Citrus Sinensis ID: 008640

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------56

MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEVSTWFIPPTCLSNYLPQLS

cccccccccccccccccEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccccccHHHHHcccHHHccccccccccccEEEEEEEccccEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcHHHcccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHcccccccEEEcccccccccccccccccEEEEEEccEEEEEccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccHHHHHcEEccccccccccccHHHHccccc

ccccccHHcccccHHHHHHEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEccccccccHHHHHHccHHHHHHccccccccEEEEEEEEcccccEEEEEEEEccccccccccEEEccccHHHHHHHHHHHHHHccccccccccEcccccccccccEccccHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccccccEEEEEEccccccccccccccccccccccccccccccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEcccEEEEcccccccccEEEccccccccEEcccccccccccccccccccccHHHHHHHHHHccccHHHHHHcccccEEEEccccccccccccccEcEEEEEEcEEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccEEEEEcHHHHHHEHHcccHHcccccHHHHHHHHcc

MMGYANMEQIASGIHFRLRARTfivaepqgnrvVFVNLDACMASQIVKIKVIERLKARYgdlyteknvaisgihthagpggYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHenlrpgsifvnkgelldasisrspsaylnnpasergkykynVDKEMTLLKfvddqwgpvgsfnwfathgtsmsrtnslisgdnKGAAARFMEDWfeqsnaghssadelvsegiprrVSDIISDFRNNHHELLELAasfqsppgkaATKILSVARRVRGILReaekpgfvsafcqsncgdvspnvlgafcidsglpcdfnhstcggknemcygrgpgypdefestrIIGERQFRKAVDLFNKASEKlegkidyrhsyldfsqlevtipkqnggsetvktcpaamgfafaagttdgpgafdftqgddkgnpFWRLVRDLLkkpdkeqincqypkpilldtgemkqpydwapsilpiqilQVGQLVILsvpgefttmAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYevstwfipptclsnylpqls

MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISrspsaylnnpasergkYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLElaasfqsppgkAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLlkkpdkeqincqypkpilldtGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVvtttgesnsnvHVVLAGLTNSYSQYVTTFEEYQVQRYEVStwfipptclsnylpqls

MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCpaamgfafaagttdgpgafdFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEVSTWFIPPTCLSNYLPQLS

********QIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLD*******************KYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGT*******************FM*DW***********************SDIISDFRNNHHELLELAA********AATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEVSTWFIPPTCLSNYL****

*MG*****QIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASF*********KILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCY****G*PDEFESTRIIGERQFRKAV**************DYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEVSTWFIPPTCLSNYLPQL*

**GYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEVSTWFIPPTCLSNYLPQLS

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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		558	2.2.26 [Sep-21-2011]
Q304B9		757	Neutral ceramidase OS=Ara	no	no	0.982	0.723	0.742	0.0
Q0JL46		785	Neutral ceramidase OS=Ory	yes	no	0.992	0.705	0.727	0.0
Q55G11		718	Neutral ceramidase B OS=D	yes	no	0.874	0.679	0.439	1e-128
Q9VA70		704	Neutral ceramidase OS=Dro	yes	no	0.863	0.684	0.396	1e-116
Q5W7F1		743	Neutral ceramidase OS=Dan	yes	no	0.867	0.651	0.413	1e-116
Q9NR71		780	Neutral ceramidase OS=Hom	yes	no	0.869	0.621	0.407	1e-115
Q29C43		704	Neutral ceramidase OS=Dro	yes	no	0.863	0.684	0.395	1e-115
Q91XT9		761	Neutral ceramidase OS=Rat	yes	no	0.869	0.637	0.402	1e-113
P0C7U2		622	Putative neutral ceramida	no	no	0.779	0.699	0.399	1e-101
Q54BK2		714	Neutral ceramidase A OS=D	no	no	0.474	0.371	0.516	6e-76

>sp\|Q304B9\|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	Back alignment and function desciption

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/559 (74%), Positives = 478/559 (85%), Gaps = 11/559 (1%)

Query: 1   MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
           MMGYAN +QIASGIHFRLRAR FIVAEPQGNRVVFVNLDACMASQIV IKV+ERLKARYG
Sbjct: 44  MMGYANSDQIASGIHFRLRARAFIVAEPQGNRVVFVNLDACMASQIVTIKVLERLKARYG 103

Query: 61  DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRP 120
           +LYTEKNVAISGIHTHAGPGGYLQYV YIVTSLGFVRQSFD +V+GIE+S++QAHE+LRP
Sbjct: 104 ELYTEKNVAISGIHTHAGPGGYLQYVTYIVTSLGFVRQSFDVVVNGIEQSIVQAHESLRP 163

Query: 121 GSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWF 180
           GS FVNKG+LLDA ++RSPS+YLNNPA+ER KYKY+VDKEMTL+KFVD Q GP GSFNWF
Sbjct: 164 GSAFVNKGDLLDAGVNRSPSSYLNNPAAERSKYKYDVDKEMTLVKFVDSQLGPTGSFNWF 223

Query: 181 ATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFR 240
           ATHGTSMSRTNSLISGDNKGAAARFMEDWFE     +   + + S  IPRRVS I+SDF 
Sbjct: 224 ATHGTSMSRTNSLISGDNKGAAARFMEDWFE-----NGQKNSVSSRNIPRRVSTIVSDFS 278

Query: 241 NNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVL 300
            N   LL++AA+++S  G +  K L V  RVR       K  FVSAFCQSNCGDVSPN L
Sbjct: 279 RNRDRLLDIAATYKSSRGHSVDKSLDVKTRVR----NGSKRKFVSAFCQSNCGDVSPNTL 334

Query: 301 GAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK 360
           G FCID+GLPCDFNHSTC G+NE+CYGRGPGYPDEFESTRIIGE+QF+ AV+LFNKA+EK
Sbjct: 335 GTFCIDTGLPCDFNHSTCNGQNELCYGRGPGYPDEFESTRIIGEKQFKMAVELFNKATEK 394

Query: 361 LEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDD 420
           L+GKI Y+H+YLDFS L+VT+PK  GGSETVKTCPAAMGF FAAGTTDGPGAFDF QGDD
Sbjct: 395 LQGKIGYQHAYLDFSNLDVTVPKAGGGSETVKTCPAAMGFGFAAGTTDGPGAFDFKQGDD 454

Query: 421 KGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVIL 480
           +GN FWRLVR++L+ P  EQ+ CQ PKPILLDTGEMK+PYDWAPSILPIQIL++GQLVIL
Sbjct: 455 QGNVFWRLVRNVLRTPGPEQVQCQKPKPILLDTGEMKEPYDWAPSILPIQILRIGQLVIL 514

Query: 481 SVPGEFTTMAGRRLRDAVKTVVTTTG--ESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRY 538
           SVPGEFTTMAGRRLRDA+K+ + ++   E ++N+HVV+AGLTN+YSQY+ TFEEY+VQRY
Sbjct: 515 SVPGEFTTMAGRRLRDAIKSFLISSDPKEFSNNMHVVIAGLTNTYSQYIATFEEYEVQRY 574

Query: 539 EVSTWFIPPTCLSNYLPQL 557
           E ++       L+ Y+ + 
Sbjct: 575 EGASTLYGRHTLTAYIQEF 593

Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 3

>sp\|Q0JL46\|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1	Back alignment and function description

>sp\|Q55G11\|NCSEB_DICDI Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1	Back alignment and function description

>sp\|Q9VA70\|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1	Back alignment and function description

>sp\|Q5W7F1\|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1	Back alignment and function description

>sp\|Q9NR71\|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2	Back alignment and function description

>sp\|Q29C43\|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1	Back alignment and function description

>sp\|Q91XT9\|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1	Back alignment and function description

>sp\|P0C7U2\|ASA2C_HUMAN Putative neutral ceramidase C OS=Homo sapiens GN=ASAH2C PE=2 SV=1	Back alignment and function description

>sp\|Q54BK2\|NCSEA_DICDI Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		558
255558846		772	ceramidase, putative [Ricinus communis]	0.998	0.721	0.840	0.0
359478575		810	PREDICTED: neutral ceramidase-like [Viti	0.998	0.687	0.808	0.0
297745965		806	unnamed protein product [Vitis vinifera]	0.998	0.691	0.808	0.0
15222380		779	Neutral/alkaline non-lysosomal ceramidas	0.998	0.715	0.794	0.0
8778548		808	F22G5.28 [Arabidopsis thaliana]	0.998	0.689	0.794	0.0
357495253		792	Neutral ceramidase [Medicago truncatula]	0.996	0.702	0.765	0.0
297849032		776	ceramidase family protein [Arabidopsis l	0.998	0.717	0.792	0.0
356552320		768	PREDICTED: neutral ceramidase-like isofo	0.998	0.725	0.797	0.0
356501679		768	PREDICTED: neutral ceramidase-like [Glyc	0.998	0.725	0.786	0.0
449455048		756	PREDICTED: neutral ceramidase-like [Cucu	0.998	0.736	0.785	0.0

>gi\|255558846\|ref\|XP_002520446.1\| ceramidase, putative [Ricinus communis] gi\|223540288\|gb\|EEF41859.1\| ceramidase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  974 bits (2518), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/558 (84%), Positives = 516/558 (92%), Gaps = 1/558 (0%)

Query: 1   MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
           MMGYAN +QIASG+HFRLRARTFIVAEPQGNRVVFVNLDACMASQIV IKV+ERLKARYG
Sbjct: 51  MMGYANTDQIASGVHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVTIKVLERLKARYG 110

Query: 61  DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRP 120
           DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKS++QAH+NLRP
Sbjct: 111 DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSIVQAHKNLRP 170

Query: 121 GSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWF 180
           GSIFVNKGELLDA ++RSPSAYLNNPA ER KYKY+VDKEMTLLKFVDD+WGP+GSFNWF
Sbjct: 171 GSIFVNKGELLDAGVNRSPSAYLNNPAEERNKYKYDVDKEMTLLKFVDDEWGPIGSFNWF 230

Query: 181 ATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFR 240
           ATHGTSMSRTNSLISGDNKGAAARFMEDWFE   AG S  DE V++  PRRVS II +  
Sbjct: 231 ATHGTSMSRTNSLISGDNKGAAARFMEDWFENKGAGISYFDESVADETPRRVSSIIPNMH 290

Query: 241 NNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVL 300
           +NHHELLELAASFQ+PPG+ ATKIL+VARRVR  LR+A+KPGFVSAFCQSNCGDVSPNVL
Sbjct: 291 DNHHELLELAASFQAPPGRPATKILNVARRVRSSLRQADKPGFVSAFCQSNCGDVSPNVL 350

Query: 301 GAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK 360
           GAFCID+GLPCDFNHSTCGGKNE+CYGRGPGYPDEFESTRIIGERQFRKAV+LFNKASE+
Sbjct: 351 GAFCIDTGLPCDFNHSTCGGKNELCYGRGPGYPDEFESTRIIGERQFRKAVELFNKASEE 410

Query: 361 LEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDD 420
           L GK+DYRHSY+DFSQLEVT+PK+ GGSETVKTCPAAMGFAFAAGTTDGPGAFDF QGDD
Sbjct: 411 LNGKVDYRHSYIDFSQLEVTLPKEGGGSETVKTCPAAMGFAFAAGTTDGPGAFDFKQGDD 470

Query: 421 KGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVIL 480
           KGN FWRLVR+ LK P+KEQI+CQ+PKPILLDTGEMKQPYDWAPS+LP+QI++VGQLVIL
Sbjct: 471 KGNTFWRLVRNFLKTPNKEQIDCQHPKPILLDTGEMKQPYDWAPSVLPVQIVRVGQLVIL 530

Query: 481 SVPGEFTTMAGRRLRDAVKTVVTTTG-ESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYE 539
           SVPGEFTTM+GR LRDAVKTV+T+   E N+NVHVV+AGLTN+YSQYVTTFEEY+VQRYE
Sbjct: 531 SVPGEFTTMSGRHLRDAVKTVLTSGNREFNNNVHVVIAGLTNTYSQYVTTFEEYEVQRYE 590

Query: 540 VSTWFIPPTCLSNYLPQL 557
            ++    P  LS Y+ + 
Sbjct: 591 GASTLFGPHTLSAYIQEF 608

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359478575\|ref\|XP_002279962.2\| PREDICTED: neutral ceramidase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297745965\|emb\|CBI16021.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|15222380\|ref\|NP_172218.1\| Neutral/alkaline non-lysosomal ceramidase [Arabidopsis thaliana] gi\|332189995\|gb\|AEE28116.1\| Neutral/alkaline non-lysosomal ceramidase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|8778548\|gb\|AAF79556.1\|AC022464_14 F22G5.28 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|357495253\|ref\|XP_003617915.1\| Neutral ceramidase [Medicago truncatula] gi\|355519250\|gb\|AET00874.1\| Neutral ceramidase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297849032\|ref\|XP_002892397.1\| ceramidase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297338239\|gb\|EFH68656.1\| ceramidase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356552320\|ref\|XP_003544516.1\| PREDICTED: neutral ceramidase-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|356501679\|ref\|XP_003519651.1\| PREDICTED: neutral ceramidase-like [Glycine max]	Back alignment and taxonomy information

>gi\|449455048\|ref\|XP_004145265.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus] gi\|449472726\|ref\|XP_004153679.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus] gi\|449516248\|ref\|XP_004165159.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		558
TAIR\|locus:2025042		779	AT1G07380 [Arabidopsis thalian	0.996	0.713	0.759	3.3e-237
TAIR\|locus:2065685		792	AT2G38010 [Arabidopsis thalian	0.550	0.387	0.638	3.1e-214
TAIR\|locus:2154598		733	AT5G58980 [Arabidopsis thalian	0.630	0.480	0.666	7e-125
DICTYBASE\|DDB_G0268374		718	dcd2B "neutral/alkaline nonlys	0.487	0.378	0.491	2.2e-122
DICTYBASE\|DDB_G0293538		714	dcd2A "neutral/alkaline nonlys	0.476	0.372	0.471	4.7e-116
ZFIN\|ZDB-GENE-041112-1		743	asah2 "N-acylsphingosine amido	0.480	0.360	0.439	1.1e-112
UNIPROTKB\|F1NN67		779	ASAH2 "Uncharacterized protein	0.473	0.338	0.447	7.9e-112
UNIPROTKB\|E2QVL9		782	ASAH2 "Uncharacterized protein	0.492	0.351	0.421	7.1e-111
UNIPROTKB\|Q9NR71		780	ASAH2 "Neutral ceramidase" [Ho	0.473	0.338	0.425	6.3e-110
RGD\|69410		761	Asah2 "N-acylsphingosine amido	0.491	0.360	0.438	2.7e-109

TAIR\|locus:2025042 AT1G07380 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2287 (810.1 bits), Expect = 3.3e-237, P = 3.3e-237
 Identities = 424/558 (75%), Positives = 483/558 (86%)

Query:     1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
             MMGYANMEQ+ASGIHFRLRARTFIV+EPQG RVVFVNLDACMASQIVK+KVIERLKARYG
Sbjct:    55 MMGYANMEQVASGIHFRLRARTFIVSEPQGKRVVFVNLDACMASQIVKLKVIERLKARYG 114

Query:    61 DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRP 120
             DLYTE+NV ISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIE S++QAHENLRP
Sbjct:   115 DLYTEQNVGISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIENSIIQAHENLRP 174

Query:   121 GSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWF 180
             GSIF+N GELLDA ++RSPSAYLNNP+ ER K+KYNVDKEMTLLKFVDDQWGPVGSFNWF
Sbjct:   175 GSIFLNNGELLDAGVNRSPSAYLNNPSKERSKHKYNVDKEMTLLKFVDDQWGPVGSFNWF 234

Query:   181 ATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFR 240
             ATHGTSMSRTNSLISGDNKGAA+RFMEDW+EQ+ A  S ++E +S+ IPRRVS +I + +
Sbjct:   235 ATHGTSMSRTNSLISGDNKGAASRFMEDWYEQNTAERSYSEEFISDEIPRRVSSLIENHQ 294

Query:   241 NNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVL 300
             ++HHELLELA+ F+S PGK  T+I S ARRVR  LR+A+KPGFVSAFCQ+NCGDVSPNVL
Sbjct:   295 DSHHELLELASYFESQPGKPVTRISSSARRVRSALRKADKPGFVSAFCQTNCGDVSPNVL 354

Query:   301 GAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK 360
             GAFC+D+GLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQF+ A++LFNKASE+
Sbjct:   355 GAFCLDTGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFKMALELFNKASEQ 414

Query:   361 LEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDD 420
             L+GK+DYRH Y+DFSQL VT+PK++G SE VKTC                    FTQGDD
Sbjct:   415 LQGKVDYRHVYVDFSQLNVTLPKKDGKSEVVKTCPAAMGFAFAAGTTDGPGAFDFTQGDD 474

Query:   421 KGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVIL 480
             KGNPFWRLVR++LK PDK+QI+C YPKPILLDTGEM +PYDWAPSIL +Q+L++GQL IL
Sbjct:   475 KGNPFWRLVRNVLKTPDKKQIDCHYPKPILLDTGEMTKPYDWAPSILSLQVLRIGQLFIL 534

Query:   481 SVPGEFTTMAGRRLRDAVKTVVTTTGESN--SNVHVVLAGLTNSYSQYVTTFEEYQVQRY 538
             SVPGEFTTMAGRRLR AVKT +  +G  +    +HVV+AGL N YSQYVTTFEEYQVQRY
Sbjct:   535 SVPGEFTTMAGRRLRYAVKTQLKNSGNKDLSGEIHVVIAGLANGYSQYVTTFEEYQVQRY 594

Query:   539 EVSTWFIPPTCLSNYLPQ 556
             E ++    P  LS Y+ +
Sbjct:   595 EGASTLYGPHTLSGYIQE 612

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0017040 "ceramidase activity" evidence=ISS

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR\|locus:2065685 AT2G38010 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154598 AT5G58980 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0268374 dcd2B "neutral/alkaline nonlysosomal ceramidase family protein" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0293538 dcd2A "neutral/alkaline nonlysosomal ceramidase family protein" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041112-1 asah2 "N-acylsphingosine amidohydrolase 2" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NN67 ASAH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E2QVL9 ASAH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9NR71 ASAH2 "Neutral ceramidase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

RGD\|69410 Asah2 "N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0JL46	NCASE_ORYSJ	3, ., 5, ., 1, ., 2, 3	0.7279	0.9928	0.7057	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1	0.963
3rd Layer	3.5.1.23	0.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT1G07380	ceramidase family protein; ceramidase family protein; FUNCTIONS IN- ceramidase activity; INVOLVED IN- biological_process unknown; LOCATED IN- plasma membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Neutral/alkaline nonlysosomal ceramidase (InterPro-IPR006823); BEST Arabidopsis thaliana protein match is- ceramidase family protein (TAIR-AT2G38010.1); Has 458 Blast hits to 375 proteins in 133 species- Archae - 0; Bacteria - 160; Metazoa - 157; Fungi - 68; Plants - 30; Viruses - 0; Other Eukaryotes - 43 (source- NCBI BLink). (779 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G51290	ceramide kinase-related; ceramide kinase-related; FUNCTIONS IN- diacylglycerol kinase activity; [...] (608 aa)	•	0.899
	SPHK1	SPHK1 (SPHINGOSINE KINASE 1); D-erythro-sphingosine kinase/ diacylglycerol kinase/ sphinganine [...] (1274 aa)	•	0.899
	DES-1-LIKE	DES-1-LIKE; oxidoreductase/ sphingolipid delta-4 desaturase; Encodes a sphingolipid delta4-desa [...] (332 aa)	•	0.899
	AT3G06060	short-chain dehydrogenase/reductase (SDR) family protein; short-chain dehydrogenase/reductase ( [...] (326 aa)	•	0.899
	SBH1	SBH1 (SPHINGOID BASE HYDROXYLASE 1); catalytic/ sphingosine hydroxylase; Encodes one of the two [...] (260 aa)	•	0.899
	SBH2	SBH2 (SPHINGOID BASE HYDROXYLASE 2); catalytic/ sphingosine hydroxylase; Encodes one of the two [...] (259 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		558
pfam04734		672	pfam04734, Ceramidase_alk, Neutral/alkaline non-ly	1e-155
pfam04734		672	pfam04734, Ceramidase_alk, Neutral/alkaline non-ly	1e-129
PTZ00487		715	PTZ00487, PTZ00487, ceramidase; Provisional	1e-106
PTZ00487		715	PTZ00487, PTZ00487, ceramidase; Provisional	7e-78

>gnl\|CDD\|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase	Back alignment and domain information

 Score =  458 bits (1180), Expect = e-155
 Identities = 173/280 (61%), Positives = 206/280 (73%), Gaps = 9/280 (3%)

Query: 278 AEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFE 337
               GFV+AF QSN GDVSPNVLGA+C D   PC FN STCGGK+E C+GRGPG  DEFE
Sbjct: 235 PGAGGFVAAFAQSNVGDVSPNVLGAWCEDGSGPCCFNSSTCGGKSEACHGRGPG-DDEFE 293

Query: 338 STRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAA 397
           STRIIG RQF  A +L++ ASE++ G +D RH Y+D S   VT P   G  ETV+TCPAA
Sbjct: 294 STRIIGRRQFAAAKELYDNASEEVTGPVDSRHQYVDMSNYTVT-PPFTGDGETVRTCPAA 352

Query: 398 MGFAFAAGTTDGPGAFDFTQGDDK--GNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGE 455
           +G++FAAGTTDGPGAFDFTQGD    GNP W  VRDLL  P +EQ  CQ PKPILLDTGE
Sbjct: 353 LGYSFAAGTTDGPGAFDFTQGDTGATGNPLWDAVRDLLAVPTQEQKACQAPKPILLDTGE 412

Query: 456 MKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVV 515
           M  PY W P+I+P+Q+L++GQL I++VPGEFTTMAGRRLR+AV   +   G +    HVV
Sbjct: 413 MTFPYPWVPNIVPVQLLRIGQLAIVAVPGEFTTMAGRRLREAVAAAL---GAAGIKPHVV 469

Query: 516 LAGLTNSYSQYVTTFEEYQVQRYE-VSTWFIPPTCLSNYL 554
           +AGL N+Y+ YVTT EEY +QRYE  ST F P T L+ Y+
Sbjct: 470 IAGLANAYAHYVTTPEEYAIQRYEGASTLFGPHT-LAAYI 508

This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes. Length = 672

>gnl\|CDD\|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase	Back alignment and domain information

>gnl\|CDD\|240437 PTZ00487, PTZ00487, ceramidase; Provisional	Back alignment and domain information

>gnl\|CDD\|240437 PTZ00487, PTZ00487, ceramidase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		558
KOG2232		734	consensus Ceramidases [Signal transduction mechani	100.0
PTZ00487		715	ceramidase; Provisional	100.0
PF04734		674	Ceramidase_alk: Neutral/alkaline non-lysosomal cer	100.0
COG3356		578	Predicted membrane protein [Function unknown]	97.59
PF09843		179	DUF2070: Predicted membrane protein (DUF2070); Int	97.52

>KOG2232 consensus Ceramidases [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=5.4e-141  Score=1102.62  Aligned_cols=511  Identities=74%  Similarity=1.217  Sum_probs=494.3

Q ss_pred             CCcccCCCCccceeecceEEEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCCCCC
Q 008640            1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG   80 (558)
Q Consensus         1 m~GYa~~~~~a~GvhD~L~ARAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHSgP~   80 (558)
                      ||||++..|.+.|||.+|+||||++.+++++|++||++|.+|+++.+..+|.+||+.+||++|..+||.||.||||+||+
T Consensus        50 mMGYan~~QvasGIh~Rl~aRaFIvaep~gnRv~FVs~DagM~sq~lkleVi~RLqarYG~lY~~~NVaiSGtHTHagPg  129 (734)
T KOG2232|consen   50 MMGYANSEQVASGIHFRLRARAFIVAEPQGNRVAFVSLDAGMASQGLKLEVIERLQARYGNLYTEDNVAISGTHTHAGPG  129 (734)
T ss_pred             eccccchhhhhchheeeeeeeeEEEecCCCceEEEEecchhhhhhhhHHHHHHHHHHhhcccccccceeEecccccCCCc
Confidence            89999999999999999999999999988999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhhcccccccchhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhhcCCChhhhccCCCCCCCe
Q 008640           81 GYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKE  160 (558)
Q Consensus        81 g~~~~~~~~~~~~g~d~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NR~~~ay~~nP~~er~~~~g~vD~~  160 (558)
                      ||+++.+|.++..||.++.|+.++++|.++|.+|++||+|++|.+.+|++.++++||++.+|++||++||++|+..+|++
T Consensus       130 Gylqy~~y~vtslGFv~QsF~~mv~Gi~~sI~qAhenlrpG~iflnkg~llda~vNRSPssYL~NPa~ERsky~~d~DKe  209 (734)
T KOG2232|consen  130 GYLQYVLYIVTSLGFVRQSFDVMVDGIEQSIIQAHENLRPGSIFLNKGELLDAGVNRSPSSYLNNPAEERSKYEYDVDKE  209 (734)
T ss_pred             ceeeeeeeeehhcccchHHHHHHHHHHHHHHHHHHhcCCCCeEEecccceecccccCChhHHhcChHhhhhcCccccCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCCeEE---EEEeeeccccccC---CCCcccc---CCcHHHHHHHHHHHhhccCCCCCCcccccccCCCcc
Q 008640          161 MTLLKFVDDQWGPVG---SFNWFATHGTSMS---RTNSLIS---GDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRR  231 (558)
Q Consensus       161 l~vL~f~~~dG~pia---~L~nyA~HpT~l~---~~n~lIS---aD~~G~a~~~lE~~~~~~~~~~~~~~~~~~~~~~~~  231 (558)
                      |++|||.|.++.|+|   +..||++|+++++   +.|+++|   +|+.|+++++||++.                     
T Consensus       210 mtllkfVD~q~~~~Gar~m~dWf~~h~~~~n~~~n~~r~Vss~isd~~~~a~~Lle~~~---------------------  268 (734)
T KOG2232|consen  210 MTLLKFVDLQWGPLGARFMEDWFEVHNGSMNSSRNSPRRVSSIISDNVGYASLLLEKAS---------------------  268 (734)
T ss_pred             eEEEEEEeccCCccchHHHHHHHHhcccccccccCCcceecccccccccHHHHHHHHhh---------------------
Confidence            999999999999999   5999999999998   6678888   888888888888764                     


Q ss_pred             ccccccccccchhHHHHHhhccCCCCCCchhhhhhhhhhhccccccccCCCeEEEeeccccCCCCCCCCCCccccCCCCC
Q 008640          232 VSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPC  311 (558)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaf~~g~~GDvsPn~~g~~~~~~~~~c  311 (558)
                                          ...+-+|+.++..+|++|+||.    ..++.||+||||+|+||||||++|++|.|+|+||
T Consensus       269 --------------------~~~~~pG~~v~~~~~~~~rvr~----~~k~~FVsAFcqsN~GDVSPNilG~~CidtG~~C  324 (734)
T KOG2232|consen  269 --------------------NPNSMPGKSVTRSSSVARRVRN----ADKGKFVSAFCQSNCGDVSPNILGPFCIDTGLPC  324 (734)
T ss_pred             --------------------CcccCCCcccccchhhhhhhhc----ccccchhhhhhhccCCCCCcccccchhhcCCCcc
Confidence                                3457789999999999999995    6789999999999999999999999999999999


Q ss_pred             CCCCCcCCCCCcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhccccccCcceeeEEeeeccceeEeccCCCCCCccc
Q 008640          312 DFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETV  391 (558)
Q Consensus       312 ~~~~~~c~~~~~~~~~~gp~~~~~~e~~~~ig~~~~~~a~~l~~~~~~~l~g~v~~~~~~~~~~~~~v~~~~~~~~~~~~  391 (558)
                      |++||||||+++||+++||+++||||+++|||++|+..|++||++++++++|+|+|+|+||||++++|+++..++..+.+
T Consensus       325 d~~~StC~g~~~~C~~rGPG~pD~FeSTrIiGer~~k~A~eLfnkaSeevqG~v~~~H~~vD~s~l~vt~n~~~~~se~v  404 (734)
T KOG2232|consen  325 DFNHSTCPGGNEMCYGRGPGYPDEFESTRIIGERQFKMALELFNKASEEVQGKVDYRHQYVDFSNLNVTLNKLSGKSEVV  404 (734)
T ss_pred             ccccCcCCCCCcceeccCCCCcchhhhhhHHhHHHHHHHHHHHHhhHHHhcCcccceeEeeccccceeEecCcCCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988889999


Q ss_pred             cccccccccccccccCCCCCCccccCCCCCCCchHHHhhhhcCCCChhhhhccCCcceeecCCCCcCCCCCCCceeeeeE
Q 008640          392 KTCPAAMGFAFAAGTTDGPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQI  471 (558)
Q Consensus       392 ~tc~~a~G~~faag~~dg~g~~~~~~g~~~~~p~w~~~~~~~~~p~~~~~~cq~pk~ill~~G~~~~p~~~~~~~~~vq~  471 (558)
                      ||||||||++|||||+||||.|+|+||++.+||||++++++++.|++|+.+||+||||||+||+|++||+|.|.+|++||
T Consensus       405 ktC~~AmGf~FAAGTtDGpGafdF~QG~~~gnpfW~~VRn~l~~P~~e~i~Ch~PKPILL~TGemt~PydW~P~Iv~~Qi  484 (734)
T KOG2232|consen  405 KTCPAAMGFSFAAGTTDGPGAFDFTQGDDQGNPFWRLVRNVLKTPTEEQIKCHKPKPILLDTGEMTKPYDWAPSIVSVQI  484 (734)
T ss_pred             ccCcccccccccccccCCCCccccccCCcCCChHHHHHHHHHcCCCHHHhcccCCCceEecccccCCCcCCCccccchhe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCEEEEecCCccchHHHHHHHHHHHHHHhhcCCCCCCceEEEEeccCCCcccCCCHhhhccCceee-eeccCCCCCc
Q 008640          472 LQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEV-STWFIPPTCL  550 (558)
Q Consensus       472 ~riG~l~i~~~P~E~tt~~G~rlr~~~~~~~~~~~~~~~~~~v~v~gl~Ngy~gYitT~eeY~~q~YEg-sT~~Gp~~tl  550 (558)
                      ||||+|+|+++|||||||+|||||++|++.+++.+. ..+.+|+|+||+|.|++||+|+||||.||||| ||+||| |||
T Consensus       485 lriGql~I~aVPgEFTTMaGRRLR~avka~~~~~g~-~~~~~VVIaGLtN~YsqYi~T~EEYqvQRYE~ASTlyGp-Htl  562 (734)
T KOG2232|consen  485 LRIGQLVILAVPGEFTTMAGRRLRDAVKAALKSSGN-SINMHVVIAGLTNIYSQYITTFEEYQVQRYEGASTLYGP-HTL  562 (734)
T ss_pred             eeeccEEEEecCccceehhhHHHHHHHHHHHHhcCC-CcceEEEEeccccchhhhcccHHHHhHHHhhccccccCc-chh
Confidence            999999999999999999999999999999998765 25789999999999999999999999999999 999999 999


Q ss_pred             cccccccC
Q 008640          551 SNYLPQLS  558 (558)
Q Consensus       551 ~ay~~~~~  558 (558)
                      .+|||+|+
T Consensus       563 S~Yiq~Fk  570 (734)
T KOG2232|consen  563 SAYIQEFK  570 (734)
T ss_pred             hHHHHHHH
Confidence            99999985

>PTZ00487 ceramidase; Provisional	Back alignment and domain information

>PF04734 Ceramidase_alk: Neutral/alkaline non-lysosomal ceramidase; InterPro: IPR006823 This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes [, , ]	Back alignment and domain information

>COG3356 Predicted membrane protein [Function unknown]	Back alignment and domain information

>PF09843 DUF2070: Predicted membrane protein (DUF2070); InterPro: IPR019204 This domain of unknown function is found in various bacterial and archael hypothetical proteins, as well as in prokaryotic polyketide synthase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		558
2zxc_A		646	Seramidase Complexed With C2 Length = 646		6e-47
2zxc_A		646	Seramidase Complexed With C2 Length = 646		3e-36

>pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646

Back alignment and structure

Iteration: 1

Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 13/232 (5%) Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARY 59 MMGY+++EQ +GIH R AR F++ E G R+V+VN D M Q V +KV+ RLKA+Y Sbjct: 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKY 82 Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119 +Y E NV ++ HTH+GPGG+ Y +Y ++ LGF ++F+A+VDGI +S+ +A L+ Sbjct: 83 PGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQ 142 Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179 PG +F GEL +AS +RS ++L NP + Y+ +D +M++L FVD G+ +W Sbjct: 143 PGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDPQMSVLSFVDANGELAGAISW 200 Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMED----------WFEQSNAGHSSAD 221 F H TSM+ N LIS DNKG A+ E F Q+NAG+ S + Sbjct: 201 FPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPN 252

PyMOL of 2zxc

>pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		558
2zws_A		646	Neutral ceramidase; prism fold and beta-sandwich f	5e-71
2zws_A		646	Neutral ceramidase; prism fold and beta-sandwich f	6e-64
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646	Back alignment and structure

 Score =  238 bits (609), Expect = 5e-71
 Identities = 102/281 (36%), Positives = 151/281 (53%), Gaps = 14/281 (4%)

Query: 1   MMGYANMEQIASGIHFRLRARTFIVAEPQG-NRVVFVNLDACMASQIVKIKVIERLKARY 59
           MMGY+++EQ  +GIH R  AR F++ E     R+V+VN D  M  Q V +KV+ RLKA+Y
Sbjct: 23  MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKY 82

Query: 60  GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
             +Y E NV ++  HTH+GPGG+  Y +Y ++ LGF  ++F+A+VDGI +S+ +A   L+
Sbjct: 83  PGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQ 142

Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
           PG +F   GEL +AS +RS  ++L NP  +   Y+  +D +M++L FVD      G+ +W
Sbjct: 143 PGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDPQMSVLSFVDANGELAGAISW 200

Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDW----------FEQSNAGHSSADELVSEGIP 229
           F  H TSM+  N LIS DNKG A+   E            F Q+NAG+ S +  +  G  
Sbjct: 201 FPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPNLNLKPG-S 259

Query: 230 RRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARR 270
               +   + R         A        +     L    R
Sbjct: 260 GPFDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFR 300

PyMOL of 2zws

>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		558
2zws_A		646	Neutral ceramidase; prism fold and beta-sandwich f	100.0

>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*	Back alignment and structure

Probab=100.00  E-value=2.7e-106  Score=903.73  Aligned_cols=453  Identities=43%  Similarity=0.751  Sum_probs=414.6

Q ss_pred             CCcccCCCCccceeecceEEEEEEEEcCC-CCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCCCC
Q 008640            1 MMGYANMEQIASGIHFRLRARTFIVAEPQ-GNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP   79 (558)
Q Consensus         1 m~GYa~~~~~a~GvhD~L~ARAlvl~~g~-~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHSgP   79 (558)
                      ||||+.+.|+++|||||||||||||++++ ++|++||++|+++++..++++|+++|++++|++|+.+||+|++|||||||
T Consensus        23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP  102 (646)
T 2zws_A           23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP  102 (646)
T ss_dssp             EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred             ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence            79999999999999999999999999863 79999999999999999999999999999998899999999999999999


Q ss_pred             CCCccchhhcccccccchhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhhcCCChhhhccCCCCCCC
Q 008640           80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK  159 (558)
Q Consensus        80 ~g~~~~~~~~~~~~g~d~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NR~~~ay~~nP~~er~~~~g~vD~  159 (558)
                      ++|+++.+++++..+|+++|+++|+++|++||++|+++|+|++|.|+++++.++++|||+.+|++||  ||.+|++++||
T Consensus       103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~  180 (646)
T 2zws_A          103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP  180 (646)
T ss_dssp             CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred             cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999  89999999999


Q ss_pred             eeEEEEEEeCCCCeEEEEEeeeccccccCCCCccccCCcHHHHHHHHHHHhhccCCCCCCcccccccCCCcccccccccc
Q 008640          160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF  239 (558)
Q Consensus       160 ~l~vL~f~~~dG~pia~L~nyA~HpT~l~~~n~lISaD~~G~a~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (558)
                      +|+||+|++.+|+++|+|+|||||||+|+++|++||+||+|++++.||+.+++                           
T Consensus       181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~---------------------------  233 (646)
T 2zws_A          181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR---------------------------  233 (646)
T ss_dssp             EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC---------------------------
T ss_pred             ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC---------------------------
Confidence            99999999999999999999999999999999999999999999999997532                           


Q ss_pred             ccchhHHHHHhhccCCCCCCchhhhhhhhhhhccccccccCCCeEEEeeccccCCCCCCCCCCccccCCCCCCCCCCcCC
Q 008640          240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG  319 (558)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaf~~g~~GDvsPn~~g~~~~~~~~~c~~~~~~c~  319 (558)
                                                              +++||++|+|||+||+|||+.                   
T Consensus       234 ----------------------------------------~~~fva~F~qg~~GDvsP~~~-------------------  254 (646)
T 2zws_A          234 ----------------------------------------KSGFVAAFAQTNAGNLSPNLN-------------------  254 (646)
T ss_dssp             ----------------------------------------STTCEEEEECSSCTTEEECCC-------------------
T ss_pred             ----------------------------------------CCCeEEEEeccCcccCCcccc-------------------
Confidence                                                    357999999999999999975                   


Q ss_pred             CCCcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhccccccCcceeeEEeeeccceeEeccCCCCCCccccccccccc
Q 008640          320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG  399 (558)
Q Consensus       320 ~~~~~~~~~gp~~~~~~e~~~~ig~~~~~~a~~l~~~~~~~l~g~v~~~~~~~~~~~~~v~~~~~~~~~~~~~tc~~a~G  399 (558)
                          .|+++||++ ++++++++||++|+++|+++|++..++++|+|+++|+|+||+++++.++.+  +++..+||+++||
T Consensus       255 ----~~~~~Gp~~-~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~--~g~~~~tc~~a~g  327 (646)
T 2zws_A          255 ----LKPGSGPFD-NEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFT--DGQPRQLCTAAIG  327 (646)
T ss_dssp             ----CCTTCCTTS-CHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGS--SSSCEECCCCCEE
T ss_pred             ----ccccCCCCc-ccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccC--Ccccceechhhhc
Confidence                356789987 999999999999999999999887788999999999999999999988755  3368899999999


Q ss_pred             ccccccc-CCCCCCccccCCCCCCCchHHHhhhhcCCC-ChhhhhccCCcceeecCCCCcCCCCCCCceeeeeEEEEcCE
Q 008640          400 FAFAAGT-TDGPGAFDFTQGDDKGNPFWRLVRDLLKKP-DKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQL  477 (558)
Q Consensus       400 ~~faag~-~dg~g~~~~~~g~~~~~p~w~~~~~~~~~p-~~~~~~cq~pk~ill~~G~~~~p~~~~~~~~~vq~~riG~l  477 (558)
                      ++|+||+ +||||.++|+|+ +  +|+|+.+++++.+| ++++.+||+||+||+++|+ ++|++|.+.+++||+||||++
T Consensus       328 ~s~aag~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqilriGdl  403 (646)
T 2zws_A          328 TSLAAGSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQMFRIGQL  403 (646)
T ss_dssp             C---------------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEEEEETTE
T ss_pred             hhhhcCCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEEEEECCE
Confidence            9999999 999999999999 4  99999999988888 7999999999999999998 899999999999999999999


Q ss_pred             EEEecCCccchHHHHHHHHHHHHHHhhcCCCCCCceEEEEeccCCCcccCCCHhhhccCceee-eeccCCCCCccccccc
Q 008640          478 VILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEV-STWFIPPTCLSNYLPQ  556 (558)
Q Consensus       478 ~i~~~P~E~tt~~G~rlr~~~~~~~~~~~~~~~~~~v~v~gl~Ngy~gYitT~eeY~~q~YEg-sT~~Gp~~tl~ay~~~  556 (558)
                      +|+++|||+|+|+|+|||+++++.+.+. +   .++|+|+||+|+|+|||||+|||+.|+||+ ||+||| +|+++|+|+
T Consensus       404 ~iv~~PgE~tt~~G~rlr~~~~~~~~~~-~---~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~sT~~gp-~tl~~~i~~  478 (646)
T 2zws_A          404 ELLGAPAEFTVMAGVRIRRAVQAASEAA-G---IRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGP-WTQAAYQQL  478 (646)
T ss_dssp             EEEECSSEECHHHHHHHHHHHHHHHGGG-T---CCEEEEECSBSSCCCEECCHHHHHHCCTTTTSCTTCT-THHHHHHHH
T ss_pred             EEEecCcHHHHHHHHHHHHHHHhhhccC-C---CceEEEEecCCCCCCccCCHHHHhcCCccceeeecCC-ChHHHHHHH
Confidence            9999999999999999999999887653 3   379999999999999999999999999999 999999 999999998


Q ss_pred             c
Q 008640          557 L  557 (558)
Q Consensus       557 ~  557 (558)
                      +
T Consensus       479 ~  479 (646)
T 2zws_A          479 F  479 (646)
T ss_dssp             H
T ss_pred             H
Confidence            6

PyMOL of 2zws

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00