Citrus Sinensis ID: 007896


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
ccEEEcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHccEEEEEEEEEEEccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHccccccccccccccccEEcccccccccccccEEEccccccccccccccHHHHccccccccccccccccccccccccEEEEEEEEEcccccccccEEEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccEEEEccccccEEEEEcccccccEEEEcEEcccccccccccccccccccccccccccccEEEEEEEccccccEEEEEEEccccccccccccccccccccEEEEEEEEEccEEEEEEEEEEEEEcccccccccccEEEEEccccccccccEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccEEEcccccccccccccccccccccHHHccccccccccEEccHHHHHHHHHHHccccc
ccEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEEEEcccccccccccccccHHHHHHHHHHccccEEEEEEccccccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHEEEHccccccccccccEEEEccccccEEEEcccccccccccccHHHHHcccccccHHHHHcccccEEcccEcEEEEEEEEcccccccccEEEEEEEEEEEEEcccHccccccccccccccccccHHHHcccccccccccccccEEEEEcccccccccccccccHHHHcccccccccccccccEEEccccccEEEEEcccccccccccccccHHHccccccccEEEEcccccccccccccEEEEEEEEcccccccEEEEEEEcccccccccccccccccccEEEEEEEEccEEEEEEEEEEEEEEcccccccccccEEEEEccccccccccEEEEEEEEccccEEEEEEEEEcHHHEEEcccccccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc
MAILLSRRSNLLAVVVLLLCQLFLYATvsssgsvlkqgggeefseelllkpfpdrkvlahfhfqsraphssshgrhhhlFPKAIAQLVKKFRVKEMELSFTQGRWRYeqwggfdplssnnakppgvelwavfdvpqSLVDVYWRNLTHTLSGLFCASinflessttysapeltfkpsfgnlrygtlpreavctenltpwlkllpcrdkaglsalmdrpsiyrgfyhsqrlrltssesgsdevdsgigldqTLTVVlqpsswrtgktysvetniqpswsissifgrnipgkcviakssnvylqldnglvgELKNLERENAKYVANTfesegfqsnhafkisvtpdkvfeevdnlhgksTSVIYGFSvekysdsqpfdlgltwkipvvwscqqaplhasrflmgsgnergaiaisleptesseglptshiidgrcelrvdifqVVPWYIKVYFHTLQVFVDKQPRAMADVVDkirvspskdkvspgVMEMILklpcgsksaafslefdkgflhideyppdanqgfdipsalisfpsfnarmnfsedeflnnspilSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
maillsrrSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLqpsswrtgktysvetniqpswsissifgRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTfesegfqsnhAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISleptesseglptSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMAdvvdkirvspskdkvspgVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
MAIllsrrsnllavvvlllcqlflYATVSSSGSVLKQgggeefseelllKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTssesgsdevdsgIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
***LLSRRSNLLAVVVLLLCQLFLYATVSSSG*V***********ELLLKPFPDRKVLAHFHF************HHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR****************IGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLM*************************HIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIR**********GVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCA****
*******RSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPL****AKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSW************QPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKI****SCQQAPLHASRFLMGSGNERGAIAISLEP**********HIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNA**N*****FLNNSPILSKFQHALQ**HHYMHSICIVFWIIAQCAS***
MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQS***********HHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRL***********SGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEP********TSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
*AILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRT*KTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSED*FLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHSICIVFWIIAQCASEAC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query585 2.2.26 [Sep-21-2011]
Q8BXQ2582 GPI transamidase componen yes no 0.748 0.752 0.316 6e-63
Q969N2578 GPI transamidase componen yes no 0.752 0.761 0.314 4e-62
P38875610 GPI transamidase componen yes no 0.803 0.770 0.266 5e-43
O94380545 GPI transamidase componen yes no 0.760 0.816 0.276 5e-40
>sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus musculus GN=Pigt PE=1 SV=2 Back     alignment and function desciption
 Score =  242 bits (618), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/506 (31%), Positives = 246/506 (48%), Gaps = 68/506 (13%)

Query: 37  QGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFRVK 94
           +G  +   EEL++ P P   V A F F++R  +        H+ LFPKA+ QL+ K+ ++
Sbjct: 28  EGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLR 87

Query: 95  EMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLF 154
           E+ LSFTQG WR   WG   P       P G ELW  F    + VD  WR L++ LSG+F
Sbjct: 88  ELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWRELSNVLSGIF 142

Query: 155 CASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPCRD 207
           CAS+NF++++ T + P  +FKP    N      LRY  LPRE VCTENLTPW KLLPC  
Sbjct: 143 CASLNFIDATNTVT-PTASFKPLGLANDTDDYFLRYAVLPREVVCTENLTPWKKLLPCSS 201

Query: 208 KAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTY 267
           KAGLS L+    ++   YHSQ + +      +        L QTL+VV    ++ TG+  
Sbjct: 202 KAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFD--AFITGQG- 258

Query: 268 SVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFE 327
                 +  WS+  +F R +   C +A  S VY+ +                        
Sbjct: 259 ------KKDWSLFRMFSRTLTEACPLASQSLVYVDI------------------------ 288

Query: 328 SEGF-QSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVV 386
             G+ Q N   ++S  P   +++V     K+ +V   F     ++S+  ++ L WK P  
Sbjct: 289 -TGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPD 347

Query: 387 WSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPW 445
                 P LHA R++ G G ++G ++  L  +      P            V +  VVPW
Sbjct: 348 NEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFP------------VLLLDVVPW 395

Query: 446 YIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEF 505
           Y+++Y HTL +      +   +    I   P++D+  P ++EM+++LP  S +   S++F
Sbjct: 396 YLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRQQPHLLEMLIQLPANSVTKV-SIQF 450

Query: 506 DKGFLHIDEYPPDANQGFDIPSALIS 531
           ++  L   EY PD N GF +  +++S
Sbjct: 451 ERALLKWTEYTPDPNHGFYVSPSVLS 476




Component of the GPI transamidase complex. Essential for transfer of GPI to proteins, particularly for formation of carbonyl intermediates.
Mus musculus (taxid: 10090)
>sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo sapiens GN=PIGT PE=1 SV=1 Back     alignment and function description
>sp|P38875|GPI16_YEAST GPI transamidase component GPI16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI16 PE=1 SV=2 Back     alignment and function description
>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi16 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
225436886665 PREDICTED: GPI transamidase component PI 0.870 0.765 0.686 0.0
225436888664 PREDICTED: GPI transamidase component PI 0.870 0.766 0.686 0.0
449525439669 PREDICTED: GPI transamidase component PI 0.923 0.807 0.652 0.0
255560115672 GPI-anchor transamidase, putative [Ricin 0.909 0.791 0.655 0.0
297829264647 GPI transamidase component Gpi16 subunit 0.870 0.786 0.652 0.0
356559118670 PREDICTED: GPI transamidase component PI 0.864 0.755 0.645 0.0
356506668662 PREDICTED: GPI transamidase component PI 0.854 0.755 0.653 0.0
6642651639 unknown protein [Arabidopsis thaliana] 0.849 0.777 0.654 0.0
18397852644 GPI transamidase component Gpi16 subunit 0.849 0.771 0.654 0.0
30680143643 GPI transamidase component Gpi16 subunit 0.849 0.772 0.654 0.0
>gi|225436886|ref|XP_002273696.1| PREDICTED: GPI transamidase component PIG-T-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/510 (68%), Positives = 426/510 (83%), Gaps = 1/510 (0%)

Query: 50  KPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQ 109
           KP  DRKVLAHFHF+S+AP + ++G HH LFPKA+ QLV+KFR++EMELSFTQGRW YE+
Sbjct: 37  KPLADRKVLAHFHFESKAPPTRTYGHHHRLFPKALYQLVQKFRIREMELSFTQGRWNYER 96

Query: 110 WGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSA 169
           WGGFDP+SS+NAKPPGVELWAVFDVP  LVD  W+NLTHTLSGLFCASINFLESST YSA
Sbjct: 97  WGGFDPISSSNAKPPGVELWAVFDVPHDLVDASWKNLTHTLSGLFCASINFLESSTAYSA 156

Query: 170 PELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR 229
           P+  F+P  G+LRYG+LPREAVCTENLTPWLKLLPCRDKAGL+ALMDRPSIYRGFYHSQR
Sbjct: 157 PDWGFQPFSGSLRYGSLPREAVCTENLTPWLKLLPCRDKAGLAALMDRPSIYRGFYHSQR 216

Query: 230 LRLTSSESGSDEVDSGIGLDQTLTVVLQPS-SWRTGKTYSVETNIQPSWSISSIFGRNIP 288
           LRL+S+E GS E++SGI LDQTLTVVLQP+ S R   TYS ++ +QPSWS+SSIFGR + 
Sbjct: 217 LRLSSTEFGSTELESGIALDQTLTVVLQPTTSQRASMTYSSDSVLQPSWSLSSIFGRKVS 276

Query: 289 GKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFE 348
           G+CV+AKSSNVY+Q++ GLV ELKNL  E+    A     E   +N  F++S+ P++V +
Sbjct: 277 GRCVLAKSSNVYVQVERGLVSELKNLHAEDEGSGAGNVTFEKTWNNPGFELSIAPNRVIK 336

Query: 349 EVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERG 408
           EV+ LH +++ V+Y + ++ YS+S+PFDLG TWK PVVWS  QAPLHASRFLMGSGNERG
Sbjct: 337 EVNILHDETSIVLYEYLIDNYSNSEPFDLGFTWKFPVVWSSPQAPLHASRFLMGSGNERG 396

Query: 409 AIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADV 468
           AIAISL+ TE S+GL  +  I+  C LR ++FQVVPWY++VYFHTLQVFVD +P+++ D 
Sbjct: 397 AIAISLKATEPSDGLWVADTIENSCMLRFNVFQVVPWYVRVYFHTLQVFVDGKPQSVTDF 456

Query: 469 VDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSA 528
           ++++R+SPS+DKVSPGVMEM LKLPC  KS   +LEFDKGFLHIDEYPPDANQGFDIPSA
Sbjct: 457 IERMRISPSEDKVSPGVMEMALKLPCCVKSVTLTLEFDKGFLHIDEYPPDANQGFDIPSA 516

Query: 529 LISFPSFNARMNFSEDEFLNNSPILSKFQH 558
           +ISFP F+A M+F +D+ LN SP+LSKFQ 
Sbjct: 517 VISFPDFHASMHFLKDDSLNKSPLLSKFQE 546




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436888|ref|XP_002273727.1| PREDICTED: GPI transamidase component PIG-T-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449525439|ref|XP_004169725.1| PREDICTED: GPI transamidase component PIG-T-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255560115|ref|XP_002521075.1| GPI-anchor transamidase, putative [Ricinus communis] gi|223539644|gb|EEF41226.1| GPI-anchor transamidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297829264|ref|XP_002882514.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] gi|297328354|gb|EFH58773.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356559118|ref|XP_003547848.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] Back     alignment and taxonomy information
>gi|356506668|ref|XP_003522098.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] Back     alignment and taxonomy information
>gi|6642651|gb|AAF20232.1|AC012395_19 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18397852|ref|NP_566299.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|15292901|gb|AAK92821.1| unknown protein [Arabidopsis thaliana] gi|22136838|gb|AAM91763.1| unknown protein [Arabidopsis thaliana] gi|332640982|gb|AEE74503.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30680143|ref|NP_850530.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|332640983|gb|AEE74504.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
TAIR|locus:2098485644 AT3G07140 "AT3G07140" [Arabido 0.487 0.442 0.674 2.8e-105
MGI|MGI:1926178582 Pigt "phosphatidylinositol gly 0.425 0.427 0.386 7.8e-62
ZFIN|ZDB-GENE-090313-46634 pigt "phosphatidylinositol gly 0.382 0.353 0.422 5.4e-59
RGD|1307156580 Pigt "phosphatidylinositol gly 0.425 0.429 0.386 1.4e-58
UNIPROTKB|Q969N2578 PIGT "GPI transamidase compone 0.406 0.411 0.393 4.8e-58
UNIPROTKB|E2RDR1579 PIGT "Uncharacterized protein" 0.406 0.411 0.389 9.9e-58
UNIPROTKB|F1P2G6574 PIGT "Uncharacterized protein" 0.408 0.416 0.387 1.6e-57
UNIPROTKB|F1N4W0578 PIGT "Uncharacterized protein" 0.406 0.411 0.393 6.9e-57
UNIPROTKB|F1SD35578 LOC100626091 "Uncharacterized 0.406 0.411 0.385 2.9e-56
ASPGD|ASPL0000041881582 AN1775 [Emericella nidulans (t 0.347 0.348 0.372 3.2e-50
TAIR|locus:2098485 AT3G07140 "AT3G07140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 203/301 (67%), Positives = 237/301 (78%)

Query:    50 KPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQ 109
             KP PDRKVLAHFHF++RAP S+SHGRHHHLFPKAI+QLV+KFRVKEMELSFTQGRW +E 
Sbjct:    38 KPLPDRKVLAHFHFENRAPPSNSHGRHHHLFPKAISQLVQKFRVKEMELSFTQGRWNHEH 97

Query:   110 WGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSA 169
             WGGFDPLSS NAKP GVELWAVFDVPQS VD  W+NLTH LSGLFCASINFLESST+Y+A
Sbjct:    98 WGGFDPLSSMNAKPVGVELWAVFDVPQSQVDTSWKNLTHALSGLFCASINFLESSTSYAA 157

Query:   170 PELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR 229
             P   F P+   LRYG+LPREAVCTENLTPWLKLLPCRDK G+SALM+RPS+YRGFYHSQR
Sbjct:   158 PTWGFGPNSDKLRYGSLPREAVCTENLTPWLKLLPCRDKDGISALMNRPSVYRGFYHSQR 217

Query:   230 LRLTXXXXXXXXXXXXIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPG 289
             L L+            I L+QTLTVVLQP      +T SVE+N+QPSWS+SS+FGR + G
Sbjct:   218 LHLSTVESGQEGLGSGIVLEQTLTVVLQP------ETTSVESNMQPSWSLSSLFGRQVVG 271

Query:   290 KCVIAKSSNVYLQLDNGLVG-ELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFE 348
             +CV+AKSSNVYLQL+ GL+G E KN++ E         E+     N  F++S+ P++V  
Sbjct:   272 RCVLAKSSNVYLQLE-GLLGYESKNVDTE--------IEAHQLWKNAEFELSLKPERVIR 322

Query:   349 E 349
             E
Sbjct:   323 E 323


GO:0003923 "GPI-anchor transamidase activity" evidence=ISS
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0042765 "GPI-anchor transamidase complex" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0042732 "D-xylose metabolic process" evidence=RCA
MGI|MGI:1926178 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090313-46 pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1307156 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q969N2 PIGT "GPI transamidase component PIG-T" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDR1 PIGT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2G6 PIGT "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N4W0 PIGT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SD35 LOC100626091 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ASPGD|ASPL0000041881 AN1775 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh2_kg.3__735__AT3G07140.1
annotation not avaliable (647 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
scaffold_100904.1
annotation not avaliable (382 aa)
     0.749
Al_scaffold_0001_1667
annotation not avaliable (228 aa)
       0.472
fgenesh2_kg.3__3567__AT2G20390.1
annotation not avaliable (183 aa)
       0.464

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
pfam04113559 pfam04113, Gpi16, Gpi16 subunit, GPI transamidase 1e-158
>gnl|CDD|217904 pfam04113, Gpi16, Gpi16 subunit, GPI transamidase component Back     alignment and domain information
 Score =  464 bits (1196), Expect = e-158
 Identities = 185/539 (34%), Positives = 267/539 (49%), Gaps = 85/539 (15%)

Query: 16  VLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQS-RAPHSSSHG 74
           +LL   LFL A  SSSG        E++ E L L+P PD K+LA F+F+S   P SS   
Sbjct: 1   LLLFAYLFLVALASSSGLS------EDYHESLTLRPLPDSKLLASFNFRSENEPSSSFEE 54

Query: 75  RHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDV 134
           RH  LFP+++ Q+++    +E+ L FTQGRW  E WG   P +   +   GVE+WA  + 
Sbjct: 55  RHFRLFPRSLGQILQHANTRELHLRFTQGRWDAESWG-SRPWNGARSGGTGVEVWAWIEA 113

Query: 135 PQS-LVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGN------LRYGTLP 187
            Q    D  W+ LT+ LSGLFCAS+NF++S+ T   P  +F+P+         L YG+LP
Sbjct: 114 DQDEEADEKWKTLTNALSGLFCASLNFIDSTRTTR-PVFSFQPNGDGSNSNLHLLYGSLP 172

Query: 188 REAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIG 247
            E VCTENLTP+LKLLPC+ KAG+S+L+D   ++   + S  + +          +  + 
Sbjct: 173 GEVVCTENLTPFLKLLPCKGKAGISSLLDGHKLFDSSWQSMAIDVRPVCDDDQG-ECKLQ 231

Query: 248 LDQTLTVVL--------------QPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVI 293
           ++QT+ VVL              Q         + +    + SWS+S +FGR + G C +
Sbjct: 232 MEQTVDVVLDVERSKRPRLKPDTQKPCHSDDTCFPLGDTSEVSWSLSELFGRPLKGSCPL 291

Query: 294 AKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNL 353
           A SS V LQ+                                    SV       EV   
Sbjct: 292 ADSSKVCLQVP--------------------------------ESRSVNVSPGAREVKGT 319

Query: 354 HGKSTSVIYGFSVEKYSDSQPFDLGLTWK-IPVVWSCQQAPLHASRFLMGSGNERGAIAI 412
            G   +    F ++   +S PFDL L W     V +  Q  L A R L G G ERG + I
Sbjct: 320 DGFIRT----FDLD---NSTPFDLKLPWPESTTVVTSDQPVLKAERSLTGHGQERGGLRI 372

Query: 413 SLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKI 472
                 SS    T   I          F+++PW+++VY HTLQ+ +D Q +   D+++KI
Sbjct: 373 IFTNPSSS----TVEFI---------YFEILPWFVRVYLHTLQIKIDGQQKPTKDLIEKI 419

Query: 473 RVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALIS 531
              PS D+  P  +E+ + LP  S +   + +F+K  L   EYPPDAN+GFDIP+A+I+
Sbjct: 420 YYRPSVDRERPTQLELKMSLPPAS-TVTLTYDFEKSILRYTEYPPDANRGFDIPAAVIT 477


GPI (glycosyl phosphatidyl inositol) transamidase is a multi-protein complex. Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase that adds glycosylphosphatidylinositols (GPIs) to newly synthesised proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif. Length = 559

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 585
PF04113564 Gpi16: Gpi16 subunit, GPI transamidase component; 100.0
KOG2407575 consensus GPI transamidase complex, GPI16/PIG-T co 100.0
>PF04113 Gpi16: Gpi16 subunit, GPI transamidase component; InterPro: IPR007245 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex Back     alignment and domain information
Probab=100.00  E-value=1.4e-136  Score=1134.29  Aligned_cols=458  Identities=43%  Similarity=0.793  Sum_probs=406.6

Q ss_pred             CCCCceeeeEEeeeCCCCcEEEEEEEEee-cCCCCCCCcccccccHHHHHHhHhcCeeEEEEEeeeeeccccccCCCCCC
Q 007896           38 GGGEEFSEELLLKPFPDRKVLAHFHFQSR-APHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPL  116 (585)
Q Consensus        38 ~~~e~f~E~L~lkPLp~~~lla~F~F~~~-~~~~~~~~~h~~lFPr~l~qil~~~~v~ELhLsfTqGrW~~~~WG~p~p~  116 (585)
                      ..+|.|+|+|+|||||+|+++++|+|++. ...+.+..+||++|||+|+||+++++++||||+|||||||+++||+ +|.
T Consensus        17 ~~~~~f~E~L~l~PL~~~~ll~~F~F~~~~~~~~~~~~~h~~~fP~~i~~il~~~~~~elhl~fTqG~W~~~~WG~-~p~   95 (564)
T PF04113_consen   17 SASESFTEELTLKPLPDGKLLASFNFTTESSSSNNDEYQHYTLFPRSIGQILQKYNVRELHLSFTQGRWDYESWGY-PPF   95 (564)
T ss_pred             cccCceeeEEEEEECCCCCEEEEEEEEeccCccccccccccccCCHHHHHHHHhcCceEEEEEEeeccCcccccCC-CCc
Confidence            45689999999999999999999999994 3335578999999999999999999999999999999999999998 779


Q ss_pred             CCCCCCCCceEEEEEEeCCc-hhHHHHHHHHHHHhhhhhhcccccccCCceeecCcccccCCC-----CeeeEecCCCcc
Q 007896          117 SSNNAKPPGVELWAVFDVPQ-SLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSF-----GNLRYGTLPREA  190 (585)
Q Consensus       117 ~~~~~~~~GaELwA~f~~~~-~~vd~~W~~LtnaLSGLFCASLnfids~~t~~~P~~sf~p~~-----~~l~~a~LP~E~  190 (585)
                      +|.+++|+||||||||+++. +++|++|++|||+|||||||||||||+++|++ |.++|+|.+     .+++||+||+|+
T Consensus        96 ~g~~~~~~G~elwA~~~~~~~~~~d~~W~~Lt~~LsGlfCASLn~id~~~t~~-P~~~~~~~~~~~~~~~~~~~~LP~E~  174 (564)
T PF04113_consen   96 DGFKSGPTGAELWAWFEAPSDEEADERWKGLTNALSGLFCASLNFIDSTNTTS-PVFSFQPEGNGNNSLFLRYASLPREP  174 (564)
T ss_pred             cccccCCcceEEEEEecCCcchHHHHHHHHHHHHHHHHhhhcccccCCCcEEC-cceeeccCCCCCCcceEEeeeCCCCC
Confidence            99999999999999999875 45999999999999999999999999999886 999999987     489999999999


Q ss_pred             cccCChhhhhhhcCCCCCCccccccCCCcccccccceeeEEEEeecCCCCCCceeEEEEEEEEEEEcCCCccCCc-----
Q 007896          191 VCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGK-----  265 (585)
Q Consensus       191 VCTENLTPwlKLLPCk~kaGLssLL~~~~lf~s~yhS~~i~v~~~c~~~~~~~~~~~L~qtl~~V~d~~~~~~~~-----  265 (585)
                      |||||||||+||||||+|+|||+|||||++||+.||||+|||++.|++..|. |+++|+|++++|+|+.++++++     
T Consensus       175 vCTENLTP~~KLLPc~~~~GLasLL~~~~lf~s~yhS~~i~v~~~c~~~~~~-~~~~l~~~~~~V~d~~~~~~~~p~~~~  253 (564)
T PF04113_consen  175 VCTENLTPWLKLLPCKGKAGLASLLDPHKLFDSNYHSLSIDVRTICDDSTCS-CSLELEQTLTVVLDPPRSLRRRPVPGD  253 (564)
T ss_pred             cccccchhhHHhCCCCccCCHHHHcCchhhhcCCceeEEEEEEecCCCCCCc-eEEEEEeEEEEEECchhhcCCCCCccc
Confidence            9999999999999999999999999999999999999999999999998888 9999999999999999775544     


Q ss_pred             --------cc------cCCCCCCCCeeeecccCCCCCCCCcCcc-CceEEEEcCCCcccccchhhhcccccccccccccc
Q 007896          266 --------TY------SVETNIQPSWSISSIFGRNIPGKCVIAK-SSNVYLQLDNGLVGELKNLERENAKYVANTFESEG  330 (585)
Q Consensus       266 --------~~------~~~~~~~~~WSL~~lFgr~l~g~CplA~-sS~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (585)
                              +|      ..++..+.+|||++||||+|+|+||+|+ +|+|||+++...                       
T Consensus       254 ~l~cd~~k~~~~~~c~pl~~~~~~dWSl~~lFGr~i~g~CplA~~sS~V~v~v~~~~-----------------------  310 (564)
T PF04113_consen  254 ELRCDTSKPYDAWQCFPLGDSSEQDWSLSSLFGRKIPGSCPLADESSKVYVDVPEEW-----------------------  310 (564)
T ss_pred             ccccccCCCcccceeeecCCCCCCCeeHHHHhCCCCCCCCccCCCCceEEEecCCce-----------------------
Confidence                    11      1244567899999999999999999999 999999986532                       


Q ss_pred             cccCcceeEeeCCCcceeeeecccCCCcceEEEEEecCCCCCCccceeeeccc-ccccccCCCceEEEEEeecccccccc
Q 007896          331 FQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKI-PVVWSCQQAPLHASRFLMGSGNERGA  409 (585)
Q Consensus       331 ~~~~~~f~ls~~p~~~~~~~~~~~~~~~~~~~~ydl~~~s~~~~~dl~~~~~~-p~~~~~~~ppl~a~R~ltG~Gq~rGg  409 (585)
                             ++.+.+....  .    ........+|++.+.   .++||.+.|+. +..+..++|||+|+|+++||||+|||
T Consensus       311 -------~v~~~~~~~~--~----~~~~~~~~~y~l~~~---~~~dl~l~~~~~~~~~~~~~ppL~a~R~LtG~GQerGg  374 (564)
T PF04113_consen  311 -------SVSPEPGADE--Q----KTSSDNLNCYDLSES---SPFDLYLPWKNSSIVWSLPPPPLYASRSLTGYGQERGG  374 (564)
T ss_pred             -------EEeccCCceE--E----eccCCcEEEEEcCCC---CCCCeEeeccCCCccccCCCCceEEEEEEcCCCcCCCe
Confidence                   2222222111  1    123446789999865   48999999975 33445689999999999999999999


Q ss_pred             EEEEEecCCCCCCCCCccccCCCceeEEEEEeeecceeEEeeeEEEEEEcCcccccccceeEEEeeCCCCCCCCceEEEE
Q 007896          410 IAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMI  489 (585)
Q Consensus       410 l~~~i~N~~~~~~~~~~~~~~~~~~v~v~y~E~lPWy~r~YlHTL~v~~~g~~~~~~~~i~~~~y~Pa~dR~rP~~LEl~  489 (585)
                      |++.|+|++             +.+++|+|||+||||||+|+|||++++++......+++++++|+||+||+||++||+.
T Consensus       375 l~~~i~N~~-------------~~~v~i~y~E~lPWf~r~YlhTL~v~~~~~~~~~~~~i~~~~y~Pa~dr~rp~~lE~~  441 (564)
T PF04113_consen  375 LRTVITNPS-------------DTPVEIVYFESLPWFMRPYLHTLKVEVDGQPKPESDVIKSIYYSPAKDRKRPTHLELV  441 (564)
T ss_pred             EEEEEECCC-------------CCceEEEEEEeccceeeeeEEEEEEEEecCccccccceeeEeeccccccCCCceEEEE
Confidence            999999997             4689999999999999999999999999777767789999999999999999999999


Q ss_pred             EEecCCCeEEEEEEeccccccccccCCCCCCCCCccCCceeeecCcccccccccCcccCCCchhhhccccccceecccch
Q 007896          490 LKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQHALQRHHHYMHS  569 (585)
Q Consensus       490 l~lPa~~St~~ls~~FdK~fL~~~EYPPDANrGFdIp~AvIt~~~~~~~~~~~~~~~~~~spl~~~~~~~~~~~~~yt~~  569 (585)
                      ++|||+ |+++|+|||||+||||+|||||||||||||||||++++.+                     +..++ ++|||+
T Consensus       442 l~lP~~-st~~~s~~f~K~~L~~~EyPpDAnrGfdi~~avi~~~~~~---------------------~~~~~-~~~T~~  498 (564)
T PF04113_consen  442 LTLPPN-STVTLSIDFDKAFLRYTEYPPDANRGFDIPSAVITVLDPN---------------------SSSPY-RIYTES  498 (564)
T ss_pred             EEECCC-ceEEEEEEEEeeeechhhCCCCcccCcccCceEEEeecCC---------------------CCccE-EEeccc
Confidence            999998 9999999999999999999999999999999999997743                     22245 899999


Q ss_pred             hhhh
Q 007896          570 ICIV  573 (585)
Q Consensus       570 l~~~  573 (585)
                      ||+.
T Consensus       499 lLv~  502 (564)
T PF04113_consen  499 LLVS  502 (564)
T ss_pred             cccc
Confidence            9875



Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase adds glycosylphosphatidylinositols (GPIs) to newly synthesized proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif [].; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex

>KOG2407 consensus GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.0 bits (134), Expect = 3e-08
 Identities = 94/614 (15%), Positives = 163/614 (26%), Gaps = 194/614 (31%)

Query: 73  HGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVF 132
           H  HHH+           F   E +  +             D LS    +   V+ +   
Sbjct: 1   HHHHHHM----------DFETGEHQYQYK------------DILSVF--EDAFVDNFDCK 36

Query: 133 DVPQSLVDVYWR-------------NLTHTLSGLFCASINFLESSTTYSAPELTFKPSFG 179
           DV      +  +             + T  L     +     +        E   + ++ 
Sbjct: 37  DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK----QEEMVQKFVEEVLRINYK 92

Query: 180 NLRYGTLPREAVCTENLTPWL---KLLPCRDKAGLSALMDRPSIYRGFYHSQR------L 230
            L         + TE   P +     +  RD+     L +   ++   Y+  R      L
Sbjct: 93  FLM------SPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQVFAK-YNVSRLQPYLKL 140

Query: 231 R--LTSSESGSDEV---DSGIGLDQTLTV-VLQPSS----------WRT-GKTYSVETNI 273
           R  L       + +     G G    + + V               W       S ET +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSG-KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 274 QPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKY---------VAN 324
           +    +      N   +     SSN+ L++ + +  EL+ L +    Y         V N
Sbjct: 200 EMLQKLLYQIDPNWTSRS--DHSSNIKLRIHS-IQAELRRLLKSK-PYENCLLVLLNVQN 255

Query: 325 TFESEGFQSNHAFKISV-TPDK-VFEEVDNLHGKSTSVI---YGFSVE-------KYSDS 372
                 F  N + KI + T  K V + +        S+       + +       KY D 
Sbjct: 256 AKAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 373 QPFDLGLTWKIPVVWSCQQAPLHASRF--LMGSGNERGAIAISLEPTESSEGLPTSHIID 430
           +P DL      P        P   S     +  G          +  +       + II 
Sbjct: 314 RPQDL------PRE-VLTTNPRRLSIIAESIRDGLAT------WDNWKHVNCDKLTTII- 359

Query: 431 GRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSK------DKVSPG 484
              E  +++ +  P   +  F  L VF              I   P+         V   
Sbjct: 360 ---ESSLNVLE--PAEYRKMFDRLSVFPP-------SA--HI---PTILLSLIWFDVIKS 402

Query: 485 VMEMILKLPCGSKSAAF-----------SLEFD-------KGFLH---IDEY-PPDANQG 522
            + +++       S              S+  +       +  LH   +D Y  P     
Sbjct: 403 DVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 523 FDIPSALIS--FPSF------NARMNFSEDEF----LNNSPILSKFQHA----------- 559
            D+    +   F S       N         F    L+   +  K +H            
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 560 --LQRHHHYMHSIC 571
             LQ+   Y   IC
Sbjct: 522 NTLQQLKFYKPYIC 535


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00