARL 485 (627)
Q Consensus 435 ~~D~tRT~~~G~p~-------------~e~~~~y~~v~~~~~~~~~~~----------------~p~G~~~~~l~~~a~~ 485 (627)
.+|+++|++||... ....++..++..|.+++++.+ +| |++..+|-.+...
T Consensus 172 iadvA~Tvvvg~~~~~~~~~~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~-gvt~~~It~~Iek 250 (614)
T 4b6a_t 172 TSEVSHTMVIYPVDETKPILQPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSS-GITGQLIRTIVDT 250 (614)
T ss_dssp EEEEEEEEECCCCTTTSTTTTTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------ST-TCBHHHHHHHHHH
T ss_pred EEEEEEEEEECCcccccccccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCC-CcchHHHHHHHHH
Confidence 99999999998422 223334444444444444433 76 9999999999999
Q ss_pred HHHHcCCC-CcccccccccccC
Q 006890 486 PLWKYGLD-YRHGTGHGVGSYL 506 (627)
Q Consensus 486 ~l~~~G~~-~~h~~GHgvG~~l 506 (627)
....+|+. ...-+||+|+.|+
T Consensus 251 vaksY~ck~Vegl~sH~i~r~~ 272 (614)
T 4b6a_t 251 IARSYNCGVVPGSRVRRIRRFL 272 (614)
T ss_dssp HHHTTTCEECTTCEEEEEBTTB
T ss_pred HHhcCCcEEeccccccccccee
Confidence 99999984 5566899999774
|
| >3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=124.48 Aligned_cols=124 Identities=20% Similarity=0.288 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 168 VVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 168 ~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
+.+|++++|+.|+++|+|++++++++|++|||||+|++ ++++|+.+++.|+++.++..++.++ . .++++
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d~r~~~~a~~~-~--~~~~v 72 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDSRYTLIAKQS-V--HGFDI 72 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEECTTSHHHHHHH-C--CSSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEECchhHHHHHHh-C--CCcEE
Confidence 45799999999999999999999999999999999875 6899999999999999887654332 2 47888
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
..|++..+.+..+... .+.++||+|.. +|+..+..|. +.++++.++++..+|+||
T Consensus 73 ~~~~~~~~~l~~~l~~--------~~~~~ig~e~~-~~~~~~~~L~~~~~~~~~v~~~~~v~~lR~iK 131 (131)
T 3il0_A 73 IESKDPLKDIVKFVEV--------DKLETIGFDNQ-VSFAYYQALQAIFEGYTLSPQTNFMEELRMIK 131 (131)
T ss_dssp EECSCHHHHHHHHHHH--------TTCCEEEEETT-SCHHHHHHHHHHTTTSEEEEESSHHHHHHC--
T ss_pred EEeCCHHHHHHHHHHh--------cCCCEEEEcCC-CCHHHHHHHHhhcCCCEEEECchHHHHhccCC
Confidence 8886665555444321 12368999999 9998887664 458899999999999998
|
| >3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.7e-14 Score=128.80 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
++|++++|+.|+++|+|++++++++|++||||++|++.. +.++++|+.+ +++||++.++..++. + ..++++
T Consensus 4 ~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e----r~~~lli~~~g~~~l~~d~~~~~~a~-~---~~~~~v 75 (138)
T 3pn9_A 4 MSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE----RQMFLFVLADQEPLLFVPALEVERAS-S---TVSFPV 75 (138)
T ss_dssp CCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT----SCCEEEEESSSCCEEEEEGGGHHHHH-H---HCSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc----ceEEEEEeCCCCEEEEEeccchhhhh-c---cCCCcE
Confidence 358999999999999999999999999999999998743 3468888866 899999998876543 2 356788
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
..|.+..++...++ ..+.. .+.++||+|+..+|+..++.|. +.++++.++++..+|+||
T Consensus 76 ~~~~~~~~~~~~l~-~~l~~----~~~~~vg~e~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~lR~iK 138 (138)
T 3pn9_A 76 VGYVDSENPWQKIK-HALPQ----LDFKRVAVEFDNLILTKYHGLKTVFETAEFDNLTPRIQRMRLIK 138 (138)
T ss_dssp EEECTTSCHHHHHH-HHSCC----CCCCEEEECTTTCCHHHHHHHHHHSTTCEEEECHHHHHHHTTCC
T ss_pred EEEcCCCCHHHHHH-HHHHh----ccCCeEEEecCcCCHHHHHHHHHHCCCCeeeehHHHHHHHhhcC
Confidence 88865433333333 22322 1357899999889998887764 458999999999999998
|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-14 Score=152.58 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC----ceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS----AGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs----~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
.+|+++||+.|++++ +|++||+++ .|++|||||..+ ...++|+.++..+++|++|..++.++
T Consensus 24 ~~R~~~l~~~m~~~~--~da~li~~~------------~ni~yltg~~~~~~~~~~~llv~~~~~~l~~~~~~~~~~~~~ 89 (401)
T 1chm_A 24 ANRQARLRAHLAAEN--IDAAIFTSY------------HNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPWRR 89 (401)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHCC--CCEEEEeCc------------ccceeeCCCCcCCCCCeEEEEEecCCCEEEecccchhhHHHh
Confidence 579999999999987 999999998 799999999753 23677888899999999998886444
Q ss_pred ccCcEEEEEcCC--CCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 78 LTGEWKLMRMLE--DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 78 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
......+. +.+ ...+.+.|.+.+...++||+|++.+++..++.|++.++ +.++++. ++++..+|.+|++.|
T Consensus 90 ~~~~~~v~-~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~R~iKs~~E 162 (401)
T 1chm_A 90 TVGTDNIV-YTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYP--DAELVDV-AAACMRMRMIKSAEE 162 (401)
T ss_dssp CCSSEEEE-ECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCT--TCEEEEC-HHHHHHHHTSCCHHH
T ss_pred hcccceee-eccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhCC--CCEEEEh-HHHHHHHHhcCCHHH
Confidence 33211222 211 12345667777766679999999999999999988763 3688888 889999999999998
|
| >3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=99.24 E-value=7.2e-12 Score=113.31 Aligned_cols=125 Identities=15% Similarity=0.256 Sum_probs=95.2
Q ss_pred ccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEE-CCceEEEEeCCCCCHHHHHhhh
Q 006890 163 FAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVT-TNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 163 ~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~-~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
++-.+..+|++++|+.|+++++|+++++++.|++|||||.|+. ++++|+ .++++|++|.++..++.++ .
T Consensus 5 ~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td~Ry~~qA~~~-~- 74 (135)
T 3qoc_A 5 LADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTDGRYITQIAEQ-V- 74 (135)
T ss_dssp CCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEECGGGHHHHHHH-C-
T ss_pred cChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeCcHHHHHHHHh-C-
Confidence 5567789999999999999999999999999999999999865 688999 8899999999987665433 2
Q ss_pred hCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----C-CeEEecCCccchhh
Q 006890 242 ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----S-DKVLLQQSPLALAK 308 (627)
Q Consensus 242 ~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~-~~~~~~~~~i~~~r 308 (627)
.++++..+....+. ++. .. ..+++||+|...+++..++.|. . .++++.+++|..+|
T Consensus 75 -~~~~i~~~~~~~~~---l~~-~~------~~~~~vG~e~~~ls~~~~~~L~~~l~~~~~lv~~~~~v~~lR 135 (135)
T 3qoc_A 75 -PDIESLMARNCAPA---LLS-DI------NGPKRVGFEADYLSVSQCEELRKSAGSDVELIPVTGAIEKLR 135 (135)
T ss_dssp -TTSEEEECSSHHHH---HHH-TC------CSSEEEEEETTTSBHHHHHHHHHHSCTTEEEEEECSCC----
T ss_pred -CCcEEEEeCcHHHH---HHh-cC------cCCCeEEECCCcccHHHHHHHHHhccCCcEEEECccHHHHhC
Confidence 36777777654332 332 11 2467999999999998877653 3 47888888888876
|
| >3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.6e-11 Score=109.10 Aligned_cols=121 Identities=17% Similarity=0.244 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 168 VVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 168 ~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
+.+|++++|+.|+++++|+++++++.|++||||++|++ ++++++.++++|++|.++..++.++ . .+.++
T Consensus 8 ~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td~ry~~qa~~~-~--~~~~v 76 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITDSRYTLLAKAS-V--EGFDI 76 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEECTTTHHHHHHH-C--TTCEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEECchhHHHHHHh-C--CCcEE
Confidence 46899999999999999999999999999999999865 6788899999999999887655333 2 45778
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhh
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAK 308 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r 308 (627)
..|.+..+.+..+... .++++||+|.. +|+..+..| +..++++.++++..+|
T Consensus 77 ~~~~~~~~~l~~~l~~--------~~~~~ig~e~~-~~~~~~~~L~~~l~~~~~v~~~~~v~~lR 132 (132)
T 3ovk_A 77 IESRTPLKVVAELLEA--------DQIDCLGFEDQ-VSFSFYQAMQAELSGITLLAQSGFVEHLR 132 (132)
T ss_dssp EECSCHHHHHHHHHHH--------HTCCEEEEETT-SBHHHHHHHHHHCTTCEEEEESSTTGGGC
T ss_pred EEeCCCHHHHHHHHHH--------cCCCEEEEcCC-CCHHHHHHHHhhCCCCeEEECchHHHHhC
Confidence 8886543333333221 13578999999 999887765 4458899988888887
|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=131.70 Aligned_cols=336 Identities=13% Similarity=0.115 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCc---cCcCccccccccccccccCceEEEEeC-----CceEEEEcchhHHH
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQS---EYVSARDKRREFVSGFTGSAGLALITM-----NEALLWTDGRYFLQ 73 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~s---ey~~~~~~~~~ylTGFtgs~g~~vvt~-----~~a~l~tD~RY~~q 73 (627)
.+|+++||+.|++++ +++|++++|...+ +|.=-.+.|++|||||....++++|+. ++++||++.++..+
T Consensus 9 ~~R~~~l~~~m~~~~---~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~~~~~Lf~~~~~~~~ 85 (440)
T 2v3z_A 9 QRRRQALVEQMQPGS---AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTA 85 (440)
T ss_dssp HHHHHHHHHHSCSSE---EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHHH
T ss_pred HHHHHHHHHhcccCC---EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCCceEEEEecCCCccc
Confidence 579999999999863 7888887643222 333233478999999999888888875 36899998865443
Q ss_pred -----------HhccccCcE-EEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCC------CHHHHHHHHHHHHh---cCCe
Q 006890 74 -----------ATQELTGEW-KLMRMLEDPAVDVWMANNLPNDAAIGVDPWCV------SIDTAQRWERAFAK---KQQK 132 (627)
Q Consensus 74 -----------A~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~------s~~~~~~l~~~l~~---~~~~ 132 (627)
+..+... + .+.... .+.+.|.+.+...++|+++.... +...+..+.+.+.. .+.+
T Consensus 86 ~~w~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 161 (440)
T 2v3z_A 86 EIWFGRRLGQDAAPEKLG-VDRALAFS---EINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPAT 161 (440)
T ss_dssp HHHHCCCCHHHHHHHHHT-CSEEEEGG---GHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCCCCSE
T ss_pred ceecCCCCCHHHHHHhcC-CCEEeeHH---HHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhhcccccCCcce
Confidence 2122211 1 222221 24556666555557899987542 22233334332211 2357
Q ss_pred EEecCcChhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcce
Q 006890 133 LVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVV 212 (627)
Q Consensus 133 l~~~~~~lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~ 212 (627)
+++. .+++..+|.+|++.| |+.+|++.+... ..+.... .|+ + |
T Consensus 162 ~~~~-~~~i~~~R~iKs~~E-------------------i~~~r~A~~i~~--~a~~~~~---~~i---~-------~-- 204 (440)
T 2v3z_A 162 MIDW-RPVVHEMRLFKSPEE-------------------IAVLRRAGEITA--MAHTRAM---EKC---R-------P-- 204 (440)
T ss_dssp EECC-HHHHHHHHHSCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HHC---C-------T--
T ss_pred eeeH-HHHHHHHHhcCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---Hhc---c-------C--
Confidence 8887 789999999999998 777776654311 1110000 111 0 1
Q ss_pred eEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCc
Q 006890 213 HAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCS 285 (627)
Q Consensus 213 ~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~ 285 (627)
.+++.++...+...+...|....+|..+ ++++.+.. |.. ...++.|.+|.+. .
T Consensus 205 -------------G~tE~el~~~~~~~~~~~G~~~~~f~~i------v~~G~n~~~~H~~~~~~~l~~gd~vliD~G~-~ 264 (440)
T 2v3z_A 205 -------------GMFEYHLEGEIHHEFNRHGARYPSYNTI------VGSGENGCILHYTENECEMRDGDLVLIDAGC-E 264 (440)
T ss_dssp -------------TCBHHHHHHHHHHHHHHTTCCEESSCCE------EEEGGGGGSTTCCCCCSBCCTTCEEEEEECE-E
T ss_pred -------------CCcHHHHHHHHHHHHHHcCCCcCCCCCe------EEEcCccccccCCCCCccccCCCEEEEEeeE-E
Confidence 1344455555555566677776778776 44343333 321 1467889999862 1
Q ss_pred HHHHhhcCCC--eEEec-CCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Q 006890 286 YALYSKLNSD--KVLLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKH 362 (627)
Q Consensus 286 ~~~~~~l~~~--~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (627)
+ ...... ..+.. ..+ ++. .|++..+.-.++...++.
T Consensus 265 ~---~gy~sD~tRT~~v~G~~--------~~~----~~~~y~~v~~a~~~~i~~-------------------------- 303 (440)
T 2v3z_A 265 Y---KGYAGDITRTFPVNGKF--------TQA----QREIYDIVLESLETSLRL-------------------------- 303 (440)
T ss_dssp E---TTEECCEEEEEETTSCC--------CHH----HHHHHHHHHHHHHHHHHH--------------------------
T ss_pred E---CCEEEeeEEEEEeCCCC--------CHH----HHHHHHHHHHHHHHHHHH--------------------------
Confidence 1 111111 11111 111 222 344554545555544443
Q ss_pred CCCCCcCHHHHHHHHHHHHHh---hcCCC-------------CCcCCccc--ccCCCc-ccccccCCCCccCCCCCCCeE
Q 006890 363 SGTVKLTEVTVSDKLESFRAS---KEHFR-------------GLSFPTIS--SVGPNA-AIMHYSPQSETCAEMDPNSIY 423 (627)
Q Consensus 363 ~~~~g~tE~ei~~~l~~~~~~---~~g~~-------------~~~f~~i~--~~G~n~-a~~h~~~~~~~~~~l~~gd~v 423 (627)
.+||++-.++...+.+...+ ..|.. ..-|..-+ +.|-.- ..|++.+. .+.+|++|-++
T Consensus 304 -~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~~~--~~~~L~~Gmv~ 380 (440)
T 2v3z_A 304 -YRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQD--RSRILEPGMVL 380 (440)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCCGG--GCCCCCTTCEE
T ss_pred -hcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcCCC--CCCccCCCCEE
Confidence 37899998888887665432 11210 11121111 122110 12333222 34799999999
Q ss_pred EEeecceecC----------cccceEEEEecC
Q 006890 424 LCDSGAQYQD----------GTTDITRTFHFG 445 (627)
Q Consensus 424 liD~g~~y~g----------y~~D~tRT~~~G 445 (627)
.+.-|....+ +..-+.-|+.+.
T Consensus 381 tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 381 TVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp EECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred EECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 9998876653 344555566663
|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.1e-11 Score=128.88 Aligned_cols=333 Identities=11% Similarity=0.070 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCc----CccCcCccccccccccccccCceEEEEeCC----ceEEEE-------
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYH----QSEYVSARDKRREFVSGFTGSAGLALITMN----EALLWT------- 66 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h----~sey~~~~~~~~~ylTGFtgs~g~~vvt~~----~a~l~t------- 66 (627)
.+|.++|.+.|.++ ..+|+++.++. -.+|.=-++.|.+|||||+++.++++++.+ +..||+
T Consensus 7 ~~RR~~l~~~l~~~----~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~lfv~~~~~~~ 82 (427)
T 3ig4_A 7 AQNRERLVNTLPDE----SITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPVM 82 (427)
T ss_dssp HHHHHHHHTTSCSS----EEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTTG
T ss_pred HHHHHHHHHhCcCC----CEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceEEEEecCCCccc
Confidence 46777787777653 34555555431 234655667899999999999988888652 345555
Q ss_pred ----cchhHHHHhccccCcE-EEEEcCCCCCHHHHHHhhCCC--CCEEEEcCC--------CCCHHHHHHHHHHHHhcCC
Q 006890 67 ----DGRYFLQATQELTGEW-KLMRMLEDPAVDVWMANNLPN--DAAIGVDPW--------CVSIDTAQRWERAFAKKQQ 131 (627)
Q Consensus 67 ----D~RY~~qA~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~--~~~vg~d~~--------~~s~~~~~~l~~~l~~~~~ 131 (627)
+.||..|+.++..+ + .+... + .+.+.|.+.+.. .++|+++.. .+++..++.|++.++ +.
T Consensus 83 ~~w~g~r~~~~~a~~~~~-~~~v~~~-~--~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 156 (427)
T 3ig4_A 83 EKWVGKTVSNEEAEKISG-IKKVIYL-D--SFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYP--HV 156 (427)
T ss_dssp GGTTCCCCCHHHHHHHHC-CSEEEEG-G--GHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCT--TC
T ss_pred eEEeCCCCcHHHHHhcCC-CCEEEEh-h--hHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCC--CC
Confidence 47999888777654 2 23322 2 244556666554 578999853 345678888888764 47
Q ss_pred eEEecCcChhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcc
Q 006890 132 KLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPV 211 (627)
Q Consensus 132 ~l~~~~~~lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~ 211 (627)
+++++ +.++..+|.+|++.| |+.+|++.+... ..+.... .+ ++ |
T Consensus 157 ~~~~~-~~~i~~lR~iKs~~E-------------------I~~mr~A~~i~~--~a~~~~~---~~---i~-------p- 200 (427)
T 3ig4_A 157 TIGNV-YPNICELRVFKTDEE-------------------IEIIKEAIAVTK--DGIYNVL---KH---AK-------A- 200 (427)
T ss_dssp EEEEC-HHHHHHHHTSCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HH---CC-------S-
T ss_pred eEeEh-HHHHHHHHhcCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HH---cc-------C-
Confidence 89988 889999999999998 777776654311 1110000 00 00 1
Q ss_pred eeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCC
Q 006890 212 VHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSC 284 (627)
Q Consensus 212 ~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~ 284 (627)
.+++.++...++..+...|....+|..+ ++++.+.. |..+ ..++.|.+|.+.
T Consensus 201 --------------G~tE~el~~~~~~~~~~~G~~~~~f~~i------vasG~n~~~~H~~~~~~~l~~GdlvliD~G~- 259 (427)
T 3ig4_A 201 --------------DMMEYELEAQFDFTLKSSGIKHHAFNTI------LASGKNATVLHYEDNDAQIQNGDLVLLDLGA- 259 (427)
T ss_dssp --------------SEEHHHHHHHHHHHHHHTTCCEESSCCE------EEEGGGGGSTTCCCCCSEECTTCEEEEEECE-
T ss_pred --------------CCCHHHHHHHHHHHHHHcCCCCCCCCCE------EEECccccccccCcccccCCCCCEEEEEeee-
Confidence 2455666666666666778777778776 44444433 3321 467888999863
Q ss_pred cHHHHhhcCCC--eEEec-CCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Q 006890 285 SYALYSKLNSD--KVLLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKK 361 (627)
Q Consensus 285 ~~~~~~~l~~~--~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 361 (627)
.+ ...... ..+.. ..+ ++. .|++..+.-.|....++.
T Consensus 260 ~~---~gY~sDitRT~~v~G~~--------s~~----~~~~y~~vl~a~~~~i~~------------------------- 299 (427)
T 3ig4_A 260 QK---DYYNADISYTFPANGTF--------SSR----QKQIYNIVLNALKETTEI------------------------- 299 (427)
T ss_dssp EE---TTEECCEEEEEETTSCC--------CHH----HHHHHHHHHHHHHHHHHT-------------------------
T ss_pred EE---CcEEEEEEEEEecCCCC--------CHH----HHHHHHHHHHHHHHHHHH-------------------------
Confidence 11 111111 11111 111 222 244444444444444333
Q ss_pred cCCCCCcCHHHHHHHHHHHHHhh---cCCC------CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceec
Q 006890 362 HSGTVKLTEVTVSDKLESFRASK---EHFR------GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQ 432 (627)
Q Consensus 362 ~~~~~g~tE~ei~~~l~~~~~~~---~g~~------~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~ 432 (627)
.+||++-.++...+.+...+. .|+. +.-|..-++-|- +--.|-.|. ..+.+|++|-++.+.-|....
T Consensus 300 --~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~i-Gl~vhe~~~-~~~~~L~~GMV~tiEPgiy~~ 375 (427)
T 3ig4_A 300 --IKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFL-GLDTHDVGT-YKDRVLEEGMVITIEPGLYIE 375 (427)
T ss_dssp --CCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBC-SSSSSCCCC-CTTCBCCTTCEEEECCEEEEG
T ss_pred --ccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcC-CcCCCcCCC-CCCCEeCCCCEEEECCEEEEC
Confidence 378999999988887755332 1221 111211111111 112454443 345899999999999987654
Q ss_pred --CcccceEEEEecC
Q 006890 433 --DGTTDITRTFHFG 445 (627)
Q Consensus 433 --gy~~D~tRT~~~G 445 (627)
|+..-+.-|+++.
T Consensus 376 ~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 376 EESIGIRIEDDILVT 390 (427)
T ss_dssp GGTEEEECBEEEEEC
T ss_pred CCceEEEEeeEEEEe
Confidence 3344566677774
|
| >3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.5e-11 Score=108.29 Aligned_cols=126 Identities=15% Similarity=0.130 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
+|++++|+.|+++|+|+++++++.|++||||++|+... .| .+++|+.+ +++|+++.++..++.++ . +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~e-r~---~~l~v~~~g~~~l~~~~~y~~~a~~~---~-~~~i~ 74 (132)
T 3o5v_A 3 AKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHE-RQ---LFLFVYHDLAPVLFVPALEVARASQA---I-SFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCTT-SC---CEEEEESSSCCEEEEEGGGHHHHHHH---C-CSCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCcc-ce---EEEEEeCCCCEEEEeehhhhHHHHhc---C-CCcEE
Confidence 69999999999999999999999999999999986421 12 57888865 79999999886654332 1 56778
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAK 308 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r 308 (627)
.|.+..++...++ ..+.. ....+||+|...+|+..++.|.+ .++++++..+..+|
T Consensus 75 ~~~d~~~~~~~l~-~~l~~----~~~~~ig~e~~~~~~~~~~~L~~~~~~~~~~~~~~v~~lR 132 (132)
T 3o5v_A 75 GYVDSENPWEKIK-AVLPN----TAAKTIYAEFDHLNVNKFHGLQTIFSGQFNNLTPYVQGMR 132 (132)
T ss_dssp EECTTSCHHHHHH-HHCSC----CCCSEEEECTTTCCHHHHHHHHTTCCSEEEECHHHHHTC-
T ss_pred EEECCCCHHHHHH-HHHhh----ccCCeEEEecCCCCHHHHHHHHHhCCCceeccHHHHHHhC
Confidence 8866544444343 22322 13468999988899988877644 57888877777765
|
| >3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=4.9e-11 Score=107.26 Aligned_cols=126 Identities=16% Similarity=0.123 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
+|++++|+.|+++|+|+++++++.|++||||+.|+.. ..| .+++|+.+ +++|+++.++..++.++ . +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~-er~---~~l~v~~~g~~~l~~~~~y~~~a~~~---~-~~~v~ 74 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDPH-ERQ---MFLFVYEDRDPILFVPALEVSRAKQS---V-PFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCCT-TSC---CEEEEESSSCCEEEEEGGGHHHHHHH---C-SSCEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCCC-cce---EEEEEeCCCCEEEEEeccchHHHHhc---C-CCcEE
Confidence 6999999999999999999999999999999997641 122 36778765 79999999886654333 2 56778
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAK 308 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r 308 (627)
.|.+..++...++. .+.. .+..+||+|...+|+..++.|.+ .++++++..+..+|
T Consensus 75 ~~~d~~~~~~~l~~-~l~~----~~~~~ig~e~~~~~~~~~~~L~~~~~~~~~~~~~~v~~lR 132 (132)
T 3ooo_A 75 GYIDSENPWQKIAS-NLPS----FSVSKVLAEFDNLNVTKFQGLQTVFDGHFENLTPYIQNMR 132 (132)
T ss_dssp EECTTSCHHHHHHH-HCSC----CCCSEEEECTTTCCHHHHHHHHHHCCSEEEECCHHHHTTC
T ss_pred EEeCCCCHHHHHHH-HHhh----ccCCeEEEecCCcCHHHHHHHHHhCCcceechHHHHHhcC
Confidence 88654444443432 2322 13468999988899988776543 68888888887776
|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.6e-11 Score=136.69 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC--------ceEEEEeCCceEEEEcchhHH-
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS--------AGLALITMNEALLWTDGRYFL- 72 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs--------~g~~vvt~~~a~l~tD~RY~~- 72 (627)
.+|+++||+.|++++ +|++||+++ .++.||+||+|+ .++++|+.+++.||+|.++..
T Consensus 179 ~~rl~~lr~~m~e~~--~dallit~~------------~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~ 244 (623)
T 3ctz_A 179 KDKVADLRLKMAERN--VMWFVVTAL------------DEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDA 244 (623)
T ss_dssp HHHHHHHHHHHHTTT--EEEEEECCH------------HHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGS
T ss_pred HHHHHHHHHHHHHcC--CCEEEECCH------------HHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCH
Confidence 579999999999987 999999999 799999999986 267999999999999998754
Q ss_pred -HHhcccc--------CcEEEEEcCCCCCHHHHHHhhCC---CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcCh
Q 006890 73 -QATQELT--------GEWKLMRMLEDPAVDVWMANNLP---NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNL 140 (627)
Q Consensus 73 -qA~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~---~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~l 140 (627)
+++..+. ..+++..+.+ +.+.|.+... ..++||+|+. +++..++ .++. ..++++. .++
T Consensus 245 ~~~~~~l~~~~~~p~~~~v~v~~y~~---~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~----~l~~-~~~~v~~-~~~ 314 (623)
T 3ctz_A 245 PSVKEHLLLDLGLEAEYRIQVHPYKS---ILSELKALCADLSPREKVWVSDK-ASYAVSE----TIPK-DHRCCMP-YTP 314 (623)
T ss_dssp HHHHHHTTTTSCCCGGGCEEEECGGG---HHHHHHHHHHTCCTTCEEEEETT-SBHHHHH----HSCG-GGEEEES-SCH
T ss_pred HHHHHHHhhccccccCCceEEEEhHH---HHHHHHHHHhcccCCeEEEECch-hhHHHHH----hccc-cceEEec-ccH
Confidence 5555542 2356553322 3455554432 2368999987 5655444 3322 2367777 789
Q ss_pred hhHhhhcCCCCC
Q 006890 141 VDKVWKNRPPVE 152 (627)
Q Consensus 141 id~lr~~k~~~e 152 (627)
+..+|.+|++.|
T Consensus 315 i~~~R~iK~~~E 326 (623)
T 3ctz_A 315 ICIAKAVKNSAE 326 (623)
T ss_dssp HHHHHHSCCHHH
T ss_pred HHHHHhcCCHHH
Confidence 999999999998
|
| >3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-10 Score=103.79 Aligned_cols=130 Identities=10% Similarity=0.081 Sum_probs=91.3
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
.|++++|+.|+++|+|+++++++.|+.|||||.|+.. ..| .+++|+.+ +++|+++.++..++.++ ..+.++.
T Consensus 4 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~-er~---~~llv~~~g~~~l~~~~~~~~~a~~~---~~~~~i~ 76 (140)
T 3i7m_A 4 TKLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPI-ERV---LALVVFPDQDPFIFAPALEVEVIKET---GWQFPVI 76 (140)
T ss_dssp CHHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCCC-SSC---CEEEECSSSCCEEEEEGGGHHHHHTT---TCCSCEE
T ss_pred hHHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCCc-cce---EEEEEeCCCCEEEEEecccHHHHHhc---cCcCcEE
Confidence 3899999999999999999999999999999997642 122 46778755 79999999876544222 2456777
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEE-ecCCccchhhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVL-LQQSPLALAKA 309 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~-~~~~~i~~~r~ 309 (627)
.|.+..++...++. .+...+ ...++||+|...+++..++.|. +.+++ +++..+..+|+
T Consensus 77 ~~~d~~~~~~~l~~-~l~~~~--~~~~~ig~e~~~~~~~~~~~L~~~l~~~~~v~~~~~~i~~lR~ 139 (140)
T 3i7m_A 77 GYLDHENPWAMIAD-QVKQRH--VNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMRG 139 (140)
T ss_dssp EECTTSCHHHHHHH-HHHHTT--CCCSEEEECTTTSCHHHHHHHHTTSSSCEEEEECHHHHHHC--
T ss_pred EEcCCCCHHHHHHH-HHHHhC--CCCCeEEEccCCCCHHHHHHHHHHCCCCEEecCHHHHHHHHHc
Confidence 77654333322221 111110 1357899998889998887664 45888 98888888886
|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.3e-06 Score=95.90 Aligned_cols=69 Identities=10% Similarity=0.067 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcCCC--CceEEEEcCCCC-----cCccCcCccccccccccccccCceEEEEeC--CceEEEEcchh
Q 006890 2 AEILAALRSLMSSHDP--PLHALVVPSEDY-----HQSEYVSARDKRREFVSGFTGSAGLALITM--NEALLWTDGRY 70 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~--~~Da~li~~~d~-----h~sey~~~~~~~~~ylTGFtgs~g~~vvt~--~~a~l~tD~RY 70 (627)
.+|+++|++.|++++. +.|++||++... .-++|.-..+.+.+|||||.....++||.. ++..||++.+.
T Consensus 25 ~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~~~~~L~~~~~~ 102 (494)
T 2iw2_A 25 ALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLP 102 (494)
T ss_dssp HHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEEETTTCCEEEEECCCC
T ss_pred HHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEEEccCCeEEEEECCCC
Confidence 5799999999998640 146999977654 235565556678999999998777777743 67889986544
|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
Probab=97.52 E-value=1.1e-05 Score=87.07 Aligned_cols=137 Identities=11% Similarity=0.116 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcC-----ccCcCcccccccccccccc-CceEEEEeCC-ceEEEEcch--hHHH
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQ-----SEYVSARDKRREFVSGFTG-SAGLALITMN-EALLWTDGR--YFLQ 73 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~-----sey~~~~~~~~~ylTGFtg-s~g~~vvt~~-~a~l~tD~R--Y~~q 73 (627)
++.+++|++|++.+ .|+++|.++.+.. .+|.=..+.+-+|+|||.- ..+++++..+ ++.||.... |+..
T Consensus 14 ~~~~r~~~~l~~~~--~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~~ 91 (451)
T 3rva_A 14 ELQARTREALQREG--LDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHK 91 (451)
T ss_dssp HHHHHHHHHHHHHT--CSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTSC
T ss_pred HHHHHHHHHHHhCC--CCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhhc
Confidence 46788999999887 9988887663221 2333344555678889976 4456666443 556665432 3332
Q ss_pred Hhc---cc-cCcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 74 ATQ---EL-TGEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 74 A~~---~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
.+. +. ...+.+....... + +.+.|+.. .++++.+...+...+..+ ....++++ .++|+++|.+|
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~---~-~~~~l~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~-~~~l~~lR~iK 160 (451)
T 3rva_A 92 VPPEPNDFWTDSFDIKLLQQAD---A-VEKFLPYDKSRFAYVGEYIEVAKALGF------DNVNPDRV-LHYLHYQRAYK 160 (451)
T ss_dssp CCCSCCSTTGGGSEEEEESSGG---G-GGGGSCSCGGGEEEESSCHHHHHHHTC------SCBSCHHH-HHHHHHHHTSC
T ss_pred cccCcchhHHhccCeEEEecHH---H-HHHHHhhccCceEEEccCcCHHHhhhh------cccCchHH-HHHHHHHHhcC
Confidence 211 11 0012333222111 1 33444432 346666544443222111 12345566 68899999999
Q ss_pred CCCC
Q 006890 149 PPVE 152 (627)
Q Consensus 149 ~~~e 152 (627)
++.|
T Consensus 161 s~~E 164 (451)
T 3rva_A 161 TDYE 164 (451)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9998
|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=2.7e-05 Score=85.08 Aligned_cols=137 Identities=10% Similarity=0.073 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcC-----ccCcCcccccccccccccc-CceEEEEeCC-ceEEEEcch--hHHH
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQ-----SEYVSARDKRREFVSGFTG-SAGLALITMN-EALLWTDGR--YFLQ 73 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~-----sey~~~~~~~~~ylTGFtg-s~g~~vvt~~-~a~l~tD~R--Y~~q 73 (627)
++.++++++|++.+ .|+++|.+..+.. .+|.=..+.+-+|+|||+- ..+++++..+ ++.||.... |+..
T Consensus 14 ~~~~r~~~~l~~~~--~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g 91 (517)
T 3l24_A 14 TLQKRTREIIEREN--LDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHK 91 (517)
T ss_dssp HHHHHHHHHHHHTT--CSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSC
T ss_pred HHHHHHHHHHHhCC--CCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhc
Confidence 46788999999987 9988777663321 2344445556678999976 4556666433 556665432 3332
Q ss_pred Hhc---cc-cCcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 74 ATQ---EL-TGEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 74 A~~---~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
.+. +. ...+.+....... + +.+.|+.. .++++.+...+...+..+ ....++++ .++|+++|.+|
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~---~-~~~~L~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~-~~~l~~lR~iK 160 (517)
T 3l24_A 92 VPDEPNEYWADYFDIELLVKPD---Q-VEKLLPYDKARFAYIGEYLEVAQALGF------ELMNPEPV-MNFYHYHRAYK 160 (517)
T ss_dssp CCCCCCSGGGGGSEEEEESSGG---G-CGGGSCSCCTTEEEESSCHHHHHHHTC------CCBSCHHH-HHHHHHHHTSC
T ss_pred cccCchhhhhhccCeEEEcCHH---H-HHHHHhhccCceEEEcCCcCHHHhhhh------ccCCchhH-HHHHHHHHhcC
Confidence 111 10 0112333222111 1 23334332 346666544443222111 12355566 68899999999
Q ss_pred CCCC
Q 006890 149 PPVE 152 (627)
Q Consensus 149 ~~~e 152 (627)
++.|
T Consensus 161 s~~E 164 (517)
T 3l24_A 161 TQYE 164 (517)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9998
|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.081 Score=55.04 Aligned_cols=89 Identities=12% Similarity=0.074 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Ccccccc----cccccCccccCCCcCCCCCCCCcc
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGH----GVGSYLNVHEGPQSISFKPRNVPI 524 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GH----gvG~~l~vhE~P~~~~~~~~~~~l 524 (627)
..|++-+.+.+++..+...++| |++-.+|+..+.+.+.+.|-. -..|.|+ +++.. -+|--|.. .+++.+|
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~~-v~Hg~P~~---~~~~~~L 121 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNSC-AAHYTVNP---GEQDIVL 121 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETTE-EECCCCCT---TCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCCE-EEecCCCC---CCCCeEe
Confidence 4688888889999999999998 999999999999999887652 1112222 22211 12444532 1156789
Q ss_pred cCCcEEeeCceeeecCccE
Q 006890 525 HASMTATDEPGYYEDGNFG 543 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~G 543 (627)
++|.++.+.-|.+.+|..|
T Consensus 122 ~~GDiV~ID~G~~~dGY~s 140 (358)
T 3fm3_A 122 KEDDVLKIDFGTHSDGRIM 140 (358)
T ss_dssp CTTCEEEEEEEEEETTEEE
T ss_pred cCCCEEEEEeeEEECCEEE
Confidence 9999999999999877443
|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=92.39 E-value=0.36 Score=49.70 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--------CcccccccccccCccccCCCcCCCCCCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--------YRHGTGHGVGSYLNVHEGPQSISFKPRN 521 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--------~~h~~GHgvG~~l~vhE~P~~~~~~~~~ 521 (627)
.+|++-..+.+++..+.+.++| |++-.+|+.++.+.+.++|.. |+..++-|... -.|.. .+++
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikp-G~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~-----~~~H~---~~~~ 141 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKP-GITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNE-----VICHG---IPDS 141 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-----EEECC---CCCS
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccc-----cccCC---CCCC
Confidence 3677788888899999999997 999999999999999998862 11111111110 01221 1267
Q ss_pred CcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 522 VPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
.+|++|.++.+.-|.+..| |-.=+.-|+.|
T Consensus 142 ~~l~~GD~v~iD~g~~~~G-Y~sD~tRT~~v 171 (337)
T 4fuk_A 142 RELEEGDILNIDVSSYLNG-FHGDLNETVFI 171 (337)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred ccccCCCEEEEecceeECC-EEEeeeeeEEe
Confidence 8899999999999998765 33344555554
|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=91.21 E-value=0.87 Score=44.89 Aligned_cols=95 Identities=13% Similarity=-0.025 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++-..+.+++.++.+.++| |++-.+|++.++..+.+.|-... .+....+. ...+. .|. ..+++.+|+
T Consensus 13 mr~A~~i~~~a~~~~~~~ikp-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~H---~~~~~~~l~ 86 (264)
T 3tb5_A 13 MDESGELLADVHRHLRTFIKP-GITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATC--CSINDEICH---GFPRKKVLK 86 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCcceE--ECCcccccC---CCCCCcccc
Confidence 456666777888899999997 99999999999999999885210 11111111 11111 111 122678999
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|.++.+.-|....| |-.=+.-|+.|
T Consensus 87 ~Gdlv~iD~g~~~~G-Y~sD~tRT~~v 112 (264)
T 3tb5_A 87 DGDLIKVDMCVDLKG-AISDSCWSYVV 112 (264)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEeccceecc-eeeeccccccc
Confidence 999999999987654 44556666666
|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
Probab=88.64 E-value=2.3 Score=43.42 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC---c-ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY---R-HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~---~-h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|..- . ++..-.|. ..+++ -|. +.+++.+|+
T Consensus 84 mR~A~~ia~~al~~~~~~i~p-Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~--sg~n~~~~H---~~p~~~~L~ 157 (329)
T 2b3h_A 84 MRLVCRLAREVLDVAAGMIKP-GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCC--TSVNEVICH---GIPDRRPLQ 157 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEE--ecCCCCcCC---CCCCCcCCC
Confidence 345556666778888889997 9999999999999999988521 0 01111111 11111 111 112567899
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|.++.+.-|.+..| |-.=+.-|+.|
T Consensus 158 ~GDiv~iD~G~~~~G-Y~sD~tRT~~v 183 (329)
T 2b3h_A 158 EGDIVNVDITLYRNG-YHGDLNETFFV 183 (329)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEeeEEECC-EEEeeEEEEEe
Confidence 999999999987754 44456666666
|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
Probab=88.18 E-value=1.2 Score=44.80 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCCCCCCCcccCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHAS 527 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~G 527 (627)
..|++-..+.+++..+.+.++| |++-.+|+..+.+.+.+.|.. |+..+ +++.. .+|-.|.. . ++.+|++|
T Consensus 5 ~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~v--s~n~~-~~H~~p~~---~-~~~~L~~G 76 (295)
T 1xgs_A 5 KLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEI-AAHYTPYK---G-DTTVLKEG 76 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTE-EECCCCCT---T-CCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEE--eeCCc-cccccCCC---C-CCccccCC
Confidence 4677888888899999999997 999999999999999998863 33222 23311 12333321 0 35789999
Q ss_pred cEEeeCceeeecCccEEEEeEeeEEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.++.+.-|....| |-.=+.-|+.|.
T Consensus 77 Div~iD~G~~~~G-Y~sD~tRT~~vG 101 (295)
T 1xgs_A 77 DYLKIDVGVHIDG-FIADTAVTVRVG 101 (295)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEETT
T ss_pred CEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 9999999987654 334455566653
|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=87.76 E-value=2.5 Score=43.78 Aligned_cols=96 Identities=14% Similarity=0.002 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|..-. ++..-.|+ ..+++ -|. ..+++.+|+
T Consensus 112 mR~A~~ia~~al~~~~~~ikp-GvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~i~H---~~p~~r~L~ 185 (368)
T 3s6b_A 112 IREACILGRKTLDYAHTLVSP-GVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEIVCH---GIPDYRPLK 185 (368)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCcccccc---CCCCCcccc
Confidence 355566666777888889997 99999999999999999886210 01111121 11221 111 122567899
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+|.++.+.-|.+..| |-.=+.-|++|.
T Consensus 186 ~GDiV~iD~G~~~~G-Y~sDitRT~~vG 212 (368)
T 3s6b_A 186 SGDIINIDISVFYKG-VHSDLNETYFVG 212 (368)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCEEEEEEeEEECc-EEEEEEEEEEEC
Confidence 999999999988754 445567777774
|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
Probab=87.24 E-value=3.4 Score=40.52 Aligned_cols=96 Identities=11% Similarity=0.024 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc-cc-cccc--ccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR-HG-TGHG--VGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~-h~-~GHg--vG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++...+.+++.++.+.++| |++-.+|.+.+...+.+.|..-. .+ .|+. +. ...+. ......+++.+|++
T Consensus 17 ~r~A~~i~~~~~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~--~~~H~~p~~~~l~~ 91 (262)
T 3mx6_A 17 MRAAGKLAAETLDFITDHVKP-NVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSIC--TSINH--VVCHGIPNDKPLKN 91 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETT--EEECCCCCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--ecccc--cccCCCCCCcccCC
Confidence 455666667778888889997 99999999999999998876210 00 1111 11 11111 11112225678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.+.-|....| |-.-+..|+.|
T Consensus 92 Gd~v~iD~G~~~~G-Y~sD~tRT~~v 116 (262)
T 3mx6_A 92 GDIVNIDVTVILDG-WYGDTSRMYYV 116 (262)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 99999998886544 44556666666
|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
Probab=86.78 E-value=3.6 Score=40.93 Aligned_cols=96 Identities=17% Similarity=0.067 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC--cccccc--cccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY--RHGTGH--GVGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~--~h~~GH--gvG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++...+.+++.++.+.++| |++-.+|...+...+.+.|..- ....|+ .|+ ...+. ......+++.+|++
T Consensus 50 ~r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~--~~~H~~p~~~~l~~ 124 (285)
T 3pka_A 50 MRVAGRIAAGALAEAGKAVAP-GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCC--TSLNE--VICHGIPDSTVITD 124 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETT--EEECCCCCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCceE--ecccc--eeecCCCCCcccCC
Confidence 355555666677788889997 9999999999999999988621 000111 121 11111 01111225678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.+.-|....| |-.-+..|+.|
T Consensus 125 Gd~v~iD~G~~~~G-Y~sD~tRT~~v 149 (285)
T 3pka_A 125 GDIVNIDVTAYIGG-VHGDTNATFPA 149 (285)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999998886543 44556666666
|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
Probab=84.71 E-value=4.5 Score=39.26 Aligned_cols=92 Identities=20% Similarity=0.118 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--------CcccccccccccCccccCCCcCCCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--------YRHGTGHGVGSYLNVHEGPQSISFKPRNV 522 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--------~~h~~GHgvG~~l~vhE~P~~~~~~~~~~ 522 (627)
.|++-..+.+++..+.+.++| |++-.+|+..+...+.+.|.. |+..+.=|.-. ...| +.|++.
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~-~~~H-------~~p~~~ 82 (252)
T 1qxy_A 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNE-EVAH-------GIPSKR 82 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETT-EEEC-------CCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCc-cccC-------CCCCCc
Confidence 455566666777888888997 999999999999999888762 22111111110 0112 122567
Q ss_pred cccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 523 PIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 523 ~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|++|.++.+.-|....| |-.-+..|+.|
T Consensus 83 ~l~~gd~v~iD~g~~~~g-y~sD~tRT~~v 111 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNG-YYADTGISFVV 111 (252)
T ss_dssp BCCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CcCCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 899999999999987654 55556777777
|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
Probab=83.99 E-value=5.1 Score=39.19 Aligned_cols=95 Identities=15% Similarity=0.088 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHH-HHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCC-Cc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLP-LWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRN-VP 523 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~-l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~-~~ 523 (627)
.|++-..+.+++..+.+.++| |++-.+|...+... +.+.|.... .+...-|. ...+. -|. +.|++ .+
T Consensus 13 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~ 86 (263)
T 2gg2_A 13 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVC--ISINEVVCH---GIPDDAKL 86 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSE--EEETTEEEC---CCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHhCCccccccccCCCcceE--ecccccccC---CCCCCCcC
Confidence 455556666777788888997 99999999999998 888775211 01111111 11111 111 11234 78
Q ss_pred ccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 524 IHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 524 l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|++|.++.+.-|....| |-.-+..|+.|
T Consensus 87 l~~gd~v~iD~G~~~~g-y~sD~tRT~~v 114 (263)
T 2gg2_A 87 LKDGDIVNIDVTVIKDG-FHGDTSKMFIV 114 (263)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999999999987643 55556677776
|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
Probab=82.65 E-value=6.9 Score=38.25 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--Cc--ccccccccccCcccc-CCCcCCCCCCCCc-c
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YR--HGTGHGVGSYLNVHE-GPQSISFKPRNVP-I 524 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~--h~~GHgvG~~l~vhE-~P~~~~~~~~~~~-l 524 (627)
.|++-..+.+++..+.+.++| |++-.+|+..+...+.+.|.. |. .+...-|. ...++ -|. +.|++.+ |
T Consensus 25 ~r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p~~~~~l 98 (262)
T 1o0x_A 25 MKKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEVVH---GLPLKEKVF 98 (262)
T ss_dssp HHHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBCSC---CCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCcceE--ecccccccC---CCCCCCccc
Confidence 344555556677778888887 999999999999999998862 21 11111121 11111 121 1225667 9
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 99 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 125 (262)
T 1o0x_A 99 KEGDIVSVDVGAVYQG-LYGDAAVTYIV 125 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEC
Confidence 9999999999887643 55556667766
|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=82.53 E-value=7.5 Score=38.56 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--Cccccccc--ccccCcccc-CCCcCCCCCC-CCcc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHG--VGSYLNVHE-GPQSISFKPR-NVPI 524 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHg--vG~~l~vhE-~P~~~~~~~~-~~~l 524 (627)
.|++...+.+++.++.+.++| |++-.+|.......+.+.|.. |....++. |+ ...+. .|.. .++ +.+|
T Consensus 43 ~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H~---~p~~~~~l 116 (286)
T 3tav_A 43 MAAAGSIVGAALVAVRDAAKA-GVSTLELDQVAESVIREAGAVPSFLGYHGFPASIC--SSVNDQVVHG---IPSATAVL 116 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTBCSCC---CCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCCceE--EecCccccCC---CCCCCccc
Confidence 455666666777888889997 999999999999999998862 11001111 11 11111 1221 224 6889
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++|.++.+.-|....| |-.-+.-|+.|
T Consensus 117 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 143 (286)
T 3tav_A 117 ADGDLVSIDCGAILDG-WHGDSAWTFAV 143 (286)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEeeEEEEEC
Confidence 9999999998886543 44556666666
|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
Probab=82.39 E-value=1.5 Score=46.09 Aligned_cols=99 Identities=13% Similarity=0.022 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCc------ccccccccccCcccc-CCCcCC-CCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYR------HGTGHGVGSYLNVHE-GPQSIS-FKPRN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~------h~~GHgvG~~l~vhE-~P~~~~-~~~~~ 521 (627)
.|++-..+.+++..+...++| |++-.+|+..+.+.+.+.|- .|. .+..+.+. ..+.+ -|..+. .+.++
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~--vS~N~~v~H~~P~~~d~~ 104 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS--ISVNNCVCHFSPLKSDQD 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE--EEETTEEECCCCCTTSCC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE--EeCCcccccCCCCCCCCC
Confidence 455556666777888888997 99999999999998888653 121 22222222 22221 111111 01024
Q ss_pred CcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 522 VPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.+|++|.++.+.-|....| |-.=+..|++|.
T Consensus 105 ~~L~~GDiV~ID~G~~~~G-Y~sD~tRT~~vG 135 (401)
T 2q8k_A 105 YILKEGDLVKIDLGVHVDG-FIANVAHTFVVD 135 (401)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEETT
T ss_pred cccCCCCEEEEEEEEEECC-EEEEEEEEEEEC
Confidence 7899999999999987755 444566777775
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 627 | ||||
| d1pv9a2 | 221 | d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal | 2e-19 | |
| d2gg2a1 | 262 | d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc | 2e-15 | |
| d1o0xa_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Thermoto | 3e-14 | |
| d2v3za2 | 264 | d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal | 4e-12 | |
| d1chma2 | 246 | d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter | 4e-11 | |
| d1b6aa2 | 295 | d.127.1.1 (A:110-374,A:449-478) Methionine aminope | 7e-08 | |
| d1xgsa2 | 218 | d.127.1.1 (A:1-194,A:272-295) Methionine aminopept | 1e-06 | |
| d1qxya_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Staphylo | 1e-05 |
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 85.0 bits (209), Expect = 2e-19
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 36/245 (14%)
Query: 311 KNPVELDGLKKA-HIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLT 369
K E++ ++KA I D A + ++EI T
Sbjct: 1 KTKEEIEIIEKACEIADKA--------VMAAIEEI--------------------TEGKR 32
Query: 370 EVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGA 429
E V+ K+E + +F TI + G +A+ H + D + + D GA
Sbjct: 33 EREVAAKVEYLMKMNGAEKP-AFDTIIASGHRSALPHGVASDKRIERGD---LVVIDLGA 88
Query: 430 QYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWK 489
Y +DITRT G P+ ++ Y VL+ A P G LD +AR + +
Sbjct: 89 LYNHYNSDITRTIVVGSPNEKQREIYEIVLEAQKRAVEAAKP-GMTAKELDSIAREIIKE 147
Query: 490 YGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENV 549
YG G G L +HE P+ + + M T EPG Y G+R+E+
Sbjct: 148 YGYGDYFIHSLGHGVGLEIHEWPRISQYDET--VLKEGMVITIEPGIYIPKLGGVRIEDT 205
Query: 550 LVVTD 554
+++T+
Sbjct: 206 VLITE 210
|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Escherichia coli [TaxId: 562]
Score = 74.2 bits (181), Expect = 2e-15
Identities = 42/264 (15%), Positives = 74/264 (28%), Gaps = 45/264 (17%)
Query: 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIY-GASGYFLEGEATKEKKHSGTVKL 368
IK P +++ ++ A + + L+ + G S L+
Sbjct: 3 IKTPEDIEKMRVA-----GRLAAEV--LEMIEPYVKPGVSTGELDRICNDYI-------- 47
Query: 369 TEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428
+ A +P + N + H P + I D
Sbjct: 48 --------VNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDD--AKLLKDGDIVNIDVT 97
Query: 429 AQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW 488
D ++ F GKP+ + + V P G + + +
Sbjct: 98 VIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAAIQKFVE 156
Query: 489 KYGLDY-RHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY---------- 537
G R GHG+G + + NV + MT T EP
Sbjct: 157 AEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK 216
Query: 538 -------EDGNFGIRLENVLVVTD 554
+D + + E+ +VVTD
Sbjct: 217 DGWTVKTKDRSLSAQYEHTIVVTD 240
|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Thermotoga maritima [TaxId: 2336]
Score = 70.8 bits (172), Expect = 3e-14
Identities = 50/264 (18%), Positives = 82/264 (31%), Gaps = 46/264 (17%)
Query: 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLT 369
IK P E++ +KKA G A+ + + K + G + + +E
Sbjct: 4 IKTPSEIEKMKKA----GKAVAVALREVRKVIVP--GKTAWDVETL-------------- 43
Query: 370 EVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGA 429
V + + R + + V N ++H P E + D GA
Sbjct: 44 ---VLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLPLKEKVFKEGDI--VSVDVGA 98
Query: 430 QYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWK 489
YQ D T+ G+ K + + P G +
Sbjct: 99 VYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESV 158
Query: 490 YGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN--VPIHASMTATDEPGYYE--------- 538
R GHGVG +HE PQ ++ V + MT EP E
Sbjct: 159 GFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKE 216
Query: 539 --------DGNFGIRLENVLVVTD 554
DG+ E+ +++T+
Sbjct: 217 DGWTAVTVDGSRCAHFEHTILITE 240
|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Escherichia coli [TaxId: 562]
Score = 64.7 bits (156), Expect = 4e-12
Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 29/211 (13%)
Query: 369 TEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428
E + ++ ++ R S+ TI G N I+HY+ + D + L D+G
Sbjct: 31 FEYHLEGEIHHE-FNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGD---LVLIDAG 86
Query: 429 AQYQDGTTDITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTC----GHTLDILA 483
+Y+ DITRTF GK + ++ Y VL+ P + G + I+
Sbjct: 87 CEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMV 146
Query: 484 RLPLWKYGLDY-----------RHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATD 532
+ L R HG+ +L + + + R+ + M T
Sbjct: 147 SGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTV 206
Query: 533 EPGYY---------EDGNFGIRLENVLVVTD 554
PG Y + GIR+E+ +V+T+
Sbjct: 207 APGLYIAPDAEVPEQYRGIGIRIEDDIVITE 237
|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Creatinase, catalytic (C-terminal) domain species: Pseudomonas putida [TaxId: 303]
Score = 61.3 bits (147), Expect = 4e-11
Identities = 37/252 (14%), Positives = 68/252 (26%), Gaps = 33/252 (13%)
Query: 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIY-GASGYFLEGEATKEKKHSGTVKL 368
IK+ E ++ A I ++ + Y + AT+ +
Sbjct: 2 IKSAEEHVMIRHG-----ARIADIG--GAAVVEALGDQVPEYEVALHATQAMVRAI---- 50
Query: 369 TEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428
+ E + T G N H + + D I +
Sbjct: 51 ------------ADTFEDVELMDTWTWFQSGINTDGAHNPVTTRKVNKGD---ILSLNCF 95
Query: 429 AQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL- 487
T + RT S + ++ H A + P C L + L
Sbjct: 96 PMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLK 155
Query: 488 WKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHASMTATDEPGYY----EDGNF 542
G GH G+ + + + + + M + EP G
Sbjct: 156 HDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAG 215
Query: 543 GIRLENVLVVTD 554
G R ++L+V +
Sbjct: 216 GYREHDILIVNE 227
|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (123), Expect = 7e-08
Identities = 32/203 (15%), Positives = 54/203 (26%), Gaps = 19/203 (9%)
Query: 369 TEVTVSDKLESF----RASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYL 424
T + + +KLE GL+FPT S+ AA HY+P + + + I
Sbjct: 83 TMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAA--HYTPNAGDTTVLQYDDICK 140
Query: 425 CDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILAR 484
D G D T F I G + +
Sbjct: 141 IDFGTHISGRIIDCAFTVTFNPKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVME 200
Query: 485 LPLWKYGL------DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY- 537
+ R+ GH +G Y I + E
Sbjct: 201 SYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGST 260
Query: 538 ------EDGNFGIRLENVLVVTD 554
G++ + E+ +++
Sbjct: 261 GKGVVDIKGSYTAQFEHTILLRP 283
|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 47.4 bits (111), Expect = 1e-06
Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 10/189 (5%)
Query: 369 TEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSG 428
+ +++ +E E +FP S+ AA T + D G
Sbjct: 29 LLLELAESIEKMI--MELGGKPAFPVNLSINEIAAHYTPYKGDTTV--LKEGDYLKIDVG 84
Query: 429 AQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW 488
D T G L I++ A G ++ R +
Sbjct: 85 VHIDGFIADTAVTVRVGMEEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGF 144
Query: 489 KYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHASMTATDEPGYY--EDGNFGIR 545
K + +GH + Y ++P + + EP +
Sbjct: 145 KP---IVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGARNGIVAQ 201
Query: 546 LENVLVVTD 554
E+ ++V
Sbjct: 202 FEHTIIVEK 210
|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Staphylococcus aureus [TaxId: 1280]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 36/264 (13%), Positives = 66/264 (25%), Gaps = 45/264 (17%)
Query: 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLT 369
+K EL LK+ G + + + G + L+ A +
Sbjct: 3 VKTEEELQALKEI----GYICAKVRNTMQAATKP--GITTKELDNIAKEL---------- 46
Query: 370 EVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGA 429
F + + + + + + D A
Sbjct: 47 ----------FEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSA 96
Query: 430 QYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGN-AVFPNGTCGHTLDILARLPLW 488
D +F G+ K V V P + +
Sbjct: 97 LKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQ 156
Query: 489 KYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRN-VPIHASMTATDEPGYYE--------- 538
++ TGHGVG L+ F P++ + M EP
Sbjct: 157 NDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGK 216
Query: 539 --------DGNFGIRLENVLVVTD 554
D +F ++E+ ++VT
Sbjct: 217 NEWAFETSDKSFVAQIEHTVIVTK 240
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 627 | |||
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 100.0 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 100.0 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 100.0 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 100.0 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 100.0 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 100.0 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 100.0 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 100.0 | |
| d1pv9a1 | 117 | Aminopeptidase P {Archaeon Pyrococcus furiosus [Ta | 99.73 | |
| d1kp0a1 | 156 | Creatinase {Actinobacillus sp. [TaxId: 41114]} | 99.66 | |
| d1chma1 | 155 | Creatinase {Pseudomonas putida [TaxId: 303]} | 99.64 | |
| d1chma1 | 155 | Creatinase {Pseudomonas putida [TaxId: 303]} | 99.1 | |
| d1kp0a1 | 156 | Creatinase {Actinobacillus sp. [TaxId: 41114]} | 99.07 | |
| d1pv9a1 | 117 | Aminopeptidase P {Archaeon Pyrococcus furiosus [Ta | 99.06 | |
| d2v3za1 | 176 | Aminopeptidase P {Escherichia coli [TaxId: 562]} | 95.46 | |
| d2v3za1 | 176 | Aminopeptidase P {Escherichia coli [TaxId: 562]} | 94.01 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 92.89 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 91.16 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 91.09 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 87.87 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 84.78 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 83.78 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 82.31 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 80.43 |
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=4.4e-46 Score=366.73 Aligned_cols=219 Identities=28% Similarity=0.403 Sum_probs=204.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCC
Q 006890 311 KNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGL 390 (627)
Q Consensus 311 K~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~ 390 (627)
|||+||+.||+|+++++.++..+++.+ ++|+||.|+++.+..... ..|....
T Consensus 1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i---------------------------~~G~tE~ei~~~~~~~~~-~~G~~~~ 52 (221)
T d1pv9a2 1 KTKEEIEIIEKACEIADKAVMAAIEEI---------------------------TEGKREREVAAKVEYLMK-MNGAEKP 52 (221)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHH-hcccccc
Confidence 899999999999999999998887764 799999999999988764 4566678
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccC
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~ 470 (627)
+|.+++++|.|++.+|+.|++ +++++||++++|+|++|.||++|++||+++|+|+++++++|+.+++++.+++++++
T Consensus 53 ~~~~~v~~g~~~~~~h~~~~~---~~i~~gd~v~id~~~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~~~~~~~~~~k 129 (221)
T d1pv9a2 53 AFDTIIASGHRSALPHGVASD---KRIERGDLVVIDLGALYNHYNSDITRTIVVGSPNEKQREIYEIVLEAQKRAVEAAK 129 (221)
T ss_dssp SSCCEEEEGGGGGSTTCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccccccccccc---ccccccceEEEecccccCccccCcceeeecCCccHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999986 89999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeE
Q 006890 471 PNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLEN 548 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd 548 (627)
| |+++++|+.++++.+++.|+ .+.|++|||+| +.+||.|.+... ++.+|+|||||++||++|.++.+|+|+||
T Consensus 130 p-G~~~~~v~~~~~~~~~~~g~~~~~~~~~Ghg~g--~~~~e~~~~~~~--~~~~L~~gMv~~iep~~~~~~~~g~r~Ed 204 (221)
T d1pv9a2 130 P-GMTAKELDSIAREIIKEYGYGDYFIHSLGHGVG--LEIHEWPRISQY--DETVLKEGMVITIEPGIYIPKLGGVRIED 204 (221)
T ss_dssp T-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEESTT--CCCBCCTTCEEEECCEEEETTTEEEECBE
T ss_pred C-CCcHHHHHHHHHhhhhhcccCCceeccccCCCC--cccchhcccccC--CCceeCCCcEEEECCEEEECCCCEEEEeE
Confidence 8 99999999999999999998 47999999999 999999986443 67899999999999999999999999999
Q ss_pred eeEEecCCcccccCCcceeeeeccccccc
Q 006890 549 VLVVTDANTKFNFGDKGYLSFEHITWAPY 577 (627)
Q Consensus 549 ~v~V~~~g~~~~~~~~~~~~fe~lT~~p~ 577 (627)
+|+||++|+ |+||..|+
T Consensus 205 ~v~Vte~G~------------e~Lt~~pr 221 (221)
T d1pv9a2 205 TVLITENGA------------KRLTKTER 221 (221)
T ss_dssp EEEECSSSE------------EESCCSCC
T ss_pred EEEECCCcc------------eECCCCCC
Confidence 999999997 99998885
|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Creatinase, catalytic (C-terminal) domain species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=1.9e-43 Score=353.53 Aligned_cols=227 Identities=17% Similarity=0.108 Sum_probs=200.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc---
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE--- 385 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~--- 385 (627)
+|||++||+.||+|+++++.++.++++.+ ++|+||.|+++.+.+...+..
T Consensus 1 ~IKs~~Ei~~iR~a~~i~~~~~~~~~~~i---------------------------~~G~te~ei~~~~~~~~~~~g~~~ 53 (246)
T d1chma2 1 MIKSAEEHVMIRHGARIADIGGAAVVEAL---------------------------GDQVPEYEVALHATQAMVRAIADT 53 (246)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHHHhcCcc
Confidence 58999999999999999999998887764 799999999999877553321
Q ss_pred --CCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHH
Q 006890 386 --HFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 386 --g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~ 463 (627)
.....+|.+++.+|++++.+|+.|++ +++++||++++|+|+.|+||++|+||||++|+|+++++++|+.+++++.
T Consensus 54 ~~~~~~~~~~~~~~~g~~~~~~h~~~~~---~~~~~gd~v~~d~g~~~~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~ 130 (246)
T d1chma2 54 FEDVELMDTWTWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHE 130 (246)
T ss_dssp CSSCCBCCCEEEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHH
T ss_pred cCccccccccccccccCccccccccCCC---ccccCCCEEEEeecccccccccceeeccccccchhhHHHHHHHHHHHHH
Confidence 22346788999999999999998876 8999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCC--CC-CCCcccCCcEEeeCceeee
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISF--KP-RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~--~~-~~~~l~~Gmv~siEPg~y~ 538 (627)
+++++++| |+++++|++++++.+++.|+ .+.|++|||+| +..|+.|..... .+ ++.+|+|||||++|||+|.
T Consensus 131 ~~~~~~kp-G~~~~~v~~a~~~~~~~~g~~~~~~~~~ghg~G--~~~~~~~~~~~~~~~~~~~~~L~~GMv~~iEp~i~~ 207 (246)
T d1chma2 131 AGLKLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIML 207 (246)
T ss_dssp HHHHHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEE
T ss_pred HHHHHhhc-ccccchhhhhhhhhHHhhccccccccccccccC--cccccccccccccccCCCceecCCCCEEEEcCeEEc
Confidence 99999998 99999999999999999998 46789999999 878876543221 11 6789999999999999997
Q ss_pred c----CccEEEEeEeeEEecCCcccccCCcceeeeecccccccccc
Q 006890 539 D----GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 539 ~----~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~ 580 (627)
+ |.+|+|+||+|+||++|+ |.||..|++++
T Consensus 208 ~~~~~g~gG~r~Ed~v~Vte~G~------------e~LT~~P~~~~ 241 (246)
T d1chma2 208 PEGLPGAGGYREHDILIVNENGA------------ENITKFPYGPE 241 (246)
T ss_dssp CTTSTTCEEEECBEEEEEETTEE------------EECCCSCCSHH
T ss_pred cCCCCcccEEEEEEEEEECCCcc------------EECCCCCCChh
Confidence 5 568999999999999997 99999999664
|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.2e-42 Score=348.12 Aligned_cols=219 Identities=21% Similarity=0.199 Sum_probs=188.1
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
||.||||+||++||+|+++++.++..+.+. +++|+||.|+++.+.++..+...
T Consensus 1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~---------------------------i~~G~te~ev~~~~~~~~~~~g~ 53 (249)
T d1o0xa_ 1 MIRIKTPSEIEKMKKAGKAVAVALREVRKV---------------------------IVPGKTAWDVETLVLEIFKKLRV 53 (249)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHGGGG---------------------------CSTTCBHHHHHHHHHHHHHHHTC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------CcCCCCHHHHHHHHHHHHHHhhh
Confidence 799999999999999999999998776554 37999999999998876643321
Q ss_pred C---C-CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHH
Q 006890 387 F---R-GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462 (627)
Q Consensus 387 ~---~-~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~ 462 (627)
. . ..+++.+++.+.+.+.+|+.++. ++.+++||++++|+|+.|+||++|+|||+++|+|+++|+++|+.+++++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~ 131 (249)
T d1o0xa_ 54 KPAFKGYGGYKYATCVSVNEEVVHGLPLK--EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVL 131 (249)
T ss_dssp EESSTTGGGCCCSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccCcccccceeecc--ccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHH
Confidence 1 1 12344556666777777877654 4889999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeeec
Q 006890 463 IALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYED 539 (627)
Q Consensus 463 ~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~~ 539 (627)
.+++++++| |+++++|+.++++++++.|+. +.|++||||| +.+||.|.+..... ++.+|+|||||++||++|.+
T Consensus 132 ~a~i~~~kp-G~~~~dv~~~~~~~~~~~g~~~~~~~~GHgiG--~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~ 208 (249)
T d1o0xa_ 132 EKAIKMIKP-GIRLGDVSHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEG 208 (249)
T ss_dssp HHHHHTCCT-TSBHHHHHHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESS
T ss_pred HHHHHHcCC-CCCHHHHHHHHHHHHHhcCCeeecCCcccccc--cCCCcCCccceeccCCCCccccCCeEEEecceeecC
Confidence 999999998 999999999999999999995 6899999999 99999887543221 57899999999999999853
Q ss_pred -----------------CccEEEEeEeeEEecCCc
Q 006890 540 -----------------GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 540 -----------------~~~GvriEd~v~V~~~g~ 557 (627)
|.+|+|+||+|+||++|+
T Consensus 209 ~~~~~~~e~~~~~~~~~g~~g~r~Ed~v~VTe~G~ 243 (249)
T d1o0xa_ 209 DWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGA 243 (249)
T ss_dssp CCCEEECTTSSCEEETTCCCEEECBEEEEECSSSE
T ss_pred CCceEEccCCcEEEeeCCcceEEeceEEEEcCCcC
Confidence 567999999999999997
|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=3.5e-41 Score=337.61 Aligned_cols=222 Identities=18% Similarity=0.182 Sum_probs=193.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC--
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH-- 386 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g-- 386 (627)
+||||+||+.||+|++++++++..+...+ ++|+||.|+++.+++...+..+
T Consensus 2 ~IKs~~Ei~~~R~A~~i~~~~~~~~~~~i---------------------------~~G~se~ei~~~~~~~~~~~~a~~ 54 (249)
T d1qxya_ 2 IVKTEEELQALKEIGYICAKVRNTMQAAT---------------------------KPGITTKELDNIAKELFEEYGAIS 54 (249)
T ss_dssp BCCSHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHTCEE
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCcHHHHHHHHHHHHHHhhhhh
Confidence 69999999999999999999998887764 7999999999998876643321
Q ss_pred --CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCC-HHHHHHHHHHHHHHH
Q 006890 387 --FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPS-AHEKACYTAVLKGHI 463 (627)
Q Consensus 387 --~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~-~e~~~~y~~v~~~~~ 463 (627)
....+|++++++|.|++.+|+.|++ ++|++||+|++|+|++|.||++|++||+++|+|+ ++++++|+.+++++.
T Consensus 55 ~~~~~~~~~~~~~~g~~~~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~ 131 (249)
T d1qxya_ 55 APIHDENFPGQTCISVNEEVAHGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFE 131 (249)
T ss_dssp HHHHHHCCSSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCC---ceecCCCceEEeeeeEECCEecccccccccCCCcchhhhHHHHHHHHHhh
Confidence 1245789999999999999999886 8999999999999999999999999999999875 577889999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCC--CC-CCCcccCCcEEeeCceeeec
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISF--KP-RNVPIHASMTATDEPGYYED 539 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~--~~-~~~~l~~Gmv~siEPg~y~~ 539 (627)
+++++++| |+++++++.++++...+.+. .+.|++|||+| +.+||.|..... .+ ++.+|+|||||++||++|.+
T Consensus 132 ~~~~~~kp-G~~~~~v~~~~~~~~~~~~~~~~~~~~gh~~G--~~~~~~p~~~~~~~~~~~~~~Le~GMV~~iEP~i~~~ 208 (249)
T d1qxya_ 132 NAIAKVKP-GTKLSNIGKAVHNTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSN 208 (249)
T ss_dssp HHHTTCCT-TCBTHHHHHHHHHHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred hhHhhccC-Cceeehhhhhhhhhhccccceeeecccccccc--cccccCCccccccccccCCccccCCceEEEeeeEecC
Confidence 99999998 99999999999999888887 57899999999 999998854221 11 67899999999999999965
Q ss_pred C-----------------ccEEEEeEeeEEecCCcccccCCcceeeeeccccc
Q 006890 540 G-----------------NFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWA 575 (627)
Q Consensus 540 ~-----------------~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~ 575 (627)
+ .+|+|+||+|+||++|+ |.||.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~g~r~EdtvlVTe~G~------------e~LT~~ 249 (249)
T d1qxya_ 209 ASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGP------------ILTTKI 249 (249)
T ss_dssp CSSCEECSSSSCEECTTCCCEEEEEEEEECCTTCC------------EETTCC
T ss_pred CcceeecCCCceEEecCCCeEEEEeeEEEEcCCcc------------EeCCCC
Confidence 3 46999999999999998 888853
|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.9e-41 Score=337.97 Aligned_cols=223 Identities=26% Similarity=0.298 Sum_probs=199.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCc
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLS 391 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~ 391 (627)
||+||+.||+|+++++.++..+.+++ ++|+||.||++.+..... ..|...++
T Consensus 1 Sp~EI~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~te~ei~~~~~~~~~-~~G~~~~~ 52 (264)
T d2v3za2 1 SPEEIAVLRRAGEITAMAHTRAMEKC---------------------------RPGMFEYHLEGEIHHEFN-RHGARYPS 52 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH-HTTCCEES
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHH-HcCCCCcc
Confidence 79999999999999999998887764 799999999999987663 45667789
Q ss_pred CCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-CCCCHHHHHHHHHHHHHHHHHHhccC
Q 006890 392 FPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 392 f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~ 470 (627)
|.+++++|+|++.+|+.+++ ++|++||++++|+|+.|+||++|++|||++ |+|+++++++|+.+.+++.+++++++
T Consensus 53 ~~~~~~~g~~~~~~h~~~~~---~~l~~gd~v~vd~g~~~~gY~~d~~Rt~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (264)
T d2v3za2 53 YNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYR 129 (264)
T ss_dssp SCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccCCCCccccccccCc---cccccccceeEEeeeccCCeeccceEEEEECCcCcHHHHHHHHhHHHHHHHHHhhhc
Confidence 99999999999999998876 899999999999999999999999999999 89999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHc--------------------CCCCcccccccccccCccccCCCcCCCCCCCCcccCCcEE
Q 006890 471 PNGTCGHTLDILARLPLWKY--------------------GLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTA 530 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~--------------------G~~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~ 530 (627)
| |+++++++.++++.+.+. +..+.|++||++| +..||.|.+... ++.+|+|||||
T Consensus 130 p-G~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~--~~~~e~p~~~~~--~~~~L~~gMv~ 204 (264)
T d2v3za2 130 P-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVGVYGQD--RSRILEPGMVL 204 (264)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCSCCCGG--GCCCCCTTCEE
T ss_pred c-ccchhhHHHHHHHHHHHhhhhhCCcccchhhhhcccccCCceeeCCCCccc--cCcccccccccc--cccccCCCcEE
Confidence 8 999999999998887653 1147899999999 999999986443 67899999999
Q ss_pred eeCceeeecC---------ccEEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccc
Q 006890 531 TDEPGYYEDG---------NFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMI 582 (627)
Q Consensus 531 siEPg~y~~~---------~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i 582 (627)
++|||+|.++ .+|+|+||+|+||++|+ |+||. .|++++.|
T Consensus 205 ~iEP~i~~~~~~~~~~~~~~~Gvr~EdtvlVTedG~------------E~LT~~~p~~~~~i 254 (264)
T d2v3za2 205 TVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGN------------ENLTASVVKKPEEI 254 (264)
T ss_dssp EECCEEEECTTCSSCGGGTTEEEECBEEEEEETTEE------------EESSTTSCCSHHHH
T ss_pred eecCCEEecCCceeeecCCeeEEEEeeEEEECCCCC------------eeCCCCCCCCHHHH
Confidence 9999999865 35999999999999997 99996 88866444
|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-40 Score=334.93 Aligned_cols=226 Identities=19% Similarity=0.249 Sum_probs=198.3
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC--
Q 006890 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH-- 386 (627)
Q Consensus 309 ~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g-- 386 (627)
+||||+||++||+|+++++.++.++++.+ ++|+||.|+++.+.+......+
T Consensus 2 ~IKs~~EI~~~R~A~~i~~~~~~~~~~~i---------------------------~~G~se~ei~~~~~~~~~~~g~~~ 54 (262)
T d2gg2a1 2 SIKTPEDIEKMRVAGRLAAEVLEMIEPYV---------------------------KPGVSTGELDRICNDYIVNEQHAV 54 (262)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHGGGC---------------------------STTCBHHHHHHHHHHHHHHTSCCE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCCHHHHHHHHHHHHHHhCCCc
Confidence 59999999999999999999998876653 7999999999988765433332
Q ss_pred ---CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHH
Q 006890 387 ---FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 387 ---~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~ 463 (627)
....+|++++.+|.+.+.+|+.|++ +++|++||+|++|+|+.|+||++|++||+++|+|+++|+++|+.+++++.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~Gd~v~id~g~~~~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~a~~ 132 (262)
T d2gg2a1 55 SACLGYHGYPKSVCISINEVVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLY 132 (262)
T ss_dssp ESSTTGGGCCSSSEEEETTEEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred cccccccCCCceeecccCceeecCCCCC--CeeccCCCEEEEEeeEEECCEEEEEEeeeecccccccchhHHHHHHHHHH
Confidence 2346788999999999999998865 37899999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeeec-
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYED- 539 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~~- 539 (627)
+++++++| |+++++|+.++++.+.+.|+. +.|.+|||+| ...|+.|.+..... .+..|+|||||++||++|..
T Consensus 133 ~~~~~ikp-G~~~~dv~~a~~~~~~~~g~~~~~~~~g~g~g--~~~~~~p~~~~~~~~~~~~~L~~gmv~~iEp~~~~~~ 209 (262)
T d2gg2a1 133 LALRMVKP-GINLREIGAAIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGK 209 (262)
T ss_dssp HHHHHCST-TCBHHHHHHHHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSC
T ss_pred HHHHhhCC-CCcHHHHHHHHHHHHHHcCCCcccccccCCCC--CCCCCCCccccccccccceEecCCeEEEeccccccCC
Confidence 99999998 999999999999999999995 5678999999 88899887643322 56889999999999999863
Q ss_pred ----------------CccEEEEeEeeEEecCCcccccCCcceeeeecccccccc
Q 006890 540 ----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQ 578 (627)
Q Consensus 540 ----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~ 578 (627)
+.+|+|+||+|+||++|+ |+||..|.+
T Consensus 210 ~~~~~~~d~~~v~~~~~~~g~r~Ed~vlVTe~G~------------e~LT~~~~~ 252 (262)
T d2gg2a1 210 KEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGC------------EILTLRKDD 252 (262)
T ss_dssp SCEEECTTSSCEEETTCCCEEECBEEEEEETTEE------------EESSCCTTC
T ss_pred CceEEcCCCCeEEeecCCcEEEEeeEEEECCCcC------------EeCCCCCcc
Confidence 447999999999999997 899976664
|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=3.2e-39 Score=316.79 Aligned_cols=207 Identities=17% Similarity=0.147 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCc
Q 006890 315 ELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPT 394 (627)
Q Consensus 315 Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~ 394 (627)
||+.||+|++++++++.++++.+ +||+||.|+++.+.....+ .|. .++|++
T Consensus 2 EIe~~r~A~~ia~~~~~~~~~~i---------------------------~pG~te~el~~~~~~~~~~-~G~-~~~~~~ 52 (218)
T d1xgsa2 2 DTEKLMKAGEIAKKVREKAIKLA---------------------------RPGMLLLELAESIEKMIME-LGG-KPAFPV 52 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHH-TTC-EESSCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHC---------------------------cCCCCHHHHHHHHHHHHHH-hhc-ccccce
Confidence 89999999999999999888764 8999999999999987744 343 468999
Q ss_pred ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 006890 395 ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 395 i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
++++|++++ |+.|...++++|++||+|++|+|+.|+||++|+||||++|++.. ++|+.+.+++.+++++++| |+
T Consensus 53 ~~~~~~~~~--~~~~~~~~~r~l~~Gd~v~iD~g~~~~gY~aD~~Rt~~~~~~~~---~~~~~~~~~~~~~~~~~kp-G~ 126 (218)
T d1xgsa2 53 NLSINEIAA--HYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGMEED---ELMEAAKEALNAAISVARA-GV 126 (218)
T ss_dssp EEEETTEEE--CCCCCTTCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTSCCC---HHHHHHHHHHHHHHHHCST-TC
T ss_pred eeccccccc--ccccccCCCeeeecCCeeEeeeccccccccccccceEeechhhh---hhhhhhhHHHHHHHHhhhc-CC
Confidence 999988775 44444444689999999999999999999999999999987654 5788999999999999997 99
Q ss_pred ccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCC-CC-CCCcccCCcEEeeCceeeecCcc--EEEEeEe
Q 006890 475 CGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISF-KP-RNVPIHASMTATDEPGYYEDGNF--GIRLENV 549 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~-~~-~~~~l~~Gmv~siEPg~y~~~~~--GvriEd~ 549 (627)
++++|+.++++.+.+.|+ .+.|.+|||||.+ ..|++|.+... .+ ++.+|+|||||+||||+|.++.+ |+|+||+
T Consensus 127 ~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG~~-~~~~~~~~~~~~~~~~~~~le~GmV~tiEP~i~~~~~~g~~~r~Ed~ 205 (218)
T d1xgsa2 127 EIKELGKAIENEIRKRGFKPIVNLSGHKIERY-KLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGARNGIVAQFEHT 205 (218)
T ss_dssp BTHHHHHHHHHHHHTTTCEECTTCCEEECBTT-BSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESSCTCCCEEECBEE
T ss_pred chhhccchHHHHHHHhCCccccccccccccCc-ccccCcccccccccCCccEecCCCEEEECCEEEeCCCCeEEEEEeeE
Confidence 999999999999999998 4789999999942 56788875321 11 67889999999999999987655 5599999
Q ss_pred eEEecCCc
Q 006890 550 LVVTDANT 557 (627)
Q Consensus 550 v~V~~~g~ 557 (627)
|+||++|+
T Consensus 206 v~Vt~~G~ 213 (218)
T d1xgsa2 206 IIVEKDSV 213 (218)
T ss_dssp EEECSSSE
T ss_pred EEEcCCce
Confidence 99999997
|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-34 Score=292.35 Aligned_cols=216 Identities=15% Similarity=0.162 Sum_probs=175.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
++.+||++||+.||+|++++++++..+...+ +||+||.|+++.++++..+...
T Consensus 48 ~~~~~~~~ei~~mR~Aa~Ia~~~~~~~~~~i---------------------------~pG~te~el~~~~e~~~~~~g~ 100 (295)
T d1b6aa2 48 ALDQASEEIWNDFREAAEAHRQVRKYVMSWI---------------------------KPGMTMIEICEKLEDCSRKLIK 100 (295)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTSBHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CCCCcHHHHHHHHHHHHHHhcc
Confidence 3445999999999999999999998877764 8999999999999876643321
Q ss_pred C----CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHH
Q 006890 387 F----RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGH 462 (627)
Q Consensus 387 ~----~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~ 462 (627)
. .+.+|++ +++.|...+||.|...++++|++||+|++|+|++|+||++|+||||++|++ +.+++.++++++
T Consensus 101 ~~~~~~~~afp~--~~~~n~~~~H~~p~~~~~~~l~~GD~v~iD~g~~~~gY~sD~trT~~~g~~---~~~~~~~~~~~~ 175 (295)
T d1b6aa2 101 ENGLNAGLAFPT--GCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPK---YDTLLKAVKDAT 175 (295)
T ss_dssp CBTTTEEEEEEE--EEEETTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSSGG---GHHHHHHHHHHH
T ss_pred ccCcccccCCcc--cccccceecccccccccchhccCCcceEEEeeeccccccccceeeeeeccc---hhHHHHHHHHHh
Confidence 1 1335544 345688889999987778999999999999999999999999999999854 456778888999
Q ss_pred HHHHhccCCCCcccchHHHHHHHHHHHcCC---------C-CcccccccccccCccccCCCcCC-CCC-CCCcccCCcEE
Q 006890 463 IALGNAVFPNGTCGHTLDILARLPLWKYGL---------D-YRHGTGHGVGSYLNVHEGPQSIS-FKP-RNVPIHASMTA 530 (627)
Q Consensus 463 ~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~---------~-~~h~~GHgvG~~l~vhE~P~~~~-~~~-~~~~l~~Gmv~ 530 (627)
.+++++++| |+++.++..+++++..+.+. . +.+.+|||+| +.+|+.|..+. ..+ +..+|+|||||
T Consensus 176 ~~a~~~~~~-g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gHgiG--~~~~~~~~~~~~~~~~~~~~Le~GmV~ 252 (295)
T d1b6aa2 176 NTGIKCAGI-DVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIG--QYRIHAGKTVPIVKGGEATRMEEGEVY 252 (295)
T ss_dssp HHHHHHCCT-TCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEB--TTBSCCSCEEESSSSCCCCBCCTTCEE
T ss_pred hhhhhcccc-cccccchHHHHHHHHHhhhhhhhhccCcccceeccccccCc--ccccccccccccccCCCCCEeCCCCEE
Confidence 999999997 99999999999998877542 1 2345799999 77787765432 111 56789999999
Q ss_pred eeCceee-------ecCccEEEEeEeeEEecCCc
Q 006890 531 TDEPGYY-------EDGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 531 siEPg~y-------~~~~~GvriEd~v~V~~~g~ 557 (627)
+|||++| .+|.+++|+||||+||++|+
T Consensus 253 tIEP~i~~g~g~v~~~g~~~~~~E~tvlVt~~G~ 286 (295)
T d1b6aa2 253 AIETFGSTGKGVVDIKGSYTAQFEHTILLRPTCK 286 (295)
T ss_dssp EEEEEEESSCSCCCSTTCCEEEEEEEEEECSSCE
T ss_pred EEeCeeeCCCeEEccCCcEEEEeceEEEECCCcC
Confidence 9999877 36778999999999999998
|
| >d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Aminopeptidase P species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.73 E-value=2.2e-18 Score=150.34 Aligned_cols=116 Identities=12% Similarity=0.212 Sum_probs=95.9
Q ss_pred HHHHHhcCCCCceEEEEcCCCCcCccCcCcccccccccccccc-CceEEEEeCCceEEEEcchhHHHHhccccCcEEEEE
Q 006890 8 LRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTG-SAGLALITMNEALLWTDGRYFLQATQELTGEWKLMR 86 (627)
Q Consensus 8 Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtg-s~g~~vvt~~~a~l~tD~RY~~qA~~~~~~~~~~~~ 86 (627)
|+++|+++| +||+||+++ .|++|||||++ +.|+++++++++.++||+||.+||++++..+. ..
T Consensus 1 i~~~m~e~~--lDa~lit~~------------~ni~YlTGf~~~~~~~lli~~~~~~li~~~~~~~~a~~~~~~~~--~~ 64 (117)
T d1pv9a1 1 LVKFMDENS--IDRVFIAKP------------VNVYYFSGTSPLGGGYIIVDGDEATLYVPELEYEMAKEESKLPV--VK 64 (117)
T ss_dssp CHHHHHHTT--CCEEEECCH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEGGGHHHHHHHCSSCE--EE
T ss_pred ChHHHHHCC--CCEEEEecc------------ccceeeeCcCCCcceEEEecCCCceEEEccchHHHHHhccCCCE--EE
Confidence 478999987 999999999 99999999998 56889999999999999999999998876433 33
Q ss_pred cCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhc
Q 006890 87 MLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKN 147 (627)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~ 147 (627)
+.+... +.+.+++.++||||+ .+|+..++.|++.++ +.+|+++ +++|+++|++
T Consensus 65 ~~~~~~----~~~~l~~~~~igiE~-~l~~~~~~~l~~~l~--~~~~~~~-~~ii~~lR~I 117 (117)
T d1pv9a1 65 FKKFDE----IYEILKNTETLGIEG-TLSYSMVENFKEKSN--VKEFKKI-DDVIKDLRII 117 (117)
T ss_dssp ESSTTH----HHHHTTTCSEEEECT-TSBHHHHHHHHHTC---CCEEEEC-HHHHHHHHTS
T ss_pred ecchhh----HHHHhccCceEeEcc-cccHHHHHHHHHhCC--CCeEEEh-HHHHHHcCcC
Confidence 433322 334566678999995 699999999999885 4799998 8999999975
|
| >d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Creatinase species: Actinobacillus sp. [TaxId: 41114]
Probab=99.66 E-value=7.3e-17 Score=147.89 Aligned_cols=129 Identities=14% Similarity=0.115 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCc----eEEEEeCCceEEEEcchhHHHHhc
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA----GLALITMNEALLWTDGRYFLQATQ 76 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~----g~~vvt~~~a~l~tD~RY~~qA~~ 76 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||+++. .+++++.++.+++++.++..+|+.
T Consensus 24 ~~~R~~klr~~M~e~~--iDallit~~------------~ni~YlTGf~~~~~~~~~~l~v~~~~~~~~~~~~~~~~a~~ 89 (156)
T d1kp0a1 24 MTRRZBRLRAWMAKSB--IDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMPWR 89 (156)
T ss_dssp HHHHHHHHHHHHHHHT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHH
T ss_pred HHHHHHHHHHHHHHCC--CCEEEEcCc------------ccCeeecCCCcCccceeEEEEcCCCCcEEEechhhhhhhhc
Confidence 4689999999999998 999999999 8999999999863 466778888999999999999988
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWK 146 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~ 146 (627)
+...+...+.......+.+.+.+.....++||+|.+.+|+..++.|++.++ +.+|+++ +.+|.++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ig~E~~~~~~~~~~~L~~~l~--~~~~vD~-s~~i~~~RM 156 (156)
T d1kp0a1 90 RSFGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALP--GTEFVDV-GZPVMWZRV 156 (156)
T ss_dssp HCSSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHST--TCEEEEC-HHHHHHHHT
T ss_pred cccccceeeecCcchHHHHHHHHhccccceeeeecceEcHHHHHHHHHhCC--CCEEEEh-hHHHHHhhC
Confidence 766444444332234455667777777789999999999999999999984 4799999 889999885
|
| >d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Creatinase species: Pseudomonas putida [TaxId: 303]
Probab=99.64 E-value=2e-16 Score=144.72 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=106.3
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC----ceEEEEeCCceEEEEcchhHHHHhc
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS----AGLALITMNEALLWTDGRYFLQATQ 76 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs----~g~~vvt~~~a~l~tD~RY~~qA~~ 76 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||+++ .+.++|+.++.+++++.+|..++..
T Consensus 23 ~~~Rl~klr~~m~~~g--iDalli~~~------------~ni~YlTGf~~~~~~r~~~l~i~~~~~~~~~~~~~~~~~~~ 88 (155)
T d1chma1 23 YANRQARLRAHLAAEN--IDAAIFTSY------------HNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPWR 88 (155)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHH
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEecc------------ccceeecCccccCccCceEEEecCCCceEEecchHHHHHHH
Confidence 4679999999999998 999999999 899999999865 4688999999999999999999988
Q ss_pred cccC-cEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 77 ELTG-EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 77 ~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
.... .+..+.....+.+.+.+.+.....++||||.+.+|+..++.|++.++ +.+++++ +.+|.++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~IGie~~~~~~~~~~~L~~~lp--~~~~vd~-s~~i~~lR 155 (155)
T d1chma1 89 RTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYP--DAELVDV-AAACMRMR 155 (155)
T ss_dssp HCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCT--TCEEEEC-HHHHHHHH
T ss_pred hccccccccccCCcchHHHHHHHHhcccCceEEEeccEEcHHHHHHHHHhCC--CCEEEEh-HHHHHhhC
Confidence 7654 23333233334456667777777789999999999999999999985 4799999 78888887
|
| >d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Creatinase species: Pseudomonas putida [TaxId: 303]
Probab=99.10 E-value=4.3e-11 Score=108.60 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=97.2
Q ss_pred ccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhh
Q 006890 161 IEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l 240 (627)
..|+..++++|++++|+.|+++|+|+++++++.|++||||+.+.. ...| .+++|+.++..+++...+........
T Consensus 16 ~~fs~~E~~~Rl~klr~~m~~~giDalli~~~~ni~YlTGf~~~~-~~r~---~~l~i~~~~~~~~~~~~~~~~~~~~~- 90 (155)
T d1chma1 16 STFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCS-FGRP---YALVVTEDDVISISANIDGGQPWRRT- 90 (155)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCCC-TTCC---CEEEECSSCEEEEEEGGGTTHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccccceeecCccccC-ccCc---eEEEecCCCceEEecchHHHHHHHhc-
Confidence 357788999999999999999999999999999999999997643 2333 45788888888888877665544432
Q ss_pred hhCCeEEeeCCchh--HHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhh
Q 006890 241 KESGVEVRDYDAVS--SDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAK 308 (627)
Q Consensus 241 ~~~~v~v~~y~~~~--~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r 308 (627)
....+..|.+.. .....+.. .. ...++||+|.+.+++..+..| ++.+++|++..+.++|
T Consensus 91 --~~~~~~~~~~~~~~~~~~~l~~-~~------~~~~~IGie~~~~~~~~~~~L~~~lp~~~~vd~s~~i~~lR 155 (155)
T d1chma1 91 --VGTDNIVYTDWQRDNYFAAIQQ-AL------PKARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMR 155 (155)
T ss_dssp --CSSEEEEECTTSTTHHHHHHHH-HC------SCCSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred --cccccccccCCcchHHHHHHHH-hc------ccCceEEEeccEEcHHHHHHHHHhCCCCEEEEhHHHHHhhC
Confidence 344555554332 22332322 11 246799999888898777654 5579999998888876
|
| >d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Creatinase species: Actinobacillus sp. [TaxId: 41114]
Probab=99.07 E-value=8.6e-11 Score=106.60 Aligned_cols=135 Identities=9% Similarity=0.048 Sum_probs=94.1
Q ss_pred ccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhh
Q 006890 161 IEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFL 240 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l 240 (627)
..|+-.++++|++++|+.|+++|+|++++++++|+.|||||.+... ..| .+++++.+.+.++++......+...
T Consensus 17 ~pFs~~E~~~R~~klr~~M~e~~iDallit~~~ni~YlTGf~~~~~-~~~---~~l~v~~~~~~~~~~~~~~~~a~~~-- 90 (156)
T d1kp0a1 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGMPWRR-- 90 (156)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEcCcccCeeecCCCcCcc-cee---EEEEcCCCCcEEEechhhhhhhhcc--
Confidence 3477889999999999999999999999999999999999986431 223 3456677788888877665554332
Q ss_pred hhCCeEEeeC-CchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhh
Q 006890 241 KESGVEVRDY-DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKA 309 (627)
Q Consensus 241 ~~~~v~v~~y-~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~ 309 (627)
...+...| ....+.+........ ..+++||++.+.+|+..++.| +..+++|++.+|.++|+
T Consensus 91 --~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~ig~E~~~~~~~~~~~L~~~l~~~~~vD~s~~i~~~RM 156 (156)
T d1kp0a1 91 --SFGBNIVYTDWKRDNFYSAVKKLV------KGAKZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRV 156 (156)
T ss_dssp --CSSEEEEECSSSTTHHHHHHHHHH------TTCSEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHT
T ss_pred --ccccceeeecCcchHHHHHHHHhc------cccceeeeecceEcHHHHHHHHHhCCCCEEEEhhHHHHHhhC
Confidence 12222222 222122211211111 246799999999998877665 56799999999999885
|
| >d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Aminopeptidase P species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.06 E-value=3.6e-11 Score=103.73 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=88.9
Q ss_pred HHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEeeCCchh
Q 006890 175 LREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVS 254 (627)
Q Consensus 175 lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~y~~~~ 254 (627)
|++.|+++|+|+++++++.|+.||||+.+.. .++++++.+++.++++.++..++.++ .++++..|.+..
T Consensus 1 i~~~m~e~~lDa~lit~~~ni~YlTGf~~~~-------~~~lli~~~~~~li~~~~~~~~a~~~----~~~~~~~~~~~~ 69 (117)
T d1pv9a1 1 LVKFMDENSIDRVFIAKPVNVYYFSGTSPLG-------GGYIIVDGDEATLYVPELEYEMAKEE----SKLPVVKFKKFD 69 (117)
T ss_dssp CHHHHHHTTCCEEEECCHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEGGGHHHHHHH----CSSCEEEESSTT
T ss_pred ChHHHHHCCCCEEEEeccccceeeeCcCCCc-------ceEEEecCCCceEEEccchHHHHHhc----cCCCEEEecchh
Confidence 4688999999999999999999999987532 26888899999999999876654332 356788888877
Q ss_pred HHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhhc
Q 006890 255 SDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAI 310 (627)
Q Consensus 255 ~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~i 310 (627)
+..+.+. +.++||+|. .+++..++.| +..+++++++.+..+|+|
T Consensus 70 ~~~~~l~-----------~~~~igiE~-~l~~~~~~~l~~~l~~~~~~~~~~ii~~lR~I 117 (117)
T d1pv9a1 70 EIYEILK-----------NTETLGIEG-TLSYSMVENFKEKSNVKEFKKIDDVIKDLRII 117 (117)
T ss_dssp HHHHHTT-----------TCSEEEECT-TSBHHHHHHHHHTC-CCEEEECHHHHHHHHTS
T ss_pred hHHHHhc-----------cCceEeEcc-cccHHHHHHHHHhCCCCeEEEhHHHHHHcCcC
Confidence 6665442 357899994 6899887766 446899999999999986
|
| >d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Aminopeptidase P species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=0.041 Score=48.82 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCc----CccCcCccccccccccccccCceEEEEeCC-----ceEEEEcchhHH
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYH----QSEYVSARDKRREFVSGFTGSAGLALITMN-----EALLWTDGRYFL 72 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h----~sey~~~~~~~~~ylTGFtgs~g~~vvt~~-----~a~l~tD~RY~~ 72 (627)
.+|.++|.+.|.+. ..+||++.+.. -.+|.=-.+.+.+|||||.-..+++|+.++ +.+||++.+-..
T Consensus 9 ~~RR~~l~~~l~~~----sv~il~~~~~~~r~~D~~y~FrQ~s~F~YLTG~~ep~~vlvl~~~~~~~~~~~Lf~~~~d~~ 84 (176)
T d2v3za1 9 QRRRQALVEQMQPG----SAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLT 84 (176)
T ss_dssp HHHHHHHHHHSCSS----EEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHH
T ss_pred HHHHHHHHHhCCCC----CEEEEECCCeeeccCCCCCCccccCccceecccCCCCceEEEEecCCCCcEEEEEEcCCCcc
Confidence 46778888888653 46677766542 245655667889999999988887777542 257888664432
Q ss_pred H------------HhccccCcEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCH--HHHHHHHHHHHh-------cCC
Q 006890 73 Q------------ATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSI--DTAQRWERAFAK-------KQQ 131 (627)
Q Consensus 73 q------------A~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~--~~~~~l~~~l~~-------~~~ 131 (627)
. |++...-+ ++... ..+...|.+.+.....|-++...-+. .....+.+.+.. ...
T Consensus 85 ~e~W~G~~~~~e~a~~~~gid-~~~~~---~~~~~~L~~ll~~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 160 (176)
T d2v3za1 85 AEIWFGRRLGQDAAPEKLGVD-RALAF---SEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPA 160 (176)
T ss_dssp HHHHHCCCCHHHHHHHHHTCS-EEEEG---GGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCCCCS
T ss_pred cceeCCccccchhhhhhcccc-eEEeh---HHHhhhHHHHHhcCCeEEecccCcHHHHHHHHHHHHHHHHhhhccCCCcc
Confidence 2 22222111 23322 12455666666666677665432221 111222222211 124
Q ss_pred eEEecCcChhhHhhhcC
Q 006890 132 KLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 132 ~l~~~~~~lid~lr~~k 148 (627)
.+.++ ..++++||.+|
T Consensus 161 ~i~~l-~~il~elRlIK 176 (176)
T d2v3za1 161 TMIDW-RPVVHEMRLFK 176 (176)
T ss_dssp EEECC-HHHHHHHHHSC
T ss_pred cccCh-HHHHHHhcCCC
Confidence 56666 67889999877
|
| >d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Creatinase/prolidase N-terminal domain family: Creatinase/prolidase N-terminal domain domain: Aminopeptidase P species: Escherichia coli [TaxId: 562]
Probab=94.01 E-value=0.041 Score=48.80 Aligned_cols=128 Identities=13% Similarity=0.263 Sum_probs=76.6
Q ss_pred cCCcHHHHHHHHHHHhhccCCcEEEEecCC----------------ccceEEccccCCCCCCcceeEEEEEE--CC---c
Q 006890 164 AGSSVVEKLKELREKLTNEKARGIIITTLD----------------EVAWLYNIRGTDVPYCPVVHAFAIVT--TN---A 222 (627)
Q Consensus 164 ~G~~~~~ri~~lr~~m~~~~~d~lll~~~d----------------ni~wLtg~rg~d~~~~P~~~a~~lv~--~~---~ 222 (627)
+-+++++|.++|.+.|.+. ..+|+.+.. |+.||||+.-.+ +.+++. .+ +
T Consensus 4 ~~~ey~~RR~~l~~~l~~~--sv~il~~~~~~~r~~D~~y~FrQ~s~F~YLTG~~ep~--------~vlvl~~~~~~~~~ 73 (176)
T d2v3za1 4 SRQEFQRRRQALVEQMQPG--SAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNH 73 (176)
T ss_dssp CHHHHHHHHHHHHHHSCSS--EEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSS--------CEEEEEECSSSCEE
T ss_pred CHHHHHHHHHHHHHhCCCC--CEEEEECCCeeeccCCCCCCccccCccceecccCCCC--------ceEEEEecCCCCcE
Confidence 3456889999999998653 244554433 578899886544 556663 22 2
Q ss_pred eEEEEeCCCCCHHHH--------HhhhhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHH------
Q 006890 223 AFLYVDKRKVSSEVI--------SFLKESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYA------ 287 (627)
Q Consensus 223 ~~L~v~~~~~~~~~~--------~~l~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~------ 287 (627)
.+||+.+.....++- ......|+ ++.+.+++.+.+..+.. +...|.++.+.-+..
T Consensus 74 ~~Lf~~~~d~~~e~W~G~~~~~e~a~~~~gid~~~~~~~~~~~L~~ll~----------~~~~iy~~~~~~~~~~~~~~~ 143 (176)
T d2v3za1 74 SVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN----------GLDVVYHAQGEYAYADVIVNS 143 (176)
T ss_dssp EEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHT----------TCSEEECCTTSCHHHHHHHHH
T ss_pred EEEEEcCCCcccceeCCccccchhhhhhcccceEEehHHHhhhHHHHHh----------cCCeEEecccCcHHHHHHHHH
Confidence 579998876443321 11222355 66777777777766643 345677766542211
Q ss_pred HHhhc---------CCCeEEecCCccchhhhcC
Q 006890 288 LYSKL---------NSDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 288 ~~~~l---------~~~~~~~~~~~i~~~r~iK 311 (627)
....+ +...+.+..+.+..||.||
T Consensus 144 ~~~~~~~~~r~~~~~~~~i~~l~~il~elRlIK 176 (176)
T d2v3za1 144 ALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFK 176 (176)
T ss_dssp HHHHHHTCGGGTCCCCSEEECCHHHHHHHHHSC
T ss_pred HHHHHHHhhhccCCCcccccChHHHHHHhcCCC
Confidence 11111 1135667777889999998
|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.89 E-value=0.17 Score=46.00 Aligned_cols=96 Identities=13% Similarity=-0.024 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCCCCCCCcccCCcE
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMT 529 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv 529 (627)
..|++...+-+++.++++.++| |++-.+|....+..+.+.|......+.=+.|.. ..|-.|.. +++.+|++|.+
T Consensus 5 ~~r~A~~ia~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~----~~~r~l~~Gd~ 78 (218)
T d1xgsa2 5 KLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNLSINEI-AAHYTPYK----GDTTVLKEGDY 78 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEEEETTE-EECCCCCT----TCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHhhcccccceeeccccc-cccccccc----CCCeeeecCCe
Confidence 4688889999999999999997 999999999999999999863222222122210 12222221 15688999999
Q ss_pred EeeCceeeecCccEEEEeEeeEE
Q 006890 530 ATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 530 ~siEPg~y~~~~~GvriEd~v~V 552 (627)
+.++.|....| |-.-+.-|+.+
T Consensus 79 v~iD~g~~~~g-Y~aD~~Rt~~~ 100 (218)
T d1xgsa2 79 LKIDVGVHIDG-FIADTAVTVRV 100 (218)
T ss_dssp EEEEEEEEETT-EEEEEEEEEET
T ss_pred eEeeecccccc-ccccccceEee
Confidence 99998876543 55556666543
|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.16 E-value=0.25 Score=46.23 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCcc---cccccccccCccccCCCcCCCCCCCCcccCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYRH---GTGHGVGSYLNVHEGPQSISFKPRNVPIHAS 527 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h---~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~G 527 (627)
.|++...+.+++.++.+.++| |++-.+|++.+...+.+.|-.++. -.+.|... -.|.. .+.+.+|++|
T Consensus 8 ~r~A~~i~~~~~~~~~~~i~~-G~te~ei~~~~~~~~~~~G~~~~~~~~~~~~g~~~-----~~~h~---~~~~~~l~~g 78 (264)
T d2v3za2 8 LRRAGEITAMAHTRAMEKCRP-GMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENG-----CILHY---TENECEMRDG 78 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGG-----GSTTC---CCCCSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCccccccccCCCCc-----ccccc---ccCccccccc
Confidence 466677777888899999997 999999999999999999875432 22222210 11211 1267889999
Q ss_pred cEEeeCceeeecCccEEEEeEeeEE
Q 006890 528 MTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~v~V 552 (627)
.++.++.|....| |-.-+..|+.|
T Consensus 79 d~v~vd~g~~~~g-Y~~d~~Rt~~v 102 (264)
T d2v3za2 79 DLVLIDAGCEYKG-YAGDITRTFPV 102 (264)
T ss_dssp CEEEEEECEEETT-EECCEEEEEET
T ss_pred cceeEEeeeccCC-eeccceEEEEE
Confidence 9999999877654 33345555544
|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.09 E-value=0.13 Score=49.26 Aligned_cols=85 Identities=13% Similarity=-0.010 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--CcccccccccccC---ccccCCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYL---NVHEGPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l---~vhE~P~~~~~~~~~~~l~ 525 (627)
+|++-..+.+++.++.+.++| |++-.+|.+.+...+.+.|-. +..+.+..++... ..|-.|.. .++.+|+
T Consensus 60 mR~Aa~Ia~~~~~~~~~~i~p-G~te~el~~~~e~~~~~~g~~~~~~~~~afp~~~~~n~~~~H~~p~~----~~~~~l~ 134 (295)
T d1b6aa2 60 FREAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNA----GDTTVLQ 134 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEETTEEECCCCCT----TCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHhccccCcccccCCcccccccceeccccccc----ccchhcc
Confidence 455666777778888899997 999999999888888887652 2222332222001 12333321 1578899
Q ss_pred CCcEEeeCceeeecC
Q 006890 526 ASMTATDEPGYYEDG 540 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~ 540 (627)
+|.++.++-|....|
T Consensus 135 ~GD~v~iD~g~~~~g 149 (295)
T d1b6aa2 135 YDDICKIDFGTHISG 149 (295)
T ss_dssp TTCCEEEEEEEEETT
T ss_pred CCcceEEEeeecccc
Confidence 999999999987665
|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Staphylococcus aureus [TaxId: 1280]
Probab=87.87 E-value=0.62 Score=42.87 Aligned_cols=93 Identities=19% Similarity=0.120 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--------CcccccccccccCccccCCCcCCCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--------YRHGTGHGVGSYLNVHEGPQSISFKPRNV 522 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--------~~h~~GHgvG~~l~vhE~P~~~~~~~~~~ 522 (627)
.|++...+-+++.++...++| |++-.+|...+...+.+.|-. |...++.|.. . ......+++.
T Consensus 12 ~R~A~~i~~~~~~~~~~~i~~-G~se~ei~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~------~--~~~h~~~~~~ 82 (249)
T d1qxya_ 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVN------E--EVAHGIPSKR 82 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEET------T--EEECCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHhhhhhccccccccccccccccc------c--cccccccCCc
Confidence 355666667788888889997 999999999888888887641 2222222222 1 1111122678
Q ss_pred cccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 523 PIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 523 ~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+|++|.++.++.|....| |..-+.-|+.+.
T Consensus 83 ~l~~Gd~v~id~g~~~~g-Y~~d~~Rt~~~G 112 (249)
T d1qxya_ 83 VIREGDLVNIDVSALKNG-YYADTGISFVVG 112 (249)
T ss_dssp BCCTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred eecCCCceEEeeeeEECC-EecccccccccC
Confidence 899999999998876554 555666677663
|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Escherichia coli [TaxId: 562]
Probab=84.78 E-value=2.5 Score=38.76 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc-cccccc--ccccCccccCCCcCCCCC-CCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR-HGTGHG--VGSYLNVHEGPQSISFKP-RNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~-h~~GHg--vG~~l~vhE~P~~~~~~~-~~~~l~~ 526 (627)
.|++...+-+++.++.+.++| |++-.||.+.+++.+.+.|.... ....+| -......+.. .....+ ++.+|++
T Consensus 12 ~R~A~~i~~~~~~~~~~~i~~-G~se~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 88 (262)
T d2gg2a1 12 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEV--VCHGIPDDAKLLKD 88 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTE--EECCCCCTTCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHhCCCccccccccCCCceeecccCce--eecCCCCCCeeccC
Confidence 455566667778888899997 99999999988877766654211 111111 1100111111 001111 4468999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.++-|.-..| |-.-+..|+++
T Consensus 89 Gd~v~id~g~~~~g-Y~~d~~Rt~~~ 113 (262)
T d2gg2a1 89 GDIVNIDVTVIKDG-FHGDTSKMFIV 113 (262)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCEEEEEeeEEECC-EEEEEEeeeec
Confidence 99999998765543 44556666554
|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Thermotoga maritima [TaxId: 2336]
Probab=83.78 E-value=2.5 Score=38.39 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC-c---ccccccccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY-R---HGTGHGVGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~-~---h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++...+.+++.++.+.++| |++-.+|+..+.+.+.+.|... . ++....+. ...+..+.-... +.+.++++
T Consensus 13 mr~A~~ia~~~~~~~~~~i~~-G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~ 88 (249)
T d1o0xa_ 13 MKKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEVVHGLP-LKEKVFKE 88 (249)
T ss_dssp HHHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBCSCCCC-CTTCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHhhhhhhcccccccccccc--ccCcccccceee-cccccccc
Confidence 455566667778888888997 9999999999999999988621 1 11111111 122222211111 15678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.++.|....| |-.=+.-|+++
T Consensus 89 gd~v~id~g~~~~g-y~~D~~RT~~~ 113 (249)
T d1o0xa_ 89 GDIVSVDVGAVYQG-LYGDAAVTYIV 113 (249)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred ccceeeecceeecc-eecccccceee
Confidence 99999998876554 33334444444
|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Aminopeptidase P, C-terminal domain species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.31 E-value=1.9 Score=38.53 Aligned_cols=94 Identities=12% Similarity=0.040 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc-ccccccccccCccccCCCcCCCCCCCCcccCCcE
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR-HGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMT 529 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~-h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv 529 (627)
.|++...+-+++.++.+.++| |++-.+|....+..+.+.|.... ..+--+.| -+ ...|. ..+++.++++|.+
T Consensus 9 mr~a~~i~~~~~~~~~~~i~~-G~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~g--~~-~~~~h---~~~~~~~i~~gd~ 81 (221)
T d1pv9a2 9 IEKACEIADKAVMAAIEEITE-GKREREVAAKVEYLMKMNGAEKPAFDTIIASG--HR-SALPH---GVASDKRIERGDL 81 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCSEESSCCEEEEG--GG-GGSTT---CBCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHhccccccccccccccc--cc-ccccc---cccccccccccce
Confidence 455666667778888899997 99999999999999998886321 11111112 11 11111 1125678999999
Q ss_pred EeeCceeeecCccEEEEeEeeEE
Q 006890 530 ATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 530 ~siEPg~y~~~~~GvriEd~v~V 552 (627)
+.++.|.-..| |-.-+..|++|
T Consensus 82 v~id~~~~~~g-y~~d~~Rt~~v 103 (221)
T d1pv9a2 82 VVIDLGALYNH-YNSDITRTIVV 103 (221)
T ss_dssp EEEEECEEETT-EECCEEEEEES
T ss_pred EEEecccccCc-cccCcceeeec
Confidence 99998765433 44445666666
|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Creatinase, catalytic (C-terminal) domain species: Pseudomonas putida [TaxId: 303]
Probab=80.43 E-value=1.3 Score=40.42 Aligned_cols=92 Identities=12% Similarity=-0.012 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC------Ccc---cccccccccCccccCCCcCCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD------YRH---GTGHGVGSYLNVHEGPQSISFKPRN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~------~~h---~~GHgvG~~l~vhE~P~~~~~~~~~ 521 (627)
.|++...+.+++.++.+.++| |++-.+|...+...+.+.|-. +.. ...+|.- ...|. ..+++
T Consensus 11 iR~a~~i~~~~~~~~~~~i~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~-----~~~~h---~~~~~ 81 (246)
T d1chma2 11 IRHGARIADIGGAAVVEALGD-QVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGIN-----TDGAH---NPVTT 81 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEGGG-----GGSTT---CCEES
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhcCcccCccccccccccccccCc-----ccccc---ccCCC
Confidence 466777778888899999997 999999998888887776531 110 0111111 01111 11257
Q ss_pred CcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 522 VPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
.++++|.++.++.|....| |-.-+.-|++|
T Consensus 82 ~~~~~gd~v~~d~g~~~~g-Y~~d~~Rt~~~ 111 (246)
T d1chma2 82 RKVNKGDILSLNCFPMIAG-YYTALERTLFL 111 (246)
T ss_dssp CBCCTTCEEEEEEECEETT-EECCEEEEEEE
T ss_pred ccccCCCEEEEeecccccc-cccceeecccc
Confidence 7899999999998776544 55556677777
|