Citrus Sinensis ID: 007618


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590------
MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVES
cccccccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHcccEEccccccHHHHcccccccccccEEEEEEEEccccccccccHHHHHHHHHHHccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHcccccEEEEEEEcccccccEEEEcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEEEccccccccEEEccccccccccEEEccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHccEEEEccccHHHHHHHHccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccHHHHccccccEEEccHHHHccccHHHHHHHHHcccHHHcccccccccHHHHHcHHHccccccccEEEEEEcccccccEEEEccccccEEEccHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccEccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccccccccccccEEEcHHHcccEEccccccccccccccccccEEEEEEEEcccccccEEEEcccccccccccEEcccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
mseispevpdnrqdapshvdpnstritkpgvKRLVLTLSVLFSLVLGFPFLWKSVEIYrsslpfgeisemesnpslsfpcrFQAVFinfnsnpspnhlQLSILDKITeltsnssqcgacanDLALSVTVdsissctqthptdnsnyyrcgaisavdfdfsnddddgVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNggtenglihgefmpvgadRRIVLSFNllnaepndwvydwdfqrvdETLLAPIIKVlgpianisvesqvlyhtpkssfsywDEKWKsyifstkdlpffvnsnewhldtsiaaggrsKILQFVVYVpsakecplslllptgeisktngfispmwggvvvwnppgclnsetnhpsrhtmsrEDLQAVFEVFMGQFRQlfglksnnlyigasgtyhllpsgkgfteWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSnaslgdnessavssgqarslaedaffhpsimsisyysfehcfaiyspfflPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVES
mseispevpdnrqdapshvdpnstritkpgvKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQthptdnsnyyrCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVgsveeeeeesVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKakytawkakvkves
MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRlvltlsvlfslvlgfpflWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAvdfdfsnddddgvdELLESvlgvknvysvvvvngggegIRAVVGKYRHAWIvgsveeeeeesvlvsrvaeIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVES
*****************************GVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEIS******SLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCL****************LQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEA****************************DAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKA******
**********************************VLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFV*********************ADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSF****EKWKSYIFSTKDLPFFVNSNEWHL*********SKILQFVVYVPSAKECPL*************GFISPMWGGVVVWNPPGCL**********TMSREDLQAVFEVFMGQFRQLFGLKSNN**************GKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKR*******************
*********************NSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSV*********VSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQ*******************SLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVES
****************************PGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCL*******SRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAW********
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
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MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYTAWKAKVKVES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query596 2.2.26 [Sep-21-2011]
Q96S52555 GPI transamidase componen yes no 0.835 0.897 0.257 2e-35
Q5XI31555 GPI transamidase componen yes no 0.518 0.556 0.311 1e-32
Q3SZL5555 GPI transamidase componen yes no 0.520 0.558 0.315 1e-32
Q6PD26555 GPI transamidase componen yes no 0.545 0.585 0.300 2e-31
Q10351554 GPI transamidase componen yes no 0.796 0.857 0.238 4e-22
Q04080534 GPI transamidase componen yes no 0.528 0.589 0.243 8e-10
>sp|Q96S52|PIGS_HUMAN GPI transamidase component PIG-S OS=Homo sapiens GN=PIGS PE=1 SV=3 Back     alignment and function desciption
 Score =  151 bits (381), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 250/567 (44%), Gaps = 69/567 (12%)

Query: 32  KRLVLTLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSLSFPCRFQAVFINFNS 91
           KR  L  + + ++VLG P  WK+ E YR+SLP+ +IS +                     
Sbjct: 17  KRAALFFAAV-AIVLGLPLWWKTTETYRASLPYSQISGL--------------------- 54

Query: 92  NPSPNHLQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGA 151
               N LQL ++  +T + +  S        L  +V  +      +  P       +C  
Sbjct: 55  ----NALQLRLMVPVTVVFTRESVPLDDQEKLPFTVVHE------REIPLKYKMKIKCRF 104

Query: 152 ISAVDFDFSNDDDD-----------GVDELLESVLGVKNVYSVVVVNGG-GEGIRAVVGK 199
             A      ++++             +DE  E   G   VY +   +    + + + +G 
Sbjct: 105 QKAYRRALDHEEEALSSGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLLPQDMMSYIGP 164

Query: 200 YRHAWIVGSVEEEEEESVLVSRVAEIFVKM----------FVNGGTENGLIHGEFMPVGA 249
            R A +V  +   E  +++  R+ ++   M            +   E+     +  P+ +
Sbjct: 165 KRTA-VVRGIMHREAFNIIGRRIVQVAQAMSLTEDVLAAALADHLPEDKWSAEKRRPLKS 223

Query: 250 DRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSF 309
                ++F+LLN +P      WD +      + P +  LG   N SV+SQ+LY+      
Sbjct: 224 SLGYEITFSLLNPDPKSHDVYWDIEGAVRRYVQPFLNALGAAGNFSVDSQILYYAMLGVN 283

Query: 310 SYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLP 369
             +D    SY      LP  +N  E  L +S  A     +L F++YVP     PL +   
Sbjct: 284 PRFDSASSSYYLDMHSLPHVINPVESRLGSS--AASLYPVLNFLLYVPELAHSPLYIQDK 341

Query: 370 TGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSRE-DLQAVFEVFMGQFRQLF 428
            G    TN F SP WGG++V+N    ++S+T + S   +  E D+  V EVF+ Q R LF
Sbjct: 342 DGAPVATNAFHSPRWGGIMVYN----VDSKTYNASVLPVRVEVDMVRVMEVFLAQLRLLF 397

Query: 429 GLKSNNLYIGA--SGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSL 486
           G+    L      SG     P+ +G   WELD L    +  NL +  TTL SL++L+  +
Sbjct: 398 GIAQPQLPPKCLLSG-----PTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKI 452

Query: 487 PRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISY 546
             ++I D++   V  ++ A + +    + G   S+ V+S +A + +E AFF PS++ + Y
Sbjct: 453 SNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDPSLLHLLY 512

Query: 547 YSFEHCFAIYSPFFLPVSMHVLLAALR 573
           +  +  FAIY P FLP+++ +LL+ ++
Sbjct: 513 FPDDQKFAIYIPLFLPMAVPILLSLVK 539




Component of the GPI transamidase complex. Essential for transfer of GPI to proteins, particularly for formation of carbonyl intermediates.
Homo sapiens (taxid: 9606)
>sp|Q5XI31|PIGS_RAT GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3 Back     alignment and function description
>sp|Q3SZL5|PIGS_BOVIN GPI transamidase component PIG-S OS=Bos taurus GN=PIGS PE=2 SV=3 Back     alignment and function description
>sp|Q6PD26|PIGS_MOUSE GPI transamidase component PIG-S OS=Mus musculus GN=Pigs PE=1 SV=3 Back     alignment and function description
>sp|Q10351|PIGS_SCHPO GPI transamidase component PIG-S homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi17 PE=3 SV=1 Back     alignment and function description
>sp|Q04080|GPI17_YEAST GPI transamidase component GPI17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI17 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query596
225463870611 PREDICTED: GPI transamidase component PI 0.968 0.944 0.712 0.0
255560105619 conserved hypothetical protein [Ricinus 0.979 0.943 0.666 0.0
449441242609 PREDICTED: GPI transamidase component PI 0.984 0.963 0.629 0.0
224069842584 predicted protein [Populus trichocarpa] 0.916 0.934 0.689 0.0
296081057520 unnamed protein product [Vitis vinifera] 0.842 0.965 0.683 0.0
449499226630 PREDICTED: GPI transamidase component PI 0.984 0.931 0.605 0.0
356566351587 PREDICTED: GPI transamidase component PI 0.947 0.962 0.648 0.0
356524475579 PREDICTED: GPI transamidase component PI 0.954 0.982 0.643 0.0
297833498599 hypothetical protein ARALYDRAFT_896875 [ 0.949 0.944 0.641 0.0
22330899599 GPI transamidase component PIG-S-related 0.951 0.946 0.637 0.0
>gi|225463870|ref|XP_002268712.1| PREDICTED: GPI transamidase component PIG-S-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/594 (71%), Positives = 480/594 (80%), Gaps = 17/594 (2%)

Query: 2   SEISPEVPDNRQDAPSHVDPNSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRSS 61
           SEIS E+PD  Q++ S  DP + R TKPG+KRL LTL+VLFS  LG PFL KS+EIYRS 
Sbjct: 13  SEIS-ELPDESQNSVSDFDPCTMRKTKPGLKRLFLTLTVLFSFFLGSPFLLKSIEIYRSP 71

Query: 62  LPFGEISEME----SNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCG 117
           LPF +I  +     S+P L FPC FQA+F+ F+ N     L +SI  ++ +LT +   CG
Sbjct: 72  LPFRDIDSLSDSVGSSPLL-FPCHFQAIFVGFD-NFDAYELGISIKHEMKKLTKHPV-CG 128

Query: 118 ACAN-DLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLG 176
            C++ +  +SVTVDS S C + +  +++  +RCGAI   D      DDDGVDE L SVLG
Sbjct: 129 TCSDSNYTVSVTVDSGSGCARNYNAESTCMWRCGAIGEFDLG-GGGDDDGVDEFLGSVLG 187

Query: 177 ----VKNVYSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVN 232
                + VYSVVVVN GGE +RAVVGKYRHAWI+G V EE   + +V+RVAE FVK+FVN
Sbjct: 188 SCEGFRKVYSVVVVNRGGE-VRAVVGKYRHAWIIGGVLEEGMNA-MVARVAETFVKVFVN 245

Query: 233 GGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIA 292
           GG E G IHGEFMPVGAD RIVLSFNLLNA+P DW+Y WDFQR+DE LLAP+IK LGP+A
Sbjct: 246 GGKEEGSIHGEFMPVGADGRIVLSFNLLNADPTDWIYGWDFQRIDEILLAPVIKALGPVA 305

Query: 293 NISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF 352
           NISVESQVLYHTPKSSFSYWDEKW SYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF
Sbjct: 306 NISVESQVLYHTPKSSFSYWDEKWDSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQF 365

Query: 353 VVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGC-LNSETNHPSRHTMSRE 411
           VVY+PSAKECPL L LP GEIS TN FISPMWGGV VWNPPGC  +SE+ HP+RHT+S +
Sbjct: 366 VVYIPSAKECPLLLQLPNGEISVTNAFISPMWGGVAVWNPPGCSRDSESKHPARHTISPQ 425

Query: 412 DLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHS 471
           DLQ VFE+FMGQ RQLFGLKS++LY GASGT +LL S +GFTEWELDVLSRQ  CFNL S
Sbjct: 426 DLQKVFEIFMGQLRQLFGLKSDSLYAGASGTTNLLASERGFTEWELDVLSRQHTCFNLVS 485

Query: 472 CATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSGQARSL 531
           CATTLGSLSRLVQSLPRMIIMDEIGK V+FSLEAAKL QSNASLG  ++SAVSS QARSL
Sbjct: 486 CATTLGSLSRLVQSLPRMIIMDEIGKQVKFSLEAAKLTQSNASLGIYDASAVSSRQARSL 545

Query: 532 AEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKY 585
           AEDAFFHPSIMS+SYYSFEHCFA+YSPFFLPVSMHVLLAA REW+RYKQE AKY
Sbjct: 546 AEDAFFHPSIMSVSYYSFEHCFAVYSPFFLPVSMHVLLAAFREWRRYKQETAKY 599




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560105|ref|XP_002521070.1| conserved hypothetical protein [Ricinus communis] gi|223539639|gb|EEF41221.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449441242|ref|XP_004138391.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224069842|ref|XP_002303053.1| predicted protein [Populus trichocarpa] gi|222844779|gb|EEE82326.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296081057|emb|CBI18338.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449499226|ref|XP_004160758.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356566351|ref|XP_003551396.1| PREDICTED: GPI transamidase component PIG-S-like [Glycine max] Back     alignment and taxonomy information
>gi|356524475|ref|XP_003530854.1| PREDICTED: GPI transamidase component PIG-S-like [Glycine max] Back     alignment and taxonomy information
>gi|297833498|ref|XP_002884631.1| hypothetical protein ARALYDRAFT_896875 [Arabidopsis lyrata subsp. lyrata] gi|297330471|gb|EFH60890.1| hypothetical protein ARALYDRAFT_896875 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|22330899|ref|NP_187374.2| GPI transamidase component PIG-S-related protein [Arabidopsis thaliana] gi|17065106|gb|AAL32707.1| Unknown protein [Arabidopsis thaliana] gi|22136078|gb|AAM91117.1| unknown protein [Arabidopsis thaliana] gi|332640987|gb|AEE74508.1| GPI transamidase component PIG-S-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query596
TAIR|locus:2098535599 AT3G07180 "AT3G07180" [Arabido 0.978 0.973 0.570 1.4e-172
UNIPROTKB|E2R643557 PIGS "Uncharacterized protein" 0.548 0.587 0.291 5.2e-43
UNIPROTKB|I3LRK9555 PIGS "Uncharacterized protein" 0.543 0.583 0.302 2.2e-42
DICTYBASE|DDB_G0289515407 pigS "phosphatidylinositol gly 0.536 0.786 0.287 2.8e-42
UNIPROTKB|F6X735555 PIGS "Uncharacterized protein" 0.545 0.585 0.294 2.8e-42
UNIPROTKB|F1MSF3555 PIGS "GPI transamidase compone 0.520 0.558 0.315 3.6e-42
UNIPROTKB|Q3SZL5555 PIGS "GPI transamidase compone 0.520 0.558 0.315 5.9e-42
UNIPROTKB|Q96S52555 PIGS "GPI transamidase compone 0.516 0.554 0.319 5.9e-42
MGI|MGI:2687325555 Pigs "phosphatidylinositol gly 0.545 0.585 0.309 9.5e-42
ZFIN|ZDB-GENE-060929-436566 pigs "phosphatidylinositol gly 0.545 0.574 0.285 1.5e-41
TAIR|locus:2098535 AT3G07180 "AT3G07180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1677 (595.4 bits), Expect = 1.4e-172, P = 1.4e-172
 Identities = 346/607 (57%), Positives = 410/607 (67%)

Query:     1 MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRXXXXXXXXXXXXXXXXXXWKSVEIYRS 60
             M EIS  +  N    P   DP + R TKPG+KR                  WKSVEIYRS
Sbjct:     1 MEEISDRL--NPGITPEF-DPKTMRSTKPGLKRLFITSSVLFSFLLGVPFLWKSVEIYRS 57

Query:    61 SLPFGEIS----EMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQC 116
              LPF +I     ++ES P L FPC F AVF+ F S   P++L+  I D I +LT  SSQC
Sbjct:    58 PLPFHDIDSLSDQLESTP-LRFPCNFHAVFVGFRST-DPDNLRSQIQDGINQLTHQSSQC 115

Query:   117 GACANDLALSVTVDSISS-CTQT--HPTDNSNYYRCGAI--SAXXXXXXXXXXXXXXELL 171
             G+C  D +LSVTV +    C+ T  H +   +Y RCG I  +               ++ 
Sbjct:   116 GSC--DFSLSVTVQNREDQCSDTLAHSSTTCSY-RCGVIKRNGFSVGLDDTVDESLNDVF 172

Query:   172 E-----SXXXXXXXXXXXXXXXXXXXIRAVVGKYRHAWIXXXXXXXXXXXXXXXXXXXIF 226
                   S                   ++AVVGK RHAWI                   IF
Sbjct:   173 SGCSENSGKMYSVVVVNKENANGGDEVKAVVGKRRHAWIVGNGLEERYGDIVARVSE-IF 231

Query:   227 VKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIK 286
             V++F+NGG E   I GEFMPVG+D +IVLSF+LLN+ P DWVYDWDFQR+DE LLAP+ K
Sbjct:   232 VQVFMNGGREEDSIQGEFMPVGSDGKIVLSFSLLNSNPRDWVYDWDFQRIDEALLAPVTK 291

Query:   287 VLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGR 346
              L PIANI+VESQVLYHTPKSSFS WD+K +SYIF T DLPFFVNSNEWHLDTS  A GR
Sbjct:   292 ALAPIANITVESQVLYHTPKSSFSSWDKKLQSYIFRTSDLPFFVNSNEWHLDTSAGASGR 351

Query:   347 SKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRH 406
             SKILQFVVY+PS KECPL L LP  EISKTNGFISPMWGGV+VWNP  C + ++  PSR+
Sbjct:   352 SKILQFVVYIPSGKECPLLLQLPNVEISKTNGFISPMWGGVIVWNPGNC-DKDSESPSRN 410

Query:   407 TMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFAC 466
             T+S +DL+ + E+F+GQFRQLFG KS   Y    GTY +L S +GFTEWELDVLSR+  C
Sbjct:   411 TISLQDLEQIVEIFLGQFRQLFGFKSEAKYTTGLGTYKILTSERGFTEWELDVLSRKHTC 470

Query:   467 FNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVSSG 526
             FNLHSC+TTLGSLSRLV+SLPRMII DEIG+ V++SL+AAKLAQSNASLG   SSA SS 
Sbjct:   471 FNLHSCSTTLGSLSRLVRSLPRMIIKDEIGEQVKYSLKAAKLAQSNASLGGYSSSASSSR 530

Query:   527 QARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAKYT 586
             +ARSLAE+AFFHPSIMS+SY+S+EHCFA+YSPFFLPV  HV+LAA+REWKRYKQEKAKY 
Sbjct:   531 EARSLAENAFFHPSIMSVSYFSYEHCFAVYSPFFLPVVGHVVLAAVREWKRYKQEKAKYL 590

Query:   587 AWKAKVK 593
              W  + K
Sbjct:   591 TWLTRKK 597




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
UNIPROTKB|E2R643 PIGS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LRK9 PIGS "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289515 pigS "phosphatidylinositol glycan, class S" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F6X735 PIGS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MSF3 PIGS "GPI transamidase component PIG-S" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZL5 PIGS "GPI transamidase component PIG-S" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96S52 PIGS "GPI transamidase component PIG-S" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2687325 Pigs "phosphatidylinositol glycan anchor biosynthesis, class S" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-436 pigs "phosphatidylinositol glycan anchor biosynthesis, class S" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query596
pfam10510502 pfam10510, PIG-S, Phosphatidylinositol-glycan bios 1e-133
>gnl|CDD|220790 pfam10510, PIG-S, Phosphatidylinositol-glycan biosynthesis class S protein Back     alignment and domain information
 Score =  399 bits (1027), Expect = e-133
 Identities = 165/551 (29%), Positives = 243/551 (44%), Gaps = 58/551 (10%)

Query: 40  VLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPS--LSFPCRFQAVFINFNSNPSPNH 97
           VL  ++LG P  WK+  IYR+ LP  EI  +  N S  + FP     V  +   +     
Sbjct: 4   VLLIILLGVPLWWKTTSIYRAPLPADEIESLSDNKSCPIHFPVPVYIVSDSLFPD-DAEA 62

Query: 98  LQLSILDKITELTSNSSQCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDF 157
           LQ  +   + +L              +L + V   +   +   + +S   R         
Sbjct: 63  LQREVQHLLDDLAQTQVAW-------SLQLKVLRETVDEEEELSPSSTEVR--------- 106

Query: 158 DFSNDDDDGVDELLESVLGVKNVYSVVVVN----GGGEGIRAVVGKYRHAWIVGSVEEEE 213
                  +  DE   S L      + VV         +   + + ++  A +V  V +EE
Sbjct: 107 ----VVPEEEDESSSSELQAGGKETDVVYPDSSVPSPDLPSSYLAQFVAATLVDEVFKEE 162

Query: 214 EESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDF 273
                         ++       +     E   V       LSF+LLN +P D    WD 
Sbjct: 163 WA---------RISQILST----SSKSSAERRSVKYSPNYHLSFSLLNPDPKDGPVSWDI 209

Query: 274 QRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSN 333
           +   +  + P+++ L PIAN +V++QV Y+   S    +DEK  SY+    DL  F+NS 
Sbjct: 210 EAALKEYITPLLEKLSPIANFTVDTQVQYYATLSLQPLYDEKQSSYVLKEDDLSHFINSA 269

Query: 334 EWHLDTSIAAGGRSKILQFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPP 393
           EW L TSI +        FVVYVPSA + PL +L   GE +KTN F+ P WGGVV+ NPP
Sbjct: 270 EWSLSTSITSNPVLN---FVVYVPSAAQSPLPILDSDGEGTKTNSFLIPQWGGVVILNPP 326

Query: 394 GCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFT 453
                 +  P    +S E+L  V E F  Q R L GL S               +     
Sbjct: 327 CTPLPLSEPP---VLSEEELAPVMETFSRQLRLLLGLPSTP------------VADALSP 371

Query: 454 EWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNA 513
            WELD L R+    NL S ++TLGSL RL  SLP + I DE+   V  +LE  + A    
Sbjct: 372 PWELDSLKRRRTVENLLSASSTLGSLVRLTDSLPNISIPDEVADQVSTALELLERAVRLL 431

Query: 514 SLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALR 573
           + G    + V S +A +LAE AFF PS++   Y+  EH +A+Y P   P+ + +LL  L+
Sbjct: 432 NNGRLNEALVLSREAVALAERAFFDPSMVQQLYFPDEHKYAVYLPLLGPIGVPLLLGLLK 491

Query: 574 EWKRYKQEKAK 584
           E K  ++ + +
Sbjct: 492 ELKEIRKRRKE 502


PIG-S is one of several key, core, components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum. Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI. Mammalian GPITransamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear. Length = 502

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 596
PF10510517 PIG-S: Phosphatidylinositol-glycan biosynthesis cl 100.0
KOG2459536 consensus GPI transamidase complex, GPI17/PIG-S co 100.0
PF0729778 DPM2: Dolichol phosphate-mannose biosynthesis regu 88.9
>PF10510 PIG-S: Phosphatidylinositol-glycan biosynthesis class S protein; InterPro: IPR019540 Phosphatidylinositol-glycan biosynthesis class S protein (PIG-S) is one of several key, core components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum Back     alignment and domain information
Probab=100.00  E-value=2.8e-113  Score=950.56  Aligned_cols=511  Identities=34%  Similarity=0.559  Sum_probs=415.9

Q ss_pred             hHHHHHHHHHhhhhhhhccceeecCCChhHHhhcccCCCC--CCCceeEEEEEecCCCCCchhHHHHHHHHHhhhhcCCc
Q 007618           37 TLSVLFSLVLGFPFLWKSVEIYRSSLPFGEISEMESNPSL--SFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSS  114 (596)
Q Consensus        37 ~~~~~~~~llG~PlWwktT~iyRa~LP~~~I~~L~~~~~~--~~~~~i~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  114 (596)
                      ++|+++++++|+|+|||||+||||+||+++|++|++..+.  .++|+|++++.....++....++.++++.+++.. ...
T Consensus         1 Ls~~~v~illG~PlWwkTT~iyRa~LP~~~I~~l~~~~~~~i~~~i~v~v~~~~~~~~~~~~~L~~~v~~~l~~~~-~~~   79 (517)
T PF10510_consen    1 LSFWLVVILLGLPLWWKTTSIYRAPLPYDEIESLSDRKSCPIHFPIPVYVVSPSYFFPDDAESLQREVQHALDDLN-KKS   79 (517)
T ss_pred             CcHHHHHHHHhHHHHHhccceEecCCCHHHHHHhhhcccCCcceeeEEEEEecCCCCHHHHHHHHHHHHHHhhccc-ccC
Confidence            3678899999999999999999999999999999977543  4455443333321123334555555555555433 111


Q ss_pred             cCCCCCCcceEEEEEecCCccccCCCCCCCCccccccccccccCCCCCCCchhhHhhhhhcCCCcEEEEEEEcCC----C
Q 007618          115 QCGACANDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNVYSVVVVNGG----G  190 (596)
Q Consensus       115 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ld~~~~~~~~~~~~~~vv~~~~~----~  190 (596)
                           ..+|++++.......|..+.  .....+.|..+..        .+...+++.+...+....++++++++.    +
T Consensus        80 -----~~~~~l~v~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  144 (517)
T PF10510_consen   80 -----FSNWSLQVKLYDESIDAEEA--ISESSAECLVLRV--------VPEELDEFSSYQLSPDSKETVVVYSPNSVPSP  144 (517)
T ss_pred             -----CceEEEEEEeccCCcchhhh--ccccchhhccccc--------ccccccccccccccCCCceEEEEECchhccCC
Confidence                 24899999999876654332  1112222221111        234445555566666677777777543    3


Q ss_pred             CcceEEecccceEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCccccccCCcccccCCCCcEEEEEEEecCCCCCcccc
Q 007618          191 EGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLIHGEFMPVGADRRIVLSFNLLNAEPNDWVYD  270 (596)
Q Consensus       191 ~~~~~vvg~~r~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~y~LsFSLLn~dp~~~~v~  270 (596)
                      +.++.++|+++++|++..         ......+.+.+.+.+.+...  .....|+++|+++|||+|||||+||+.+.++
T Consensus       145 ~~~~~~l~~~i~~~l~e~---------~~~~e~~~l~~~~~~~~~~~--~~~~~r~~~~s~~y~L~fSLLn~dp~~~~~~  213 (517)
T PF10510_consen  145 DTSSSVLGKFIAAWLVEE---------VFKEEWARLSQILSSSSDSE--DKINSRSVPYSPNYHLSFSLLNPDPSSHPVS  213 (517)
T ss_pred             CcchhhHHHHHHHHHHHH---------HHHHHHHHHHHHhccCCccc--cccccccccCCCceEEEEEEECCCCCcCcCc
Confidence            457789999999988832         22222333334332222211  2333589999999999999999999977799


Q ss_pred             cccHHHHHHhHHHHHHHhCCcceeEEEeeeEEecCCCCCcccccccceeeeecCCCCcccccCCccccccccCCCCCcee
Q 007618          271 WDFQRVDETLLAPIIKVLGPIANISVESQVLYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKIL  350 (596)
Q Consensus       271 Wdie~~~~~yl~P~l~~Ls~iaNFtV~SQVly~~~l~~~~~~d~~~~~~~l~~~~L~~fIN~~Ew~L~ss~s~~~~~p~L  350 (596)
                      |||++++++||+||+++|++++||||+|||+||+++...+.++++.++|+|+.++|++|||++||+|+++++   ..|+|
T Consensus       214 Wdi~~~i~~yl~P~l~~Ls~i~nftV~SQv~yya~l~~~~~~~~~~~~~~l~~~~Ls~fin~~ew~L~~~~~---~~p~l  290 (517)
T PF10510_consen  214 WDIESAIEEYLQPFLDSLSPIANFTVDSQVLYYAPLSVQPRWDEDSSSYYLSEEDLSHFINSAEWSLDSSIS---NDPTL  290 (517)
T ss_pred             CchHHHHHHHHHHHHHHhccceeeEEEEeEEeecCCCCCccccCCCCceeecHHHcccccCHhhcCCCCCCC---CCCeE
Confidence            999999999999999999999999999999999999998999988899999999999999999999999965   58999


Q ss_pred             EEEEEecCCCCCCceeeCCCCCccccceEEeccceEEEEECCCCCCCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhCC
Q 007618          351 QFVVYVPSAKECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVFMGQFRQLFGL  430 (596)
Q Consensus       351 nFvvyvPs~~~~PL~I~~~~g~~s~tnSFl~PqWGGV~I~N~~~~~~~~~~~~~~~~ls~~~L~~vm~~F~~qLr~LLGl  430 (596)
                      ||+||||+++++||+|++++|+.+.+|||++||||||+|+|++ |...  ..+...++++++|.++|++|++|||+|||+
T Consensus       291 nfvlyvP~~~~~PL~i~~~~g~~~~~nsfliPqWGgv~I~N~~-~~~~--~~~~~~~~~~~~l~~im~~F~~qL~~LLGl  367 (517)
T PF10510_consen  291 NFVLYVPSCEHSPLYIQDSDGSPSSTNSFLIPQWGGVVILNPP-CSVS--NNSSNPVLSEEDLQPIMETFLSQLRQLLGL  367 (517)
T ss_pred             EEEEEecCcccCCceEeCCCCCccccceEeeCCcceEEEECCc-cccc--cCCCCccccHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999888999999999999999999 4311  123456789999999999999999999999


Q ss_pred             CCCCCcCCCCCcccccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHHHHHH
Q 007618          431 KSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGSLSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQ  510 (596)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~g~~~wElD~L~R~rt~enl~~a~~TL~SL~kL~~~i~nm~I~d~V~~~V~~al~~i~~a~  510 (596)
                      ++.+...+...    .+...|+++||+|+|+|+|+++|+++|++||+||+||+++||||+|||+|+++|+.|++++++++
T Consensus       368 ~~~~~~~~~~~----~~~~~~~~~~eld~l~r~r~~~~l~~a~~TL~SL~~L~~~i~~i~I~~~V~~~v~~al~~l~~a~  443 (517)
T PF10510_consen  368 PSSPSSSGVTV----EPSSTGSPPWELDSLLRRRTVENLASASSTLQSLAKLLDSIPNIVIPDEVAERVQQALEALEQAI  443 (517)
T ss_pred             CCCCccccccc----cccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence            99876544432    23668999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCchhHHHHHHHHHHHHHHhcCCccccccccCCccceeEEEecchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007618          511 SNASLGDNESSAVSSGQARSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVSMHVLLAALREWKRYKQEKAK  584 (596)
Q Consensus       511 ~~~~~g~~~~al~~ar~A~~~SE~AFFDpsml~llYFPdEhK~AVYlPLf~Pv~vPlllslire~k~~~~~r~~  584 (596)
                      +.++.|+++.|+.+||+|+.+||+||||||||+|+|||||||||||+|||||+++|+++|++||+|+||++|+|
T Consensus       444 ~~l~~~~~~~al~~a~~a~~~ae~AFfd~sml~~lyFP~EhK~AVY~PLf~Pi~~pl~~~~~~~~k~~~~~rk~  517 (517)
T PF10510_consen  444 DALNNGDLEEALAHAREAFALAERAFFDPSMLQQLYFPDEHKYAVYLPLFGPISVPLLLGLLKELKEWRKRRKE  517 (517)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHhCCHhhhhhccCChhheeEeeehhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999985



Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI []. Mammalian GPI transamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for its function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear [].

>KOG2459 consensus GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07297 DPM2: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2); InterPro: IPR009914 This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query596
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 61.4 bits (148), Expect = 6e-10
 Identities = 81/551 (14%), Positives = 181/551 (32%), Gaps = 143/551 (25%)

Query: 139 HPTD---NSNYYRCGAISAV-------DFDFSNDDD--------DGVDELLESVLGVKNV 180
           H  D     + Y+   I +V       +FD  +  D        + +D ++ S   V   
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 181 YSV--VVVNGGGEGIRAVVG---KYRHAWIVGSVEEEEEESVLVSR-----------VAE 224
             +   +++   E ++  V    +  + +++  ++ E+ +  +++R             +
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 225 IFVKMFVNGGTE-----NGL----------IHGEFMPVGADRRIVLSFNLLNAEP----- 264
           +F K  V+           L          I G  +  G+ +   ++ ++  +       
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VL-GSGKT-WVALDVCLSYKVQCKM 180

Query: 265 NDWVYDW-DFQRV--DETLLAPIIKVLGPIA-NISVESQVLYHTPKSSFSYWDEKWKSYI 320
           +  ++ W + +     ET+L  + K+L  I  N +  S    +       +  +     +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI--HSIQAELRRL 237

Query: 321 FSTKDLPFFVNS--------NEWHLDTSIAAGGRSKIL------QFVVYVPSAKECPLSL 366
             +K      N         N    +   A     KIL      Q   ++ +A    +SL
Sbjct: 238 LKSKPYE---NCLLVLLNVQNAKAWN---AFNLSCKILLTTRFKQVTDFLSAATTTHISL 291

Query: 367 LLPTGEISKTNG---FISPMWGGVVVWNPPGCLNSE--TNHPSRHTM---SREDLQAVFE 418
              +  ++        +        +   P  L  E  T +P R ++   S  D  A ++
Sbjct: 292 DHHSMTLTPDEVKSLLLK------YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345

Query: 419 VFMGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTEWELDVLSRQFACFNLHSCATTLGS 478
                ++ +   K   + I +S    L P+       E   +  + + F   +   T   
Sbjct: 346 ----NWKHVNCDKLTTI-IESSLN-VLEPA-------EYRKMFDRLSVFPPSAHIPT-IL 391

Query: 479 LSRLVQSLPRMIIMDEIGKLVQFSLEAAKLAQSNASLGDNESSAVS--SGQ---ARSLAE 533
           LS +   + +  +M  + KL ++SL   K           + S +S  S        L  
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSL-VEK---------QPKESTISIPSIYLELKVKLEN 441

Query: 534 DAFFHPSIMSISYYSFEHCFAIYSP--------FFLPVSMHVLLAALREWKRYKQEKAKY 585
           +   H SI  + +Y+    F             F+  +  H  L  +   +R    +  +
Sbjct: 442 EYALHRSI--VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--LKNIEHPERMTLFRMVF 497

Query: 586 T--AW-KAKVK 593
               + + K++
Sbjct: 498 LDFRFLEQKIR 508


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00