Citrus Sinensis ID: 006961

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620---
MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL
ccEEEEccccccccccccccHHHHHHHccccccccccccccEEEEccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEccHHHHHHHHHcccccEEcccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHcHHcccccccHHHccccHHHHHHHHHcHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
cEEEEEEccccccccEcccccccHHccccccccccHcccccEEEEEEccccccccccHHHHHHHccccccccccEEEcccccccccHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEccHHHHHHHHcccccEEccccccccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHccccEEEEEEccccccccccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEccccHHHHHHHHHHHccccEEEEcccHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHccHHHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccEEEccccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHcccccccHHHHHcHHHHccccccccccccEEcccEEccccHHHHHHHHHHHHHHHHccccccccEEEcccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccc
mlffflfnpsdpqsfhfWDIALLAIYLLQMFSfnanmqgttvrvefgdstttadpadthsisrsfphtygqpLAHFLRAtakvpdaqiitehpairvgivfcgrqspgghnvvWGLYDAlklhnpkstllgflggseglfaQKTLEVTKEILSTYknqggydmlgrtkDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFaeakcptkvvgvpvtlngdlknqfvetNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALEctlqshpnmVILGEEVAASKLTLFDLTKQICDAVQARAEqdknhgvillpeglieSIPEVYALLKEIHSLLRqgvpvdnissqlsPWASALFEflppfikkqlllqpesddsaqLSQIETEKLLAHLVEVEMNKrlkegtykgkkfnaichffgyqargslpskfdcdyaYVLGHICYHILAAGLNGYMATVtnlknpankwrcgaapitsmmtvkrwsqnpgassigrpainpatvDMRGKAYELLRQNATRFLLddlyrnpgpvqfdgpgadaKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMsasggqttl
MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILStyknqggydmLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRlkegtykgkkFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSqnpgassigrpainpaTVDMRGKAYELLRQNATRFLLDDLYRNPGpvqfdgpgadAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSamsasggqttl
MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTllgflggseglfAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL
*LFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFG*****************FPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLL**************TEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRW*************INPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEV*************
MLFFFL*NPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFL***********ITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTK******EQ*NAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMT****************AINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMS********
MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQ********LSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLS***********
MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMS********
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MLFFFLFNPSDPQSFHFWDIALLAIYLLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query623 2.2.26 [Sep-21-2011]
Q41140617 Pyrophosphate--fructose 6 N/A no 0.932 0.941 0.889 0.0
Q9C9K3617 Pyrophosphate--fructose 6 yes no 0.922 0.931 0.850 0.0
P21342616 Pyrophosphate--fructose 6 N/A no 0.922 0.933 0.857 0.0
Q9SYP2614 Pyrophosphate--fructose 6 no no 0.937 0.951 0.836 0.0
Q8W4M5566 Pyrophosphate--fructose 6 no no 0.825 0.908 0.413 1e-116
F4JGR5569 Pyrophosphate--fructose 6 no no 0.810 0.887 0.413 1e-115
Q41141552 Pyrophosphate--fructose 6 N/A no 0.804 0.907 0.419 1e-114
P21343552 Pyrophosphate--fructose 6 N/A no 0.810 0.914 0.414 1e-113
Q9C5J7485 6-phosphofructokinase 7 O no no 0.420 0.540 0.250 2e-15
Q94AA4489 6-phosphofructokinase 3 O no no 0.341 0.435 0.255 3e-13
>sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1 Back     alignment and function desciption
 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/581 (88%), Positives = 551/581 (94%)

Query: 37  MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
           +QGTTVRVE GD TT    A  H+ISRSFPHTYGQPLAHFLRATAKV DA II+EHPA+R
Sbjct: 29  LQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRATAKVADAHIISEHPAMR 88

Query: 97  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 156
           VG+VFCGRQSPGGHNVVWGL++ALK+HNP STLLGFLGGSEGLFAQKTLEVT +ILSTYK
Sbjct: 89  VGVVFCGRQSPGGHNVVWGLHNALKIHNPNSTLLGFLGGSEGLFAQKTLEVTDDILSTYK 148

Query: 157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
           NQGGYD+LGRTKDQIRTTEQV+AALT CKNL LDGLVIIGGVTSNTDAA LAETFAEAKC
Sbjct: 149 NQGGYDLLGRTKDQIRTTEQVHAALTTCKNLKLDGLVIIGGVTSNTDAAQLAETFAEAKC 208

Query: 217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
           PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR+
Sbjct: 209 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRK 268

Query: 277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
           ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQ+CDAVQARAEQDK HGVILLPEGL
Sbjct: 269 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQVCDAVQARAEQDKYHGVILLPEGL 328

Query: 337 IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA 396
           IESIPEVYALLKEIH LLRQGV  +NISSQLSPWASALFEFLPPFIKKQLLL PESDDSA
Sbjct: 329 IESIPEVYALLKEIHGLLRQGVSPNNISSQLSPWASALFEFLPPFIKKQLLLYPESDDSA 388

Query: 397 QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 456
           QLSQIETEKLLAHLVE EMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL
Sbjct: 389 QLSQIETEKLLAHLVEAEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 448

Query: 457 GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN 516
           GHICYH+LAAGLNGYMAT TNLKNP NKWRCGAAPI +MMTVKRW+QNPGA+SIG+PAI+
Sbjct: 449 GHICYHVLAAGLNGYMATATNLKNPVNKWRCGAAPIAAMMTVKRWAQNPGATSIGKPAIH 508

Query: 517 PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE 576
           PA VD++GKAYELLR NA +FL+DDLYRNPGP+QF+GPGADAK +TLCVED+DYMGRIK+
Sbjct: 509 PAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFEGPGADAKPITLCVEDQDYMGRIKK 568

Query: 577 LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSAS 617
           LQ+YLD+VRTIVKPGCSQEVLKAALSVMASVT+VL  MS++
Sbjct: 569 LQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSST 609
The alpha subunit may be involved in the regulation of PFP by Fru-2,6-P.
Ricinus communis (taxid: 3988)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 9EC: 0
>sp|Q9C9K3|PFPA2_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana GN=PFP-ALPHA2 PE=2 SV=1 Back     alignment and function description
>sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function description
>sp|Q9SYP2|PFPA1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana GN=PFP-ALPHA1 PE=2 SV=1 Back     alignment and function description
>sp|Q8W4M5|PFPB1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 OS=Arabidopsis thaliana GN=PFP-BETA1 PE=2 SV=1 Back     alignment and function description
>sp|F4JGR5|PFPB2_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2 OS=Arabidopsis thaliana GN=PFP-BETA2 PE=2 SV=1 Back     alignment and function description
>sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1 Back     alignment and function description
>sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2 Back     alignment and function description
>sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 Back     alignment and function description
>sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
162955859615 pyrophosphate-dependent phosphofructokin 0.942 0.954 0.998 0.0
3790102615 pyrophosphate-dependent phosphofructokin 0.942 0.954 0.991 0.0
224086120617 predicted protein [Populus trichocarpa] 0.942 0.951 0.893 0.0
118484164617 unknown [Populus trichocarpa] 0.942 0.951 0.891 0.0
255539346617 phosphofructokinase, putative [Ricinus c 0.932 0.941 0.893 0.0
2499488617 RecName: Full=Pyrophosphate--fructose 6- 0.932 0.941 0.889 0.0
225457674616 PREDICTED: pyrophosphate--fructose 6-pho 0.942 0.952 0.879 0.0
384255900617 phosphofructokinase alpha subunit [Eriob 0.942 0.951 0.872 0.0
224061821617 predicted protein [Populus trichocarpa] 0.922 0.931 0.892 0.0
356521092617 PREDICTED: pyrophosphate--fructose 6-pho 0.939 0.948 0.880 0.0
>gi|162955859|gb|ABY25305.1| pyrophosphate-dependent phosphofructokinase alpha subunit [Citrus sinensis x Citrus trifoliata] Back     alignment and taxonomy information
 Score = 1219 bits (3155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/587 (99%), Positives = 587/587 (100%)

Query: 37  MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
           +QGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR
Sbjct: 29  LQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 88

Query: 97  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 156
           VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK
Sbjct: 89  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 148

Query: 157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
           NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC
Sbjct: 149 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 208

Query: 217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
           PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR
Sbjct: 209 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 268

Query: 277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
           ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL
Sbjct: 269 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 328

Query: 337 IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA 396
           IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA
Sbjct: 329 IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA 388

Query: 397 QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 456
           QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL
Sbjct: 389 QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 448

Query: 457 GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN 516
           GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN
Sbjct: 449 GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN 508

Query: 517 PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE 576
           PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE
Sbjct: 509 PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE 568

Query: 577 LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL 623
           LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL
Sbjct: 569 LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASGGQTTL 615

Source: Citrus sinensis x Citrus trifoliata

Species: Citrus sinensis x Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|3790102|gb|AAC67587.1| pyrophosphate-dependent phosphofructokinase alpha subunit [Citrus x paradisi] Back     alignment and taxonomy information
>gi|224086120|ref|XP_002307823.1| predicted protein [Populus trichocarpa] gi|222857272|gb|EEE94819.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118484164|gb|ABK93964.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255539346|ref|XP_002510738.1| phosphofructokinase, putative [Ricinus communis] gi|223551439|gb|EEF52925.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|2499488|sp|Q41140.1|PFPA_RICCO RecName: Full=Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; Short=PFP; AltName: Full=6-phosphofructokinase, pyrophosphate dependent; AltName: Full=PPi-PFK; AltName: Full=Pyrophosphate-dependent 6-phosphofructose-1-kinase gi|483547|emb|CAA83682.1| pyrophosphate-dependent phosphofructokinase alpha subunit [Ricinus communis] Back     alignment and taxonomy information
>gi|225457674|ref|XP_002276269.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|384255900|gb|ADZ96380.2| phosphofructokinase alpha subunit [Eriobotrya japonica] Back     alignment and taxonomy information
>gi|224061821|ref|XP_002300615.1| predicted protein [Populus trichocarpa] gi|222842341|gb|EEE79888.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356521092|ref|XP_003529192.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
TAIR|locus:2011671617 AT1G76550 [Arabidopsis thalian 0.932 0.941 0.824 2.4e-266
TAIR|locus:2037385614 AT1G20950 [Arabidopsis thalian 0.937 0.951 0.815 2.8e-263
TAIR|locus:2008920566 AT1G12000 [Arabidopsis thalian 0.825 0.908 0.407 6.9e-102
TAIR|locus:2136652569 MEE51 "maternal effect embryo 0.810 0.887 0.403 1e-100
TIGR_CMR|CHY_1143321 CHY_1143 "6-phosphofructokinas 0.354 0.688 0.246 3e-09
TAIR|locus:2165046485 PFK7 "phosphofructokinase 7" [ 0.407 0.523 0.234 6.2e-09
TAIR|locus:2118249473 PFK1 "phosphofructokinase 1" [ 0.327 0.431 0.247 2.4e-08
UNIPROTKB|O34529319 pfkA "6-phosphofructokinase" [ 0.304 0.595 0.251 4.3e-08
TAIR|locus:2136849489 PFK3 "phosphofructokinase 3" [ 0.340 0.433 0.234 5.6e-08
TIGR_CMR|BA_4844319 BA_4844 "6-phosphofructokinase 0.361 0.705 0.231 1.1e-07
TAIR|locus:2011671 AT1G76550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2562 (906.9 bits), Expect = 2.4e-266, P = 2.4e-266
 Identities = 479/581 (82%), Positives = 533/581 (91%)

Query:    37 MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
             +QGTTVRVE GD TT A   D H I+R+FPHT GQPLAHFLRATAKV DAQIITEHP  R
Sbjct:    29 LQGTTVRVELGDGTTVAKAGDAHIIARAFPHTLGQPLAHFLRATAKVADAQIITEHPVKR 88

Query:    97 VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYK 156
             VGIVFCGRQ+PGGHNVVWGLY+ALK+HN K+T            AQKTLE+T E+L TYK
Sbjct:    89 VGIVFCGRQAPGGHNVVWGLYEALKVHNAKNTLLGFLGGSEGLFAQKTLEITDEVLQTYK 148

Query:   157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
             NQGGYDMLGRTKDQIRTTEQVNAAL AC +L LD LVIIGGVTSNTDAA+LAE FAEAKC
Sbjct:   149 NQGGYDMLGRTKDQIRTTEQVNAALKACTDLKLDSLVIIGGVTSNTDAAHLAEFFAEAKC 208

Query:   217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
              TKVVGVPVT+NGDLKNQFVE NVGFDT CKVNSQLISN+CTDALSAEKYYYF+RLMGR+
Sbjct:   209 STKVVGVPVTINGDLKNQFVEANVGFDTTCKVNSQLISNICTDALSAEKYYYFVRLMGRK 268

Query:   277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
              SHVALECTLQSHPNMVILGEEV ASKLT+FD+ KQICDAVQARAEQDKNHGVIL+PEGL
Sbjct:   269 HSHVALECTLQSHPNMVILGEEVTASKLTIFDIIKQICDAVQARAEQDKNHGVILIPEGL 328

Query:   337 IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA 396
             +ESIPE+YALLKEIH LL++GV VDNIS+QLS W+SALFEFLPPFIKKQLLL PESDDSA
Sbjct:   329 VESIPELYALLKEIHGLLKEGVQVDNISTQLSSWSSALFEFLPPFIKKQLLLHPESDDSA 388

Query:   397 QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 456
             QLSQIETEKLLA+LVE EMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL
Sbjct:   389 QLSQIETEKLLAYLVETEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 448

Query:   457 GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN 516
             GH+CYHILAAGLNGYMATVTNLK+P NKW+CGAAPI++MMTVKRWSQN G+++IGRP I+
Sbjct:   449 GHVCYHILAAGLNGYMATVTNLKSPVNKWKCGAAPISAMMTVKRWSQNSGSTTIGRPVIH 508

Query:   517 PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE 576
             PA+VD++GKAY+LLRQNA +FL++D+YRNPGPVQ+DGPGADAKAV+LCVED+DYMG+IK+
Sbjct:   509 PASVDLKGKAYDLLRQNAQKFLMEDMYRNPGPVQYDGPGADAKAVSLCVEDQDYMGKIKK 568

Query:   577 LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSAS 617
             LQ+YLD+VRTIVKPGCSQ+VLKAALSVMASVT+VL+ +S+S
Sbjct:   569 LQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISSS 609
GO:0003872 "6-phosphofructokinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005945 "6-phosphofructokinase complex" evidence=IEA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0010317 "pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex" evidence=ISS
GO:0047334 "diphosphate-fructose-6-phosphate 1-phosphotransferase activity" evidence=IEA;ISS;IMP
GO:0015979 "photosynthesis" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2037385 AT1G20950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008920 AT1G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136652 MEE51 "maternal effect embryo arrest 51" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1143 CHY_1143 "6-phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O34529 pfkA "6-phosphofructokinase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] Back     alignment and assigned GO terms
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4844 BA_4844 "6-phosphofructokinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P21342PFPA_SOLTU2, ., 7, ., 1, ., 9, 00.85730.92290.9334N/Ano
Q41140PFPA_RICCO2, ., 7, ., 1, ., 9, 00.88980.93250.9416N/Ano
Q9SYP2PFPA1_ARATH2, ., 7, ., 1, ., 9, 00.83610.93730.9511nono
Q9C9K3PFPA2_ARATH2, ., 7, ., 1, ., 9, 00.85040.92290.9319yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.900.994
3rd Layer2.7.10.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
PLN03028610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 0.0
TIGR02477539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 0.0
PRK07085555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 0.0
cd00765550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 1e-163
PLN02251568 PLN02251, PLN02251, pyrophosphate-dependent phosph 1e-161
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 1e-125
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 1e-112
PTZ002871419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 1e-104
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 2e-61
PTZ004681328 PTZ00468, PTZ00468, phosphofructokinase family pro 1e-60
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 2e-59
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 2e-13
PTZ00286459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 3e-12
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 5e-10
PLN02564484 PLN02564, PLN02564, 6-phosphofructokinase 1e-09
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 1e-08
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 2e-08
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 2e-08
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 2e-07
pfam00365279 pfam00365, PFK, Phosphofructokinase 5e-07
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 9e-06
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 0.003
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information 
 Score = 1263 bits (3269), Expect = 0.0
 Identities = 517/589 (87%), Positives = 556/589 (94%), Gaps = 2/589 (0%)

Query: 37  MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
           +QGTTVRVE GD+TT ADPAD H+ISR+FPHTYGQPLAHFLRATAKVPDAQ+ITEHPA+R
Sbjct: 22  LQGTTVRVELGDATTAADPADAHAISRAFPHTYGQPLAHFLRATAKVPDAQVITEHPAVR 81

Query: 97  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 156
           VG+VFCGRQSPGGHNV+WGL+DALK HNP S LLGFLGG+EGLFAQKTLE+T ++LSTYK
Sbjct: 82  VGVVFCGRQSPGGHNVIWGLHDALKAHNPNSVLLGFLGGTEGLFAQKTLEITDDVLSTYK 141

Query: 157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
           NQGGYD+LGRTKDQIRTTEQVNAAL AC+ L LDGLVIIGGVTSNTDAA LAETFAEAKC
Sbjct: 142 NQGGYDLLGRTKDQIRTTEQVNAALAACEALKLDGLVIIGGVTSNTDAAQLAETFAEAKC 201

Query: 217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
            TKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR+
Sbjct: 202 KTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRK 261

Query: 277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
           ASHVALEC LQSHPNMVILGEEVAASKLTLFD+TKQICDAVQARAEQDKNHGVIL+PEGL
Sbjct: 262 ASHVALECALQSHPNMVILGEEVAASKLTLFDITKQICDAVQARAEQDKNHGVILIPEGL 321

Query: 337 IESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSA 396
           IESIPEVYALL+EIH LL+QGV VDNISSQLSPWASALFEFLPPFIKKQLLL PESDDSA
Sbjct: 322 IESIPEVYALLQEIHGLLKQGVSVDNISSQLSPWASALFEFLPPFIKKQLLLHPESDDSA 381

Query: 397 QLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 456
           QLSQIETEKLLA LVE EMNKR KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL
Sbjct: 382 QLSQIETEKLLAQLVETEMNKRTKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVL 441

Query: 457 GHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPGASSIGRPAIN 516
           GHICYHILAAGLNGYMATVTNLK+P NKWRCGAAPIT+MM+VKRWS+ PGAS IG+PAI+
Sbjct: 442 GHICYHILAAGLNGYMATVTNLKSPVNKWRCGAAPITAMMSVKRWSRGPGASQIGKPAIH 501

Query: 517 PATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKE 576
           PA VD++GKAYELLRQNA+ FL+DDLYRNPGP+QFDGPGADAK +TLCVED+DYMGRIK+
Sbjct: 502 PAPVDLKGKAYELLRQNASSFLMDDLYRNPGPLQFDGPGADAKPITLCVEDQDYMGRIKK 561

Query: 577 LQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLSAMSASG--GQTTL 623
           LQ+YLD+VRTIVKPGCSQEVLKAALS MASVT+VL+ MS+    G T L
Sbjct: 562 LQEYLDKVRTIVKPGCSQEVLKAALSSMASVTDVLTVMSSPSNRGLTPL 610

Length = 610
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 623
PLN03028610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PLN02251568 pyrophosphate-dependent phosphofructokinase 100.0
cd00765550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
TIGR02477539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
PTZ002871419 6-phosphofructokinase; Provisional 100.0
PRK07085555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PTZ004681328 phosphofructokinase family protein; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PLN02564484 6-phosphofructokinase 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
PTZ00286459 6-phospho-1-fructokinase; Provisional 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PLN02884411 6-phosphofructokinase 100.0
PRK14072416 6-phosphofructokinase; Provisional 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.73
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 89.95
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 89.93
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.4
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 89.16
cd01537264 PBP1_Repressors_Sugar_Binding_like Ligand-binding 89.06
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 86.56
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 86.03
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 85.59
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 84.66
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 83.82
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 83.64
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 82.88
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.63
PLN02929301 NADH kinase 82.53
cd06321271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 82.49
), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844100 GARS_N: Phosphoribosylglycinamide synthetase, N do 82.11
PF00465366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 81.83
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 80.88
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.3e-162  Score=1348.59  Aligned_cols=597  Identities=87%  Similarity=1.338  Sum_probs=573.6

Q ss_pred             hcccCCCccCcCCCceeeecCCCcccCCCCChhHHhhhCCCcCCCCceeEecCccCCCCcccccCCCceEEEEEecCCCC
Q 006961           27 LLQMFSFNANMQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQS  106 (623)
Q Consensus        27 ~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IgIv~sGG~a  106 (623)
                      +..+|+||+.|++..++++.|++++++++.++++|+++||||||+|.++|.++....|+++.++.+..+|||||||||||
T Consensus        12 ~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rIgIv~sGG~A   91 (610)
T PLN03028         12 SLYQPELPPCLQGTTVRVELGDATTAADPADAHAISRAFPHTYGQPLAHFLRATAKVPDAQVITEHPAVRVGVVFCGRQS   91 (610)
T ss_pred             HhCCCCCChhhCCCcEEEeeCCCccccCcccHHHHHHhChhhhCCcceEEecccccCccccccCCCcccEEEEEccCCCC
Confidence            44799999999987789999999999976677999999999999999999985433478888877778999999999999


Q ss_pred             CchHHHHHHHHHHHHhcCCCCEEEEEccChhhhhcCCeeecCHhHHhchhhcCCcccccCcCCCCCChHHHHHHHHHHHH
Q 006961          107 PGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKN  186 (623)
Q Consensus       107 PG~nnVI~gl~~~l~~~~~~~~v~Gf~~G~~GL~~~~~~eLt~~~v~~~~n~GG~~~lGS~R~k~~t~e~~~~i~~~l~~  186 (623)
                      |||||||+|++++++..+++++||||++||+||+++++++||++.++.|+|+|||++|||+|.++++++++++++++|++
T Consensus        92 PG~nnvI~Gvv~~~~~~~~~~~V~G~~~G~~GLl~~~~v~Lt~~~v~~~~n~GG~~iLGSsR~~l~~~e~~~~i~e~l~~  171 (610)
T PLN03028         92 PGGHNVIWGLHDALKAHNPNSVLLGFLGGTEGLFAQKTLEITDDVLSTYKNQGGYDLLGRTKDQIRTTEQVNAALAACEA  171 (610)
T ss_pred             ccHHHHHHHHHHHHHHhCCCcEEEEEccCHHHhcCCCeEECCHHHHHHHHhcCCchhccCcCCCcCCHHHHHHHHHHHHH
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEecCcchHHHHHHHHHHHHhcCCCCeEEEeeecccCCCCCCCCCCCcChhhHHHHHHHHHHHHHHHHhhccCc
Q 006961          187 LNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKY  266 (623)
Q Consensus       187 ~~Id~LviIGGdgS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDl~~~~ie~S~GFdTA~~~~s~~I~ni~~da~S~~k~  266 (623)
                      ++||+||+||||||+++|++|+|||++++++++||||||||||||+++.+|+|||||||+++++++|+||++||.|+++|
T Consensus       172 l~Id~LvvIGGddS~~~A~~Lae~~~~~~~~i~VIGIPKTIDNDL~~~~td~s~GFdTA~k~~ae~I~ni~~dA~S~~~~  251 (610)
T PLN03028        172 LKLDGLVIIGGVTSNTDAAQLAETFAEAKCKTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKY  251 (610)
T ss_pred             cCCCEEEEeCCchHHHHHHHHHHHHHHcCCCceEEEeceeeeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhCCe
Confidence            99999999999999999999999999999999999999999999998778899999999999999999999999999889


Q ss_pred             eEEEEecCCCccHHHHHhhhhcCCcEEEECCcchhccCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCChhHHHH
Q 006961          267 YYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYAL  346 (623)
Q Consensus       267 ~~fVevMGR~aG~LAL~~aLat~pniilIpEe~~~~~~tL~~iv~~I~~~I~~R~~~gk~~gVIvVsEGl~~~ipe~~~l  346 (623)
                      |||||+|||+||||||+||||+|||+||||||++.+++||.++++.|++.|++|+++||+|||||||||+++++|+++.|
T Consensus       252 ~~~VevMGR~aG~LAl~~aLat~pniilI~EE~~~~~~tL~~iv~~i~~~I~~r~~~gk~~gvIvVsEGlie~ipe~~~l  331 (610)
T PLN03028        252 YYFIRLMGRKASHVALECALQSHPNMVILGEEVAASKLTLFDITKQICDAVQARAEQDKNHGVILIPEGLIESIPEVYAL  331 (610)
T ss_pred             EEEEEeCCcchHHHHHHHHHhcCCCEEEecCcccccccccchHHHHHHHHHHHHHHcCCCcEEEEEeCCccccCchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCCccccccCChhhhhhhccChhHHHhhhhcCCCCCCCcccchhhhHHHHHHHHHHHHHHHhhccccCC
Q 006961          347 LKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKG  426 (623)
Q Consensus       347 i~el~~~~~~~~~~~~~~~~ls~~s~~lf~~lp~~i~~~l~~~rD~~Gn~~ls~I~te~lL~~lV~~el~~~~~~g~y~g  426 (623)
                      |+|+++++.++...+++.++||||+++||++||++||+||+.++|+|||+|+++|+||++|++||+++|++|+++|+|+|
T Consensus       332 i~el~~~~~~g~~~~~~~~~ls~~~~~l~~~lP~~i~~qLl~~~D~~G~~qls~i~te~lL~~lV~~eL~~r~~~g~~~~  411 (610)
T PLN03028        332 LQEIHGLLKQGVSVDNISSQLSPWASALFEFLPPFIKKQLLLHPESDDSAQLSQIETEKLLAQLVETEMNKRTKEGTYKG  411 (610)
T ss_pred             HHHHHHHHhcCcchhhhhhhcCHHHHHHHhhccHHHHHHHhhccCCCCCeeecchhHHHHHHHHHHHHHHHHhhcccccc
Confidence            99999999877666778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCCCceeEEecchHhhhhhccccCCCC
Q 006961          427 KKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQNPG  506 (623)
Q Consensus       427 ~~f~~~~~~lGY~~R~~~PS~fD~~~a~~LG~~Av~li~~G~tG~mv~i~n~~~~~~~w~~~~vPl~~~~~~e~~r~g~~  506 (623)
                      .+|++++|+|||+|||+.||+||++|||.||+.|++++.+|.||||++|+|++.++++|+++++||++|||+||+.+|++
T Consensus       412 ~~f~~~~h~~GYe~R~~~PS~fD~~yay~LG~~A~~l~~~G~tG~M~~I~nl~~~~~~w~~~~vPl~~~m~~~~~~~~~~  491 (610)
T PLN03028        412 KKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKSPVNKWRCGAAPITAMMSVKRWSRGPG  491 (610)
T ss_pred             ccccccccccChhhhccCCCHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEeCCCCCeEEEEcccCHHHHhhHHhhccccc
Confidence            66999999999999999999999999999999999999999999999999999999999999999999999999445766


Q ss_pred             CCCCCcceeeeeEEcCCChHHHHHHHHhhhccccCcccCCCcccccCCCCCCCcceeEecccchhhhHHHHHHHHHHhcc
Q 006961          507 ASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRT  586 (623)
Q Consensus       507 ~~~~~~p~i~~~~Vdl~g~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~tl~~~~~~y~~~~~~~~~~~~~~~~  586 (623)
                      .+.+++|+|+|++|||+|++|++|+++|++|+++|+|++||||||+||.+|++++||.+|+++|++||+++++|+++||+
T Consensus       492 ~~~~~~p~i~~~~v~l~g~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~tl~~e~~~~~~~~~~~~~~~~~~~~  571 (610)
T PLN03028        492 ASQIGKPAIHPAPVDLKGKAYELLRQNASSFLMDDLYRNPGPLQFDGPGADAKPITLCVEDQDYMGRIKKLQEYLDKVRT  571 (610)
T ss_pred             ccccCCceeeccccCCCcHHHHHHHHHHHHhhccCcCcCCCCccccCCcccCCceEeehhhhhhHHHHHHHHHHHHHHHh
Confidence            66689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHhhccCC--CCCCC
Q 006961          587 IVKPGCSQEVLKAALSVMASVTEVLSAMSASG--GQTTL  623 (623)
Q Consensus       587 ~~~~g~~~~~l~~a~~~~~~~~~~~~~~~~~~--~~~~~  623 (623)
                      +|+||||+|+||+|+++|+||+|+|++||+|+  ++||+
T Consensus       572 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~~~~  610 (610)
T PLN03028        572 IVKPGCSQEVLKAALSSMASVTDVLTVMSSPSNRGLTPL  610 (610)
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence            99999999999999999999999999999999  88775

>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PLN02564 6-phosphofructokinase Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>cd01537 PBP1_Repressors_Sugar_Binding_like Ligand-binding domain of the LacI-GalR family of transcription regulators and the sugar-binding domain of ABC-type transport systems Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
1kzh_A555 Structure Of A Pyrophosphate-dependent Phosphofruct 5e-99
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 1e-08
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 4e-07
3pfk_A319 Phosphofructokinase. Structure And Control Length = 7e-07
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 1e-06
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 6e-06
2hig_A487 Crystal Structure Of Phosphofructokinase Apoenzyme 5e-04
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure 
Iteration: 1

 Score =  358 bits (919), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 185/537 (34%), Positives = 307/537 (57%), Gaps = 30/537 (5%)
Query: 40  TTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGI 99
             + + +G++T      D  ++   F +TYG P+  F    + +  ++      A+ +GI
Sbjct: 26  NNISLVYGENTEAIQ--DRQALKEFFKNTYGLPIISFTEGESSLSFSK------ALNIGI 77
Query: 100 VFCGRQSPGGHNVVWGLYDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYKNQG 159
           +  G  +PGGHNV+ G++DA+K  NP S                 +E+T+ ++++Y+N G
Sbjct: 78  ILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTG 137
Query: 160 GYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTK 219
           G+D++   + +I T E  N AL   K  NL+ ++IIGG  SNT+AA LAE F +     +
Sbjct: 138 GFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQ 197
Query: 220 VVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASH 279
           V+GVP T++ DL+N  +E + GFD+  K+ S+LI N+C DA+S +KY++F++LMGR ASH
Sbjct: 198 VIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASH 257
Query: 280 VALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIES 339
           VALEC L++HPN+ I+ EEV A K TL ++  ++   +  R+    N GV+++PEGLIE 
Sbjct: 258 VALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEF 317
Query: 340 IPEVYALLKEIHSLLR------QGVPVDNIS----SQLSPWASALFEFLPPFIKKQL--- 386
           IPEV +L+ E+  +        +G+ ++ +     ++LS +   ++  LP FI+ +L   
Sbjct: 318 IPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKS 377
Query: 387 LLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPS 446
           +L+ +   +  +S++ TEKL   +++  +N   K G YKG  F  + HFFGY+ R + PS
Sbjct: 378 ILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKG-SFTPVDHFFGYEGRSAFPS 436
Query: 447 KFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTV-KRWSQNP 505
            FD DY Y LG+    ++  GL GYM+ + NL      W  G  P+T +M + +R+ +  
Sbjct: 437 NFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEERYGEK- 495
Query: 506 GASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVT 562
                 +P I  A VD+ G+ ++   +N  ++ L++LY  PGPVQ+ G       +T
Sbjct: 496 ------KPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEIT 546
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 0.0
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 9e-22
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 2e-11
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 5e-11
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 8e-11
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 2e-09
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 3e-06
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 2e-09
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 5e-07
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 4e-09
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 6e-07
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 2e-08
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 1e-05
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 5e-07
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 7e-06
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
 Score =  606 bits (1563), Expect = 0.0
 Identities = 189/543 (34%), Positives = 305/543 (56%), Gaps = 26/543 (4%)

Query: 37  MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
           ++     +       T    D  ++   F +TYG P+  F    + +      +   A+ 
Sbjct: 21  LKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGESSL------SFSKALN 74

Query: 97  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 156
           +GI+  G  +PGGHNV+ G++DA+K  NP S L GF GG  GL     +E+T+ ++++Y+
Sbjct: 75  IGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYR 134

Query: 157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
           N GG+D++   + +I T E  N AL   K  NL+ ++IIGG  SNT+AA LAE F +   
Sbjct: 135 NTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGE 194

Query: 217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
             +V+GVP T++ DL+N  +E + GFD+  K+ S+LI N+C DA+S +KY++F++LMGR 
Sbjct: 195 NIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRS 254

Query: 277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
           ASHVALEC L++HPN+ I+ EEV A K TL ++  ++   +  R+    N GV+++PEGL
Sbjct: 255 ASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGL 314

Query: 337 IESIPEVYALLKEIHSLLRQGVPV----------DNISSQLSPWASALFEFLPPFIKKQL 386
           IE IPEV +L+ E+  +  +              +   ++LS +   ++  LP FI+ +L
Sbjct: 315 IEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFEL 374

Query: 387 ---LLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGS 443
              +L+ +   +  +S++ TEKL   +++  +N   K G YKG  F  + HFFGY+ R +
Sbjct: 375 IKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKG-SFTPVDHFFGYEGRSA 433

Query: 444 LPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTVKRWSQ 503
            PS FD DY Y LG+    ++  GL GYM+ + NL      W  G  P+T +M ++    
Sbjct: 434 FPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEE--- 490

Query: 504 NPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVTL 563
                   +P I  A VD+ G+ ++   +N  ++ L++LY  PGPVQ+ G       +T 
Sbjct: 491 ---RYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITE 547

Query: 564 CVE 566
            ++
Sbjct: 548 TLK 550
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query623
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 93.4
3m9w_A313 D-xylose-binding periplasmic protein; xylose bindi 88.67
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 88.22
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 83.31
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 83.2
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-133  Score=1112.56  Aligned_cols=527  Identities=37%  Similarity=0.688  Sum_probs=500.3

Q ss_pred             hcccCCCccCcCCCc--eeeecCCCcccCCCCChhHHhhhCCCcCCCCceeEecCccCCCCcccccCCCceEEEEEecCC
Q 006961           27 LLQMFSFNANMQGTT--VRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGR  104 (623)
Q Consensus        27 ~~~~p~lp~~l~~~~--~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IgIv~sGG  104 (623)
                      +..+|+||+.|++..  ++++.|+.++++  .|+++|+++||||||+|.++|++++.   +   ....+.+||||+||||
T Consensus        11 ~~~~p~lp~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~fp~~~~~p~~~~~~~~~---~---~~~~~~~~igIltsGG   82 (555)
T 2f48_A           11 QKYIPKLPNILKKDFNNISLVYGENTEAI--QDRQALKEFFKNTYGLPIISFTEGES---S---LSFSKALNIGIILSGG   82 (555)
T ss_dssp             TTCCCCCCGGGGSCGGGEEEEECCCCCCS--SCHHHHHHHTTTTTTCCCEEEEESCC---C---CSCCSCCEEEEEEBSS
T ss_pred             hcCCCCCCHHHhCCccceeeecCCcccCc--cCHHHHHHhCccccCCCcEEEecCCc---c---cccCCCcEEEEECcCC
Confidence            348999999999863  899999999887  99999999999999999999998752   1   1356678999999999


Q ss_pred             CCCchHHHHHHHHHHHHhcCCCCEEEEEccChhhhhcCCeeecCHhHHhchhhcCCcccccCcCCCCCChHHHHHHHHHH
Q 006961          105 QSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTAC  184 (623)
Q Consensus       105 ~aPG~nnVI~gl~~~l~~~~~~~~v~Gf~~G~~GL~~~~~~eLt~~~v~~~~n~GG~~~lGS~R~k~~t~e~~~~i~~~l  184 (623)
                      |||||||||+|++++++..+++++||||++||+||+++++++|+++.|+.|+++|||++|||+|.++++++++++++++|
T Consensus        83 daPGmNa~Ir~vv~~~~~~~~~~~v~Gi~~G~~GL~~~~~~~L~~~~v~~i~~~GGstiLGssR~~~~~~e~~~~~~~~l  162 (555)
T 2f48_A           83 PAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFVA  162 (555)
T ss_dssp             CCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHhcCCCEEEEEecChHHhcCCCEEECCHHHHHHHHhCCCCcCCCcCCCCCCCHHHHHHHHHHH
Confidence            99999999999999988888999999999999999999999999999999999999559999999998999999999999


Q ss_pred             HHcCCCEEEEecCcchHHHHHHHHHHHHhcCCCCeEEEeeecccCCCCCCCCCCCcChhhHHHHHHHHHHHHHHHHhhcc
Q 006961          185 KNLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAE  264 (623)
Q Consensus       185 ~~~~Id~LviIGGdgS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDl~~~~ie~S~GFdTA~~~~s~~I~ni~~da~S~~  264 (623)
                      ++++||+||+||||||+++|+.|++++++++++++||||||||||||+++.+|+|||||||+++++++|++|++||.|++
T Consensus       163 ~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkTIDNDl~~t~id~tiGFdTA~~~~~~aId~i~~da~s~~  242 (555)
T 2f48_A          163 KENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTK  242 (555)
T ss_dssp             HHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcCCCCCChhHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             CceEEEEecCCCccHHHHHhhhhcCCcEEEECCcchhccCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCChhHH
Q 006961          265 KYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVY  344 (623)
Q Consensus       265 k~~~fVevMGR~aG~LAL~~aLat~pniilIpEe~~~~~~tL~~iv~~I~~~I~~R~~~gk~~gVIvVsEGl~~~ipe~~  344 (623)
                      +||||||||||+||||||+||||+|||+|||||++++++++|++++++|++.|++|+.+||+|+|||||||+++++|+++
T Consensus       243 ~rv~iVEvMGR~aG~lAl~a~LA~gad~ilIPE~~~~~~~~L~~~~~~i~~~i~~r~~~gk~~~IIvVaEG~~~~~~~~~  322 (555)
T 2f48_A          243 KYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEVK  322 (555)
T ss_dssp             CCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHHH
T ss_pred             CcEEEEEeCCcCHHHHHHHHHhhcCCCEEEecCccccccCCHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCCccccchHH
Confidence            89999999999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCC----------CccccccCChhhhhhhccChhHHHhhhh---cCCCCCCCcccchhhhHHHHHHHH
Q 006961          345 ALLKEIHSLLRQGVP----------VDNISSQLSPWASALFEFLPPFIKKQLL---LQPESDDSAQLSQIETEKLLAHLV  411 (623)
Q Consensus       345 ~li~el~~~~~~~~~----------~~~~~~~ls~~s~~lf~~lp~~i~~~l~---~~rD~~Gn~~ls~I~te~lL~~lV  411 (623)
                      .|++|++++++++..          .+.+.++||+|++++|.+||++|++||+   .++|+|||+++++|+||++|+++|
T Consensus       323 ~li~el~~~l~~~~~~~~~l~~~~~~~~~~~~Ls~~~~~~~~~lp~~i~~~l~~~~~~~D~~Gn~~l~~i~t~~~L~~~v  402 (555)
T 2f48_A          323 SLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMI  402 (555)
T ss_dssp             HHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHHH
T ss_pred             HHHHHHhhhhhcccccccccccccchhhhhhccchhhhhhhccchHHHHHHhhccccccCCCCCEeeccccHHHHHHHHH
Confidence            999999998875411          1346788999999999999999999987   689999999999999999999999


Q ss_pred             HHHHHHHhhccccCCccceeeeecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCCCceeEEecc
Q 006961          412 EVEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAP  491 (623)
Q Consensus       412 ~~el~~~~~~g~y~g~~f~~~~~~lGY~~R~~~PS~fD~~~a~~LG~~Av~li~~G~tG~mv~i~n~~~~~~~w~~~~vP  491 (623)
                      +++|++++.+++|++. |++|+|+|||+||||.||+|||.||++||+.||+++++|.||+|++++|++.++|+|++.++|
T Consensus       403 ~~~l~~~~~~~~~~~~-~~~r~~~lGy~qRgg~PS~~Dr~la~~lG~~Av~~~~~G~tG~mv~i~~~~~~~~~w~~~~vP  481 (555)
T 2f48_A          403 QSRLNDMKKRGEYKGS-FTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVP  481 (555)
T ss_dssp             HHHHHHHHTTTCCCSC-CCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEE
T ss_pred             HHHHHHHhcccCcccc-eeeeeccCCcchhCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCCCCccceEEEeee
Confidence            9999999999999887 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhhhccccCCCCCCCCCcceeeeeEEcCCChHHHHHHHHhhhccccCcccCCCcccccCCCC--CCCcceeEeccc
Q 006961          492 ITSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGA--DAKAVTLCVEDR  568 (623)
Q Consensus       492 l~~~~~~e~~r~g~~~~~~~~p~i~~~~Vdl~g~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~--~~~~~tl~~~~~  568 (623)
                      |++|||+|| |+|     +.+|+|++++|||+|++|++|+++|++|+++|+|||||||||+||.+  |++++||.||+.
T Consensus       482 l~~~~n~ek-~~g-----~~~p~i~~~~Vdl~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e~~  554 (555)
T 2f48_A          482 LTMLMNMEE-RYG-----EKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLELF  554 (555)
T ss_dssp             GGGGEEEEE-ETT-----EEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHHTC
T ss_pred             HHHHhhhhh-hcC-----ccccceeeeeeCCCCHHHHHHHHHHHHhhhcCcccCCCCEeecCccccccCCCceeecccc
Confidence            999999999 999     89999999999999999999999999999999999999999999998  999999999864
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 623
d2f48a1550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 1e-160
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 7e-35
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 6e-31
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 0.002
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  467 bits (1203), Expect = e-160
 Identities = 190/541 (35%), Positives = 302/541 (55%), Gaps = 28/541 (5%)

Query: 37  MQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIR 96
           ++     +       T    D  ++   F +TYG P+  F    + +          A+ 
Sbjct: 18  LKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGESSLS------FSKALN 71

Query: 97  VGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYK 156
           +GI+  G  +PGGHNV+ G++DA+K  NP S L GF GG  GL     +E+T+ ++++Y+
Sbjct: 72  IGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYR 131

Query: 157 NQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDGLVIIGGVTSNTDAAYLAETFAEAKC 216
           N GG+D++   + +I T E  N AL   K  NL+ ++IIGG  SNT+AA LAE F +   
Sbjct: 132 NTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGE 191

Query: 217 PTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRR 276
             +V+GVP T++ DL+N  +E + GFD+  K+ S+LI N+C DA+S +KY++F++LMGR 
Sbjct: 192 NIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRS 251

Query: 277 ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGL 336
           ASHVALEC L++HPN+ I+ EEV A K TL ++  ++   +  R+    N GV+++PEGL
Sbjct: 252 ASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGL 311

Query: 337 IESIPEVYALLKEIHSLLRQGVP----------VDNISSQLSPWASALFEFLPPFIKKQL 386
           IE IPEV +L+ E+  +  +              +   ++LS +   ++  LP FI+ +L
Sbjct: 312 IEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFEL 371

Query: 387 LLQPESDDS---AQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKKFNAICHFFGYQARGS 443
           +      D      +S++ TEKL   +++  +N   K G YKG  F  + HFFGY+ R +
Sbjct: 372 IKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKG-SFTPVDHFFGYEGRSA 430

Query: 444 LPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPITSMMTV-KRWS 502
            PS FD DY Y LG+    ++  GL GYM+ + NL      W  G  P+T +M + +R+ 
Sbjct: 431 FPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEERYG 490

Query: 503 QNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGADAKAVT 562
           +        +P I  A VD+ G+ ++   +N  ++ L++LY  PGPVQ+ G       +T
Sbjct: 491 EK-------KPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEIT 543

Query: 563 L 563
            
Sbjct: 544 E 544
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query623
d2f48a1550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 83.32
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 81.86
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

Probab=100.00  E-value=9.9e-138  Score=1147.42  Aligned_cols=524  Identities=37%  Similarity=0.699  Sum_probs=500.5

Q ss_pred             cccCCCccCcCCC--ceeeecCCCcccCCCCChhHHhhhCCCcCCCCceeEecCccCCCCcccccCCCceEEEEEecCCC
Q 006961           28 LQMFSFNANMQGT--TVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQ  105 (623)
Q Consensus        28 ~~~p~lp~~l~~~--~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IgIv~sGG~  105 (623)
                      .++|+||++|+++  .+++.+++++.++  .|+++|+++||+|+|+|.++|.++.+.      ....+++||||||||||
T Consensus         9 ~~~p~lp~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~fp~~~~~p~~~~~~~~~~------~~~~~~~rIgIl~sGG~   80 (550)
T d2f48a1           9 KYIPKLPNILKKDFNNISLVYGENTEAI--QDRQALKEFFKNTYGLPIISFTEGESS------LSFSKALNIGIILSGGP   80 (550)
T ss_dssp             TCCCCCCGGGGSCGGGEEEEECCCCCCS--SCHHHHHHHTTTTTTCCCEEEEESCCC------CSCCSCCEEEEEEBSSC
T ss_pred             hCCCCCChhHhCccceeeeccCCccccc--CCHHHHHHHhHHhcCCceeeeccCCCC------CCcCCCCEEEEECcCCC
Confidence            4799999999874  4688899988888  899999999999999999999988641      23356899999999999


Q ss_pred             CCchHHHHHHHHHHHHhcCCCCEEEEEccChhhhhcCCeeecCHhHHhchhhcCCcccccCcCCCCCChHHHHHHHHHHH
Q 006961          106 SPGGHNVVWGLYDALKLHNPKSTLLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACK  185 (623)
Q Consensus       106 aPG~nnVI~gl~~~l~~~~~~~~v~Gf~~G~~GL~~~~~~eLt~~~v~~~~n~GG~~~lGS~R~k~~t~e~~~~i~~~l~  185 (623)
                      |||+||||+|+++++++++++++||||++||+||+++++++|+++.++.|+|+|||+++||+|+++++++++++++++|+
T Consensus        81 aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~~~~~GG~~l~~s~r~~~~~~e~~~~i~~~l~  160 (550)
T d2f48a1          81 APGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFVAK  160 (550)
T ss_dssp             CTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhCCCCEEEEECcchHHhcCCCEEECCHHHHhhHHhCCCcEecCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999999999998899999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HcCCCEEEEecCcchHHHHHHHHHHHHhcCCCCeEEEeeecccCCCCCCCCCCCcChhhHHHHHHHHHHHHHHHHhhccC
Q 006961          186 NLNLDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEK  265 (623)
Q Consensus       186 ~~~Id~LviIGGdgS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDl~~~~ie~S~GFdTA~~~~s~~I~ni~~da~S~~k  265 (623)
                      +++||+||+||||||+++|+.|+||+++++++|+||||||||||||+++++|+|||||||+++++++|+|+++||.|+++
T Consensus       161 ~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdTA~~~~~~~i~~l~~da~S~~~  240 (550)
T d2f48a1         161 ENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKK  240 (550)
T ss_dssp             HTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hcCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCccccccccHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999999999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             ceEEEEecCCCccHHHHHhhhhcCCcEEEECCcchhccCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCChhHHH
Q 006961          266 YYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYA  345 (623)
Q Consensus       266 ~~~fVevMGR~aG~LAL~~aLat~pniilIpEe~~~~~~tL~~iv~~I~~~I~~R~~~gk~~gVIvVsEGl~~~ipe~~~  345 (623)
                      +|||||||||+||||||+||||+|||+|||||+++.++++|.+++++|++.|++|+.+||+|||||||||+++++||++.
T Consensus       241 ~~~~VevMGR~aG~lAl~~alat~a~~ilipE~~~~~~~~L~~i~~~i~~~I~kR~~~gk~~gvIvV~EGli~~ipe~~~  320 (550)
T d2f48a1         241 YWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEVKS  320 (550)
T ss_dssp             CEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHHHH
T ss_pred             ceEEEEEecCCCcHHHHHHHHhcCCceEEecccccchhhhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcccccchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCC----------CccccccCChhhhhhhccChhHHHhhh---hcCCCCCCCcccchhhhHHHHHHHHH
Q 006961          346 LLKEIHSLLRQGVP----------VDNISSQLSPWASALFEFLPPFIKKQL---LLQPESDDSAQLSQIETEKLLAHLVE  412 (623)
Q Consensus       346 li~el~~~~~~~~~----------~~~~~~~ls~~s~~lf~~lp~~i~~~l---~~~rD~~Gn~~ls~I~te~lL~~lV~  412 (623)
                      ||.|++++++++..          .+.+.++|++|++++|.+||.+|++||   +.+||+|||+||++|+||++|+++|+
T Consensus       321 Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~~~l~~~lp~~i~~qll~~~~~rD~~G~~~ls~I~~e~lLa~~V~  400 (550)
T d2f48a1         321 LMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMIQ  400 (550)
T ss_dssp             HHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHhhhhcccccccccchhhhhhhhhhcchhhhhhhhcccHHHHHHHhhcccccCCCCCeeeccccHHHHHHHHHH
Confidence            99999998876532          134678899999999999999999999   56899999999999999999999999


Q ss_pred             HHHHHHhhccccCCccceeeeecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCCCceeEEecch
Q 006961          413 VEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCGAAPI  492 (623)
Q Consensus       413 ~el~~~~~~g~y~g~~f~~~~~~lGY~~R~~~PS~fD~~~a~~LG~~Av~li~~G~tG~mv~i~n~~~~~~~w~~~~vPl  492 (623)
                      ++|++++.++.|++. |++++|+|||+|||+.||+||+.|||+||+.|++++++|.||||++|+|++.++++|+++++||
T Consensus       401 ~~L~~~~~~~~~~~~-f~~~~h~~GYe~R~a~PS~fD~~~a~~lG~~Av~~~~~G~tG~M~~I~~l~~~~~~w~~~~iPl  479 (550)
T d2f48a1         401 SRLNDMKKRGEYKGS-FTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPL  479 (550)
T ss_dssp             HHHHHHHTTTCCCSC-CCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEEG
T ss_pred             HHHHHhhhhcccccc-eeeeecccccceeCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCCCCCceeEECCccH
Confidence            999999999999998 9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhccccCCCCCCCCCcceeeeeEEcCCChHHHHHHHHhhhccccCcccCCCcccccCCCC--CCCcceeEec
Q 006961          493 TSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFDGPGA--DAKAVTLCVE  566 (623)
Q Consensus       493 ~~~~~~e~~r~g~~~~~~~~p~i~~~~Vdl~g~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~--~~~~~tl~~~  566 (623)
                      ++|||+|+ |+|     +.+|+|+|++|||+|++|++|+++|++|+++|+||+||||||+||++  |++|+||.||
T Consensus       480 ~~~m~~e~-r~g-----~~~~~i~k~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e  549 (550)
T d2f48a1         480 TMLMNMEE-RYG-----EKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLE  549 (550)
T ss_dssp             GGGEEEEE-ETT-----EEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHH
T ss_pred             HHHhhHHH-hcC-----CcCcceecceeCCCcHHHHHHHHHHHHHHhcCcCcCCCCcccCCchhhcccccchhccc
Confidence            99999998 999     89999999999999999999999999999999999999999999986  9999999887
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure