Citrus Sinensis ID: 007769


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590
MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW
ccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccEEEcccccHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHcccccccHHHHHHHcccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHccccEEEEEEEEEEEcccccHHHHHHHccccccccHHHHHHHHHHccccEEEEcccHHHHHHHHHHHccccccccEEEEcccccc
cccccccHHHHHHHHHHHHHccccccEEEEEEHHHHHHHHHHHHHHccccccEccccEEEcccccccccccccccHcccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccHHcHHHHHHHHHHHcccccccccccHHHHHHcccccccccHHHHHHHHccccccccccccEEccccccccHHHHHHHHHHHccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccEEEEcccccHHHHHHHHHHHHcHHHHHcccEEccccccccEEEcccccccccccHHcccccccccccHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHccccccccccEEEEEEEccccccEEEEEcHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHccccEEEEEEcccccccccHHHHHHHcccccccccHHHHHHHHHHccEEEEcccccHHHHHHHHHcccccEEEEEEEEcccccc
MEAMNQKSLERVVSQRAlqmgssfpcqicvVGFLCGVCLATLFLAALtsfgsfdfngisfsmgassasspwnsssdaiNMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLKFglnqssvpnaphlencklsAYINMRLdtraenesfppwtnrkglldmypastakeqlgsprhrpisegvyppwitgsdeenypltrkvQRDIwvhqhppncwdpnvrFLVADwerlpgfgigaQIAGMCGLLAIAINEKRVLVTNyynradhdgckgssrsswscyflpetsqECRDRAFELMDNKEALEKGIIttkdnysskqiwagraprvwgdpwsylqptteiNGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTglprewpnvevannsgsdiedfvwsshrpwiprpmlsmhvrmgdkACEMKVVEFEKYMLLADRIRKhfphlnsiwLSTEMQEvvdksklyphwnfyftNVTRQVGNMTMAIYEASlgretstnyplvnflmatdsdffIGALGSTWCFLIDGMrntggkvmsgylsvnkdrfw
MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWfnsqrstmetdnerVSLLHLVWGALLTESVHEEREFLLKFGlnqssvpnaphlenCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKeqlgsprhrpiSEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRadhdgckgssrssWSCYFLPETSQECRDRAFELMDNKEALEKgiittkdnysskqiWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNtggkvmsgylsvnkdrfw
MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVClatlflaaltSFGSFDFNGIsfsmgassasspwnsssdaINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW
*******************MGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFS**************************L*******WF************RVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDT*********W*****************************GVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLS*******
***************RALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMGASS***PWNSSSDAINMVKST****************************LLHLVWGALL*************************HLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMY********************************NYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRD**********************YSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVE**********DFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGN**********GRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW
**********RVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMG***********SDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHD********SWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW
*******************MGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWF********TDNERVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNV******GSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRF*
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISFSMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query590
255561959585 conserved hypothetical protein [Ricinus 0.991 1.0 0.766 0.0
302143593563 unnamed protein product [Vitis vinifera] 0.954 1.0 0.732 0.0
225465601550 PREDICTED: uncharacterized protein LOC10 0.932 1.0 0.711 0.0
356574880592 PREDICTED: uncharacterized protein LOC10 1.0 0.996 0.697 0.0
356535200592 PREDICTED: uncharacterized protein LOC10 1.0 0.996 0.680 0.0
449470222539 PREDICTED: uncharacterized protein LOC10 0.911 0.998 0.670 0.0
357441397584 hypothetical protein MTR_1g080320 [Medic 0.986 0.996 0.668 0.0
356504121554 PREDICTED: uncharacterized protein LOC10 0.922 0.981 0.648 0.0
297813153533 hypothetical protein ARALYDRAFT_489671 [ 0.898 0.994 0.633 0.0
79328978535 uncharacterized protein [Arabidopsis tha 0.906 1.0 0.630 0.0
>gi|255561959|ref|XP_002521988.1| conserved hypothetical protein [Ricinus communis] gi|223538792|gb|EEF40392.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/590 (76%), Positives = 507/590 (85%), Gaps = 5/590 (0%)

Query: 1   MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISF 60
           ME + +KSLERVVSQRALQM SSFPCQ+CVVGFLCGVCL +LFLAALTS G+F F GISF
Sbjct: 1   MEPLGRKSLERVVSQRALQMSSSFPCQLCVVGFLCGVCLTSLFLAALTSLGTFAFGGISF 60

Query: 61  SMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGA 120
           S  +   SSPWNSSS+ IN+  STDCK KL ETERW +SQR    T +E+VSLLH  W A
Sbjct: 61  SAVSIRNSSPWNSSSEFINVAASTDCKFKLMETERWDDSQR----THDEKVSLLHSAWSA 116

Query: 121 LLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGL 180
           LL+ESV  E E     GL++S+VPN PHLENCKLSA IN RLD +AENESFPPWT  KGL
Sbjct: 117 LLSESVDVEFENFQNLGLSKSAVPNGPHLENCKLSAQINKRLDKQAENESFPPWTTWKGL 176

Query: 181 LDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDP 240
           LDM+PASTA EQL   RH+ ISEG YPPWI+GSDE+NYPLTRKVQRDIW+HQHPPNC DP
Sbjct: 177 LDMHPASTANEQLRYYRHQAISEGAYPPWISGSDEDNYPLTRKVQRDIWIHQHPPNCKDP 236

Query: 241 NVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWS 300
           NV+FLVADWE+LPGFGIGAQ+ GM GLLAIA+ +KRVLVT+YYNRADHDGCKG+SRSSWS
Sbjct: 237 NVKFLVADWEKLPGFGIGAQLVGMSGLLAIALKDKRVLVTSYYNRADHDGCKGTSRSSWS 296

Query: 301 CYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPT 360
           CYF PETSQECRD A ELM NKEA E G ITTK+NY+SK+IW GR PR+WGDPWSYLQPT
Sbjct: 297 CYFFPETSQECRDHALELMANKEAWENGSITTKENYNSKEIWTGRTPRIWGDPWSYLQPT 356

Query: 361 TEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLP 420
           TEING+LI +H KMDRRWWRAQA+RYLMRF TEYTCGL+NVAR+AAFGKE AKMVL  L 
Sbjct: 357 TEINGSLITFHHKMDRRWWRAQAIRYLMRFQTEYTCGLMNVARNAAFGKEVAKMVLASLE 416

Query: 421 REWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADR 480
            +WP  EV N   SDI+ FVWSSH+PW+PRP+LSMHVRMGDKACEMKVVEFE+YM LAD+
Sbjct: 417 DKWPK-EVTNKPVSDIQRFVWSSHKPWVPRPLLSMHVRMGDKACEMKVVEFEEYMHLADQ 475

Query: 481 IRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTN 540
           +R+ FPHLNSIWLSTEMQEV+DK + Y  W FY++NVTRQVGN TMA YEASLGR+TSTN
Sbjct: 476 LRRQFPHLNSIWLSTEMQEVIDKLEKYTDWKFYYSNVTRQVGNTTMAEYEASLGRQTSTN 535

Query: 541 YPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW 590
           YPLVNFLMAT++DFFIGALGSTWCFLIDGMRNTGGKVM+GYLSVN+DRFW
Sbjct: 536 YPLVNFLMATEADFFIGALGSTWCFLIDGMRNTGGKVMAGYLSVNRDRFW 585




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143593|emb|CBI22346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465601|ref|XP_002266371.1| PREDICTED: uncharacterized protein LOC100261475 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574880|ref|XP_003555571.1| PREDICTED: uncharacterized protein LOC100814689 [Glycine max] Back     alignment and taxonomy information
>gi|356535200|ref|XP_003536136.1| PREDICTED: uncharacterized protein LOC100789833 [Glycine max] Back     alignment and taxonomy information
>gi|449470222|ref|XP_004152817.1| PREDICTED: uncharacterized protein LOC101206485 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357441397|ref|XP_003590976.1| hypothetical protein MTR_1g080320 [Medicago truncatula] gi|355480024|gb|AES61227.1| hypothetical protein MTR_1g080320 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356504121|ref|XP_003520847.1| PREDICTED: uncharacterized protein LOC100802896 [Glycine max] Back     alignment and taxonomy information
>gi|297813153|ref|XP_002874460.1| hypothetical protein ARALYDRAFT_489671 [Arabidopsis lyrata subsp. lyrata] gi|297320297|gb|EFH50719.1| hypothetical protein ARALYDRAFT_489671 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79328978|ref|NP_001031963.1| uncharacterized protein [Arabidopsis thaliana] gi|48525345|gb|AAT44974.1| At5g28910 [Arabidopsis thaliana] gi|332006467|gb|AED93850.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query590
TAIR|locus:2148715535 AT5G28910 "AT5G28910" [Arabido 0.644 0.710 0.734 6.7e-197
TAIR|locus:2148695536 AT5G28960 "AT5G28960" [Arabido 0.655 0.722 0.705 1.7e-187
TAIR|locus:2148715 AT5G28910 "AT5G28910" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1580 (561.2 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
 Identities = 282/384 (73%), Positives = 327/384 (85%)

Query:   207 PPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCG 266
             PPWI+G DEENYPLTR+VQRDIW+HQHP +C + +++FLVADWE LPGFGIGAQIAGM G
Sbjct:   156 PPWISGGDEENYPLTRRVQRDIWIHQHPLDCGNKSLKFLVADWETLPGFGIGAQIAGMTG 215

Query:   267 LLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALE 326
             LLAIAINE RVLV NYYNRADHDGCKGS R +WSCYFL ETS+ECR RAF ++  +EA E
Sbjct:   216 LLAIAINENRVLVANYYNRADHDGCKGSFRGNWSCYFLQETSEECRKRAFAIVKKREAWE 275

Query:   327 KGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRY 386
              GI+T K NYS+K+IWAG  P+ WG PWSY++PTTEING+LI+ HRKMDRRWWRAQAVRY
Sbjct:   276 SGIVTGKQNYSTKEIWAGAIPKQWGKPWSYMKPTTEINGSLISNHRKMDRRWWRAQAVRY 335

Query:   387 LMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRP 446
             LMR+ TEYTCGL+N+AR++AFGKEAAK+VL+    +W          ++IE+ VWS H+P
Sbjct:   336 LMRYQTEYTCGLMNIARNSAFGKEAAKIVLSA--GDWRKKN--KKMRTEIEEQVWSDHKP 391

Query:   447 WIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKL 506
             W+PRPMLS+HVRMGDKACEM+V   E+YM LADRIR  FP LN IWLSTEM+EVVD+SK 
Sbjct:   392 WLPRPMLSVHVRMGDKACEMRVAALEEYMHLADRIRDRFPELNRIWLSTEMKEVVDRSKD 451

Query:   507 YPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFL 566
             Y HW FY+T V RQVGN +MA YEASLGRE STNYPLVNFLMA+++DFF+GALGSTWCFL
Sbjct:   452 YAHWRFYYTEVARQVGNKSMAEYEASLGREMSTNYPLVNFLMASEADFFVGALGSTWCFL 511

Query:   567 IDGMRNTGGKVMSGYLSVNKDRFW 590
             IDGMRNTGGKVMSGYLSVNKDRFW
Sbjct:   512 IDGMRNTGGKVMSGYLSVNKDRFW 535


GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2148695 AT5G28960 "AT5G28960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00032880001
SubName- Full=Chromosome undetermined scaffold_62, whole genome shotgun sequence; (508 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query590
cd11300328 cd11300, Fut8_like, Alpha 1-6-fucosyltransferase 5e-07
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 3e-06
>gnl|CDD|211386 cd11300, Fut8_like, Alpha 1-6-fucosyltransferase Back     alignment and domain information
 Score = 51.5 bits (124), Expect = 5e-07
 Identities = 45/175 (25%), Positives = 65/175 (37%), Gaps = 27/175 (15%)

Query: 220 LTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLV 279
           L++ VQ+ I   Q+P +C     + LV +  +  GFG        C ++A   N  R L+
Sbjct: 14  LSKLVQKRIHKLQNPKDC--SKAKKLVCNLNKGCGFGCQLHHVVYCLIVAYGTN--RTLI 69

Query: 280 TNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSK 339
                  D  G    S   W   FLP  S+ C DR      +  A+     T  D    K
Sbjct: 70  L------DSKGW-RYSPGGWEKVFLP-LSETCTDR----SGDNTAVWWWEPTNSDVQVVK 117

Query: 340 QIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 390
                  P +       P+  L    ++   L   H    R WW  Q ++YLMR 
Sbjct: 118 ------LPIIDSLHSRPPFLPLAVPEDLAERLERLHGD-PRVWWIGQLLKYLMRP 165


Alpha 1,6-fucosyltransferase (Fut8) transfers a fucose moiety from GDP-fucose to the reducing terminal N-acetylglucosamine of the core structure of Asn-linked oligosaccharides, in a process termed core fucosylation. Core fucosylation is essential for the function of growth factor receptors. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 328

>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 590
KOG3705580 consensus Glycoprotein 6-alpha-L-fucosyltransferas 100.0
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 99.65
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 98.99
PF01531298 Glyco_transf_11: Glycosyl transferase family 11; I 98.32
PF03254476 XG_FTase: Xyloglucan fucosyltransferase; InterPro: 97.75
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 96.93
>KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=2.6e-81  Score=650.50  Aligned_cols=313  Identities=21%  Similarity=0.329  Sum_probs=271.5

Q ss_pred             CCCCCCCCcccCCcCCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeeccCCCcchhHHHHHHHHHHHHHHhcCcEEEE
Q 007769          201 ISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVT  280 (590)
Q Consensus       201 ~~~~~~p~wi~g~dee~~pLT~~vQr~I~~~QNP~DCs~A~~KfLvc~~~~~cGfGcg~H~v~~C~~L~lA~~tgRtLIl  280 (590)
                      ...+|+..|+   .+|...||++|||||.++|||+||++|  |+|||+++++|||||++||++||+|  +||+|.||||+
T Consensus       177 ~q~dG~e~wR---~Kea~dlt~lvqrri~~LQNPkdCs~A--kkLVCnlnKgCGyGCQLHHVvYCfi--~AyaTqRtliL  249 (580)
T KOG3705|consen  177 EQLDGSEEWR---FKEATDLTQLVQRRIEKLQNPKDCSEA--KKLVCNLNKGCGYGCQLHHVVYCFI--TAYATQRTLIL  249 (580)
T ss_pred             HhccCcHHHH---HhHHhHHHHHHHHHHHHhcChHhhHHH--hhheeeccCCcccccceeeeeEeee--eeeecceEEEE
Confidence            3568999999   489999999999999999999999999  9999999999999999999999999  99999999999


Q ss_pred             eCCCCcCCCCCCCCCCCCCccccccCCccccccchhc----cccchhhhccCcEEe--ccCCCCcccccCCCCCCCCCCC
Q 007769          281 NYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFE----LMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPW  354 (590)
Q Consensus       281 d~~~~~~h~Gc~g~~~~~WscyF~P~sS~~C~~~a~e----~~~~~~~~~~~Vv~~--~~~~~~~~~f~g~~P~p~~~P~  354 (590)
                      ++.+|.|+.|       ||+.+|.|. |+.|.++++.    |...... ..+||.+  .|++.++|+|+     |.++|+
T Consensus       250 ks~gWrY~~g-------GWe~VF~pv-S~~c~D~~~~nT~~wpg~~~~-n~qVv~LpIvDSL~prPpyL-----PlAVPE  315 (580)
T KOG3705|consen  250 KSDGWRYSSG-------GWESVFKPV-SKCCFDEAVGNTEAWPGAEPS-NAQVVSLPIVDSLIPRPPYL-----PLAVPE  315 (580)
T ss_pred             ecCCceecCC-------Chhhhhhhh-hhcccccccccccCCCCCCCC-CceEEEeecccccCCCCCCc-----cccCcH
Confidence            9999988765       799999885 8999998653    3322111 2456666  78899999999     999999


Q ss_pred             cccccccccccchhhhcccchhhHHHHHHHHHHhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCccccccCCCcc
Q 007769          355 SYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGS  434 (590)
Q Consensus       355 ~~~~~l~~lhG~p~~~~~~~~~~WW~gQ~~~YLmRp~~e~l~~Lln~~R~~afG~~aa~~v~~~l~~~w~~~~~~~~~~~  434 (590)
                      +++++++++||+|        .+||+||+++||||||+.+- +.|+++                              -+
T Consensus       316 dLa~rL~rlHgdP--------~vwwVgqFikYL~Rpqp~t~-~~l~~a------------------------------~k  356 (580)
T KOG3705|consen  316 DLAERLTRLHGDP--------PVWWVGQFIKYLMRPQPATQ-EKLDKA------------------------------LK  356 (580)
T ss_pred             HHHHHHHHhcCCC--------ceeeHHHHHHHHhCCChhhH-HHHHHH------------------------------HH
Confidence            9999999999999        99999999999999999443 333321                              12


Q ss_pred             chhhhhhcCCCCCCCCCeEEEEEcCCccc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCchHHHHHhc-cC
Q 007769          435 DIEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LY  507 (590)
Q Consensus       435 ~i~e~V~s~~kp~~p~PiVGVHVRrGDK~-~Ea~~~~~eeYM~~Ve~~~~-----~~p~~rrIFLATDDp~Vi~Eak-kY  507 (590)
                      .|+          +.+||||||||||||+ +||++|+++|||.+||.+++     ..|..||||||||||+|++|+| +|
T Consensus       357 ~lg----------~~~PivGvhvRRTDKVGTEAAfH~~eEYM~~vE~~f~~le~rg~~~~rRiflAsDDp~vv~EAk~kY  426 (580)
T KOG3705|consen  357 SLG----------LDKPIVGVHVRRTDKVGTEAAFHALEEYMEWVEIWFKVLEKRGKPLERRIFLASDDPTVVPEAKNKY  426 (580)
T ss_pred             hCC----------CCCceeeEEEEecccccchhhhhhHHHHHHHHHHHHHHHHHhCCchhheEEEecCCchhchHhhccC
Confidence            333          7889999999999998 69999999999999998875     3567899999999999999999 99


Q ss_pred             CCceEEeec-cccccCCchHHHHhhhhCCCcccchHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhcCC-Cccccceecc
Q 007769          508 PHWNFYFTN-VTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVN  585 (590)
Q Consensus       508 p~y~fy~t~-I~r~~g~~s~a~y~~~~g~~~sl~~iLvDl~LLseCDyfVGTfSSnv~RLi~ELRqt~g-ka~a~F~Svd  585 (590)
                      |+|.|+.++ |.+.       +....++++++++++++||++||.+||+||||||||||++||+|||.| |+.+.|+|+|
T Consensus       427 PnYe~igd~eia~~-------A~l~nRYTd~sL~GvIlDIh~LS~~d~LVCTFSSQVCRvaYEimQt~~pDa~~~FhSLD  499 (580)
T KOG3705|consen  427 PNYEVIGDTEIAKT-------AQLNNRYTDASLMGVILDIHILSKVDYLVCTFSSQVCRVAYEIMQTSGPDAGSKFHSLD  499 (580)
T ss_pred             CCcEEeccHHHHHH-------hhccccchhhhhhheeeeeeeecccceEEEechHHHHHHHHHHHhccCCCccccccccc
Confidence            999996443 3222       223445588899999999999999999999999999999999999998 9999999999


Q ss_pred             CCCCC
Q 007769          586 KDRFW  590 (590)
Q Consensus       586 ~~~~~  590 (590)
                      ||||+
T Consensus       500 DIYYf  504 (580)
T KOG3705|consen  500 DIYYF  504 (580)
T ss_pred             ceeee
Confidence            99984



>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants Back     alignment and domain information
>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query590
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 1e-47
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526 Back     alignment and structure
 Score =  173 bits (440), Expect = 1e-47
 Identities = 70/387 (18%), Positives = 126/387 (32%), Gaps = 81/387 (20%)

Query: 215 EENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINE 274
           +E   LT  VQR I   Q+P +C     + LV +  +  G+G   Q+  +     IA   
Sbjct: 120 KEAKDLTELVQRRITYLQNPKDC--SKAKKLVCNINKGCGYG--CQLHHVVYCFMIAYGT 175

Query: 275 KRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKD 334
           +R L+    N     G        W   F P  S+ C DR+     +             
Sbjct: 176 QRTLILESQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHW----------SG 217

Query: 335 NYSSKQIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 390
               K +     P V       P+  L    ++   L+  H      WW +Q V+YL+R 
Sbjct: 218 EVKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHG-DPAVWWVSQFVKYLIRP 276

Query: 391 LTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPR 450
              +    +  A                                                
Sbjct: 277 -QPWLEKEIEEATKKLG----------------------------------------FKH 295

Query: 451 PMLSMHVRMGDK-ACEMKVVEFEKYMLLAD-----RIRKHFPHLNSIWLSTEMQEVVDKS 504
           P++ +HVR  DK   E      E+YM+  +       R+       ++L+T+   ++ ++
Sbjct: 296 PVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEA 355

Query: 505 K-LYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTW 563
           K  YP++ F   N      +++ +    +   E S    +++    + +DF +    S  
Sbjct: 356 KTKYPNYEFISDN------SISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQV 409

Query: 564 CFLIDGMRNTGGKVMSGYLSVNKDRFW 590
           C +   +  T     S       D ++
Sbjct: 410 CRVAYEIMQTLHPDASANFHSLDDIYY 436


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query590
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 100.0
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 99.81
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.02
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.75
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=5.6e-61  Score=524.06  Aligned_cols=314  Identities=21%  Similarity=0.334  Sum_probs=252.8

Q ss_pred             CCCCCCCcccCCcCCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeeccCCCcchhHHHHHHHHHHHHHHhcCcEEEEe
Q 007769          202 SEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTN  281 (590)
Q Consensus       202 ~~~~~p~wi~g~dee~~pLT~~vQr~I~~~QNP~DCs~A~~KfLvc~~~~~cGfGcg~H~v~~C~~L~lA~~tgRtLIld  281 (590)
                      +.+++..|+   ..+++|||++||++||.||||+||++|  |||+|+++..|||||.+|++++|++  +|+++|||||+|
T Consensus       110 ~~~g~~~~r---~~~~~~lt~~vq~~i~~~QnP~~Cs~a--K~Lv~~~~~~~GfGs~lh~l~~~L~--~A~~~~Rtliid  182 (526)
T 2de0_X          110 QTDGAGDWR---EKEAKDLTELVQRRITYLQNPKDCSKA--KKLVCNINKGCGYGCQLHHVVYCFM--IAYGTQRTLILE  182 (526)
T ss_dssp             HTTTHHHHH---HHHHHHHHHHHHHHHHHHHCCSCGGGS--CEEEEECCCSSCHHHHHHHHHHHHH--HHHHHTCEEEEE
T ss_pred             hhhchhHHH---HHHHHHHHHHHHHHHHHhcCCCcCCCC--CEEEEEecCCCchHHHHHHHHHHHH--HHHhhCCEEEEE
Confidence            456677777   488999999999999999999999999  9999999889999999999999999  999999999999


Q ss_pred             CCCCcCCCCCCCCCCCCCccccccCCccccccch----hccccchhhhccCcEEe--ccCCCCcccccCCCCCCCCCCCc
Q 007769          282 YYNRADHDGCKGSSRSSWSCYFLPETSQECRDRA----FELMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPWS  355 (590)
Q Consensus       282 ~~~~~~h~Gc~g~~~~~WscyF~P~sS~~C~~~a----~e~~~~~~~~~~~Vv~~--~~~~~~~~~f~g~~P~p~~~P~~  355 (590)
                      +.+|.+++|       +|+|||.| .|++|..+.    ..|.......+..||..  .+++.+.++|.     |+++|.+
T Consensus       183 d~~w~Y~~g-------~w~~yF~P-~s~~C~~~~~~~~~~w~~~~~~~~~~vV~~~~i~~~~~~~~~~-----~~~~P~~  249 (526)
T 2de0_X          183 SQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPRPPYL-----PLAVPED  249 (526)
T ss_dssp             CTTCSSCTT-------CGGGTBCC-SCSSCCCCCCSCCCBCCCTTGGGGCSEEEECCGGGCSSCCSCC-----TTCEEGG
T ss_pred             CCCCCcCCC-------CHHHhhhC-cCccccCCCccccCCCCCcccCCCcceEEeecccccccccccc-----ccccchh
Confidence            999876533       59999999 589998862    22332211123456654  34455555665     6689999


Q ss_pred             ccccccccccchhhhcccchhhHHHHHHHHHHhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCccccccCCCccc
Q 007769          356 YLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD  435 (590)
Q Consensus       356 ~~~~l~~lhG~p~~~~~~~~~~WW~gQ~~~YLmRp~~e~l~~Lln~~R~~afG~~aa~~v~~~l~~~w~~~~~~~~~~~~  435 (590)
                      ..+.+..+||+|        ++||+||+++|||||++++ ++.+++.+.                              +
T Consensus       250 ~~~~L~~l~~dp--------~~w~~~q~~~yl~rP~~~i-~~~I~~~~~------------------------------~  290 (526)
T 2de0_X          250 LADRLVRVHGDP--------AVWWVSQFVKYLIRPQPWL-EKEIEEATK------------------------------K  290 (526)
T ss_dssp             GHHHHHHHCSCH--------HHHHHHHHHHHHTCBCHHH-HHHHHHHHH------------------------------H
T ss_pred             HHHHHHhccCCc--------HHHHHHHHHHHHcCCCHHH-HHHHHHHHH------------------------------H
Confidence            999999999999        9999999999999999965 455555331                              2


Q ss_pred             hhhhhhcCCCCCCCCCeEEEEEcCCccc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCchHHHHHhc-cCC
Q 007769          436 IEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LYP  508 (590)
Q Consensus       436 i~e~V~s~~kp~~p~PiVGVHVRrGDK~-~Ea~~~~~eeYM~~Ve~~~~-----~~p~~rrIFLATDDp~Vi~Eak-kYp  508 (590)
                      ++          ++.|+||||||||||+ .|+.++++++||++|++|++     ..+..++||||||||+|+++++ +||
T Consensus       291 l~----------~~~piVGVHIRrGDk~~~E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDDp~v~~e~k~~~p  360 (526)
T 2de0_X          291 LG----------FKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYP  360 (526)
T ss_dssp             HT----------CCSSEEEEEECCC-----CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESCHHHHHHHHHHCT
T ss_pred             hC----------CCCCEEEEEEeCCCCCccccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCCHHHHHHHHHhCC
Confidence            22          5889999999999995 69999999999999998876     3556789999999999999999 799


Q ss_pred             CceEEeeccccccCCchHHHHhhhhCCCcccchHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhcCC-CccccceeccCC
Q 007769          509 HWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVNKD  587 (590)
Q Consensus       509 ~y~fy~t~I~r~~g~~s~a~y~~~~g~~~sl~~iLvDl~LLseCDyfVGTfSSnv~RLi~ELRqt~g-ka~a~F~Svd~~  587 (590)
                      +|+|+.+. ...   .+ +. ...+.+.+++.++++|++||++|||||||+||||||++++||++.+ ++...|.|+|++
T Consensus       361 ~~~~~~d~-~~~---~~-a~-~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~~l~~~~~~~~~~~~~SLD~~  434 (526)
T 2de0_X          361 NYEFISDN-SIS---WS-AG-LHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDI  434 (526)
T ss_dssp             TSEEECCC-CSS---CS-SG-GGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHHHHHTTSSSCCTTCEEESSCC
T ss_pred             CCEEecCc-ccc---cc-cC-ccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHHHHhcCcCccccccccCCccc
Confidence            99986322 111   10 00 1222356678999999999999999999999999999999999987 788899999999


Q ss_pred             CCC
Q 007769          588 RFW  590 (590)
Q Consensus       588 ~~~  590 (590)
                      +.|
T Consensus       435 ~~~  437 (526)
T 2de0_X          435 YYF  437 (526)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            865



>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00