Citrus Sinensis ID: 007618
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 596 | ||||||
| 225463870 | 611 | PREDICTED: GPI transamidase component PI | 0.968 | 0.944 | 0.712 | 0.0 | |
| 255560105 | 619 | conserved hypothetical protein [Ricinus | 0.979 | 0.943 | 0.666 | 0.0 | |
| 449441242 | 609 | PREDICTED: GPI transamidase component PI | 0.984 | 0.963 | 0.629 | 0.0 | |
| 224069842 | 584 | predicted protein [Populus trichocarpa] | 0.916 | 0.934 | 0.689 | 0.0 | |
| 296081057 | 520 | unnamed protein product [Vitis vinifera] | 0.842 | 0.965 | 0.683 | 0.0 | |
| 449499226 | 630 | PREDICTED: GPI transamidase component PI | 0.984 | 0.931 | 0.605 | 0.0 | |
| 356566351 | 587 | PREDICTED: GPI transamidase component PI | 0.947 | 0.962 | 0.648 | 0.0 | |
| 356524475 | 579 | PREDICTED: GPI transamidase component PI | 0.954 | 0.982 | 0.643 | 0.0 | |
| 297833498 | 599 | hypothetical protein ARALYDRAFT_896875 [ | 0.949 | 0.944 | 0.641 | 0.0 | |
| 22330899 | 599 | GPI transamidase component PIG-S-related | 0.951 | 0.946 | 0.637 | 0.0 |
| >gi|225463870|ref|XP_002268712.1| PREDICTED: GPI transamidase component PIG-S-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/594 (71%), Positives = 480/594 (80%), Gaps = 17/594 (2%)
Query: 2 SEISPEVPDNRQDAPSHVDPNSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSS 61
SEIS E+PD Q++ S DP + R TKPG+KRL LTL+VLFS LG PFL KS+EIYRS
Sbjct: 13 SEIS-ELPDESQNSVSDFDPCTMRKTKPGLKRLFLTLTVLFSFFLGSPFLLKSIEIYRSP 71
Query: 62 LPFGEISEME----SNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCG 117
LPF +I + S+P L FPC FQA+F+ F+ N L +SI ++ +LT + CG
Sbjct: 72 LPFRDIDSLSDSVGSSPLL-FPCHFQAIFVGFD-NFDAYELGISIKHEMKKLTKHPV-CG 128
Query: 118 ACAN-DLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLG 176
C++ + +SVTVDS S C + + +++ +RCGAI D DDDGVDE L SVLG
Sbjct: 129 TCSDSNYTVSVTVDSGSGCARNYNAESTCMWRCGAIGEFDLG-GGGDDDGVDEFLGSVLG 187
Query: 177 ----VKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVN 232
+ VYSVVVVN GGE +RAVVGKYRHAWI+G V EE + +V+RVAE FVK+FVN
Sbjct: 188 SCEGFRKVYSVVVVNRGGE-VRAVVGKYRHAWIIGGVLEEGMNA-MVARVAETFVKVFVN 245
Query: 233 GGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIA 292
GG E G IHGEFMPVGAD RIVLSFNLLNA+P DW+Y WDFQR+DE LLAP+IK LGP+A
Sbjct: 246 GGKEEGSIHGEFMPVGADGRIVLSFNLLNADPTDWIYGWDFQRIDEILLAPVIKALGPVA 305
Query: 293 NISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF 352
NISVESQVLYHTPKSSFSYWDEKW SYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF
Sbjct: 306 NISVESQVLYHTPKSSFSYWDEKWDSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF 365
Query: 353 VVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGC-LNSETNHPSRHTMSRE 411
VVY+PSAKECPL L LP GEIS TN FISPMWGGV VWNPPGC +SE+ HP+RHT+S +
Sbjct: 366 VVYIPSAKECPLLLQLPNGEISVTNAFISPMWGGVAVWNPPGCSRDSESKHPARHTISPQ 425
Query: 412 DLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHS 471
DLQ VFE+FMGQ RQLFGLKS++LY GASGT +LL S +GFTEWELDVLSRQ CFNL S
Sbjct: 426 DLQKVFEIFMGQLRQLFGLKSDSLYAGASGTTNLLASERGFTEWELDVLSRQHTCFNLVS 485
Query: 472 CATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSL 531
CATTLGSLSRLVQSLPRMIIMDEIGK V+FSLEAAKL QSNASLG ++SAVSS QARSL
Sbjct: 486 CATTLGSLSRLVQSLPRMIIMDEIGKQVKFSLEAAKLTQSNASLGIYDASAVSSRQARSL 545
Query: 532 AEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKY 585
AEDAFFHPSIMS+SYYSFEHCFA+YSPFFLPVSMHVLLAA REW+RYKQE AKY
Sbjct: 546 AEDAFFHPSIMSVSYYSFEHCFAVYSPFFLPVSMHVLLAAFREWRRYKQETAKY 599
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560105|ref|XP_002521070.1| conserved hypothetical protein [Ricinus communis] gi|223539639|gb|EEF41221.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449441242|ref|XP_004138391.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224069842|ref|XP_002303053.1| predicted protein [Populus trichocarpa] gi|222844779|gb|EEE82326.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296081057|emb|CBI18338.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449499226|ref|XP_004160758.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356566351|ref|XP_003551396.1| PREDICTED: GPI transamidase component PIG-S-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356524475|ref|XP_003530854.1| PREDICTED: GPI transamidase component PIG-S-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297833498|ref|XP_002884631.1| hypothetical protein ARALYDRAFT_896875 [Arabidopsis lyrata subsp. lyrata] gi|297330471|gb|EFH60890.1| hypothetical protein ARALYDRAFT_896875 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|22330899|ref|NP_187374.2| GPI transamidase component PIG-S-related protein [Arabidopsis thaliana] gi|17065106|gb|AAL32707.1| Unknown protein [Arabidopsis thaliana] gi|22136078|gb|AAM91117.1| unknown protein [Arabidopsis thaliana] gi|332640987|gb|AEE74508.1| GPI transamidase component PIG-S-related protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 596 | ||||||
| TAIR|locus:2098535 | 599 | AT3G07180 "AT3G07180" [Arabido | 0.978 | 0.973 | 0.570 | 1.4e-172 | |
| UNIPROTKB|E2R643 | 557 | PIGS "Uncharacterized protein" | 0.548 | 0.587 | 0.291 | 5.2e-43 | |
| UNIPROTKB|I3LRK9 | 555 | PIGS "Uncharacterized protein" | 0.543 | 0.583 | 0.302 | 2.2e-42 | |
| DICTYBASE|DDB_G0289515 | 407 | pigS "phosphatidylinositol gly | 0.536 | 0.786 | 0.287 | 2.8e-42 | |
| UNIPROTKB|F6X735 | 555 | PIGS "Uncharacterized protein" | 0.545 | 0.585 | 0.294 | 2.8e-42 | |
| UNIPROTKB|F1MSF3 | 555 | PIGS "GPI transamidase compone | 0.520 | 0.558 | 0.315 | 3.6e-42 | |
| UNIPROTKB|Q3SZL5 | 555 | PIGS "GPI transamidase compone | 0.520 | 0.558 | 0.315 | 5.9e-42 | |
| UNIPROTKB|Q96S52 | 555 | PIGS "GPI transamidase compone | 0.516 | 0.554 | 0.319 | 5.9e-42 | |
| MGI|MGI:2687325 | 555 | Pigs "phosphatidylinositol gly | 0.545 | 0.585 | 0.309 | 9.5e-42 | |
| ZFIN|ZDB-GENE-060929-436 | 566 | pigs "phosphatidylinositol gly | 0.545 | 0.574 | 0.285 | 1.5e-41 |
| TAIR|locus:2098535 AT3G07180 "AT3G07180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1677 (595.4 bits), Expect = 1.4e-172, P = 1.4e-172
Identities = 346/607 (57%), Positives = 410/607 (67%)
Query: 1 MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRXXXXXXXXXXXXXXXXXXWKSVEIYRS 60
M EIS + N P DP + R TKPG+KR WKSVEIYRS
Sbjct: 1 MEEISDRL--NPGITPEF-DPKTMRSTKPGLKRLFITSSVLFSFLLGVPFLWKSVEIYRS 57
Query: 61 SLPFGEIS----EMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQC 116
LPF +I ++ES P L FPC F AVF+ F S P++L+ I D I +LT SSQC
Sbjct: 58 PLPFHDIDSLSDQLESTP-LRFPCNFHAVFVGFRST-DPDNLRSQIQDGINQLTHQSSQC 115
Query: 117 GACANDLALSVTVDSISS-CTQT--HPTDNSNYYRCGAI--SAXXXXXXXXXXXXXXELL 171
G+C D +LSVTV + C+ T H + +Y RCG I + ++
Sbjct: 116 GSC--DFSLSVTVQNREDQCSDTLAHSSTTCSY-RCGVIKRNGFSVGLDDTVDESLNDVF 172
Query: 172 E-----SXXXXXXXXXXXXXXXXXXXIRAVVGKYRHAWIXXXXXXXXXXXXXXXXXXXIF 226
S ++AVVGK RHAWI IF
Sbjct: 173 SGCSENSGKMYSVVVVNKENANGGDEVKAVVGKRRHAWIVGNGLEERYGDIVARVSE-IF 231
Query: 227 VKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIK 286
V++F+NGG E I GEFMPVG+D +IVLSF+LLN+ P DWVYDWDFQR+DE LLAP+ K
Sbjct: 232 VQVFMNGGREEDSIQGEFMPVGSDGKIVLSFSLLNSNPRDWVYDWDFQRIDEALLAPVTK 291
Query: 287 VLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGR 346
L PIANI+VESQVLYHTPKSSFS WD+K +SYIF T DLPFFVNSNEWHLDTS A GR
Sbjct: 292 ALAPIANITVESQVLYHTPKSSFSSWDKKLQSYIFRTSDLPFFVNSNEWHLDTSAGASGR 351
Query: 347 SKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRH 406
SKILQFVVY+PS KECPL L LP EISKTNGFISPMWGGV+VWNP C + ++ PSR+
Sbjct: 352 SKILQFVVYIPSGKECPLLLQLPNVEISKTNGFISPMWGGVIVWNPGNC-DKDSESPSRN 410
Query: 407 TMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFAC 466
T+S +DL+ + E+F+GQFRQLFG KS Y GTY +L S +GFTEWELDVLSR+ C
Sbjct: 411 TISLQDLEQIVEIFLGQFRQLFGFKSEAKYTTGLGTYKILTSERGFTEWELDVLSRKHTC 470
Query: 467 FNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSG 526
FNLHSC+TTLGSLSRLV+SLPRMII DEIG+ V++SL+AAKLAQSNASLG SSA SS
Sbjct: 471 FNLHSCSTTLGSLSRLVRSLPRMIIKDEIGEQVKYSLKAAKLAQSNASLGGYSSSASSSR 530
Query: 527 QARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYT 586
+ARSLAE+AFFHPSIMS+SY+S+EHCFA+YSPFFLPV HV+LAA+REWKRYKQEKAKY
Sbjct: 531 EARSLAENAFFHPSIMSVSYFSYEHCFAVYSPFFLPVVGHVVLAAVREWKRYKQEKAKYL 590
Query: 587 AWKAKVK 593
W + K
Sbjct: 591 TWLTRKK 597
|
|
| UNIPROTKB|E2R643 PIGS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LRK9 PIGS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0289515 pigS "phosphatidylinositol glycan, class S" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F6X735 PIGS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MSF3 PIGS "GPI transamidase component PIG-S" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3SZL5 PIGS "GPI transamidase component PIG-S" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96S52 PIGS "GPI transamidase component PIG-S" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:2687325 Pigs "phosphatidylinositol glycan anchor biosynthesis, class S" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-060929-436 pigs "phosphatidylinositol glycan anchor biosynthesis, class S" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 596 | |||
| pfam10510 | 502 | pfam10510, PIG-S, Phosphatidylinositol-glycan bios | 1e-133 |
| >gnl|CDD|220790 pfam10510, PIG-S, Phosphatidylinositol-glycan biosynthesis class S protein | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-133
Identities = 165/551 (29%), Positives = 243/551 (44%), Gaps = 58/551 (10%)
Query: 40 VLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPS--LSFPCRFQAVFINFNSNPSPNH 97
VL ++LG P WK+ IYR+ LP EI + N S + FP V + +
Sbjct: 4 VLLIILLGVPLWWKTTSIYRAPLPADEIESLSDNKSCPIHFPVPVYIVSDSLFPD-DAEA 62
Query: 98 LQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDF 157
LQ + + +L +L + V + + + +S R
Sbjct: 63 LQREVQHLLDDLAQTQVAW-------SLQLKVLRETVDEEEELSPSSTEVR--------- 106
Query: 158 DFSNDDDDGVDELLESVLGVKNVYSVVVVN----GGGEGIRAVVGKYRHAWIVGSVEEEE 213
+ DE S L + VV + + + ++ A +V V +EE
Sbjct: 107 ----VVPEEEDESSSSELQAGGKETDVVYPDSSVPSPDLPSSYLAQFVAATLVDEVFKEE 162
Query: 214 EESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDF 273
++ + E V LSF+LLN +P D WD
Sbjct: 163 WA---------RISQILST----SSKSSAERRSVKYSPNYHLSFSLLNPDPKDGPVSWDI 209
Query: 274 QRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSN 333
+ + + P+++ L PIAN +V++QV Y+ S +DEK SY+ DL F+NS
Sbjct: 210 EAALKEYITPLLEKLSPIANFTVDTQVQYYATLSLQPLYDEKQSSYVLKEDDLSHFINSA 269
Query: 334 EWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPP 393
EW L TSI + FVVYVPSA + PL +L GE +KTN F+ P WGGVV+ NPP
Sbjct: 270 EWSLSTSITSNPVLN---FVVYVPSAAQSPLPILDSDGEGTKTNSFLIPQWGGVVILNPP 326
Query: 394 GCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFT 453
+ P +S E+L V E F Q R L GL S +
Sbjct: 327 CTPLPLSEPP---VLSEEELAPVMETFSRQLRLLLGLPSTP------------VADALSP 371
Query: 454 EWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNA 513
WELD L R+ NL S ++TLGSL RL SLP + I DE+ V +LE + A
Sbjct: 372 PWELDSLKRRRTVENLLSASSTLGSLVRLTDSLPNISIPDEVADQVSTALELLERAVRLL 431
Query: 514 SLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALR 573
+ G + V S +A +LAE AFF PS++ Y+ EH +A+Y P P+ + +LL L+
Sbjct: 432 NNGRLNEALVLSREAVALAERAFFDPSMVQQLYFPDEHKYAVYLPLLGPIGVPLLLGLLK 491
Query: 574 EWKRYKQEKAK 584
E K ++ + +
Sbjct: 492 ELKEIRKRRKE 502
|
PIG-S is one of several key, core, components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum. Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI. Mammalian GPITransamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear. Length = 502 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 596 | |||
| PF10510 | 517 | PIG-S: Phosphatidylinositol-glycan biosynthesis cl | 100.0 | |
| KOG2459 | 536 | consensus GPI transamidase complex, GPI17/PIG-S co | 100.0 | |
| PF07297 | 78 | DPM2: Dolichol phosphate-mannose biosynthesis regu | 88.9 |
| >PF10510 PIG-S: Phosphatidylinositol-glycan biosynthesis class S protein; InterPro: IPR019540 Phosphatidylinositol-glycan biosynthesis class S protein (PIG-S) is one of several key, core components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-113 Score=950.56 Aligned_cols=511 Identities=34% Similarity=0.559 Sum_probs=415.9
Q ss_pred hHHHHHHHHHhhhhhhhccceeecCCChhHHhhcccCCCC--CCCceeEEEEEecCCCCCchhHHHHHHHHHhhhhcCCc
Q 007618 37 TLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSL--SFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSS 114 (596)
Q Consensus 37 ~~~~~~~~llG~PlWwktT~iyRa~LP~~~I~~L~~~~~~--~~~~~i~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (596)
++|+++++++|+|+|||||+||||+||+++|++|++..+. .++|+|++++.....++....++.++++.+++.. ...
T Consensus 1 Ls~~~v~illG~PlWwkTT~iyRa~LP~~~I~~l~~~~~~~i~~~i~v~v~~~~~~~~~~~~~L~~~v~~~l~~~~-~~~ 79 (517)
T PF10510_consen 1 LSFWLVVILLGLPLWWKTTSIYRAPLPYDEIESLSDRKSCPIHFPIPVYVVSPSYFFPDDAESLQREVQHALDDLN-KKS 79 (517)
T ss_pred CcHHHHHHHHhHHHHHhccceEecCCCHHHHHHhhhcccCCcceeeEEEEEecCCCCHHHHHHHHHHHHHHhhccc-ccC
Confidence 3678899999999999999999999999999999977543 4455443333321123334555555555555433 111
Q ss_pred cCCCCCCcceEEEEEecCCccccCCCCCCCCccccccccccccCCCCCCCchhhHhhhhhcCCCcEEEEEEEcCC----C
Q 007618 115 QCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGG----G 190 (596)
Q Consensus 115 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ld~~~~~~~~~~~~~~vv~~~~~----~ 190 (596)
..+|++++.......|..+. .....+.|..+.. .+...+++.+...+....++++++++. +
T Consensus 80 -----~~~~~l~v~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 144 (517)
T PF10510_consen 80 -----FSNWSLQVKLYDESIDAEEA--ISESSAECLVLRV--------VPEELDEFSSYQLSPDSKETVVVYSPNSVPSP 144 (517)
T ss_pred -----CceEEEEEEeccCCcchhhh--ccccchhhccccc--------ccccccccccccccCCCceEEEEECchhccCC
Confidence 24899999999876654332 1112222221111 234445555566666677777777543 3
Q ss_pred CcceEEecccceEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCccccccCCcccccCCCCcEEEEEEEecCCCCCcccc
Q 007618 191 EGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYD 270 (596)
Q Consensus 191 ~~~~~vvg~~r~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~y~LsFSLLn~dp~~~~v~ 270 (596)
+.++.++|+++++|++.. ......+.+.+.+.+.+... .....|+++|+++|||+|||||+||+.+.++
T Consensus 145 ~~~~~~l~~~i~~~l~e~---------~~~~e~~~l~~~~~~~~~~~--~~~~~r~~~~s~~y~L~fSLLn~dp~~~~~~ 213 (517)
T PF10510_consen 145 DTSSSVLGKFIAAWLVEE---------VFKEEWARLSQILSSSSDSE--DKINSRSVPYSPNYHLSFSLLNPDPSSHPVS 213 (517)
T ss_pred CcchhhHHHHHHHHHHHH---------HHHHHHHHHHHHhccCCccc--cccccccccCCCceEEEEEEECCCCCcCcCc
Confidence 457789999999988832 22222333334332222211 2333589999999999999999999977799
Q ss_pred cccHHHHHHhHHHHHHHhCCcceeEEEeeeEEecCCCCCcccccccceeeeecCCCCcccccCCccccccccCCCCCcee
Q 007618 271 WDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKIL 350 (596)
Q Consensus 271 Wdie~~~~~yl~P~l~~Ls~iaNFtV~SQVly~~~l~~~~~~d~~~~~~~l~~~~L~~fIN~~Ew~L~ss~s~~~~~p~L 350 (596)
|||++++++||+||+++|++++||||+|||+||+++...+.++++.++|+|+.++|++|||++||+|+++++ ..|+|
T Consensus 214 Wdi~~~i~~yl~P~l~~Ls~i~nftV~SQv~yya~l~~~~~~~~~~~~~~l~~~~Ls~fin~~ew~L~~~~~---~~p~l 290 (517)
T PF10510_consen 214 WDIESAIEEYLQPFLDSLSPIANFTVDSQVLYYAPLSVQPRWDEDSSSYYLSEEDLSHFINSAEWSLDSSIS---NDPTL 290 (517)
T ss_pred CchHHHHHHHHHHHHHHhccceeeEEEEeEEeecCCCCCccccCCCCceeecHHHcccccCHhhcCCCCCCC---CCCeE
Confidence 999999999999999999999999999999999999998999988899999999999999999999999965 58999
Q ss_pred EEEEEecCCCCCCceeeCCCCCccccceEEeccceEEEEECCCCCCCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhCC
Q 007618 351 QFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGL 430 (596)
Q Consensus 351 nFvvyvPs~~~~PL~I~~~~g~~s~tnSFl~PqWGGV~I~N~~~~~~~~~~~~~~~~ls~~~L~~vm~~F~~qLr~LLGl 430 (596)
||+||||+++++||+|++++|+.+.+|||++||||||+|+|++ |... ..+...++++++|.++|++|++|||+|||+
T Consensus 291 nfvlyvP~~~~~PL~i~~~~g~~~~~nsfliPqWGgv~I~N~~-~~~~--~~~~~~~~~~~~l~~im~~F~~qL~~LLGl 367 (517)
T PF10510_consen 291 NFVLYVPSCEHSPLYIQDSDGSPSSTNSFLIPQWGGVVILNPP-CSVS--NNSSNPVLSEEDLQPIMETFLSQLRQLLGL 367 (517)
T ss_pred EEEEEecCcccCCceEeCCCCCccccceEeeCCcceEEEECCc-cccc--cCCCCccccHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999888999999999999999999 4311 123456789999999999999999999999
Q ss_pred CCCCCcCCCCCcccccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHHHHHH
Q 007618 431 KSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQ 510 (596)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~g~~~wElD~L~R~rt~enl~~a~~TL~SL~kL~~~i~nm~I~d~V~~~V~~al~~i~~a~ 510 (596)
++.+...+... .+...|+++||+|+|+|+|+++|+++|++||+||+||+++||||+|||+|+++|+.|++++++++
T Consensus 368 ~~~~~~~~~~~----~~~~~~~~~~eld~l~r~r~~~~l~~a~~TL~SL~~L~~~i~~i~I~~~V~~~v~~al~~l~~a~ 443 (517)
T PF10510_consen 368 PSSPSSSGVTV----EPSSTGSPPWELDSLLRRRTVENLASASSTLQSLAKLLDSIPNIVIPDEVAERVQQALEALEQAI 443 (517)
T ss_pred CCCCccccccc----cccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99876544432 23668999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCchhHHHHHHHHHHHHHHhcCCccccccccCCccceeEEEecchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007618 511 SNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAK 584 (596)
Q Consensus 511 ~~~~~g~~~~al~~ar~A~~~SE~AFFDpsml~llYFPdEhK~AVYlPLf~Pv~vPlllslire~k~~~~~r~~ 584 (596)
+.++.|+++.|+.+||+|+.+||+||||||||+|+|||||||||||+|||||+++|+++|++||+|+||++|+|
T Consensus 444 ~~l~~~~~~~al~~a~~a~~~ae~AFfd~sml~~lyFP~EhK~AVY~PLf~Pi~~pl~~~~~~~~k~~~~~rk~ 517 (517)
T PF10510_consen 444 DALNNGDLEEALAHAREAFALAERAFFDPSMLQQLYFPDEHKYAVYLPLFGPISVPLLLGLLKELKEWRKRRKE 517 (517)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhCCHhhhhhccCChhheeEeeehhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
|
Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI []. Mammalian GPI transamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for its function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear []. |
| >KOG2459 consensus GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF07297 DPM2: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2); InterPro: IPR009914 This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 596 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 6e-10
Identities = 81/551 (14%), Positives = 181/551 (32%), Gaps = 143/551 (25%)
Query: 139 HPTD---NSNYYRCGAISAV-------DFDFSNDDD--------DGVDELLESVLGVKNV 180
H D + Y+ I +V +FD + D + +D ++ S V
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 181 YSV--VVVNGGGEGIRAVVG---KYRHAWIVGSVEEEEEESVLVSR-----------VAE 224
+ +++ E ++ V + + +++ ++ E+ + +++R +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 225 IFVKMFVNGGTE-----NGL----------IHGEFMPVGADRRIVLSFNLLNAEP----- 264
+F K V+ L I G + G+ + ++ ++ +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VL-GSGKT-WVALDVCLSYKVQCKM 180
Query: 265 NDWVYDW-DFQRV--DETLLAPIIKVLGPIA-NISVESQVLYHTPKSSFSYWDEKWKSYI 320
+ ++ W + + ET+L + K+L I N + S + + + +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI--HSIQAELRRL 237
Query: 321 FSTKDLPFFVNS--------NEWHLDTSIAAGGRSKIL------QFVVYVPSAKECPLSL 366
+K N N + A KIL Q ++ +A +SL
Sbjct: 238 LKSKPYE---NCLLVLLNVQNAKAWN---AFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 367 LLPTGEISKTNG---FISPMWGGVVVWNPPGCLNSE--TNHPSRHTM---SREDLQAVFE 418
+ ++ + + P L E T +P R ++ S D A ++
Sbjct: 292 DHHSMTLTPDEVKSLLLK------YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 419 VFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGS 478
++ + K + I +S L P+ E + + + F + T
Sbjct: 346 ----NWKHVNCDKLTTI-IESSLN-VLEPA-------EYRKMFDRLSVFPPSAHIPT-IL 391
Query: 479 LSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVS--SGQ---ARSLAE 533
LS + + + +M + KL ++SL K + S +S S L
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSL-VEK---------QPKESTISIPSIYLELKVKLEN 441
Query: 534 DAFFHPSIMSISYYSFEHCFAIYSP--------FFLPVSMHVLLAALREWKRYKQEKAKY 585
+ H SI + +Y+ F F+ + H L + +R + +
Sbjct: 442 EYALHRSI--VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--LKNIEHPERMTLFRMVF 497
Query: 586 T--AW-KAKVK 593
+ + K++
Sbjct: 498 LDFRFLEQKIR 508
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00