Citrus Sinensis ID: 007896
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 585 | ||||||
| 225436886 | 665 | PREDICTED: GPI transamidase component PI | 0.870 | 0.765 | 0.686 | 0.0 | |
| 225436888 | 664 | PREDICTED: GPI transamidase component PI | 0.870 | 0.766 | 0.686 | 0.0 | |
| 449525439 | 669 | PREDICTED: GPI transamidase component PI | 0.923 | 0.807 | 0.652 | 0.0 | |
| 255560115 | 672 | GPI-anchor transamidase, putative [Ricin | 0.909 | 0.791 | 0.655 | 0.0 | |
| 297829264 | 647 | GPI transamidase component Gpi16 subunit | 0.870 | 0.786 | 0.652 | 0.0 | |
| 356559118 | 670 | PREDICTED: GPI transamidase component PI | 0.864 | 0.755 | 0.645 | 0.0 | |
| 356506668 | 662 | PREDICTED: GPI transamidase component PI | 0.854 | 0.755 | 0.653 | 0.0 | |
| 6642651 | 639 | unknown protein [Arabidopsis thaliana] | 0.849 | 0.777 | 0.654 | 0.0 | |
| 18397852 | 644 | GPI transamidase component Gpi16 subunit | 0.849 | 0.771 | 0.654 | 0.0 | |
| 30680143 | 643 | GPI transamidase component Gpi16 subunit | 0.849 | 0.772 | 0.654 | 0.0 |
| >gi|225436886|ref|XP_002273696.1| PREDICTED: GPI transamidase component PIG-T-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/510 (68%), Positives = 426/510 (83%), Gaps = 1/510 (0%)
Query: 50 KPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQ 109
KP DRKVLAHFHF+S+AP + ++G HH LFPKA+ QLV+KFR++EMELSFTQGRW YE+
Sbjct: 37 KPLADRKVLAHFHFESKAPPTRTYGHHHRLFPKALYQLVQKFRIREMELSFTQGRWNYER 96
Query: 110 WGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSA 169
WGGFDP+SS+NAKPPGVELWAVFDVP LVD W+NLTHTLSGLFCASINFLESST YSA
Sbjct: 97 WGGFDPISSSNAKPPGVELWAVFDVPHDLVDASWKNLTHTLSGLFCASINFLESSTAYSA 156
Query: 170 PELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR 229
P+ F+P G+LRYG+LPREAVCTENLTPWLKLLPCRDKAGL+ALMDRPSIYRGFYHSQR
Sbjct: 157 PDWGFQPFSGSLRYGSLPREAVCTENLTPWLKLLPCRDKAGLAALMDRPSIYRGFYHSQR 216
Query: 230 LRLTSSESGSDEVDSGIGLDQTLTVVLQPS-SWRTGKTYSVETNIQPSWSISSIFGRNIP 288
LRL+S+E GS E++SGI LDQTLTVVLQP+ S R TYS ++ +QPSWS+SSIFGR +
Sbjct: 217 LRLSSTEFGSTELESGIALDQTLTVVLQPTTSQRASMTYSSDSVLQPSWSLSSIFGRKVS 276
Query: 289 GKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFE 348
G+CV+AKSSNVY+Q++ GLV ELKNL E+ A E +N F++S+ P++V +
Sbjct: 277 GRCVLAKSSNVYVQVERGLVSELKNLHAEDEGSGAGNVTFEKTWNNPGFELSIAPNRVIK 336
Query: 349 EVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERG 408
EV+ LH +++ V+Y + ++ YS+S+PFDLG TWK PVVWS QAPLHASRFLMGSGNERG
Sbjct: 337 EVNILHDETSIVLYEYLIDNYSNSEPFDLGFTWKFPVVWSSPQAPLHASRFLMGSGNERG 396
Query: 409 AIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADV 468
AIAISL+ TE S+GL + I+ C LR ++FQVVPWY++VYFHTLQVFVD +P+++ D
Sbjct: 397 AIAISLKATEPSDGLWVADTIENSCMLRFNVFQVVPWYVRVYFHTLQVFVDGKPQSVTDF 456
Query: 469 VDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSA 528
++++R+SPS+DKVSPGVMEM LKLPC KS +LEFDKGFLHIDEYPPDANQGFDIPSA
Sbjct: 457 IERMRISPSEDKVSPGVMEMALKLPCCVKSVTLTLEFDKGFLHIDEYPPDANQGFDIPSA 516
Query: 529 LISFPSFNARMNFSEDEFLNNSPILSKFQH 558
+ISFP F+A M+F +D+ LN SP+LSKFQ
Sbjct: 517 VISFPDFHASMHFLKDDSLNKSPLLSKFQE 546
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436888|ref|XP_002273727.1| PREDICTED: GPI transamidase component PIG-T-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449525439|ref|XP_004169725.1| PREDICTED: GPI transamidase component PIG-T-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255560115|ref|XP_002521075.1| GPI-anchor transamidase, putative [Ricinus communis] gi|223539644|gb|EEF41226.1| GPI-anchor transamidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297829264|ref|XP_002882514.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] gi|297328354|gb|EFH58773.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356559118|ref|XP_003547848.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356506668|ref|XP_003522098.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|6642651|gb|AAF20232.1|AC012395_19 unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|18397852|ref|NP_566299.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|15292901|gb|AAK92821.1| unknown protein [Arabidopsis thaliana] gi|22136838|gb|AAM91763.1| unknown protein [Arabidopsis thaliana] gi|332640982|gb|AEE74503.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|30680143|ref|NP_850530.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|332640983|gb|AEE74504.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 585 | ||||||
| TAIR|locus:2098485 | 644 | AT3G07140 "AT3G07140" [Arabido | 0.487 | 0.442 | 0.674 | 2.8e-105 | |
| MGI|MGI:1926178 | 582 | Pigt "phosphatidylinositol gly | 0.425 | 0.427 | 0.386 | 7.8e-62 | |
| ZFIN|ZDB-GENE-090313-46 | 634 | pigt "phosphatidylinositol gly | 0.382 | 0.353 | 0.422 | 5.4e-59 | |
| RGD|1307156 | 580 | Pigt "phosphatidylinositol gly | 0.425 | 0.429 | 0.386 | 1.4e-58 | |
| UNIPROTKB|Q969N2 | 578 | PIGT "GPI transamidase compone | 0.406 | 0.411 | 0.393 | 4.8e-58 | |
| UNIPROTKB|E2RDR1 | 579 | PIGT "Uncharacterized protein" | 0.406 | 0.411 | 0.389 | 9.9e-58 | |
| UNIPROTKB|F1P2G6 | 574 | PIGT "Uncharacterized protein" | 0.408 | 0.416 | 0.387 | 1.6e-57 | |
| UNIPROTKB|F1N4W0 | 578 | PIGT "Uncharacterized protein" | 0.406 | 0.411 | 0.393 | 6.9e-57 | |
| UNIPROTKB|F1SD35 | 578 | LOC100626091 "Uncharacterized | 0.406 | 0.411 | 0.385 | 2.9e-56 | |
| ASPGD|ASPL0000041881 | 582 | AN1775 [Emericella nidulans (t | 0.347 | 0.348 | 0.372 | 3.2e-50 |
| TAIR|locus:2098485 AT3G07140 "AT3G07140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 203/301 (67%), Positives = 237/301 (78%)
Query: 50 KPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQ 109
KP PDRKVLAHFHF++RAP S+SHGRHHHLFPKAI+QLV+KFRVKEMELSFTQGRW +E
Sbjct: 38 KPLPDRKVLAHFHFENRAPPSNSHGRHHHLFPKAISQLVQKFRVKEMELSFTQGRWNHEH 97
Query: 110 WGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSA 169
WGGFDPLSS NAKP GVELWAVFDVPQS VD W+NLTH LSGLFCASINFLESST+Y+A
Sbjct: 98 WGGFDPLSSMNAKPVGVELWAVFDVPQSQVDTSWKNLTHALSGLFCASINFLESSTSYAA 157
Query: 170 PELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR 229
P F P+ LRYG+LPREAVCTENLTPWLKLLPCRDK G+SALM+RPS+YRGFYHSQR
Sbjct: 158 PTWGFGPNSDKLRYGSLPREAVCTENLTPWLKLLPCRDKDGISALMNRPSVYRGFYHSQR 217
Query: 230 LRLTXXXXXXXXXXXXIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPG 289
L L+ I L+QTLTVVLQP +T SVE+N+QPSWS+SS+FGR + G
Sbjct: 218 LHLSTVESGQEGLGSGIVLEQTLTVVLQP------ETTSVESNMQPSWSLSSLFGRQVVG 271
Query: 290 KCVIAKSSNVYLQLDNGLVG-ELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFE 348
+CV+AKSSNVYLQL+ GL+G E KN++ E E+ N F++S+ P++V
Sbjct: 272 RCVLAKSSNVYLQLE-GLLGYESKNVDTE--------IEAHQLWKNAEFELSLKPERVIR 322
Query: 349 E 349
E
Sbjct: 323 E 323
|
|
| MGI|MGI:1926178 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-090313-46 pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| RGD|1307156 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q969N2 PIGT "GPI transamidase component PIG-T" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RDR1 PIGT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P2G6 PIGT "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1N4W0 PIGT "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SD35 LOC100626091 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000041881 AN1775 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh2_kg.3__735__AT3G07140.1 | annotation not avaliable (647 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
| scaffold_100904.1 | • | • | • | 0.749 | |||||||
| Al_scaffold_0001_1667 | • | 0.472 | |||||||||
| fgenesh2_kg.3__3567__AT2G20390.1 | • | 0.464 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 585 | |||
| pfam04113 | 559 | pfam04113, Gpi16, Gpi16 subunit, GPI transamidase | 1e-158 |
| >gnl|CDD|217904 pfam04113, Gpi16, Gpi16 subunit, GPI transamidase component | Back alignment and domain information |
|---|
Score = 464 bits (1196), Expect = e-158
Identities = 185/539 (34%), Positives = 267/539 (49%), Gaps = 85/539 (15%)
Query: 16 VLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQS-RAPHSSSHG 74
+LL LFL A SSSG E++ E L L+P PD K+LA F+F+S P SS
Sbjct: 1 LLLFAYLFLVALASSSGLS------EDYHESLTLRPLPDSKLLASFNFRSENEPSSSFEE 54
Query: 75 RHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDV 134
RH LFP+++ Q+++ +E+ L FTQGRW E WG P + + GVE+WA +
Sbjct: 55 RHFRLFPRSLGQILQHANTRELHLRFTQGRWDAESWG-SRPWNGARSGGTGVEVWAWIEA 113
Query: 135 PQS-LVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGN------LRYGTLP 187
Q D W+ LT+ LSGLFCAS+NF++S+ T P +F+P+ L YG+LP
Sbjct: 114 DQDEEADEKWKTLTNALSGLFCASLNFIDSTRTTR-PVFSFQPNGDGSNSNLHLLYGSLP 172
Query: 188 REAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIG 247
E VCTENLTP+LKLLPC+ KAG+S+L+D ++ + S + + + +
Sbjct: 173 GEVVCTENLTPFLKLLPCKGKAGISSLLDGHKLFDSSWQSMAIDVRPVCDDDQG-ECKLQ 231
Query: 248 LDQTLTVVL--------------QPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVI 293
++QT+ VVL Q + + + SWS+S +FGR + G C +
Sbjct: 232 MEQTVDVVLDVERSKRPRLKPDTQKPCHSDDTCFPLGDTSEVSWSLSELFGRPLKGSCPL 291
Query: 294 AKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNL 353
A SS V LQ+ SV EV
Sbjct: 292 ADSSKVCLQVP--------------------------------ESRSVNVSPGAREVKGT 319
Query: 354 HGKSTSVIYGFSVEKYSDSQPFDLGLTWK-IPVVWSCQQAPLHASRFLMGSGNERGAIAI 412
G + F ++ +S PFDL L W V + Q L A R L G G ERG + I
Sbjct: 320 DGFIRT----FDLD---NSTPFDLKLPWPESTTVVTSDQPVLKAERSLTGHGQERGGLRI 372
Query: 413 SLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKI 472
SS T I F+++PW+++VY HTLQ+ +D Q + D+++KI
Sbjct: 373 IFTNPSSS----TVEFI---------YFEILPWFVRVYLHTLQIKIDGQQKPTKDLIEKI 419
Query: 473 RVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALIS 531
PS D+ P +E+ + LP S + + +F+K L EYPPDAN+GFDIP+A+I+
Sbjct: 420 YYRPSVDRERPTQLELKMSLPPAS-TVTLTYDFEKSILRYTEYPPDANRGFDIPAAVIT 477
|
GPI (glycosyl phosphatidyl inositol) transamidase is a multi-protein complex. Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase that adds glycosylphosphatidylinositols (GPIs) to newly synthesised proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif. Length = 559 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 585 | |||
| PF04113 | 564 | Gpi16: Gpi16 subunit, GPI transamidase component; | 100.0 | |
| KOG2407 | 575 | consensus GPI transamidase complex, GPI16/PIG-T co | 100.0 |
| >PF04113 Gpi16: Gpi16 subunit, GPI transamidase component; InterPro: IPR007245 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-136 Score=1134.29 Aligned_cols=458 Identities=43% Similarity=0.793 Sum_probs=406.6
Q ss_pred CCCCceeeeEEeeeCCCCcEEEEEEEEee-cCCCCCCCcccccccHHHHHHhHhcCeeEEEEEeeeeeccccccCCCCCC
Q 007896 38 GGGEEFSEELLLKPFPDRKVLAHFHFQSR-APHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPL 116 (585)
Q Consensus 38 ~~~e~f~E~L~lkPLp~~~lla~F~F~~~-~~~~~~~~~h~~lFPr~l~qil~~~~v~ELhLsfTqGrW~~~~WG~p~p~ 116 (585)
..+|.|+|+|+|||||+|+++++|+|++. ...+.+..+||++|||+|+||+++++++||||+|||||||+++||+ +|.
T Consensus 17 ~~~~~f~E~L~l~PL~~~~ll~~F~F~~~~~~~~~~~~~h~~~fP~~i~~il~~~~~~elhl~fTqG~W~~~~WG~-~p~ 95 (564)
T PF04113_consen 17 SASESFTEELTLKPLPDGKLLASFNFTTESSSSNNDEYQHYTLFPRSIGQILQKYNVRELHLSFTQGRWDYESWGY-PPF 95 (564)
T ss_pred cccCceeeEEEEEECCCCCEEEEEEEEeccCccccccccccccCCHHHHHHHHhcCceEEEEEEeeccCcccccCC-CCc
Confidence 45689999999999999999999999994 3335578999999999999999999999999999999999999998 779
Q ss_pred CCCCCCCCceEEEEEEeCCc-hhHHHHHHHHHHHhhhhhhcccccccCCceeecCcccccCCC-----CeeeEecCCCcc
Q 007896 117 SSNNAKPPGVELWAVFDVPQ-SLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSF-----GNLRYGTLPREA 190 (585)
Q Consensus 117 ~~~~~~~~GaELwA~f~~~~-~~vd~~W~~LtnaLSGLFCASLnfids~~t~~~P~~sf~p~~-----~~l~~a~LP~E~ 190 (585)
+|.+++|+||||||||+++. +++|++|++|||+|||||||||||||+++|++ |.++|+|.+ .+++||+||+|+
T Consensus 96 ~g~~~~~~G~elwA~~~~~~~~~~d~~W~~Lt~~LsGlfCASLn~id~~~t~~-P~~~~~~~~~~~~~~~~~~~~LP~E~ 174 (564)
T PF04113_consen 96 DGFKSGPTGAELWAWFEAPSDEEADERWKGLTNALSGLFCASLNFIDSTNTTS-PVFSFQPEGNGNNSLFLRYASLPREP 174 (564)
T ss_pred cccccCCcceEEEEEecCCcchHHHHHHHHHHHHHHHHhhhcccccCCCcEEC-cceeeccCCCCCCcceEEeeeCCCCC
Confidence 99999999999999999875 45999999999999999999999999999886 999999987 489999999999
Q ss_pred cccCChhhhhhhcCCCCCCccccccCCCcccccccceeeEEEEeecCCCCCCceeEEEEEEEEEEEcCCCccCCc-----
Q 007896 191 VCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGK----- 265 (585)
Q Consensus 191 VCTENLTPwlKLLPCk~kaGLssLL~~~~lf~s~yhS~~i~v~~~c~~~~~~~~~~~L~qtl~~V~d~~~~~~~~----- 265 (585)
|||||||||+||||||+|+|||+|||||++||+.||||+|||++.|++..|. |+++|+|++++|+|+.++++++
T Consensus 175 vCTENLTP~~KLLPc~~~~GLasLL~~~~lf~s~yhS~~i~v~~~c~~~~~~-~~~~l~~~~~~V~d~~~~~~~~p~~~~ 253 (564)
T PF04113_consen 175 VCTENLTPWLKLLPCKGKAGLASLLDPHKLFDSNYHSLSIDVRTICDDSTCS-CSLELEQTLTVVLDPPRSLRRRPVPGD 253 (564)
T ss_pred cccccchhhHHhCCCCccCCHHHHcCchhhhcCCceeEEEEEEecCCCCCCc-eEEEEEeEEEEEECchhhcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999998888 9999999999999999775544
Q ss_pred --------cc------cCCCCCCCCeeeecccCCCCCCCCcCcc-CceEEEEcCCCcccccchhhhcccccccccccccc
Q 007896 266 --------TY------SVETNIQPSWSISSIFGRNIPGKCVIAK-SSNVYLQLDNGLVGELKNLERENAKYVANTFESEG 330 (585)
Q Consensus 266 --------~~------~~~~~~~~~WSL~~lFgr~l~g~CplA~-sS~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (585)
+| ..++..+.+|||++||||+|+|+||+|+ +|+|||+++...
T Consensus 254 ~l~cd~~k~~~~~~c~pl~~~~~~dWSl~~lFGr~i~g~CplA~~sS~V~v~v~~~~----------------------- 310 (564)
T PF04113_consen 254 ELRCDTSKPYDAWQCFPLGDSSEQDWSLSSLFGRKIPGSCPLADESSKVYVDVPEEW----------------------- 310 (564)
T ss_pred ccccccCCCcccceeeecCCCCCCCeeHHHHhCCCCCCCCccCCCCceEEEecCCce-----------------------
Confidence 11 1244567899999999999999999999 999999986532
Q ss_pred cccCcceeEeeCCCcceeeeecccCCCcceEEEEEecCCCCCCccceeeeccc-ccccccCCCceEEEEEeecccccccc
Q 007896 331 FQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKI-PVVWSCQQAPLHASRFLMGSGNERGA 409 (585)
Q Consensus 331 ~~~~~~f~ls~~p~~~~~~~~~~~~~~~~~~~~ydl~~~s~~~~~dl~~~~~~-p~~~~~~~ppl~a~R~ltG~Gq~rGg 409 (585)
++.+.+.... . ........+|++.+. .++||.+.|+. +..+..++|||+|+|+++||||+|||
T Consensus 311 -------~v~~~~~~~~--~----~~~~~~~~~y~l~~~---~~~dl~l~~~~~~~~~~~~~ppL~a~R~LtG~GQerGg 374 (564)
T PF04113_consen 311 -------SVSPEPGADE--Q----KTSSDNLNCYDLSES---SPFDLYLPWKNSSIVWSLPPPPLYASRSLTGYGQERGG 374 (564)
T ss_pred -------EEeccCCceE--E----eccCCcEEEEEcCCC---CCCCeEeeccCCCccccCCCCceEEEEEEcCCCcCCCe
Confidence 2222222111 1 123446789999865 48999999975 33445689999999999999999999
Q ss_pred EEEEEecCCCCCCCCCccccCCCceeEEEEEeeecceeEEeeeEEEEEEcCcccccccceeEEEeeCCCCCCCCceEEEE
Q 007896 410 IAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMI 489 (585)
Q Consensus 410 l~~~i~N~~~~~~~~~~~~~~~~~~v~v~y~E~lPWy~r~YlHTL~v~~~g~~~~~~~~i~~~~y~Pa~dR~rP~~LEl~ 489 (585)
|++.|+|++ +.+++|+|||+||||||+|+|||++++++......+++++++|+||+||+||++||+.
T Consensus 375 l~~~i~N~~-------------~~~v~i~y~E~lPWf~r~YlhTL~v~~~~~~~~~~~~i~~~~y~Pa~dr~rp~~lE~~ 441 (564)
T PF04113_consen 375 LRTVITNPS-------------DTPVEIVYFESLPWFMRPYLHTLKVEVDGQPKPESDVIKSIYYSPAKDRKRPTHLELV 441 (564)
T ss_pred EEEEEECCC-------------CCceEEEEEEeccceeeeeEEEEEEEEecCccccccceeeEeeccccccCCCceEEEE
Confidence 999999997 4689999999999999999999999999777767789999999999999999999999
Q ss_pred EEecCCCeEEEEEEeccccccccccCCCCCCCCCccCCceeeecCcccccccccCcccCCCchhhhccccccceecccch
Q 007896 490 LKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHS 569 (585)
Q Consensus 490 l~lPa~~St~~ls~~FdK~fL~~~EYPPDANrGFdIp~AvIt~~~~~~~~~~~~~~~~~~spl~~~~~~~~~~~~~yt~~ 569 (585)
++|||+ |+++|+|||||+||||+|||||||||||||||||++++.+ +..++ ++|||+
T Consensus 442 l~lP~~-st~~~s~~f~K~~L~~~EyPpDAnrGfdi~~avi~~~~~~---------------------~~~~~-~~~T~~ 498 (564)
T PF04113_consen 442 LTLPPN-STVTLSIDFDKAFLRYTEYPPDANRGFDIPSAVITVLDPN---------------------SSSPY-RIYTES 498 (564)
T ss_pred EEECCC-ceEEEEEEEEeeeechhhCCCCcccCcccCceEEEeecCC---------------------CCccE-EEeccc
Confidence 999998 9999999999999999999999999999999999997743 22245 899999
Q ss_pred hhhh
Q 007896 570 ICIV 573 (585)
Q Consensus 570 l~~~ 573 (585)
||+.
T Consensus 499 lLv~ 502 (564)
T PF04113_consen 499 LLVS 502 (564)
T ss_pred cccc
Confidence 9875
|
Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase adds glycosylphosphatidylinositols (GPIs) to newly synthesized proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif [].; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex |
| >KOG2407 consensus GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 585 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 3e-08
Identities = 94/614 (15%), Positives = 163/614 (26%), Gaps = 194/614 (31%)
Query: 73 HGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVF 132
H HHH+ F E + + D LS + V+ +
Sbjct: 1 HHHHHHM----------DFETGEHQYQYK------------DILSVF--EDAFVDNFDCK 36
Query: 133 DVPQSLVDVYWR-------------NLTHTLSGLFCASINFLESSTTYSAPELTFKPSFG 179
DV + + + T L + + E + ++
Sbjct: 37 DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK----QEEMVQKFVEEVLRINYK 92
Query: 180 NLRYGTLPREAVCTENLTPWL---KLLPCRDKAGLSALMDRPSIYRGFYHSQR------L 230
L + TE P + + RD+ L + ++ Y+ R L
Sbjct: 93 FLM------SPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQVFAK-YNVSRLQPYLKL 140
Query: 231 R--LTSSESGSDEV---DSGIGLDQTLTV-VLQPSS----------WRT-GKTYSVETNI 273
R L + + G G + + V W S ET +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSG-KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 274 QPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKY---------VAN 324
+ + N + SSN+ L++ + + EL+ L + Y V N
Sbjct: 200 EMLQKLLYQIDPNWTSRS--DHSSNIKLRIHS-IQAELRRLLKSK-PYENCLLVLLNVQN 255
Query: 325 TFESEGFQSNHAFKISV-TPDK-VFEEVDNLHGKSTSVI---YGFSVE-------KYSDS 372
F N + KI + T K V + + S+ + + KY D
Sbjct: 256 AKAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 373 QPFDLGLTWKIPVVWSCQQAPLHASRF--LMGSGNERGAIAISLEPTESSEGLPTSHIID 430
+P DL P P S + G + + + II
Sbjct: 314 RPQDL------PRE-VLTTNPRRLSIIAESIRDGLAT------WDNWKHVNCDKLTTII- 359
Query: 431 GRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSK------DKVSPG 484
E +++ + P + F L VF I P+ V
Sbjct: 360 ---ESSLNVLE--PAEYRKMFDRLSVFPP-------SA--HI---PTILLSLIWFDVIKS 402
Query: 485 VMEMILKLPCGSKSAAF-----------SLEFD-------KGFLH---IDEY-PPDANQG 522
+ +++ S S+ + + LH +D Y P
Sbjct: 403 DVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 523 FDIPSALIS--FPSF------NARMNFSEDEF----LNNSPILSKFQHA----------- 559
D+ + F S N F L+ + K +H
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 560 --LQRHHHYMHSIC 571
LQ+ Y IC
Sbjct: 522 NTLQQLKFYKPYIC 535
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00