Citrus Sinensis ID: 007769
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| 255561959 | 585 | conserved hypothetical protein [Ricinus | 0.991 | 1.0 | 0.766 | 0.0 | |
| 302143593 | 563 | unnamed protein product [Vitis vinifera] | 0.954 | 1.0 | 0.732 | 0.0 | |
| 225465601 | 550 | PREDICTED: uncharacterized protein LOC10 | 0.932 | 1.0 | 0.711 | 0.0 | |
| 356574880 | 592 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.996 | 0.697 | 0.0 | |
| 356535200 | 592 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.996 | 0.680 | 0.0 | |
| 449470222 | 539 | PREDICTED: uncharacterized protein LOC10 | 0.911 | 0.998 | 0.670 | 0.0 | |
| 357441397 | 584 | hypothetical protein MTR_1g080320 [Medic | 0.986 | 0.996 | 0.668 | 0.0 | |
| 356504121 | 554 | PREDICTED: uncharacterized protein LOC10 | 0.922 | 0.981 | 0.648 | 0.0 | |
| 297813153 | 533 | hypothetical protein ARALYDRAFT_489671 [ | 0.898 | 0.994 | 0.633 | 0.0 | |
| 79328978 | 535 | uncharacterized protein [Arabidopsis tha | 0.906 | 1.0 | 0.630 | 0.0 |
| >gi|255561959|ref|XP_002521988.1| conserved hypothetical protein [Ricinus communis] gi|223538792|gb|EEF40392.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/590 (76%), Positives = 507/590 (85%), Gaps = 5/590 (0%)
Query: 1 MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISF 60
ME + +KSLERVVSQRALQM SSFPCQ+CVVGFLCGVCL +LFLAALTS G+F F GISF
Sbjct: 1 MEPLGRKSLERVVSQRALQMSSSFPCQLCVVGFLCGVCLTSLFLAALTSLGTFAFGGISF 60
Query: 61 SMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGA 120
S + SSPWNSSS+ IN+ STDCK KL ETERW +SQR T +E+VSLLH W A
Sbjct: 61 SAVSIRNSSPWNSSSEFINVAASTDCKFKLMETERWDDSQR----THDEKVSLLHSAWSA 116
Query: 121 LLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGL 180
LL+ESV E E GL++S+VPN PHLENCKLSA IN RLD +AENESFPPWT KGL
Sbjct: 117 LLSESVDVEFENFQNLGLSKSAVPNGPHLENCKLSAQINKRLDKQAENESFPPWTTWKGL 176
Query: 181 LDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDP 240
LDM+PASTA EQL RH+ ISEG YPPWI+GSDE+NYPLTRKVQRDIW+HQHPPNC DP
Sbjct: 177 LDMHPASTANEQLRYYRHQAISEGAYPPWISGSDEDNYPLTRKVQRDIWIHQHPPNCKDP 236
Query: 241 NVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWS 300
NV+FLVADWE+LPGFGIGAQ+ GM GLLAIA+ +KRVLVT+YYNRADHDGCKG+SRSSWS
Sbjct: 237 NVKFLVADWEKLPGFGIGAQLVGMSGLLAIALKDKRVLVTSYYNRADHDGCKGTSRSSWS 296
Query: 301 CYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPT 360
CYF PETSQECRD A ELM NKEA E G ITTK+NY+SK+IW GR PR+WGDPWSYLQPT
Sbjct: 297 CYFFPETSQECRDHALELMANKEAWENGSITTKENYNSKEIWTGRTPRIWGDPWSYLQPT 356
Query: 361 TEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLP 420
TEING+LI +H KMDRRWWRAQA+RYLMRF TEYTCGL+NVAR+AAFGKE AKMVL L
Sbjct: 357 TEINGSLITFHHKMDRRWWRAQAIRYLMRFQTEYTCGLMNVARNAAFGKEVAKMVLASLE 416
Query: 421 REWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADR 480
+WP EV N SDI+ FVWSSH+PW+PRP+LSMHVRMGDKACEMKVVEFE+YM LAD+
Sbjct: 417 DKWPK-EVTNKPVSDIQRFVWSSHKPWVPRPLLSMHVRMGDKACEMKVVEFEEYMHLADQ 475
Query: 481 IRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTN 540
+R+ FPHLNSIWLSTEMQEV+DK + Y W FY++NVTRQVGN TMA YEASLGR+TSTN
Sbjct: 476 LRRQFPHLNSIWLSTEMQEVIDKLEKYTDWKFYYSNVTRQVGNTTMAEYEASLGRQTSTN 535
Query: 541 YPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW 590
YPLVNFLMAT++DFFIGALGSTWCFLIDGMRNTGGKVM+GYLSVN+DRFW
Sbjct: 536 YPLVNFLMATEADFFIGALGSTWCFLIDGMRNTGGKVMAGYLSVNRDRFW 585
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143593|emb|CBI22346.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225465601|ref|XP_002266371.1| PREDICTED: uncharacterized protein LOC100261475 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356574880|ref|XP_003555571.1| PREDICTED: uncharacterized protein LOC100814689 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356535200|ref|XP_003536136.1| PREDICTED: uncharacterized protein LOC100789833 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449470222|ref|XP_004152817.1| PREDICTED: uncharacterized protein LOC101206485 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357441397|ref|XP_003590976.1| hypothetical protein MTR_1g080320 [Medicago truncatula] gi|355480024|gb|AES61227.1| hypothetical protein MTR_1g080320 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356504121|ref|XP_003520847.1| PREDICTED: uncharacterized protein LOC100802896 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297813153|ref|XP_002874460.1| hypothetical protein ARALYDRAFT_489671 [Arabidopsis lyrata subsp. lyrata] gi|297320297|gb|EFH50719.1| hypothetical protein ARALYDRAFT_489671 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|79328978|ref|NP_001031963.1| uncharacterized protein [Arabidopsis thaliana] gi|48525345|gb|AAT44974.1| At5g28910 [Arabidopsis thaliana] gi|332006467|gb|AED93850.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| TAIR|locus:2148715 | 535 | AT5G28910 "AT5G28910" [Arabido | 0.644 | 0.710 | 0.734 | 6.7e-197 | |
| TAIR|locus:2148695 | 536 | AT5G28960 "AT5G28960" [Arabido | 0.655 | 0.722 | 0.705 | 1.7e-187 |
| TAIR|locus:2148715 AT5G28910 "AT5G28910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1580 (561.2 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
Identities = 282/384 (73%), Positives = 327/384 (85%)
Query: 207 PPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCG 266
PPWI+G DEENYPLTR+VQRDIW+HQHP +C + +++FLVADWE LPGFGIGAQIAGM G
Sbjct: 156 PPWISGGDEENYPLTRRVQRDIWIHQHPLDCGNKSLKFLVADWETLPGFGIGAQIAGMTG 215
Query: 267 LLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALE 326
LLAIAINE RVLV NYYNRADHDGCKGS R +WSCYFL ETS+ECR RAF ++ +EA E
Sbjct: 216 LLAIAINENRVLVANYYNRADHDGCKGSFRGNWSCYFLQETSEECRKRAFAIVKKREAWE 275
Query: 327 KGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRY 386
GI+T K NYS+K+IWAG P+ WG PWSY++PTTEING+LI+ HRKMDRRWWRAQAVRY
Sbjct: 276 SGIVTGKQNYSTKEIWAGAIPKQWGKPWSYMKPTTEINGSLISNHRKMDRRWWRAQAVRY 335
Query: 387 LMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRP 446
LMR+ TEYTCGL+N+AR++AFGKEAAK+VL+ +W ++IE+ VWS H+P
Sbjct: 336 LMRYQTEYTCGLMNIARNSAFGKEAAKIVLSA--GDWRKKN--KKMRTEIEEQVWSDHKP 391
Query: 447 WIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKL 506
W+PRPMLS+HVRMGDKACEM+V E+YM LADRIR FP LN IWLSTEM+EVVD+SK
Sbjct: 392 WLPRPMLSVHVRMGDKACEMRVAALEEYMHLADRIRDRFPELNRIWLSTEMKEVVDRSKD 451
Query: 507 YPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFL 566
Y HW FY+T V RQVGN +MA YEASLGRE STNYPLVNFLMA+++DFF+GALGSTWCFL
Sbjct: 452 YAHWRFYYTEVARQVGNKSMAEYEASLGREMSTNYPLVNFLMASEADFFVGALGSTWCFL 511
Query: 567 IDGMRNTGGKVMSGYLSVNKDRFW 590
IDGMRNTGGKVMSGYLSVNKDRFW
Sbjct: 512 IDGMRNTGGKVMSGYLSVNKDRFW 535
|
|
| TAIR|locus:2148695 AT5G28960 "AT5G28960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00032880001 | SubName- Full=Chromosome undetermined scaffold_62, whole genome shotgun sequence; (508 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| cd11300 | 328 | cd11300, Fut8_like, Alpha 1-6-fucosyltransferase | 5e-07 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 3e-06 |
| >gnl|CDD|211386 cd11300, Fut8_like, Alpha 1-6-fucosyltransferase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 5e-07
Identities = 45/175 (25%), Positives = 65/175 (37%), Gaps = 27/175 (15%)
Query: 220 LTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLV 279
L++ VQ+ I Q+P +C + LV + + GFG C ++A N R L+
Sbjct: 14 LSKLVQKRIHKLQNPKDC--SKAKKLVCNLNKGCGFGCQLHHVVYCLIVAYGTN--RTLI 69
Query: 280 TNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSK 339
D G S W FLP S+ C DR + A+ T D K
Sbjct: 70 L------DSKGW-RYSPGGWEKVFLP-LSETCTDR----SGDNTAVWWWEPTNSDVQVVK 117
Query: 340 QIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 390
P + P+ L ++ L H R WW Q ++YLMR
Sbjct: 118 ------LPIIDSLHSRPPFLPLAVPEDLAERLERLHGD-PRVWWIGQLLKYLMRP 165
|
Alpha 1,6-fucosyltransferase (Fut8) transfers a fucose moiety from GDP-fucose to the reducing terminal N-acetylglucosamine of the core structure of Asn-linked oligosaccharides, in a process termed core fucosylation. Core fucosylation is essential for the function of growth factor receptors. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 328 |
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| KOG3705 | 580 | consensus Glycoprotein 6-alpha-L-fucosyltransferas | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 99.65 | |
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 98.99 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 98.32 | |
| PF03254 | 476 | XG_FTase: Xyloglucan fucosyltransferase; InterPro: | 97.75 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 96.93 |
| >KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-81 Score=650.50 Aligned_cols=313 Identities=21% Similarity=0.329 Sum_probs=271.5
Q ss_pred CCCCCCCCcccCCcCCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeeccCCCcchhHHHHHHHHHHHHHHhcCcEEEE
Q 007769 201 ISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVT 280 (590)
Q Consensus 201 ~~~~~~p~wi~g~dee~~pLT~~vQr~I~~~QNP~DCs~A~~KfLvc~~~~~cGfGcg~H~v~~C~~L~lA~~tgRtLIl 280 (590)
...+|+..|+ .+|...||++|||||.++|||+||++| |+|||+++++|||||++||++||+| +||+|.||||+
T Consensus 177 ~q~dG~e~wR---~Kea~dlt~lvqrri~~LQNPkdCs~A--kkLVCnlnKgCGyGCQLHHVvYCfi--~AyaTqRtliL 249 (580)
T KOG3705|consen 177 EQLDGSEEWR---FKEATDLTQLVQRRIEKLQNPKDCSEA--KKLVCNLNKGCGYGCQLHHVVYCFI--TAYATQRTLIL 249 (580)
T ss_pred HhccCcHHHH---HhHHhHHHHHHHHHHHHhcChHhhHHH--hhheeeccCCcccccceeeeeEeee--eeeecceEEEE
Confidence 3568999999 489999999999999999999999999 9999999999999999999999999 99999999999
Q ss_pred eCCCCcCCCCCCCCCCCCCccccccCCccccccchhc----cccchhhhccCcEEe--ccCCCCcccccCCCCCCCCCCC
Q 007769 281 NYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFE----LMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPW 354 (590)
Q Consensus 281 d~~~~~~h~Gc~g~~~~~WscyF~P~sS~~C~~~a~e----~~~~~~~~~~~Vv~~--~~~~~~~~~f~g~~P~p~~~P~ 354 (590)
++.+|.|+.| ||+.+|.|. |+.|.++++. |...... ..+||.+ .|++.++|+|+ |.++|+
T Consensus 250 ks~gWrY~~g-------GWe~VF~pv-S~~c~D~~~~nT~~wpg~~~~-n~qVv~LpIvDSL~prPpyL-----PlAVPE 315 (580)
T KOG3705|consen 250 KSDGWRYSSG-------GWESVFKPV-SKCCFDEAVGNTEAWPGAEPS-NAQVVSLPIVDSLIPRPPYL-----PLAVPE 315 (580)
T ss_pred ecCCceecCC-------Chhhhhhhh-hhcccccccccccCCCCCCCC-CceEEEeecccccCCCCCCc-----cccCcH
Confidence 9999988765 799999885 8999998653 3322111 2456666 78899999999 999999
Q ss_pred cccccccccccchhhhcccchhhHHHHHHHHHHhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCccccccCCCcc
Q 007769 355 SYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGS 434 (590)
Q Consensus 355 ~~~~~l~~lhG~p~~~~~~~~~~WW~gQ~~~YLmRp~~e~l~~Lln~~R~~afG~~aa~~v~~~l~~~w~~~~~~~~~~~ 434 (590)
+++++++++||+| .+||+||+++||||||+.+- +.|+++ -+
T Consensus 316 dLa~rL~rlHgdP--------~vwwVgqFikYL~Rpqp~t~-~~l~~a------------------------------~k 356 (580)
T KOG3705|consen 316 DLAERLTRLHGDP--------PVWWVGQFIKYLMRPQPATQ-EKLDKA------------------------------LK 356 (580)
T ss_pred HHHHHHHHhcCCC--------ceeeHHHHHHHHhCCChhhH-HHHHHH------------------------------HH
Confidence 9999999999999 99999999999999999443 333321 12
Q ss_pred chhhhhhcCCCCCCCCCeEEEEEcCCccc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCchHHHHHhc-cC
Q 007769 435 DIEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LY 507 (590)
Q Consensus 435 ~i~e~V~s~~kp~~p~PiVGVHVRrGDK~-~Ea~~~~~eeYM~~Ve~~~~-----~~p~~rrIFLATDDp~Vi~Eak-kY 507 (590)
.|+ +.+||||||||||||+ +||++|+++|||.+||.+++ ..|..||||||||||+|++|+| +|
T Consensus 357 ~lg----------~~~PivGvhvRRTDKVGTEAAfH~~eEYM~~vE~~f~~le~rg~~~~rRiflAsDDp~vv~EAk~kY 426 (580)
T KOG3705|consen 357 SLG----------LDKPIVGVHVRRTDKVGTEAAFHALEEYMEWVEIWFKVLEKRGKPLERRIFLASDDPTVVPEAKNKY 426 (580)
T ss_pred hCC----------CCCceeeEEEEecccccchhhhhhHHHHHHHHHHHHHHHHHhCCchhheEEEecCCchhchHhhccC
Confidence 333 7889999999999998 69999999999999998875 3567899999999999999999 99
Q ss_pred CCceEEeec-cccccCCchHHHHhhhhCCCcccchHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhcCC-Cccccceecc
Q 007769 508 PHWNFYFTN-VTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVN 585 (590)
Q Consensus 508 p~y~fy~t~-I~r~~g~~s~a~y~~~~g~~~sl~~iLvDl~LLseCDyfVGTfSSnv~RLi~ELRqt~g-ka~a~F~Svd 585 (590)
|+|.|+.++ |.+. +....++++++++++++||++||.+||+||||||||||++||+|||.| |+.+.|+|+|
T Consensus 427 PnYe~igd~eia~~-------A~l~nRYTd~sL~GvIlDIh~LS~~d~LVCTFSSQVCRvaYEimQt~~pDa~~~FhSLD 499 (580)
T KOG3705|consen 427 PNYEVIGDTEIAKT-------AQLNNRYTDASLMGVILDIHILSKVDYLVCTFSSQVCRVAYEIMQTSGPDAGSKFHSLD 499 (580)
T ss_pred CCcEEeccHHHHHH-------hhccccchhhhhhheeeeeeeecccceEEEechHHHHHHHHHHHhccCCCccccccccc
Confidence 999996443 3222 223445588899999999999999999999999999999999999998 9999999999
Q ss_pred CCCCC
Q 007769 586 KDRFW 590 (590)
Q Consensus 586 ~~~~~ 590 (590)
||||+
T Consensus 500 DIYYf 504 (580)
T KOG3705|consen 500 DIYYF 504 (580)
T ss_pred ceeee
Confidence 99984
|
|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 1e-47 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 1e-47
Identities = 70/387 (18%), Positives = 126/387 (32%), Gaps = 81/387 (20%)
Query: 215 EENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINE 274
+E LT VQR I Q+P +C + LV + + G+G Q+ + IA
Sbjct: 120 KEAKDLTELVQRRITYLQNPKDC--SKAKKLVCNINKGCGYG--CQLHHVVYCFMIAYGT 175
Query: 275 KRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKD 334
+R L+ N G W F P S+ C DR+ +
Sbjct: 176 QRTLILESQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHW----------SG 217
Query: 335 NYSSKQIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 390
K + P V P+ L ++ L+ H WW +Q V+YL+R
Sbjct: 218 EVKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHG-DPAVWWVSQFVKYLIRP 276
Query: 391 LTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPR 450
+ + A
Sbjct: 277 -QPWLEKEIEEATKKLG----------------------------------------FKH 295
Query: 451 PMLSMHVRMGDK-ACEMKVVEFEKYMLLAD-----RIRKHFPHLNSIWLSTEMQEVVDKS 504
P++ +HVR DK E E+YM+ + R+ ++L+T+ ++ ++
Sbjct: 296 PVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEA 355
Query: 505 K-LYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTW 563
K YP++ F N +++ + + E S +++ + +DF + S
Sbjct: 356 KTKYPNYEFISDN------SISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQV 409
Query: 564 CFLIDGMRNTGGKVMSGYLSVNKDRFW 590
C + + T S D ++
Sbjct: 410 CRVAYEIMQTLHPDASANFHSLDDIYY 436
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 100.0 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 99.81 | |
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.02 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.75 |
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-61 Score=524.06 Aligned_cols=314 Identities=21% Similarity=0.334 Sum_probs=252.8
Q ss_pred CCCCCCCcccCCcCCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeeccCCCcchhHHHHHHHHHHHHHHhcCcEEEEe
Q 007769 202 SEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTN 281 (590)
Q Consensus 202 ~~~~~p~wi~g~dee~~pLT~~vQr~I~~~QNP~DCs~A~~KfLvc~~~~~cGfGcg~H~v~~C~~L~lA~~tgRtLIld 281 (590)
+.+++..|+ ..+++|||++||++||.||||+||++| |||+|+++..|||||.+|++++|++ +|+++|||||+|
T Consensus 110 ~~~g~~~~r---~~~~~~lt~~vq~~i~~~QnP~~Cs~a--K~Lv~~~~~~~GfGs~lh~l~~~L~--~A~~~~Rtliid 182 (526)
T 2de0_X 110 QTDGAGDWR---EKEAKDLTELVQRRITYLQNPKDCSKA--KKLVCNINKGCGYGCQLHHVVYCFM--IAYGTQRTLILE 182 (526)
T ss_dssp HTTTHHHHH---HHHHHHHHHHHHHHHHHHHCCSCGGGS--CEEEEECCCSSCHHHHHHHHHHHHH--HHHHHTCEEEEE
T ss_pred hhhchhHHH---HHHHHHHHHHHHHHHHHhcCCCcCCCC--CEEEEEecCCCchHHHHHHHHHHHH--HHHhhCCEEEEE
Confidence 456677777 488999999999999999999999999 9999999889999999999999999 999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCccccccCCccccccch----hccccchhhhccCcEEe--ccCCCCcccccCCCCCCCCCCCc
Q 007769 282 YYNRADHDGCKGSSRSSWSCYFLPETSQECRDRA----FELMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPWS 355 (590)
Q Consensus 282 ~~~~~~h~Gc~g~~~~~WscyF~P~sS~~C~~~a----~e~~~~~~~~~~~Vv~~--~~~~~~~~~f~g~~P~p~~~P~~ 355 (590)
+.+|.+++| +|+|||.| .|++|..+. ..|.......+..||.. .+++.+.++|. |+++|.+
T Consensus 183 d~~w~Y~~g-------~w~~yF~P-~s~~C~~~~~~~~~~w~~~~~~~~~~vV~~~~i~~~~~~~~~~-----~~~~P~~ 249 (526)
T 2de0_X 183 SQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPRPPYL-----PLAVPED 249 (526)
T ss_dssp CTTCSSCTT-------CGGGTBCC-SCSSCCCCCCSCCCBCCCTTGGGGCSEEEECCGGGCSSCCSCC-----TTCEEGG
T ss_pred CCCCCcCCC-------CHHHhhhC-cCccccCCCccccCCCCCcccCCCcceEEeecccccccccccc-----ccccchh
Confidence 999876533 59999999 589998862 22332211123456654 34455555665 6689999
Q ss_pred ccccccccccchhhhcccchhhHHHHHHHHHHhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCccccccCCCccc
Q 007769 356 YLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD 435 (590)
Q Consensus 356 ~~~~l~~lhG~p~~~~~~~~~~WW~gQ~~~YLmRp~~e~l~~Lln~~R~~afG~~aa~~v~~~l~~~w~~~~~~~~~~~~ 435 (590)
..+.+..+||+| ++||+||+++|||||++++ ++.+++.+. +
T Consensus 250 ~~~~L~~l~~dp--------~~w~~~q~~~yl~rP~~~i-~~~I~~~~~------------------------------~ 290 (526)
T 2de0_X 250 LADRLVRVHGDP--------AVWWVSQFVKYLIRPQPWL-EKEIEEATK------------------------------K 290 (526)
T ss_dssp GHHHHHHHCSCH--------HHHHHHHHHHHHTCBCHHH-HHHHHHHHH------------------------------H
T ss_pred HHHHHHhccCCc--------HHHHHHHHHHHHcCCCHHH-HHHHHHHHH------------------------------H
Confidence 999999999999 9999999999999999965 455555331 2
Q ss_pred hhhhhhcCCCCCCCCCeEEEEEcCCccc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCchHHHHHhc-cCC
Q 007769 436 IEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LYP 508 (590)
Q Consensus 436 i~e~V~s~~kp~~p~PiVGVHVRrGDK~-~Ea~~~~~eeYM~~Ve~~~~-----~~p~~rrIFLATDDp~Vi~Eak-kYp 508 (590)
++ ++.|+||||||||||+ .|+.++++++||++|++|++ ..+..++||||||||+|+++++ +||
T Consensus 291 l~----------~~~piVGVHIRrGDk~~~E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDDp~v~~e~k~~~p 360 (526)
T 2de0_X 291 LG----------FKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYP 360 (526)
T ss_dssp HT----------CCSSEEEEEECCC-----CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESCHHHHHHHHHHCT
T ss_pred hC----------CCCCEEEEEEeCCCCCccccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCCHHHHHHHHHhCC
Confidence 22 5889999999999995 69999999999999998876 3556789999999999999999 799
Q ss_pred CceEEeeccccccCCchHHHHhhhhCCCcccchHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhcCC-CccccceeccCC
Q 007769 509 HWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVNKD 587 (590)
Q Consensus 509 ~y~fy~t~I~r~~g~~s~a~y~~~~g~~~sl~~iLvDl~LLseCDyfVGTfSSnv~RLi~ELRqt~g-ka~a~F~Svd~~ 587 (590)
+|+|+.+. ... .+ +. ...+.+.+++.++++|++||++|||||||+||||||++++||++.+ ++...|.|+|++
T Consensus 361 ~~~~~~d~-~~~---~~-a~-~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~~l~~~~~~~~~~~~~SLD~~ 434 (526)
T 2de0_X 361 NYEFISDN-SIS---WS-AG-LHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDI 434 (526)
T ss_dssp TSEEECCC-CSS---CS-SG-GGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHHHHHTTSSSCCTTCEEESSCC
T ss_pred CCEEecCc-ccc---cc-cC-ccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHHHHhcCcCccccccccCCccc
Confidence 99986322 111 10 00 1222356678999999999999999999999999999999999987 788899999999
Q ss_pred CCC
Q 007769 588 RFW 590 (590)
Q Consensus 588 ~~~ 590 (590)
+.|
T Consensus 435 ~~~ 437 (526)
T 2de0_X 435 YYF 437 (526)
T ss_dssp SCC
T ss_pred ccc
Confidence 865
|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00