Citrus Sinensis ID: 008498


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560---
MASADNGKHKKEIEESNDTQAKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIRLLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESVRPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRSDPNSPNVNSSSTPKKSIGNPPSPSRFSKEYYSPERQLYAIEEPSAKGKDETMSPPAPSLIQREYS
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHccccHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHcccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHcccccccccccccccccHcccEEEEEEcHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHcHHHHcccccccHHHccccHcccccccccccccEEEccccccccccccccccHEEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccHHHHHHHHHccccEEEccccEEEEccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccc
masadngkhkkeieesndtqaknqgqipldisssrktllsgekpggrsvsmFSSIPNRIRLLKFGSASNKFKQIAEQRDEISRSVacssgshgfrdrlngvftrKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLnkaiprksqrDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYckngtykpheWAHMMVVVILLNLNCFAQYALCglnvgyrrsdrpaigvGICISVAIgapafagvysmmsplgkdydsqrdeeaqvpittgesvrpdqLRLKSLEKRysfassdeqkvvvnqprwsggildIWNDISLAYLSLFCTFCvfgwnmerlgfgnMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLyggfwriqlrkrfnlpaynfccghpaisdctlwlcccwctlaqeartgNAYEIIEDKFCrkqmdngdqlsplpredgmvqfrsdpnspnvnssstpkksignppspsrfskeyysperqlyaieepsakgkdetmsppapsliqreys
masadngkhkkeieesndtqaknqgqipldisssrktllsgekpggrsvsmfssIPNRIRLLKFGSASNKFKQIAEQRDEISRSvacssgshgfrdrlngvftrkvdwVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAqvpittgesvrpdqlrLKSLEKRysfassdeqkvvvnqprWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRSdpnspnvnssstpkksignppspsrFSKEYYSPERQLYAieepsakgkdetmsppapsliqreys
MASADNGKHKKEIEESNDTQAKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIRLLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESVRPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDctlwlcccwctlAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRsdpnspnvnssstpkksIGNPPSPSRFSKEYYSPERQLYAIEEPSAKGKDETMSPPAPSLIQREYS
**********************************************************IRLLKF***************************HGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMM***********************************************KVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCR****************************************************************************************
******************************************************************************************************TRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGK************************************************PRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDK*******************************************************************************************
************************GQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIRLLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESVRPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRSD************************FSKEYYSPERQLYAIEEPS**********PAPSLIQREYS
*************************************************SMFSSIPNRIRLLKFGSASNKFKQIAEQRDEIS**********GFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGK*****************************************QKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMD*GDQLSPLPREDGMVQFR******************************************************************
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MASADNGKHKKEIEESNDTQAKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIRLLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESVRPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRSDPNSPNVNSSSTPKKSIGNPPSPSRFSKEYYSPERQLYAIEEPSAKGKDETMSPPAPSLIQREYS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
359486472555 PREDICTED: uncharacterized protein LOC10 0.976 0.990 0.718 0.0
255559599556 conserved hypothetical protein [Ricinus 0.980 0.992 0.705 0.0
356501197558 PREDICTED: uncharacterized protein LOC10 0.982 0.991 0.670 0.0
357492897561 hypothetical protein MTR_5g083740 [Medic 0.985 0.989 0.635 0.0
449441268553 PREDICTED: uncharacterized protein LOC10 0.980 0.998 0.631 0.0
356540022565 PREDICTED: uncharacterized protein LOC10 0.985 0.982 0.646 0.0
449499216547 PREDICTED: uncharacterized protein LOC10 0.920 0.946 0.656 0.0
312282559554 unnamed protein product [Thellungiella h 0.964 0.980 0.626 0.0
240255323563 PLAC8 family protein [Arabidopsis thalia 0.973 0.973 0.633 0.0
297829648563 hypothetical protein ARALYDRAFT_478442 [ 0.971 0.971 0.630 0.0
>gi|359486472|ref|XP_002274097.2| PREDICTED: uncharacterized protein LOC100248412 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/564 (71%), Positives = 471/564 (83%), Gaps = 14/564 (2%)

Query: 1   MASADNGKHKKEIEESNDTQAKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIR 60
           M S DNG+ K+EIEESN +  K +G +PL IS+S++ L+S E         F     R+R
Sbjct: 1   MVSTDNGELKEEIEESNGS--KVEGLVPLHISTSQRGLISDEDTKKGFKKRFL---GRVR 55

Query: 61  LLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIR 120
           LLKFGSA  KF+Q+AE RDE+SR+V   S SH  R+R N VF RK+DWVS++KMCKEWIR
Sbjct: 56  LLKFGSA--KFRQLAEGRDELSRAVP--SSSHHIRERFNEVFMRKIDWVSLRKMCKEWIR 111

Query: 121 NPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLY 180
           +PMNMAL AW++CVAVSGAILFLV+TGMLN  +P+KSQRD WFEVNNQILNALFTLMCLY
Sbjct: 112 DPMNMALFAWIVCVAVSGAILFLVMTGMLNHELPKKSQRDAWFEVNNQILNALFTLMCLY 171

Query: 181 QHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCG 240
           QHPKR YHLVLL RW P+DI+KLRKIYCKNGTYKPHEWAHMMVVVILL++NCFAQYALCG
Sbjct: 172 QHPKRFYHLVLLCRWRPEDISKLRKIYCKNGTYKPHEWAHMMVVVILLHINCFAQYALCG 231

Query: 241 LNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESV 300
           LN+GYRRS+RPAIGVGICI+VAIGAPA AGVY+++SPLGK+YDS+ DEEAQVPITT +S 
Sbjct: 232 LNLGYRRSERPAIGVGICIAVAIGAPAIAGVYTIVSPLGKEYDSETDEEAQVPITT-DSN 290

Query: 301 RPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNM 360
           R  QLR KS+E+R+SFAS DEQ+VV ++P WSGG+LD W+DISLAYLSLFC+FCVFGWNM
Sbjct: 291 RSSQLRRKSMERRFSFASRDEQRVVESRPEWSGGVLDFWDDISLAYLSLFCSFCVFGWNM 350

Query: 361 ERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFW 420
           ERLGFGNMYVHIATF+LFCMAPFWIF LAAVNIDN+ AR AL   G+ILC+FGLLYGGFW
Sbjct: 351 ERLGFGNMYVHIATFLLFCMAPFWIFNLAAVNIDNDTARAALGTMGLILCVFGLLYGGFW 410

Query: 421 RIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDN 480
           RIQ+RKRFNLPAY+FCCG PA++DC LWLCCCWC+L+QE RTGN+Y+I+E+ FCRK+MD 
Sbjct: 411 RIQMRKRFNLPAYHFCCGEPAVTDCALWLCCCWCSLSQEVRTGNSYDIVENTFCRKKMDG 470

Query: 481 GDQL--SPLPREDGMVQFRSDPNSPNVNSSSTPKKSIGNPPSPSRFSKEYYSPERQLYAI 538
           G QL  SPLPREDG+ Q RS  +SP  NS+S P K I   PS SR SK YYSPER L  +
Sbjct: 471 GSQLPISPLPREDGVSQIRSGSSSPLGNSAS-PLKIIAASPSSSRASKGYYSPERNLPVV 529

Query: 539 EEPS-AKGKDETMSPPAPSLIQRE 561
           EE S A GKDE M PP PSLI+RE
Sbjct: 530 EEESPAGGKDEIMIPPVPSLIRRE 553




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559599|ref|XP_002520819.1| conserved hypothetical protein [Ricinus communis] gi|223539950|gb|EEF41528.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356501197|ref|XP_003519413.1| PREDICTED: uncharacterized protein LOC100795088 [Glycine max] Back     alignment and taxonomy information
>gi|357492897|ref|XP_003616737.1| hypothetical protein MTR_5g083740 [Medicago truncatula] gi|355518072|gb|AES99695.1| hypothetical protein MTR_5g083740 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449441268|ref|XP_004138404.1| PREDICTED: uncharacterized protein LOC101219709 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356540022|ref|XP_003538490.1| PREDICTED: uncharacterized protein LOC100811964 [Glycine max] Back     alignment and taxonomy information
>gi|449499216|ref|XP_004160753.1| PREDICTED: uncharacterized protein LOC101232791 [Cucumis sativus] Back     alignment and taxonomy information
>gi|312282559|dbj|BAJ34145.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|240255323|ref|NP_187709.5| PLAC8 family protein [Arabidopsis thaliana] gi|17064778|gb|AAL32543.1| Unknown protein [Arabidopsis thaliana] gi|23197822|gb|AAN15438.1| Unknown protein [Arabidopsis thaliana] gi|332641466|gb|AEE74987.1| PLAC8 family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297829648|ref|XP_002882706.1| hypothetical protein ARALYDRAFT_478442 [Arabidopsis lyrata subsp. lyrata] gi|297328546|gb|EFH58965.1| hypothetical protein ARALYDRAFT_478442 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
TAIR|locus:2085502563 AT3G10980 "AT3G10980" [Arabido 0.975 0.975 0.613 7e-180
TAIR|locus:2153544526 AT5G05350 "AT5G05350" [Arabido 0.815 0.872 0.638 1.3e-164
TAIR|locus:2200081254 AT1G11380 "AT1G11380" [Arabido 0.168 0.374 0.3 0.00069
TAIR|locus:2085502 AT3G10980 "AT3G10980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
 Identities = 352/574 (61%), Positives = 415/574 (72%)

Query:     1 MASADNGKHKKEIEESNDTQAKNQG--QIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNR 58
             M S  +G  K EIEESN +  KN      PLD+S+SR+TL+   KP   S+S      +R
Sbjct:     1 MGSNCDGNLKAEIEESNGSSGKNTKVPPCPLDVSTSRRTLIGDGKPRRWSISALPDASSR 60

Query:    59 IRLLKFGSASNKFKQIAEQRDEISRSVACSSG--SHGFRDRLNGVFTRKVDWVSIKKMCK 116
              +LLKFGS S KFK++AE RDE+SRSV  SS   SH FR+R++GV  RK+DW S+  M K
Sbjct:    61 FQLLKFGSPSAKFKKMAEDRDEVSRSVTSSSNGSSHNFRERISGVLHRKIDWSSLMNMGK 120

Query:   117 EWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTL 176
             EWIRNP+NMAL  W++ VAVSGAILF+V+TGMLN A+P+KSQRD WFEVNNQILN LFTL
Sbjct:   121 EWIRNPINMALFVWILVVAVSGAILFMVMTGMLNHALPKKSQRDAWFEVNNQILNGLFTL 180

Query:   177 MCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQY 236
             MCLYQHPKR YHLVLL RW   DI KLRK YCK+GTYKP+EW H+MVVVILL+LNCFAQY
Sbjct:   181 MCLYQHPKRFYHLVLLCRWKHDDITKLRKAYCKDGTYKPNEWMHIMVVVILLHLNCFAQY 240

Query:   237 ALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDY-DSQRDEEAQVPIT 295
             ALCGLNVGYRRS+RP IGV ICIS AIGAPA AG+Y+++SPLGKDY DS  DEE Q+   
Sbjct:   241 ALCGLNVGYRRSERPPIGVAICISAAIGAPAVAGLYTILSPLGKDYNDSNEDEENQLKQR 300

Query:   296 TGESVRPDQLRLKSLEKRYSFASSD----EQKVVVNQPRWSGGILDIWNDISLAYLSLFC 351
                SV     R  +LE+RYSFAS+     +  V V+ P+WSGGILDIW+DISLAYLSLFC
Sbjct:   301 EEGSVN----RRFTLERRYSFASASTGVGDGMVPVSDPQWSGGILDIWDDISLAYLSLFC 356

Query:   352 TFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCL 411
             TFCVFGWNMER+GFGNMYVHIATFILFC+APF+IF LAAVNIDNE  REAL ++GI+LC+
Sbjct:   357 TFCVFGWNMERVGFGNMYVHIATFILFCLAPFFIFNLAAVNIDNETVREALGISGILLCV 416

Query:   412 FGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDXXXXXXXXXXXXAQEARTGNAYEIIED 471
             FGLLYGGFWRIQ+RKRF LP+YNFC G  AI+D            AQE RT N+YEI+ED
Sbjct:   417 FGLLYGGFWRIQMRKRFKLPSYNFCFGRAAIADCALWLCCCWCSLAQEVRTANSYEIVED 476

Query:   472 KFCR----KQMDNGDQLSPLPREDGMVQFRXXXXXXXXXXXXXXXXXIGNPPSPSRFSKE 527
             KFC+    K M + + +SPLPREDG+   R                     PSPSRF KE
Sbjct:   477 KFCQRKEEKNMVSPNLVSPLPREDGVFDPRFGLGSSPKNISGASS------PSPSRFWKE 530

Query:   528 YYSPERQLYAIEEPSAKGKDETMSPPAPSLIQRE 561
              +SP  Q    E+   K  D  ++PP+P  I RE
Sbjct:   531 AHSPNVQTPR-EKEEVKS-DVALTPPSPLSIHRE 562




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2153544 AT5G05350 "AT5G05350" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200081 AT1G11380 "AT1G11380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
TIGR01571104 TIGR01571, A_thal_Cys_rich, uncharacterized Cys-ri 4e-26
pfam1120481 pfam11204, DUF2985, Protein of unknown function (D 8e-24
pfam0474999 pfam04749, PLAC8, PLAC8 family 3e-22
>gnl|CDD|233473 TIGR01571, A_thal_Cys_rich, uncharacterized Cys-rich domain Back     alignment and domain information
 Score =  102 bits (255), Expect = 4e-26
 Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 331 WSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAA 390
           WS G+ D   DI L    LFC  C+FG   E LG         TF   C+    +  +A 
Sbjct: 3   WSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLG---------TFAGECLCGG-LTAIAM 52

Query: 391 VNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDCTLWLC 450
             +                C F   Y  F RI+LR+++ +       G P   DC   L 
Sbjct: 53  SAL----------------CGFCGCYTCFIRIKLREKYGIQ------GAPCD-DCLTHLF 89

Query: 451 CCWCTLAQEART 462
           CC+C L QE R 
Sbjct: 90  CCFCALCQEHRE 101


This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family. Length = 104

>gnl|CDD|192721 pfam11204, DUF2985, Protein of unknown function (DUF2985) Back     alignment and domain information
>gnl|CDD|218240 pfam04749, PLAC8, PLAC8 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 563
PF1120481 DUF2985: Protein of unknown function (DUF2985); In 100.0
TIGR01571104 A_thal_Cys_rich uncharacterized Cys-rich domain. T 99.94
PF04749106 PLAC8: PLAC8 family; InterPro: IPR006461 This grou 99.91
>PF11204 DUF2985: Protein of unknown function (DUF2985); InterPro: IPR021369 This eukaryotic family of proteins has no known function Back     alignment and domain information
Probab=100.00  E-value=7.4e-40  Score=277.00  Aligned_cols=81  Identities=46%  Similarity=0.821  Sum_probs=79.9

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcCcceEEehHHHHHHHHHhhcccccchhhhhhheeeee
Q 008498          116 KEWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRW  195 (563)
Q Consensus       116 ~~~~~tP~g~~~~iy~l~VvawGamLfLlL~g~ln~~~p~~s~R~~WiEi~sQILNALFtv~g~gl~P~R~~dly~l~rw  195 (563)
                      |+|+|||+||++|+|++||++|||||||+|+||+|...|++|+|++|||||||||||||||||+||||||++|||+|+||
T Consensus         1 w~~~~tP~g~~i~iy~~~V~~~Ga~lfllL~g~~~~~~~~~s~r~~WiEi~sQILnALF~v~g~gl~P~R~~d~y~l~~~   80 (81)
T PF11204_consen    1 WKWVKTPMGFAITIYGLNVVAWGAMLFLLLCGMLNAMCHNKSPRDIWIEIDSQILNALFTVMGFGLHPWRFRDLYHLLRW   80 (81)
T ss_pred             CcchhchhhHHHHHHHHHHHHHHHHHHHHHHccchhccCCCccceEEEEehhHHHHHHHHHHhhccccHHHHHHHHHhee
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q 008498          196 S  196 (563)
Q Consensus       196 r  196 (563)
                      |
T Consensus        81 r   81 (81)
T PF11204_consen   81 R   81 (81)
T ss_pred             C
Confidence            7



>TIGR01571 A_thal_Cys_rich uncharacterized Cys-rich domain Back     alignment and domain information
>PF04749 PLAC8: PLAC8 family; InterPro: IPR006461 This group of sequences are described by a region of about 170 amino acids Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.8 bits (123), Expect = 5e-07
 Identities = 43/312 (13%), Positives = 90/312 (28%), Gaps = 100/312 (32%)

Query: 15  ESNDTQAKNQGQ-IPLDISSSRKTL--LSGEKPGGRS------VSMFSSIPNRIRLLKFG 65
           + N T   +    I L I S +  L  L   KP          V                
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ----NAKAWNAFNLS 265

Query: 66  SASNKFKQIAEQRD-EISRSVACSSGSHGFRDRLNGVFTRK------VDWVSIKK----- 113
                 K +   R  +++  ++ ++ +H   D  +   T        + ++  +      
Sbjct: 266 C-----KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 114 -MCKEWIRNPMNMALLA---------W-----VICVAVSGAI-LFL-VLTGMLNKA---- 152
            +      NP  ++++A         W     V C  ++  I   L VL     +     
Sbjct: 321 EVLT---TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 153 ---------IPRKSQRDVWFEVNNQ----ILNALFTLMCLYQHPK----RLYHLVLLFRW 195
                    IP      +WF+V       ++N L     + + PK     +  + L  + 
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV 437

Query: 196 SPKDIAKL-RKI---------YCKNGTYKPHE---WA-----HMMVV----------VIL 227
             ++   L R I         +  +    P+    +      H+  +          ++ 
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 228 LNLNCFAQYALC 239
           L+   F +  + 
Sbjct: 498 LDFR-FLEQKIR 508


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00