Citrus Sinensis ID: 007292

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------61

MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKCSSI

cccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHEEEEEccccc

ccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHEEEEEEEHHHHHHHHHHHHHHHHHccccHHHcccccccccccHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHEHHcHHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccc

MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEakdslgddkELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAegggvmaaisnprrsakksttatissnshtQQKLKVqgkgykdkCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIydyvapcfpprYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDnliglgvdeSLAQVCsesgamdplmNSYVERMQATTKKWYLNILdadkvqppkrtedgklytpAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERerlaepapeiglePLCAMINNNLRCYDLAMELStstmealppnyaeqvNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLdckyyksnpyicLNFWVKLIKCSSI

mmsedlgvEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAeakdslgddkELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSttatissnshtqqklkvqgkgykdKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKCSSI

MMSEDLGveakeaavrevakLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLaeeaaeaegggVMAAISNPRRsakksttatissnsHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQaaererlaepapeIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQkgksllksftsflflDCKYYKSNPYICLNFWVKLIKCSSI

**************VREVAKLLTLPDQLQFIGDMKADYIA***************************ALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNL*****************************LINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEIL**************************************************GYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLA*********************ATTKKWYLNILDADK*********GKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKC***

************AAVREVAKLLTLPDQLQFIGD**********************************ALSEQMISQLRENFISIERYC********NHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALA**********RLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQL***************************************KLKVQGKGYKDKCYEQIRKAVERRFNK********DLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIG**************GAMDPLMNSYVERMQATTKKWYLNILDA*********EDGKLYTPAAVDLFRILGEQVQ******TDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMEL*********************CKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKCSSI

*********AKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFAL*********VGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISN*****************************YKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKCSSI

*MSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKSLLKSFTSFLFLDCKYYKSNPYICLNFWVKLIKCSSI

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		609	2.2.26 [Sep-21-2011]
Q54BP6		783	Exocyst complex component	yes	no	0.888	0.690	0.238	7e-41
Q19262		796	Exocyst complex component	yes	no	0.709	0.542	0.225	2e-17
Q0V8C2		745	Exocyst complex component	yes	no	0.712	0.582	0.200	4e-14
Q9V8K2		738	Exocyst complex component	yes	no	0.717	0.592	0.211	2e-13
Q62825		755	Exocyst complex component	yes	no	0.852	0.687	0.203	6e-13
Q6KAR6		755	Exocyst complex component	yes	no	0.707	0.570	0.192	2e-12
O60645		756	Exocyst complex component	yes	no	0.706	0.568	0.203	3e-12
A2AV37		780	Exocyst complex component	yes	no	0.696	0.543	0.193	7e-12
Q86VI1		746	Exocyst complex component	no	no	0.617	0.504	0.217	1e-08
O74846		752	Exocyst complex component	yes	no	0.835	0.676	0.189	2e-07

>sp\|Q54BP6\|EXOC3_DICDI Exocyst complex component 3 OS=Dictyostelium discoideum GN=exoc3 PE=3 SV=1	Back alignment and function desciption

 Score =  169 bits (428), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 271/584 (46%), Gaps = 43/584 (7%)

Query: 10  AKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLAL 69
           A+ AA++++ +  +  D L  + + K   I +++  ++Q+   V  ++E+++ GLE+L  
Sbjct: 17  AQSAAIKKIEQNFSNIDSLASVTNHKISLIQQKKTIEAQIKNEVHSELEKSKKGLETLYK 76

Query: 70  SEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAA 129
           S   I+++ E+F      C E   LI ++  IK ++  R NL   LK+V+ +++I  +AA
Sbjct: 77  SYNRINRMDESFSDTVELCSETSNLIGHYQLIKKVNTVRVNLINILKEVDRLLTIPEKAA 136

Query: 130 EAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKT 189
           E +  L DD  L+  + +L  L+   + AL   ES+ EE+  ++E F  V ++   FE  
Sbjct: 137 EIEQLLSDDLNLLEIHSKLRELERLHQKALKQFESNFEELEAIKEMFSSVPELSHRFENK 196

Query: 190 LWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAK 249
           +W  +SN   +++  P  LV+  +++E +++ +Q+  E+ ++     ++++         
Sbjct: 197 IWNIVSNSIDIAQIKPAVLVKVAQIIEREKLHEQKQKEKKSQ---NSLISSEGIHDDDDD 253

Query: 250 KSTTATISSNS----------HTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELV-- 297
              T    +NS           +           +D+ Y++ R     RF ++L + +  
Sbjct: 254 DDDTEVNLNNSNKQQNNENENSSSNNNNNYDINNEDEGYDRNRSNYGDRFLEVLIQSISG 313

Query: 298 -FE--------DLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQML 348
            FE        DL   L++   + +EL  + D V  C+PP Y++F   V+ Y  +F  + 
Sbjct: 314 KFEPMFLNSHNDLVQTLKDVNKMVDELFIVMDIVQECYPPSYDLFNFYVDQYHTKFYSLF 373

Query: 349 RLLSDR--------------ANELTNIEILKVTGWVVE-YQDNLIGLGVDESLAQVCSES 393
              S+                  + +  IL +  WVV+ Y  +L  LG+ +    +    
Sbjct: 374 GSFSNLMESSHVNNNYQVVVTKNIPSAHILMLVEWVVKNYSRDLSRLGIQDISPPLL--- 430

Query: 394 GAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQI 453
            ++DPL+  Y   ++   ++W  NI++ D    P+   DG+  + A + LF  +  Q+ I
Sbjct: 431 DSLDPLIKIYKMHIKQLMREWCDNIINNDNQNKPEVV-DGQYCSLAPIQLFESVASQLDI 489

Query: 454 VRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAME 513
                   ++  +   ++  ++ FQ      L E   EI LE + A +NNN +CYD    
Sbjct: 490 AAATKCQKLVVGVMEEVVSALMYFQVQSITLLQERNHEIKLENVIAYVNNNSKCYDHTQT 549

Query: 514 LSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFED 557
           +       L   +   ++F+   +GFL V+K A +   +VIF D
Sbjct: 550 IVDKVSNILDSEHMGYLDFDPVLEGFLNVSKVATQAISSVIFRD 593

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Dictyostelium discoideum (taxid: 44689)

>sp\|Q19262\|EXOC3_CAEEL Exocyst complex component 3 OS=Caenorhabditis elegans GN=sec-6 PE=3 SV=2	Back alignment and function description

>sp\|Q0V8C2\|EXOC3_BOVIN Exocyst complex component 3 OS=Bos taurus GN=EXOC3 PE=2 SV=1	Back alignment and function description

>sp\|Q9V8K2\|EXOC3_DROME Exocyst complex component 3 OS=Drosophila melanogaster GN=sec6 PE=2 SV=2	Back alignment and function description

>sp\|Q62825\|EXOC3_RAT Exocyst complex component 3 OS=Rattus norvegicus GN=Exoc3 PE=1 SV=1	Back alignment and function description

>sp\|Q6KAR6\|EXOC3_MOUSE Exocyst complex component 3 OS=Mus musculus GN=Exoc3 PE=1 SV=2	Back alignment and function description

>sp\|O60645\|EXOC3_HUMAN Exocyst complex component 3 OS=Homo sapiens GN=EXOC3 PE=1 SV=2	Back alignment and function description

>sp\|A2AV37\|EX3L1_DANRE Exocyst complex component 3-like protein OS=Danio rerio GN=exoc3l1 PE=2 SV=1	Back alignment and function description

>sp\|Q86VI1\|EX3L1_HUMAN Exocyst complex component 3-like protein OS=Homo sapiens GN=EXOC3L1 PE=2 SV=2	Back alignment and function description

>sp\|O74846\|SEC6_SCHPO Exocyst complex component sec6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec6 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		609
224146468		758	predicted protein [Populus trichocarpa]	0.965	0.775	0.844	0.0
225429246		756	PREDICTED: exocyst complex component 3 [	0.965	0.777	0.848	0.0
359486028		756	PREDICTED: exocyst complex component 3-l	0.965	0.777	0.848	0.0
357469701		755	Exocyst complex subunit SEC6 [Medicago t	0.963	0.777	0.820	0.0
356506130		756	PREDICTED: exocyst complex component 3-l	0.965	0.777	0.833	0.0
255572385		756	exocyst complex component sec6, putative	0.960	0.773	0.848	0.0
356496372		756	PREDICTED: exocyst complex component 3-l	0.965	0.777	0.827	0.0
449446355		756	PREDICTED: exocyst complex component 3-l	0.965	0.777	0.848	0.0
224135427		749	predicted protein [Populus trichocarpa]	0.950	0.773	0.814	0.0
18409922		752	protein SEC6 [Arabidopsis thaliana] gi\|1	0.958	0.776	0.822	0.0

>gi\|224146468\|ref\|XP_002326016.1\| predicted protein [Populus trichocarpa] gi\|222862891\|gb\|EEF00398.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1016 bits (2626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/598 (84%), Positives = 548/598 (91%), Gaps = 10/598 (1%)

Query: 1   MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQA 60
           MM+EDLG+EAKE AVREVAKLL LP+ LQ I  +KADYIARQQAND+QLSTMVAEQ+EQA
Sbjct: 1   MMAEDLGIEAKETAVREVAKLLPLPELLQSIASIKADYIARQQANDAQLSTMVAEQVEQA 60

Query: 61  QTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEG 120
           Q+GLESLALS++ ISQLRENFISIE+ CQECQTLIENHDQIKLLSNARNNL+TTLKDVEG
Sbjct: 61  QSGLESLALSQKTISQLRENFISIEKLCQECQTLIENHDQIKLLSNARNNLNTTLKDVEG 120

Query: 121 MMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVD 180
           MMSISVEAAEA+DSL DD+E++NTYERLTALDGKRRFALAAA SHKEEVGRLREYFEDVD
Sbjct: 121 MMSISVEAAEARDSLSDDREIVNTYERLTALDGKRRFALAAAGSHKEEVGRLREYFEDVD 180

Query: 181 QIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAA 240
           Q WETFEKTLWG++SNF+KLSKESPQTLVRALRVVEMQEILD+Q+AEEAAEAEGGG MA 
Sbjct: 181 QTWETFEKTLWGHVSNFFKLSKESPQTLVRALRVVEMQEILDEQVAEEAAEAEGGGAMAT 240

Query: 241 ISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFED 300
           ++NPRRSAKKSTT  +SS +  QQKLK+QGKG+KDKCYE IRKAVE RFNKLLTELVFED
Sbjct: 241 VANPRRSAKKSTTTAVSSKNPMQQKLKIQGKGFKDKCYESIRKAVEGRFNKLLTELVFED 300

Query: 301 LKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTN 360
           LKAALEEARTIGEEL DIYDYVAPCFPPRYEIFQLMVNLYTERF QMLRLLSDRANEL+N
Sbjct: 301 LKAALEEARTIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFTQMLRLLSDRANELSN 360

Query: 361 IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILD 420
           IEILKVTGWVVEYQDNL+GLGVDESLAQVCSESGAMDPLMNSYVERMQATT+KWYLNIL+
Sbjct: 361 IEILKVTGWVVEYQDNLVGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILE 420

Query: 421 ADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQ--VMIDFQ 478
           ADKVQPPK+T+DGKLYTPAAVDLFRILGEQVQIVR+NSTD+MLYRI+LAIIQ  VMIDFQ
Sbjct: 421 ADKVQPPKKTDDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQASVMIDFQ 480

Query: 479 AAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKG 538
           AAER+RL EPA EIGLEPLCAMINNNLRCYDLAMELS STMEALP NYAEQVNFED CKG
Sbjct: 481 AAERKRLEEPASEIGLEPLCAMINNNLRCYDLAMELSNSTMEALPQNYAEQVNFEDTCKG 540

Query: 539 FLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKS-------LLKSFTSFLFLDCKYY 589
           FLEV KEAV  T+ VIFEDPGV++L+VKLY K  S       L+ +F  + F D K Y
Sbjct: 541 FLEVAKEAVHQTVRVIFEDPGVQELIVKLYHKEWSEGQVTEYLVATFGDY-FTDVKMY 597

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225429246\|ref\|XP_002264732.1\| PREDICTED: exocyst complex component 3 [Vitis vinifera] gi\|296088092\|emb\|CBI35451.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359486028\|ref\|XP_002268285.2\| PREDICTED: exocyst complex component 3-like [Vitis vinifera] gi\|298204486\|emb\|CBI23761.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357469701\|ref\|XP_003605135.1\| Exocyst complex subunit SEC6 [Medicago truncatula] gi\|355506190\|gb\|AES87332.1\| Exocyst complex subunit SEC6 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356506130\|ref\|XP_003521840.1\| PREDICTED: exocyst complex component 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|255572385\|ref\|XP_002527131.1\| exocyst complex component sec6, putative [Ricinus communis] gi\|223533554\|gb\|EEF35294.1\| exocyst complex component sec6, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356496372\|ref\|XP_003517042.1\| PREDICTED: exocyst complex component 3-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|449446355\|ref\|XP_004140937.1\| PREDICTED: exocyst complex component 3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224135427\|ref\|XP_002327215.1\| predicted protein [Populus trichocarpa] gi\|222835585\|gb\|EEE74020.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|18409922\|ref\|NP_565026.1\| protein SEC6 [Arabidopsis thaliana] gi\|15028129\|gb\|AAK76688.1\| unknown protein [Arabidopsis thaliana] gi\|22136818\|gb\|AAM91753.1\| unknown protein [Arabidopsis thaliana] gi\|332197115\|gb\|AEE35236.1\| protein SEC6 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		609
DICTYBASE\|DDB_G0293520		783	exoc3 "exocyst complex subunit	0.326	0.254	0.281	8.9e-42
ASPGD\|ASPL0000042482		759	AN1988 [Emericella nidulans (t	0.706	0.566	0.225	6.1e-18
UNIPROTKB\|G4N9X0		755	MGG_03235 "Uncharacterized pro	0.668	0.539	0.235	2.8e-17
UNIPROTKB\|F1NHD9		745	EXOC3 "Uncharacterized protein	0.331	0.271	0.189	4.8e-17
UNIPROTKB\|Q0V8C2		745	EXOC3 "Exocyst complex compone	0.334	0.273	0.237	2.8e-15
FB\|FBgn0034367		738	sec6 "sec6" [Drosophila melano	0.330	0.272	0.225	7e-15
RGD\|621790		755	Exoc3 "exocyst complex compone	0.338	0.272	0.221	4.4e-14
WB\|WBGene00017284		796	sec-6 [Caenorhabditis elegans	0.689	0.527	0.213	4.6e-14
MGI\|MGI:2443972		755	Exoc3 "exocyst complex compone	0.334	0.270	0.224	5.7e-14
UNIPROTKB\|O60645		756	EXOC3 "Exocyst complex compone	0.334	0.269	0.224	7.2e-14

DICTYBASE\|DDB_G0293520 exoc3 "exocyst complex subunit 3" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

 Score = 263 (97.6 bits), Expect = 8.9e-42, Sum P(2) = 8.9e-42
 Identities = 56/199 (28%), Positives = 110/199 (55%)

Query:    26 DQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIE 85
             D L  + + K   I +++  ++Q+   V  ++E+++ GLE+L  S   I+++ E+F    
Sbjct:    33 DSLASVTNHKISLIQQKKTIEAQIKNEVHSELEKSKKGLETLYKSYNRINRMDESFSDTV 92

Query:    86 RYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTY 145
               C E   LI ++  IK ++  R NL   LK+V+ +++I  +AAE +  L DD  L+  +
Sbjct:    93 ELCSETSNLIGHYQLIKKVNTVRVNLINILKEVDRLLTIPEKAAEIEQLLSDDLNLLEIH 152

Query:   146 ERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESP 205
              +L  L+   + AL   ES+ EE+  ++E F  V ++   FE  +W  +SN   +++  P
Sbjct:   153 SKLRELERLHQKALKQFESNFEELEAIKEMFSSVPELSHRFENKIWNIVSNSIDIAQIKP 212

Query:   206 QTLVRALRVVEMQEILDQQ 224
               LV+  +++E +++ +Q+
Sbjct:   213 AVLVKVAQIIEREKLHEQK 231

GO:0006887 "exocytosis" evidence=IEA

GO:0000145 "exocyst" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

ASPGD\|ASPL0000042482 AN1988 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N9X0 MGG_03235 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NHD9 EXOC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0V8C2 EXOC3 "Exocyst complex component 3" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

FB\|FBgn0034367 sec6 "sec6" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

RGD\|621790 Exoc3 "exocyst complex component 3" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

WB\|WBGene00017284 sec-6 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

MGI\|MGI:2443972 Exoc3 "exocyst complex component 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|O60645 EXOC3 "Exocyst complex component 3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_XIX0238	hypothetical protein (758 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		609
pfam06046		557	pfam06046, Sec6, Exocyst complex component Sec6	6e-80
COG5173		742	COG5173, SEC6, Exocyst complex subunit SEC6 [Intra	3e-20

>gnl\|CDD\|218871 pfam06046, Sec6, Exocyst complex component Sec6	Back alignment and domain information

 Score =  262 bits (671), Expect = 6e-80
 Identities = 115/411 (27%), Positives = 185/411 (45%), Gaps = 44/411 (10%)

Query: 176 FEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGG 235
           F  +D + E F+K LW  I N  +L +E P+ LVRALR+VE +E  D++        +  
Sbjct: 1   FSKLDGLIEKFDKLLWEIIRNLIELVREGPELLVRALRIVEREEKEDEKAEALQEATKDE 60

Query: 236 GVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTE 295
               A     R                        +GYKDK  + + ++VE RF +    
Sbjct: 61  NNDDAGRFRGRP-----------------------RGYKDKFLDALEESVEERFEECRER 97

Query: 296 LV-FEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDR 354
            +   DL   LE  R + E+L  + D +AP FPP Y IF+  VN+Y       L+ L+D 
Sbjct: 98  FLGDPDLVQVLENLRWVFEDLIVVKDLLAPLFPPHYNIFKTYVNIYHNALHDFLQELAD- 156

Query: 355 ANELTNIEILKVTGWVVEYQDNLIGLGVD---ESLAQVCSESGAMDPLMNSYVERMQATT 411
             EL   +IL +  W   Y   +  LG+      L  +  +    + L + Y+  +    
Sbjct: 157 -PELEAEDILAILSWDNTYYSFMGKLGLAPDKSDLEPLLLDEL-KEELEDDYLSLIVNKV 214

Query: 412 KKWYLNILDADKV-----QPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRI 466
           ++W  N+L+ +K      QPP   EDG  +TP  VD+F+++ EQ+ +  E+    +L  +
Sbjct: 215 REWMDNLLETEKKEFVAEQPPDIDEDGYYHTPLPVDVFQMIEEQLDVAAESLQAKILVGV 274

Query: 467 ALAIIQVMIDFQAAERERLAEPA-----PEIGLEPLCAMINNNLRCYDLAMELSTSTMEA 521
              + + +   Q A  E L E           +E L A+ N+ L+C D A  L    +  
Sbjct: 275 LEELSKFLRSRQDAWIELLEEELRKYMSVPGLVEYLIALANDQLKCADYASSLLQKYLPK 334

Query: 522 LPPNYAE--QVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQK 570
           +   Y E     FE+   GF++++KE +   L +IF D  ++  L KL+ K
Sbjct: 335 VSSKYEERITEEFEELLDGFVDLSKECISLLLELIFND--LQPALSKLFTK 383

Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner. Length = 557

>gnl\|CDD\|227500 COG5173, SEC6, Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		609
COG5173		742	SEC6 Exocyst complex subunit SEC6 [Intracellular t	100.0
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	100.0
KOG2286		667	consensus Exocyst complex subunit SEC6 [Intracellu	100.0
KOG2180		793	consensus Late Golgi protein sorting complex, subu	100.0
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	100.0
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	98.79
KOG0412		773	consensus Golgi transport complex COD1 protein [In	98.39
PF05664		677	DUF810: Protein of unknown function (DUF810); Inte	97.95
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	97.02
KOG2176		800	consensus Exocyst complex, subunit SEC15 [Intracel	96.92
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	96.87
PF10475		291	DUF2450: Protein of unknown function N-terminal do	96.86
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	95.46
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	94.15
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	93.07
PF15469		182	Sec5: Exocyst complex component Sec5	93.06
PF07393		710	Sec10: Exocyst complex component Sec10; InterPro:	92.36
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	92.34
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	91.38
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	90.35
KOG2115		951	consensus Vacuolar sorting protein VPS45 [Intracel	90.05
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	89.66
KOG3958		371	consensus Putative dynamitin [Cytoskeleton]	87.93
smart00762		324	Cog4 COG4 transport protein. This region is found	81.71

>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

Probab=100.00  E-value=4.8e-69  Score=551.13  Aligned_cols=557  Identities=16%  Similarity=0.209  Sum_probs=476.6

Q ss_pred             HHHHHHHHhhcCCCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007292           12 EAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQEC   91 (609)
Q Consensus        12 ~~a~~~v~~ll~~p~~L~kl~~l~~~~~~~k~s~~~qLk~~v~~ql~~~~~gl~~L~~a~~~v~~l~~~~~~i~~~~~~~   91 (609)
                      +.|+.++.+.+++|.+|.++..+++++.+     ..+|.+.....-..+..   .|....+....+.....++.++|.+.
T Consensus         2 ~~~l~q~~~~~~~d~~l~~v~Di~eq~~k-----f~~l~~h~~~~~~e~~~---~ln~~~n~~~~i~~~~~e~~~l~e~~   73 (742)
T COG5173           2 DKALTQLSETLRHDSDLQTVLDIIEQSTK-----FEALEHHDGNLSAEISK---CLNNILNISKRIYGLEEELKSLVEGK   73 (742)
T ss_pred             ChHHHHHHHHhcCchHHHHHHHHHHHHHH-----HHHHHhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            36899999999999999999999999988     23333332221111221   46667788888899999999999999


Q ss_pred             HHHHHchHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHhhhc-------CChhHHHHHHHHHHHHhHHHHHHHHH-h
Q 007292           92 QTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLG-------DDKELINTYERLTALDGKRRFALAAA-E  163 (609)
Q Consensus        92 ~~~v~~~~~Ik~l~~~~~nl~~t~~~l~~l~~~~~~~~~~~~~l~-------~~~~LL~ah~~L~~Le~~rd~~l~~~-~  163 (609)
                      +.+|..|+.+-++...++|..+|..+..+|..+.+..+..+++++       ++||||.+|+.|+.+++||.++..++ .
T Consensus        74 r~~V~~~~~~fr~~k~Y~sv~~t~~~~s~l~n~V~~~d~ied~l~~~l~eD~dmPnLl~~H~kl~~ardF~eq~~~~a~e  153 (742)
T COG5173          74 RRNVRVLKGFFRLVKDYRSVKMTCLAHSNLCNVVEFSDRIEDILGTVLTEDIDMPNLLAYHTKLYDARDFGEQLDMYATE  153 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHccHHHHhHHHHHHHhh
Confidence            999999999999999999999999999999888888888888874       45999999999999999999777665 4


Q ss_pred             hchHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhcCC-chhhHHHHHHHhhhhhhHHHHHHHHHhhcCccccccc
Q 007292          164 SHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESP-QTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAIS  242 (609)
Q Consensus       164 ~~~~d~~~L~~~F~~v~~l~~~f~~~l~~i~~~~l~~~~~~~-~~lv~~~rIie~EE~~D~~~~~~~~~~~~~~~~~~~~  242 (609)
                      .+.|+..++.+.|+.++.++..|++.|..+..++++.|+.+. ...+++++|+|.||++|+....            +++
T Consensus       154 ~~~D~~~tv~k~fs~l~~~s~~Fd~lvl~~~~~iie~vksghi~~~~~ifkIve~EE~~De~~~~------------Ird  221 (742)
T COG5173         154 ISHDDYVTVNKAFSTLEKNSLDFDALVLEISEEIIENVKSGHIEAMDKIFKIVEKEEARDELTRK------------IRD  221 (742)
T ss_pred             cccccHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHH------------HHH
Confidence            677788999999999999999999999999999999999975 6889999999999999998753            111


Q ss_pred             Cccccccccccc-ccccccchhhccccCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 007292          243 NPRRSAKKSTTA-TISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDY  321 (609)
Q Consensus       243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~k~~~~~~i~~sv~~~~~~~~~~~~~~d~~~~Ld~~~~~~~dL~~v~~~  321 (609)
                      +.+.+-+.+..+ .+...+-.......+||+||++....|..|+.+.|.+.+.++.+++  ..++++.|+++||..++.+
T Consensus       222 aks~lp~SQD~P~~~~~~gmyr~~~~~~~r~lk~f~i~~i~~sv~e~F~r~r~~yi~d~--sgelnmDfIf~dL~~i~e~  299 (742)
T COG5173         222 AKSELPKSQDNPVLKEFYGMYRMYATRKTRKLKDFVIKSIEVSVKEKFDRLRNEYIFDN--SGELNMDFIFKDLSFIREN  299 (742)
T ss_pred             HHhcCCCcCCCcchHHHHHHHHHHHhhhhhhHHHHHhhhhHHHHHHHHHHHHHHHHhcC--cchhhhHHHHHHHHHHHHH
Confidence            111110111111 1111111233445789999999999999999999999988777643  3355666999999999999


Q ss_pred             ccccccccccHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHhchhHHhHHhHh-cCCCCccccccCCCcCchhHHH
Q 007292          322 VAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLI-GLGVDESLAQVCSESGAMDPLM  400 (609)
Q Consensus       322 ~~~~FPp~~~I~~~~~~~yh~~l~~~L~~l~~~~~~l~~~~ll~lL~wv~~Y~~~l~-~l~~~~~~l~~ll~~~~~~~L~  400 (609)
                      ++.||||+|||+.+|...|.+++...+...+  ..++++..+|.++.|+.+|++.++ +||+..++++|.++++.-+.|.
T Consensus       300 i~~~~pp~~NI~~~y~~~YqecL~~L~td~v--~~~~~a~~iL~ii~f~~~y~~t~e~~f~f~~dev~~~l~d~e~g~L~  377 (742)
T COG5173         300 ISLSFPPFDNILTLYHNNYQECLLKLFTDEV--TERLDAGEILAIIEFVGNYYNTIESKFNFIADEVGGRLLDNETGELL  377 (742)
T ss_pred             ccccCCchHHHHHHHHHHHHHHHHHHHHHHh--hcCCcchHHHHHHHHHHHHHHHHHHhCCccHHHhcccccCCcchHHH
Confidence            9999999999999999999999999999987  678999999999999999999998 8999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh------hcCCCCCCCCCccccCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 007292          401 NSYVERMQATTKKWYLNILDAD------KVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVM  474 (609)
Q Consensus       401 ~~Yl~~~~~~~~ew~~~~l~~e------r~~~Pe~d~dG~~~t~~~vdlfqmi~qql~~a~~~~~~~~~~~v~~~~~~~l  474 (609)
                      .+|+++++.+++||..|+.+.|      |+.||+.|+||.|+++|.+.+||||.||+.+++...+...+.-|+..++..|
T Consensus       378 ~~Yt~l~~~Kl~EWv~nl~~~evd~F~~R~~ep~~Dsdg~l~l~Gt~~~fQmitqQ~e~ia~tn~sdvvgiV~~~i~~~~  457 (742)
T COG5173         378 EKYTKLAQEKLKEWVMNLTRIEVDKFYARNEEPSRDSDGKLVLPGTVSLFQMITQQLEPIAFTNRSDVVGIVFAHITRTI  457 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCCCcCccCccHHHHHHHHHHHhhhhhcCCccchhhhhHHHHHHHH
Confidence            9999999999999999998877      6789999999999999999999999999999999998888877888999999


Q ss_pred             HHHHHHHHHHhcC-----------CC-CCCchhHHHHHhhhhhhhHHHHHHHHHHhcccCCccccccc--chhHHhhhHH
Q 007292          475 IDFQAAERERLAE-----------PA-PEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQV--NFEDACKGFL  540 (609)
Q Consensus       475 ~~f~~~y~~~l~~-----------~~-~~~~~e~liA~~N~~~~~~e~~~~l~~~~~~~v~~~~~~~i--~~~~~~~~f~  540 (609)
                      .+++..|+..+.+           +. +++.++|++|+.||+++|++|+..+..+.-+.++++|.+++  .++...|||.
T Consensus       458 tk~q~~wks~l~ee~~kq~~~npEs~~p~Gl~eyliav~Nd~lK~A~y~~~~~sntfeLitseye~d~~~~lgkTvDgfi  537 (742)
T COG5173         458 TKYQEIWKSNLVEEMDKQFKSNPESSSPAGLEEYLIAVGNDGLKIAQYITSLPSNTFELITSEYENDEVKELGKTVDGFI  537 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCccCCcchHHHHHHHHcCCcchHHHHHHhcchhhhhhhhHHHHHHHHHHhcccchhHH
Confidence            9999999876521           12 33779999999999999999999999999899999986654  4778889999


Q ss_pred             HHHHHHHHHHHHHHhcCccchHHhhhhcCCCce-------eeeecccccccccccccccccc
Q 007292          541 EVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKS-------LLKSFTSFLFLDCKYYKSNPYI  595 (609)
Q Consensus       541 ~l~~~a~~~L~~~i~~d~~l~p~~~~lft~~W~-------i~~Ti~dY~~~D~~~~~~~~~~  595 (609)
                      ++++.+...|+..|+.|  |+|++.++|+++||       |+.|++|| +.||+.+|+|+.|
T Consensus       538 ~I~~~s~~~l~~~i~~d--~~pa~~~iF~~~Wy~gS~~k~IvdTl~dy-l~D~~~~M~~~lF  596 (742)
T COG5173         538 DILKASNTFLAEFIIYD--CQPAIDKIFTDEWYGGSVTKVIVDTLQDY-LSDYQNTMSEYLF  596 (742)
T ss_pred             HHHhhhhHHHHHHHHHh--hhhhHHHhcCccccccchHHHHHHHHHHH-HHHHHHhcccHHH
Confidence            99999999999999999  99999999999997       99999999 9999999998775

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG3958 consensus Putative dynamitin [Cytoskeleton]	Back alignment and domain information

>smart00762 Cog4 COG4 transport protein	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		609
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	4e-26
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	2e-04

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 399	Back alignment and structure

 Score =  109 bits (274), Expect = 4e-26
 Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 33/205 (16%)

Query: 397 DPLMNSYVERMQATTKKWYLNILDADK------VQPPKRTEDGKLYTPAAVDLFRILGEQ 450
           + L   Y+  +     +W  N+  A+         PP    DG L+       F++  +Q
Sbjct: 10  ETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQ 69

Query: 451 VQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAE----------------------- 487
           V++    +   +L  +      ++   Q     +++E                       
Sbjct: 70  VEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPED 129

Query: 488 PAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQV--NFEDACKGFLEVTKE 545
             P   +E L A+ N+ ++  D A+ +S+   + +   Y +Q+  + E    GF EV + 
Sbjct: 130 ECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQC 189

Query: 546 AVRHTLNVIFEDPGVEQLLVKLYQK 570
           +    + ++F+D  + +   +++ K
Sbjct: 190 SSLGLITLMFDD--LRKPYQEIFSK 212

PyMOL of 2fji

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		609
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	100.0
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	97.64

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

Probab=100.00  E-value=1.7e-33  Score=300.78  Aligned_cols=205  Identities=18%  Similarity=0.331  Sum_probs=189.7

Q ss_pred             ccCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCCCCCCCCccccCchhHHHHHHHHHHHHHHhhhhhH
Q 007292          388 QVCSESGAMDPLMNSYVERMQATTKKWYLNILDAD------KVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDI  461 (609)
Q Consensus       388 ~~ll~~~~~~~L~~~Yl~~~~~~~~ew~~~~l~~e------r~~~Pe~d~dG~~~t~~~vdlfqmi~qql~~a~~~~~~~  461 (609)
                      +|+|+++.++.|+++|+++++++|++|+.|+++.|      |+.+|+.|.+|+|+|++|+|+|+||++|+++|..++.+.
T Consensus         1 ~~ll~~~~~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~t~~~~dvfqml~eql~~a~~~~~~~   80 (399)
T 2fji_1            1 GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAK   80 (399)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEECHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCeeCCchHHHHHHHHHHHHHHHhCCCcc
Confidence            57888899999999999999999999999999999      778999999999999999999999999999999999996


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC-----------------------CCCCCchhHHHHHhhhhhhhHHHHHHHHHHh
Q 007292          462 MLYRIALAIIQVMIDFQAAERERLAE-----------------------PAPEIGLEPLCAMINNNLRCYDLAMELSTST  518 (609)
Q Consensus       462 ~~~~v~~~~~~~l~~f~~~y~~~l~~-----------------------~~~~~~~e~liA~~N~~~~~~e~~~~l~~~~  518 (609)
                      ...+|+..|+..|..|+..|++.+.+                       ..++++++|+||++|||.+|.++++++..++
T Consensus        81 l~~~v~~~~~~~L~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~liA~~Nn~~~~~e~~~~l~~~~  160 (399)
T 2fji_1           81 ILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKY  160 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCCTTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccccccHHHhhhhhhccHHHHHHHHHHHHHHH
Confidence            77699999999999999999876511                       1235678999999999999999999999999


Q ss_pred             cccCCccccccc--chhHHhhhHHHHHHHHHHHHHHHHhcCccchHHhhhhcCCCce-------eeeecccccccccccc
Q 007292          519 MEALPPNYAEQV--NFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKGKS-------LLKSFTSFLFLDCKYY  589 (609)
Q Consensus       519 ~~~v~~~~~~~i--~~~~~~~~f~~l~~~a~~~L~~~i~~d~~l~p~~~~lft~~W~-------i~~Ti~dY~~~D~~~~  589 (609)
                      .+.+++.+.+++  +++.+.++|.+++++|++.|++.||.|  |+|+|++|||++||       |+.|++|| +.||+.+
T Consensus       161 ~~~~~~~~~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~d--l~p~~~~lft~~W~~~~~v~~i~~ti~dy-~~d~~~~  237 (399)
T 2fji_1          161 GKLVSKVYEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEY-LLDIKPQ  237 (399)
T ss_dssp             HTTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT--THHHHTTTTSGGGTTCCHHHHHHHHHHHH-HHHHGGG
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchhcCCcHHHHHHHHHHHH-HHHHHHH
Confidence            999999998766  688999999999999999999999999  99999999999995       99999999 9999999


Q ss_pred             cccccc
Q 007292          590 KSNPYI  595 (609)
Q Consensus       590 ~~~~~~  595 (609)
                      |+|+++
T Consensus       238 L~~~~~  243 (399)
T 2fji_1          238 MNSVLF  243 (399)
T ss_dssp             SCHHHH
T ss_pred             hChHHH
Confidence            999774

PyMOL of 2fji

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00