Citrus Sinensis ID: 007223


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
ccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHcccHHHHHHHHHHHHcccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcc
ccHHHHHHHHHHccccccccccHHHccccccccccHHHHHHHHHcccHcccccHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHEEEHHcccHHHHHHHHHHHHHHHHHHHcc
MSGARLCALLCElgyggadsldpdsfewpfqyddarpiLDWICsslrpsnvlslSELSQFEQFLQEEKLLEGEDLESAFDSISafssrrddqeavfgseegLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHyhsgdedgiylaysdfhpyllgdsssMKELNQWFSKqldsgpfrlvaeegkskcswvslgdesniLVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSqvasdeayihLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDvqeqgavddrdtfLHGVRDLLNAQaglstyvsapgiVQQISGLRADLTALQSDlenslpgdrnrCINELCTLIQSLQQLLFassttaqpiltprplmkELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISafssrrddqeavfgseeglkDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGkskcswvslGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAAsdvqeqgaVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKneiikhhsqevglqrrVFVDFFCNPERLRSQVRELTARVRALQVS
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVlslselsqfeqflqeekllegeDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAqlqrqlrhlqcqFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
****RLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQF*******************************************************LQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDL************RLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTP**L******MEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLR****************
***ARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELS************************************************E*********************************************************LSARNLQMNDVLGR****************************YLLGDSSSMKELNQWFSK*********************************************QRLRSVFG**********************************************************EEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIE****************************************************************QISGLRADLTAL*************RCINELCTLIQSLQQLLFA*********************************************************RVFVDFFCNPERLRSQVRELTA*V******
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSIS*************GSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
*SGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRA****
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MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKExxxxxxxxxxxxxxxxxxxxxHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query612 2.2.26 [Sep-21-2011]
Q68CZ6603 HAUS augmin-like complex yes no 0.810 0.822 0.224 2e-20
Q6DCY9597 HAUS augmin-like complex N/A no 0.931 0.954 0.229 7e-18
Q8QZX2570 HAUS augmin-like complex yes no 0.767 0.824 0.209 2e-15
>sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1 Back     alignment and function desciption
 Score =  100 bits (250), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 239/548 (43%), Gaps = 52/548 (9%)

Query: 3   GARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQ 62
           G      L ++GY  AD+L+ + F+W F+  +    L W C ++   NVLS  EL  F  
Sbjct: 4   GNEFVETLKKIGYPKADNLNGEDFDWLFEGVEDESFLKWFCGNVNEQNVLSERELEAF-S 62

Query: 63  FLQE--EKLLEGEDLESAFDSISAF---SSRRDDQEAVFGSEEGLKDIREATQAYRDEAA 117
            LQ+  + +LEG  L+ A  +       + R DD+E      E L+D  E     + +  
Sbjct: 63  ILQKSGKPILEGAALDEALKTCKTSDLKTPRLDDKEL-----EKLED--EVQTLLKLKNL 115

Query: 118 QLQRQLRHLQCQF-DMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVL 176
           ++QR+ +   CQ    +T+H S  +  +     AT  +     IL+  ++  + ++  + 
Sbjct: 116 KIQRRNK---CQLMASVTSHKSLRLNAKEEE--ATKKLKQSQGILNAMITKISNELQALT 170

Query: 177 GRIASTAQELAHYH--SGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLV 234
             +        H +   G    ++L+      YL  +  S   L  +  KQ   G   +V
Sbjct: 171 DEVTQLMMFFRHSNLGQGTNPLVFLSQFSLEKYLSQEEQSTAALTLYTKKQFFQGIHEVV 230

Query: 235 AEEGKSKCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQ 294
               +     + +   S   + D ++   +R  E+ RL+  +  ++ Q +  +  N+   
Sbjct: 231 ESSNEDNFQLLDIQTPS---ICDNQEILEERRLEMARLQLAYICAQHQLIHLKASNS--- 284

Query: 295 AILMTLKSQVASDEAYIH------LDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLC 348
               ++KS +   E  +H      +D  +L  K   L  E+  L  +  ++   ++P + 
Sbjct: 285 ----SMKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVV 340

Query: 349 WELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLA 408
            E AQL +  +++GD+DL++ +Q+ Y +RQ+  +N LI Q A  + L+L+  +E R    
Sbjct: 341 RENAQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRD 400

Query: 409 AYSLLKVIESELQGYLSATKSRVGRCLALIEAAS---DVQEQGAVDDRDTFLHGVRDLLN 465
            Y  L+ +  E    LS +   + + L ++   S    +  +  +D +D   H +  +L 
Sbjct: 401 IYRQLENLVQE----LSQSNMMLYKQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLE 456

Query: 466 AQAGLSTYVSAPGIVQQIS-GLRADLTALQSDLENS------LPGDRNRCINELC-TLIQ 517
            +          G +++++  L+ +++ +Q  L  S          RN+ ++ LC TL Q
Sbjct: 457 GENKKKELFLTHGNLEEVAEKLKQNISLVQDQLAVSAQEHSFFLSKRNKDVDMLCDTLYQ 516

Query: 518 SLQQLLFA 525
              QLL +
Sbjct: 517 GGNQLLLS 524




Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.
Homo sapiens (taxid: 9606)
>sp|Q6DCY9|HAUS3_XENLA HAUS augmin-like complex subunit 3 OS=Xenopus laevis GN=haus3 PE=2 SV=1 Back     alignment and function description
>sp|Q8QZX2|HAUS3_MOUSE HAUS augmin-like complex subunit 3 OS=Mus musculus GN=Haus3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
449465240615 PREDICTED: HAUS augmin-like complex subu 0.996 0.991 0.856 0.0
255572632616 conserved hypothetical protein [Ricinus 0.998 0.991 0.857 0.0
356563368618 PREDICTED: HAUS augmin-like complex subu 1.0 0.990 0.809 0.0
79531960617 uncharacterized protein [Arabidopsis tha 0.998 0.990 0.788 0.0
297792035617 hypothetical protein ARALYDRAFT_494914 [ 0.998 0.990 0.785 0.0
224129494661 predicted protein [Populus trichocarpa] 0.988 0.915 0.763 0.0
8777382671 unnamed protein product [Arabidopsis tha 1.0 0.912 0.707 0.0
413943938617 hypothetical protein ZEAMMB73_378778 [Ze 0.996 0.988 0.688 0.0
218197720617 hypothetical protein OsI_21951 [Oryza sa 0.996 0.988 0.685 0.0
357124996617 PREDICTED: HAUS augmin-like complex subu 0.996 0.988 0.683 0.0
>gi|449465240|ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis sativus] Back     alignment and taxonomy information
 Score = 1087 bits (2810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/614 (85%), Positives = 567/614 (92%), Gaps = 4/614 (0%)

Query: 1   MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQF 60
           MSGARLC LL ELGY GA +LDPDSFEWPFQYDDAR ILDWICSSLRPSNVLS SELSQ+
Sbjct: 1   MSGARLCGLLGELGYEGAQALDPDSFEWPFQYDDARSILDWICSSLRPSNVLSHSELSQY 60

Query: 61  EQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQ 120
            QFL+E KLLEGEDL+SA+DSISAFSSRRD+Q+A+FG EEGLK+IREAT AY+ EA QLQ
Sbjct: 61  GQFLEEGKLLEGEDLDSAYDSISAFSSRRDNQDALFGGEEGLKEIREATVAYKSEALQLQ 120

Query: 121 RQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIA 180
           RQL HLQ Q+DMLT+ ASTL QGRRARVAATS+VNG L+ +DD +SARNL+MN VLGRIA
Sbjct: 121 RQLSHLQSQYDMLTSQASTLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGRIA 180

Query: 181 STAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKS 240
           STAQELAHYHSGDEDGIYLAYSDFHPYL+GDSS +KELNQWFSKQLD+GP+RLVAEEGKS
Sbjct: 181 STAQELAHYHSGDEDGIYLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVAEEGKS 240

Query: 241 KCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTL 300
           KCSWVSL D SNILVRDLE SHHQRVSELQRLRS+FGTSERQWVEAQVENAKQQAILM L
Sbjct: 241 KCSWVSLDDMSNILVRDLETSHHQRVSELQRLRSIFGTSERQWVEAQVENAKQQAILMVL 300

Query: 301 KSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYIL 360
           KSQV SDEA+IHLD HSL+RKH ELVGELSNL+ KEEKLLSETIPDLCWELAQLQDTYIL
Sbjct: 301 KSQVTSDEAHIHLDLHSLRRKHSELVGELSNLYDKEEKLLSETIPDLCWELAQLQDTYIL 360

Query: 361 QGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESEL 420
           QGDYDLKVMRQE YI RQK FI+HL+NQLARHQFL++AC +EK+NML AYSLLKVIESEL
Sbjct: 361 QGDYDLKVMRQEFYIDRQKVFISHLVNQLARHQFLKIACQVEKKNMLGAYSLLKVIESEL 420

Query: 421 QGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLL----NAQAGLSTYVSA 476
           Q YLSATK RVGRCLALI+AASDVQEQGAVDDRD+FLHGVRDLL    N QAG+STYVSA
Sbjct: 421 QAYLSATKGRVGRCLALIQAASDVQEQGAVDDRDSFLHGVRDLLSIHSNIQAGVSTYVSA 480

Query: 477 PGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTP 536
           PGI+QQIS L +DL  LQSDLENSLPGDRNRCIN+LC+LIQSLQQLLFASSTTAQP+LTP
Sbjct: 481 PGIIQQISHLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPLLTP 540

Query: 537 RPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLR 596
           R LMKELDEMEKINAKLS AVEEVTLEHCKKNEI+KHHSQEVGLQRRVFVDFFCNPERLR
Sbjct: 541 RALMKELDEMEKINAKLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR 600

Query: 597 SQVRELTARVRALQ 610
           SQVRELTARVRA+Q
Sbjct: 601 SQVRELTARVRAMQ 614




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572632|ref|XP_002527249.1| conserved hypothetical protein [Ricinus communis] gi|223533342|gb|EEF35093.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356563368|ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|79531960|ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] gi|110737416|dbj|BAF00652.1| hypothetical protein [Arabidopsis thaliana] gi|332008298|gb|AED95681.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297792035|ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224129494|ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|8777382|dbj|BAA96972.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|413943938|gb|AFW76587.1| hypothetical protein ZEAMMB73_378778 [Zea mays] Back     alignment and taxonomy information
>gi|218197720|gb|EEC80147.1| hypothetical protein OsI_21951 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|357124996|ref|XP_003564182.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
TAIR|locus:2166071617 AUG3 "AT5G48520" [Arabidopsis 0.998 0.990 0.751 1.8e-245
UNIPROTKB|Q6DCY9597 haus3 "HAUS augmin-like comple 0.699 0.716 0.219 3.8e-21
UNIPROTKB|Q68CZ6603 HAUS3 "HAUS augmin-like comple 0.753 0.764 0.199 3.8e-19
UNIPROTKB|F1NCU4610 HAUS3 "Uncharacterized protein 0.955 0.959 0.188 1.3e-18
UNIPROTKB|F1PDJ8603 HAUS3 "Uncharacterized protein 0.753 0.764 0.195 9.5e-18
UNIPROTKB|B4DF64489 HAUS3 "cDNA FLJ52073" [Homo sa 0.534 0.668 0.195 1.8e-15
UNIPROTKB|F1MNN1601 HAUS3 "Uncharacterized protein 0.941 0.958 0.180 4.2e-15
UNIPROTKB|I3LEU5555 HAUS3 "Uncharacterized protein 0.633 0.699 0.195 1.5e-14
RGD|1591723533 Haus3 "HAUS augmin-like comple 0.766 0.879 0.197 1.5e-13
MGI|MGI:2387633570 Haus3 "HAUS augmin-like comple 0.483 0.519 0.188 1.8e-12
TAIR|locus:2166071 AUG3 "AT5G48520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2365 (837.6 bits), Expect = 1.8e-245, P = 1.8e-245
 Identities = 463/616 (75%), Positives = 523/616 (84%)

Query:     1 MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVXXXXXXXXX 60
             MS ARLC+L+ ELGY GA  LDPDSFEWPFQYDDARPILDWICSSLRPSNV         
Sbjct:     1 MSSARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLY 60

Query:    61 XXXXXXXXXXXXXDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAXXX 120
                          DL+ A+DSISAFSSRR++QEAVFG+EE +K++R+AT A++ EA    
Sbjct:    61 EQFQRDGKLLEGDDLDQAYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQ 120

Query:   121 XXXXXXXXXFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIA 180
                      +D+LT  +S L+QGRRARVAATS V+G ++ ++D LSARNLQMN VLGR+A
Sbjct:   121 RQLRRLQTQYDLLTGQSSALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLA 180

Query:   181 STAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKS 240
             ST+QELAHYHSG+EDGIYLAYSDFH YL GDS+  KELNQWF+KQLD+GP+RLVAEEGKS
Sbjct:   181 STSQELAHYHSGEEDGIYLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEGKS 240

Query:   241 KCSWVSLGDESNILVRDLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTL 300
             KCSWVSL D SN+L RDLEKS HQRV+ELQRLRS+FGTSERQW+EAQVENAKQQAIL+TL
Sbjct:   241 KCSWVSLDDTSNML-RDLEKSQHQRVAELQRLRSIFGTSERQWIEAQVENAKQQAILLTL 299

Query:   301 KSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYIL 360
             KSQV S EA+IH D HSL+RKH +LV E+S L+ KEEKLLSETIP+LCWELAQLQDTYIL
Sbjct:   300 KSQVTSVEAHIHFDLHSLRRKHADLVEEISTLYQKEEKLLSETIPELCWELAQLQDTYIL 359

Query:   361 QGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESEL 420
             QGDYDLKVMRQELYIS+QK FINHL+NQLARHQFL+LAC LEK+NML A+SLLKVIESEL
Sbjct:   360 QGDYDLKVMRQELYISKQKVFINHLVNQLARHQFLKLACQLEKKNMLGAFSLLKVIESEL 419

Query:   421 QGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLL----NAQAGLSTYVSA 476
             QGYLSAT+SRVGRC ALI+AASDVQEQGAVDDRD+FLHGVRDLL    N QAGLSTYVSA
Sbjct:   420 QGYLSATRSRVGRCSALIQAASDVQEQGAVDDRDSFLHGVRDLLSIHSNTQAGLSTYVSA 479

Query:   477 PGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTP 536
             P I+QQI  L++DL++LQSDLENSLP DRNRCINELCT IQ+LQQLLFASSTTAQPILTP
Sbjct:   480 PAIIQQIVALQSDLSSLQSDLENSLPDDRNRCINELCTHIQNLQQLLFASSTTAQPILTP 539

Query:   537 RPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLR 596
              PLMKELDEM KIN+KLS AVEEVTLEH  K EI+KHH+++V LQRRVFVDFFCNPERLR
Sbjct:   540 WPLMKELDEMGKINSKLSTAVEEVTLEHRNKREIVKHHAKDVELQRRVFVDFFCNPERLR 599

Query:   597 SQVRELTARVRALQVS 612
             +QVREL A VRA Q S
Sbjct:   600 NQVRELNALVRARQAS 615




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005819 "spindle" evidence=IDA
GO:0009524 "phragmoplast" evidence=IDA
GO:0080175 "phragmoplast microtubule organization" evidence=IMP
UNIPROTKB|Q6DCY9 haus3 "HAUS augmin-like complex subunit 3" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q68CZ6 HAUS3 "HAUS augmin-like complex subunit 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NCU4 HAUS3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PDJ8 HAUS3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B4DF64 HAUS3 "cDNA FLJ52073" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MNN1 HAUS3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LEU5 HAUS3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1591723 Haus3 "HAUS augmin-like complex, subunit 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2387633 Haus3 "HAUS augmin-like complex, subunit 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 612
PF14932256 HAUS-augmin3: HAUS augmin-like complex subunit 3 100.0
PRK11637428 AmiB activator; Provisional 93.52
PF00038312 Filament: Intermediate filament protein; InterPro: 91.75
PF14932256 HAUS-augmin3: HAUS augmin-like complex subunit 3 88.04
>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3 Back     alignment and domain information
Probab=100.00  E-value=7.8e-56  Score=452.47  Aligned_cols=249  Identities=31%  Similarity=0.419  Sum_probs=226.0

Q ss_pred             ccCCCCCchhHHHHHHccCCCCCCCCHHHHhHHHHHHhcccCCChhhHHHHHhhcccccCCCCchhhhccchhhhhHHHH
Q 007223           28 WPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIRE  107 (612)
Q Consensus        28 Wlf~~~e~~~FL~Wfc~nV~~~NVLS~~EL~~f~~L~~sGkiLeg~~Ld~al~~i~~~~~~~~~~e~~~~~ee~le~l~~  107 (612)
                      |||++|+++|||+|||+||+++||||++|+++|++|+++||||+|+|||+||++|++++.+..++++            .
T Consensus         1 Wlf~~~e~~~FL~W~c~~V~~~NvLS~~El~~~~~L~~~GkiLeg~~Ld~aL~~~~~~~~~~~~~~e------------~   68 (256)
T PF14932_consen    1 WLFDDEEFESFLDWFCSNVNESNVLSEEELQAFEELQKSGKILEGEALDEALKTISAFSPKLLELEE------------E   68 (256)
T ss_pred             CCCCCccHHHHHHHHHccCChhccCCHHHHHHHHHHHHcCCcCCHHHHHHHHHHcccccCCccccch------------H
Confidence            9999999999999999999999999999999999999999999999999999999997666555533            4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHhhhhhHHHHhhhhhhhchhhcchhhhhhhhhhhhHHHHHHHHHHHHHh
Q 007223          108 ATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELA  187 (612)
Q Consensus       108 ~~e~L~~e~~~lqk~~~~l~~~~~~L~~~as~l~~~~~~l~~~~e~~~~~L~~~~~~l~~~n~~~n~~L~~l~~~v~~L~  187 (612)
                      ++++|+++++.++++++..++++|+|+.+++.+++....+....++++..+++.+..+.+.+.++|+.++.+++.|++++
T Consensus        69 ~le~Le~el~~l~~~~~~~~~~~~~lq~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~k~~~~l~~l~~~v~~l~  148 (256)
T PF14932_consen   69 DLEALEEELEALQEYKELYEQLRNKLQQLDSSLSQELSELEGKEEEAQKKLKKAQKELSAECSKLNNELNQLLGEVSKLA  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68888999999999999999999999999999999999999999999999999999999988888888888888888887


Q ss_pred             hc----ccC--CCCccceeccCChhhhhhchhhHHHHHHHHHhhccCCcccccccccCccccccccCccccccch-hhhh
Q 007223          188 HY----HSG--DEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVR-DLEK  260 (612)
Q Consensus       188 ~~----~s~--~~~gvflsq~~le~Yl~~ee~~t~~Lt~y~kKqF~~G~~~~v~~e~~~~~~~~qL~D~~~~~~d-~~e~  260 (612)
                      ++    +++  ++||+|||||||++|+++|++||+|||.||||||++||+++|  |+++.++|+ +.|+++|+++ +.++
T Consensus       149 ~~~~~~~~~~~~~~~~flsq~~l~~Y~~~ee~~t~~L~~y~kKqF~~g~~~~~--e~s~~~~~~-lld~~~~~~~~d~~e  225 (256)
T PF14932_consen  149 SELAHAHSGQQQNPPVFLSQMPLEQYLSQEEQFTKYLTSYTKKQFFQGISELV--ESSNEDNFQ-LLDISNPSIRGDEEE  225 (256)
T ss_pred             HHHHHhcccccCCCCchhhhCCHHHHHHHHHHHHHHHHHHHHHhcccccchhh--ccccchhhH-HhhccccccccchHH
Confidence            54    444  678899999999999999999999999999999999999999  677778877 8889999985 5566


Q ss_pred             hhhhhHHHHHHHHHhHhhHHHHHHHHHHHHH
Q 007223          261 SHHQRVSELQRLRSVFGTSERQWVEAQVENA  291 (612)
Q Consensus       261 ~~e~r~~EL~RLq~~y~~aq~q~I~a~ae~~  291 (612)
                      .+++|+.||+|||++|+||+||||.|+|+++
T Consensus       226 ~~~~~~~EL~rLq~~~~~aq~q~I~~ka~~~  256 (256)
T PF14932_consen  226 VLEERRSELARLQSAYICAQHQLIQAKAEVA  256 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            6666677999999999999999999999863



>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.7 bits (154), Expect = 1e-10
 Identities = 77/580 (13%), Positives = 157/580 (27%), Gaps = 158/580 (27%)

Query: 5   RLCALLCELGYGGA-----DSLDPDSFEW---PFQYDDARPILDWIC------------S 44
           RL   L             + L  + +++   P + +  +P +                 
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 45  SLRPSNVLSLSELSQFEQFLQEEK-----LLEG----------------EDLESAFDS-- 81
                NV  L    +  Q L E +     L++G                  ++   D   
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 82  --ISAFSSRRDD------QEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDML 133
             ++  +    +      Q+ ++  +       + +   +     +Q +LR L       
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS---- 240

Query: 134 TAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGD 193
                                   L +L +  +A+     ++  +I  T +         
Sbjct: 241 -------KPYENC-----------LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282

Query: 194 EDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDS--------GPFR--LVAEEGKS-KC 242
                    D H   L        L ++   +            P R  ++AE  +    
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 243 SW-----VSLGDESNILVRDLEKSHHQRVSELQRL---RSVF--------GTSERQWVEA 286
           +W     V+    + I+   L        +E +++    SVF              W + 
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLN---VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399

Query: 287 QVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNL--HHKEEKLLSETI 344
              +       +   S V        +   S+   ++EL  +L N    H+   ++    
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELKVKLENEYALHR--SIVDHYN 454

Query: 345 PDLCWELAQL----QDTYILQ--GDYDLKVMRQ-ELYISRQKAFIN-HLINQLARHQFLR 396
               ++   L     D Y     G + LK +   E     +  F++   + Q  RH    
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIG-HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 397 LACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTF 456
                   N L           +L+ Y    K  +          +D + +  V+    F
Sbjct: 514 WNASGSILNTL----------QQLKFY----KPYICD--------NDPKYERLVNAILDF 551

Query: 457 LHGV---------RDLLNAQAGLST-----YVSAPGIVQQ 482
           L  +          DLL  +  L       +  A   VQ+
Sbjct: 552 LPKIEENLICSKYTDLL--RIALMAEDEAIFEEAHKQVQR 589


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00