Citrus Sinensis ID: 009030

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540------
Protein Sequence
MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYLQL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHcccccccccccccHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHccccHEEEEHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHEEEccHccEEEEEcccccccEEEEEc
Coil and Loop (DISEMBL)
mmdpiptappprsatdlfsdpadshplwfksnlflspnfdsesyISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKelpslpadgsdfdvnleerksmssattfqpvengtnvrETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLmqkiiphgpsealagasgdelESDYEQIKQCVEKDCKFLLDISsaensglhvFDFLANSILKEVLSAIqkgkpgafspgrptqFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAaslapvqnsnsnqgnsqALTLKQSVTLLDSMkscwrqdvfllpcsdKFLRLSLQLLSRYSNWLSSGLaarssghasfnpgnewaisaapddfiyvrlapcpisriylql
Flexible Loop (DISEMBL)
mmdpiptappprsATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLStklvdvdaaVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLikelpslpadgsDFDVNLEERKSmssattfqpvengtnvrETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQkgkpgafspgrpTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAASLAPVQnsnsnqgnsQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYLQL
Low Complexity Region (SEG)
MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLvdvdaavvRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIagaldsaltaaslaPVqnsnsnqgnsqALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFlrlslqllsrYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYLQL
Disordered region (IsUnstruct)
*************************PLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGL*******SAREVLELLLDTFHVVSKVEKLIKE******************************************LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPH*****************YEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGK***F****PTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTA********************LKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAARS*GHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYL**
Disordered Region (DISOPRED)
*************************PLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIK*******************************************LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKI******************SDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTA*****************ALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLS**********************AAPDDFIYVRLAPCPISRIYLQL
Disordered Region (DISEMBL)
***************DLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQN********ASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAASLAPV*********SQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYLQL
Disordered Region (DISPRO)
****************LFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELP*********************************VRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAA***************QALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAAR*********GNEWAISAAPDDFIYVRLAPCPISRIYLQL
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLxxxxxxxxxxxxxxxxxxxxxDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRLAPCPISRIYLQL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	546	2.2.26 [Sep-21-2011]
Q14746	738	Conserved oligomeric Golg	yes	no	0.807	0.597	0.302	2e-62
Q921L5	731	Conserved oligomeric Golg	yes	no	0.816	0.610	0.288	4e-61
Q9VF78	710	Conserved oligomeric Golg	yes	no	0.831	0.639	0.265	8e-36
Q54UC2	904	Conserved oligomeric Golg	yes	no	0.560	0.338	0.217	3e-11
Q21444	681	Conserved oligomeric Golg	yes	no	0.252	0.202	0.272	9e-06

>sp|Q14746|COG2_HUMAN Conserved oligomeric Golgi complex subunit 2 OS=Homo sapiens GN=COG2 PE=1 SV=1

 Score =  240 bits (613), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 252/483 (52%), Gaps = 42/483 (8%)

Query: 21  PADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDY 80
           P     L F  + F+  +FD + ++S+ R  V  E LR +L+ +   L   +++LIN+DY
Sbjct: 9   PKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDY 68

Query: 81  ADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASARE 140
           ADFVNLST LV +D A+ ++  PL +LRE++   R ++   + A+   + ++ +    + 
Sbjct: 69  ADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKM 128

Query: 141 VLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRET 200
            +  L+     V K+EK++               N +  K  S+     P+  G      
Sbjct: 129 CVLRLIQVIRSVEKIEKIL---------------NSQSSKETSALEASSPLLTG------ 167

Query: 201 QSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNAN 260
              +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  + +
Sbjct: 168 --QILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225

Query: 261 VIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQ 320
           +I +CLR YA ID TR+AE +    +V P + ++I     E    +  + L+  Y ++ +
Sbjct: 226 IIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVI----IEQFVESHPNGLQVMYNKLLE 281

Query: 321 CVEKDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFL 375
            V   C+ L +     ISS + + +  +DFL NS+  +++  +++  P  F+PG P  F 
Sbjct: 282 FVPHHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFH 341

Query: 376 RNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSAL 435
             Y  S+DF+  LE  C S+++V + RA   Y  F K+WN+ VYF +RF+EIAG+L++AL
Sbjct: 342 EKYTISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAAL 401

Query: 436 T-AASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLS 494
           T     AP ++            L  S     S++ CW  ++FL     +  RL+LQ+L+
Sbjct: 402 TDVLEDAPAES---------PYCLLASHRTWSSLRRCWSDEMFLPLLVHRLWRLTLQILA 452

Query: 495 RYS 497
           RYS
Sbjct: 453 RYS 455

Required for normal Golgi morphology and function.
Homo sapiens (taxid: 9606)

>sp|Q921L5|COG2_MOUSE Conserved oligomeric Golgi complex subunit 2 OS=Mus musculus GN=Cog2 PE=2 SV=2

 Score =  236 bits (601), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 255/486 (52%), Gaps = 40/486 (8%)

Query: 21  PADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDY 80
           P     L F  + F+  +FD + ++S+ R  V  E LR +L+ +   L   +++LIN+DY
Sbjct: 9   PTGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDY 68

Query: 81  ADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASARE 140
           ADFVNLST LV +D A+ ++  PL +LRE++   R ++   ++A+   + ++ +    + 
Sbjct: 69  ADFVNLSTNLVGMDRALNQLSVPLGQLREEVLSLRSSVSEGILAVDERMSKQEDIRKKKM 128

Query: 141 VLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRET 200
            +  L+     V K+EK++               N +  K +SS     P+  G      
Sbjct: 129 SVLRLIQVIRSVEKIEKIL---------------NSQSSKDVSSQEASSPLLTG------ 167

Query: 201 QSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNAN 260
              +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  + +
Sbjct: 168 --QVLERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225

Query: 261 VIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQ 320
           ++ +CLR YA ID T++AE +    +V P + ++I     E    +    L+  Y ++ +
Sbjct: 226 IVRHCLRTYATIDKTQDAEALVGQVLVKPYVNEVI----VEQFVESHPSSLQLMYNKLLE 281

Query: 321 CVEKDCKFLLDI-----SSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFL 375
            V   C+ L ++     SS + + +  +DFL NS+  E++  +++  P  F+PG P  F 
Sbjct: 282 FVPHHCRLLREVTGGAVSSEKGTIVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGDPDAFH 341

Query: 376 RNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIAGALDSAL 435
           + Y  S+DF+   E  C S+++V + RA   Y  F  +WN+ VYF +RF+E+AG+L++AL
Sbjct: 342 QKYTVSMDFVQRFERQCGSQASVKRLRAHPAYHNFSNKWNLPVYFQIRFREVAGSLEAAL 401

Query: 436 TAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLRLSLQLLSR 495
           T          ++  G+   L       +  S+  CW  ++FL   + +  RL+LQ+L+R
Sbjct: 402 TDGL------EDAPAGSPYCLLASHRTWI--SLGKCWSDEMFLPLLAHRLWRLTLQILAR 453

Query: 496 YSNWLS 501
           +S ++S
Sbjct: 454 FSVFVS 459

Required for normal Golgi morphology and function.

Mus musculus (taxid: 10090)

>sp|Q9VF78|COG2_DROME Conserved oligomeric Golgi complex subunit 2 OS=Drosophila melanogaster GN=ldlCp PE=2 SV=1

 Score =  152 bits (383), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 220/505 (43%), Gaps = 51/505 (10%)

Query: 9   PPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSL 68
           P  +SA       + +  L F  N F+  NF  + ++ + R     E LR  L  +L  L
Sbjct: 4   PVKKSAHLTAGSTSTAEKLCFDKNEFMKANFSVDEFLHKNRNAPSLEQLRDNLGLYLKGL 63

Query: 69  NHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNG 128
              +IDLIN DYADFVNLS  LV +D  +  ++ PL + R  I+   G ++ ++  L+  
Sbjct: 64  RAAMIDLINEDYADFVNLSANLVGLDQNIKTIQQPLEQFRSDIESIHGLIDENVTELRAQ 123

Query: 129 LKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTF 188
           L+++ +    +  L+ L   +  ++K++ LI                  +RK        
Sbjct: 124 LEEKRQLREFKRGLQSLKKVYETINKLQDLI------------------DRKLSGE---- 161

Query: 189 QPVENGTNVRETQSMLLERIASEMNRLKFYIAHA-QNLPFIENMEKRIKSASLLLDASLG 247
           QP+         +++ LER A ++ +LKF+  H  ++L    + + +I+     L   L 
Sbjct: 162 QPI---------KAVDLERAALDLIQLKFHEKHCFKHLS--PDHQGKIQQLEEQLHQHLR 210

Query: 248 HCFVHGLEHQNANV---IYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALA 304
             F   L     +    +  CLR Y  ++    AE  F   VVAP M  +I  G  +   
Sbjct: 211 RFFNDALSQARNSAPESLERCLRIYITLNACDQAECAFREDVVAPYMTGVI--GEQQLQN 268

Query: 305 GASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPG 364
              G  L   Y +I   +      LL ++   +     F+F+ NS   +V + ++     
Sbjct: 269 SPQG--LAGIYSKILNFISLHMTDLLRLTLYSDK-FPGFNFVVNSYWSDVETRLELHMNS 325

Query: 365 AFSPGRPTQFLRNYKSSLDFLAYLEGY--CPSRSAVAKFRAEAIYVEFMKQWNVGVYFSL 422
            F+PG    F   YK + DFL  +E    C    AV  +R       F  +WN+ VYF +
Sbjct: 326 IFAPGNSEVFYVKYKCTRDFLGKIEELLTCSGEQAVTFYRQHKQTKSFEARWNLPVYFQI 385

Query: 423 RFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSV--TLLDSMKSCWRQDVFLLP 480
            FQEIAG  +     A L PV   +S + N      K S      ++M  CW + V+L  
Sbjct: 386 CFQEIAGKFE-----AQLEPVLQEDSLKDNLTDSDYKISAFNAAKEAMTRCWAEGVYLPE 440

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLA 505
              KF +L++Q++ R S W++  + 
Sbjct: 441 VFPKFYKLNVQVVLRLSRWITDAIT 465

Required for normal Golgi morphology and function.

Drosophila melanogaster (taxid: 7227)

>sp|Q54UC2|COG2_DICDI Conserved oligomeric Golgi complex subunit 2 OS=Dictyostelium discoideum GN=cog2 PE=3 SV=1

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 147/341 (43%), Gaps = 35/341 (10%)

Query: 26  PLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVN 85
           PL F  ++F S  F+ + +IS+ R  V  E+++ +L+ +   L+ ELI+LIN++Y  F +
Sbjct: 52  PLCFSKDVFTSNTFEVDQFISDCRKRVNLESVQKDLREYSKHLDSELIELINKEYQSFFS 111

Query: 86  LSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELL 145
           LST LV  D  +         ++ +I  F   +      +++ L ++      +++L+L 
Sbjct: 112 LSTSLVGFDTILNEFSISQSSIKSEIKSFNNEIVKVRGLVEDKLNEKKSIEQKKKLLQLY 171

Query: 146 LDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLL 205
           +     ++ +  L  +L  L    +DF      +K  ++       E   N  +   +L+
Sbjct: 172 ISISETLNNMNHLFDQLYQL-THPNDF------KKINNNNNNHTNNETNINDGDVLELLI 224

Query: 206 ERIASEM------------NRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVH- 252
           +RI++              + LKF I  + +L  ++   K  +    +   SL   F++ 
Sbjct: 225 DRISNSFYQIQNQMSSLTNDELKFNIFQSLSLKIMDLSNKIEEKVEPIFKESLKR-FINV 283

Query: 253 ----------GLEHQNA---NVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGP 299
                       E QN     ++  CL+ +  ID      ++F   +V P + +I+    
Sbjct: 284 NNNNKEIVDDNNEKQNKYDERILLVCLKTFQTIDKLNVPYKLFKTLIVKPRLAQIVSLRN 343

Query: 300 SEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGL 340
            E +  ++ D L   Y  I + ++  C    DIS+  N+ L
Sbjct: 344 LE-INKSTTDGLSQIYNSIIEFLKNQCSSFFDISNLINNNL 383

Required for normal Golgi function.

Dictyostelium discoideum (taxid: 44689)

>sp|Q21444|COG2_CAEEL Conserved oligomeric Golgi complex subunit 2 OS=Caenorhabditis elegans GN=cogc-2 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 9/147 (6%)

Query: 17  LFSDP----ADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHEL 72
           +F+ P     D   L F    F   +F+ E +++  R     +T++ +L+ +L S+ + +
Sbjct: 10  MFASPNTFYIDESKLCFNKTHFNREDFNVERFMNLARQKSDLKTIQQDLRLYLKSVQNSM 69

Query: 73  IDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQR 132
           I+LIN DYADFV+LS+ LV +  ++ ++   +  +    D F+ +   S V +   ++Q+
Sbjct: 70  IELINDDYADFVHLSSNLVSLQDSLNKIEQDINRI---WDEFKESTRES-VGMAERIEQK 125

Query: 133 -SEAASAREVLELLLDTFHVVSKVEKL 158
             E  S RE    + D  + +  +EKL
Sbjct: 126 CDELCSNREKQIEIRDRIYFLVAIEKL 152

Required for normal Golgi morphology and function.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	546
255540279	756	Conserved oligomeric Golgi complex compo	0.972	0.702	0.819	0.0
224121966	755	predicted protein [Populus trichocarpa]	0.965	0.698	0.802	0.0
224136109	757	predicted protein [Populus trichocarpa]	0.965	0.696	0.801	0.0
356563194	755	PREDICTED: conserved oligomeric Golgi co	0.970	0.701	0.770	0.0
449441234	754	PREDICTED: conserved oligomeric Golgi co	0.968	0.701	0.765	0.0
356514011	755	PREDICTED: conserved oligomeric Golgi co	0.970	0.701	0.759	0.0
147767731	777	hypothetical protein VITISV_007347 [Viti	0.963	0.676	0.761	0.0
225456291	751	PREDICTED: conserved oligomeric Golgi co	0.963	0.700	0.761	0.0
357477117	754	Conserved oligomeric Golgi complex subun	0.970	0.702	0.770	0.0
357477119	636	Conserved oligomeric Golgi complex subun	0.970	0.833	0.770	0.0

>gi|255540279|ref|XP_002511204.1| Conserved oligomeric Golgi complex component, putative [Ricinus communis] gi|223550319|gb|EEF51806.1| Conserved oligomeric Golgi complex component, putative [Ricinus communis]

 Score =  907 bits (2343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/532 (81%), Positives = 481/532 (90%), Gaps = 1/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M+D + ++P PRSATDLFSDP DSHPLWFK NLFLSP FDSESYISELRTFVPF+TLRSE
Sbjct: 1   MVDSL-SSPAPRSATDLFSDPLDSHPLWFKPNLFLSPTFDSESYISELRTFVPFDTLRSE 59

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKI+GFRG++EG
Sbjct: 60  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIEGFRGSVEG 119

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SLVAL+NGL+QRSEAASARE+LELLLDTFHVVSKVEKLIKELPSLPAD S+ DVN   + 
Sbjct: 120 SLVALRNGLQQRSEAASAREILELLLDTFHVVSKVEKLIKELPSLPADWSNGDVNSTVKN 179

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
           +MS+  + Q +ENGTN+RETQSMLLERIASEMNRLKFY+AH+QNLPFIENMEKRI+SASL
Sbjct: 180 AMSNGISLQSIENGTNLRETQSMLLERIASEMNRLKFYMAHSQNLPFIENMEKRIQSASL 239

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           LLDASLGHCFV GLEH++ N IYNCLRAYAAIDNT +AEEIF  T+VAPL+ KIIPHGPS
Sbjct: 240 LLDASLGHCFVDGLEHRDENAIYNCLRAYAAIDNTNSAEEIFRTTIVAPLIHKIIPHGPS 299

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
             +AG SGD LE+DY QIKQC+EKDCKFLL+ISSAENSGLH FDFLANSILKEVLSAIQK
Sbjct: 300 GTVAGVSGDGLENDYYQIKQCIEKDCKFLLEISSAENSGLHAFDFLANSILKEVLSAIQK 359

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPGAFSPGRPT+FL NYKSSLDFLA+LEGYCPSRSAVAKFR E +YVEFMKQWNVGVYF
Sbjct: 360 GKPGAFSPGRPTEFLMNYKSSLDFLAHLEGYCPSRSAVAKFRTEVVYVEFMKQWNVGVYF 419

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLRFQEIAGALDSAL+A SL PV+N +S Q N Q LTLKQS TLL+S+KSCWR+DV +L 
Sbjct: 420 SLRFQEIAGALDSALSATSLVPVENLHSGQTNLQDLTLKQSATLLESLKSCWREDVLILS 479

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSDKFLRLSLQLL+RYSNWLSSG+AAR  G+   N   EWAISA PDDF+Y+
Sbjct: 480 CSDKFLRLSLQLLARYSNWLSSGIAARKMGNLGSNTVYEWAISAVPDDFVYI 531

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121966|ref|XP_002318717.1| predicted protein [Populus trichocarpa] gi|222859390|gb|EEE96937.1| predicted protein [Populus trichocarpa]

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/531 (80%), Positives = 473/531 (89%), Gaps = 4/531 (0%)

Query: 2   MDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSEL 61
           +DPI   PPPRSATD FSDP D HPLWFK +LFLSPNFDS+SYISELRTFVPF+TLRSEL
Sbjct: 3   VDPIQILPPPRSATDFFSDPLDFHPLWFKPDLFLSPNFDSDSYISELRTFVPFDTLRSEL 62

Query: 62  QAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGS 121
           QAHL+SLNHELIDLINRDYADFVNLSTKLVDVD+AVVRMRAPLLELREKI+GFRG++E S
Sbjct: 63  QAHLTSLNHELIDLINRDYADFVNLSTKLVDVDSAVVRMRAPLLELREKIEGFRGSVESS 122

Query: 122 LVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKS 181
           LVAL+NGL+QRSEA + REVLELLLDTFHVVSKVEKLIKELPS+PAD S+ DVNL E+ +
Sbjct: 123 LVALKNGLEQRSEATATREVLELLLDTFHVVSKVEKLIKELPSVPADWSNGDVNLTEKNA 182

Query: 182 MSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLL 241
            S+ +    +ENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFI+NMEKRI+ ASLL
Sbjct: 183 ASNGS----IENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIQNMEKRIQGASLL 238

Query: 242 LDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSE 301
           LDASLGHCFV GLEH++ N IYNCLRAYAAIDNT +AEEIF  T+VAPL+QKIIPHGPS 
Sbjct: 239 LDASLGHCFVDGLEHRDENAIYNCLRAYAAIDNTSSAEEIFRTTIVAPLIQKIIPHGPSG 298

Query: 302 ALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKG 361
            + GASGD LE DY++IK+C EKDCKFLL+ISSAENSGLHVFDFLANSILKEVLSAI+KG
Sbjct: 299 GVVGASGDGLEIDYQEIKKCTEKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIKKG 358

Query: 362 KPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFS 421
           KPGAFSPGRPT+FL NYKSSLDFL +LEGYCPSRSAV KFRAEAIYVEFMKQWNVGVYFS
Sbjct: 359 KPGAFSPGRPTEFLINYKSSLDFLGHLEGYCPSRSAVTKFRAEAIYVEFMKQWNVGVYFS 418

Query: 422 LRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPC 481
           LRFQEIAGALDSAL   SL PV  S S  G+SQ LTLKQSVTLL+S++SCWR+DV +  C
Sbjct: 419 LRFQEIAGALDSALATTSLIPVHYSPSGNGSSQDLTLKQSVTLLESLRSCWREDVLIHSC 478

Query: 482 SDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           SDKFLRL+LQLLSR+SNWL SGLAAR +G+   N G EWA SA P+DF+Y+
Sbjct: 479 SDKFLRLTLQLLSRFSNWLLSGLAARKTGNTGSNSGYEWAASAVPNDFLYI 529

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136109|ref|XP_002322242.1| predicted protein [Populus trichocarpa] gi|222869238|gb|EEF06369.1| predicted protein [Populus trichocarpa]

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/533 (80%), Positives = 476/533 (89%), Gaps = 6/533 (1%)

Query: 2   MDPIPTAPPP--RSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRS 59
           +DPI T PPP  RS   LFSDP DSHPLWFK +LFLSPNFDS+SYISELRTFVPF+TLRS
Sbjct: 3   VDPIQTPPPPPPRSNAYLFSDPLDSHPLWFKPDLFLSPNFDSDSYISELRTFVPFDTLRS 62

Query: 60  ELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALE 119
           ELQAHL+SLNHELIDLINRDYADFVNLSTKLVDVD+AVVRMRAPLLELREKI+GFRG++E
Sbjct: 63  ELQAHLTSLNHELIDLINRDYADFVNLSTKLVDVDSAVVRMRAPLLELREKIEGFRGSVE 122

Query: 120 GSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEER 179
            SLVAL+NGL+QRSEAA+ REVLELLLDTFHVVSKVEKLIKELPS+PAD S+ DVNL E+
Sbjct: 123 SSLVALKNGLEQRSEAAATREVLELLLDTFHVVSKVEKLIKELPSVPADWSNGDVNLAEK 182

Query: 180 KSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSAS 239
             +S+ +    +EN TNVRETQSMLLERIASEMNRLKFYIAHAQNLPFI+NMEKRI+SAS
Sbjct: 183 NVVSNGS----IENVTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIQNMEKRIQSAS 238

Query: 240 LLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGP 299
           LLLDASLGHCFV GLEH++ +VIYNCLRAYAAIDNT +AEEIF  TVVAPL+QKIIPHGP
Sbjct: 239 LLLDASLGHCFVDGLEHRDESVIYNCLRAYAAIDNTSSAEEIFRTTVVAPLVQKIIPHGP 298

Query: 300 SEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQ 359
           S    GASGD LE+DY++IK C+ KDCKFLL+ISSAENSGLHVFDFLANSILKEVLSAIQ
Sbjct: 299 SGVAVGASGDGLENDYQEIKTCINKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQ 358

Query: 360 KGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVY 419
           KGKPGAFSPGRPT+FL NYKSSLDFLA+LEGYCPSRS+V KFRAEAIY EFMKQWNVGVY
Sbjct: 359 KGKPGAFSPGRPTEFLINYKSSLDFLAHLEGYCPSRSSVTKFRAEAIYNEFMKQWNVGVY 418

Query: 420 FSLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLL 479
           FSLRFQEIAGAL+SAL A SL PV NS+S   NSQ LTLKQS+TLL+S++SCWR+DV + 
Sbjct: 419 FSLRFQEIAGALESALAATSLIPVHNSHSGHWNSQDLTLKQSITLLESLRSCWREDVLIF 478

Query: 480 PCSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
            C+DKFLRL+LQLLSR+SNWLSSGL AR +G+ S N G EWA SA P DF+Y+
Sbjct: 479 SCADKFLRLTLQLLSRFSNWLSSGLDARKTGNTSSNSGYEWAASAVPSDFLYI 531

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563194|ref|XP_003549849.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like [Glycine max]

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/532 (77%), Positives = 473/532 (88%), Gaps = 2/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M DPIP   PPRSATDLFSDP D+HPLWFK   FLSP+FDSESYISELRTFVPF+TLRSE
Sbjct: 1   MADPIPA--PPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSE 58

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           L ++LSSLNHELIDLINRDYADFVNLSTKLVDVDA VVRMRAPL+ELR+KI+ FRG++E 
Sbjct: 59  LNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELRDKIEQFRGSVEV 118

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SLVA++N L+QRSE ASARE LELLLD FHVVSKVEKLIKELPS+P D S+ DVNL ER 
Sbjct: 119 SLVAIKNRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERN 178

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
           ++S+  + Q VEN   +RETQSMLLERIASEMNRLKFY+ HA+NLPFIENMEKRI++AS+
Sbjct: 179 NLSNGVSAQHVENEMIIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASV 238

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
            +DASLGHCFV+GLEH++A  I+NCLRAYAAIDNT++AEEIF  TVVAPL+QKIIPHG S
Sbjct: 239 TVDASLGHCFVNGLEHRDATAIFNCLRAYAAIDNTKSAEEIFRVTVVAPLIQKIIPHGSS 298

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
             +AG+ GD LE+DY+ IK+ ++KDCKFLL+ISSAENSGLHVFDFLANSILKEVLSAIQK
Sbjct: 299 AVVAGSFGDGLENDYQLIKEFIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQK 358

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPGAFSPGRPT+FL+NYKSSLDFLA+LEGYCPSRSAVAKFR+EAIY EFMKQWN+GVYF
Sbjct: 359 GKPGAFSPGRPTEFLKNYKSSLDFLAFLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYF 418

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLRFQEIAG+LDS LT +SL PVQNS++ + N Q LTLKQSVTLL+S++SCWR+DV +L 
Sbjct: 419 SLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLS 478

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSD+FLRLSLQLLSRYS+WLSSGL AR + + S +PG EWA+SA  DDFI+V
Sbjct: 479 CSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFV 530

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441234|ref|XP_004138387.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like [Cucumis sativus]

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/532 (76%), Positives = 465/532 (87%), Gaps = 3/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M D IP  PP RSA DLFSDP DSHPLWFK +LFLSPNFDSESYISELRTFVPF+TLRS+
Sbjct: 1   MADLIP--PPHRSANDLFSDPLDSHPLWFKPDLFLSPNFDSESYISELRTFVPFDTLRSQ 58

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           L +HLS+LN ELIDLINRDY DFVNLSTKLVDV+AAVVRMRAPL+ELREKI+ FRG++E 
Sbjct: 59  LHSHLSALNRELIDLINRDYTDFVNLSTKLVDVEAAVVRMRAPLVELREKIEQFRGSVEF 118

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SL ALQNGL+QRSEAASAREVLELLLDTFHVVSKVEKLIKELPS PADGS+  +NL ++ 
Sbjct: 119 SLSALQNGLRQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSAPADGSNGTMNLTDKS 178

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
            +S+  +   +ENGTN+RETQSMLLERI+SEMNRLKFYIAHAQNLPFI+NM+KRI+SASL
Sbjct: 179 GLSNGASLPHIENGTNLRETQSMLLERISSEMNRLKFYIAHAQNLPFIQNMDKRIQSASL 238

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           LLD SLGHCFV GL H + N IYNCLRAYAAIDNT +AEEIF +TVV+P + K+IPH  S
Sbjct: 239 LLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRSTVVSPAIHKVIPHKVS 298

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
               G+S D+LE+DY+Q+KQ ++KDCKFLL+IS+ ENSGLHVFDFLANSILKEVLSAIQK
Sbjct: 299 GMDTGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQK 358

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
            KPGAFSPGRPT+FL+NYKSSLDFLAYLEGYCPSRSAVAKFRA ++Y EFMKQWN+GVYF
Sbjct: 359 SKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYF 418

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLR QEIAGALDS+L+A  L PVQ S+S +GN+Q LTLKQSV LLD + +CWR DV +L 
Sbjct: 419 SLRLQEIAGALDSSLSAPILTPVQTSSSGRGNNQDLTLKQSVMLLDCLTACWRDDVLVLS 478

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSDKFLRLSLQLLSRY+NWLSSGLAAR +G  S +PG+EWA+ A PDD IY+
Sbjct: 479 CSDKFLRLSLQLLSRYTNWLSSGLAARKTGTGS-HPGSEWAVGATPDDLIYI 529

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514011|ref|XP_003525701.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like [Glycine max]

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/532 (75%), Positives = 472/532 (88%), Gaps = 2/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M DPIP   PPRSAT+LFSDP D+HPLWFK   FLSP+FDSESYISELRTFVPF+TLRSE
Sbjct: 1   MADPIPA--PPRSATELFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSE 58

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           L ++LSSLNHELIDLINRDYADFVNLSTKLVDVDA VVRMRAPL+ELR+KI+ FRG++E 
Sbjct: 59  LNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELRDKIEQFRGSVEV 118

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SLVA+++ L+QRSE ASARE LELLLD FHVVSKVEKLIKELPS+P D S+ DVNL ER 
Sbjct: 119 SLVAIKSRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERN 178

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
           + S+  + Q VEN  ++RETQSMLLERIASEMNRLK+Y+ HA+NLPFIENME+RI++ASL
Sbjct: 179 NFSNGVSVQHVENEMSIRETQSMLLERIASEMNRLKYYVTHAKNLPFIENMEERIQNASL 238

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
            + ASLGHCFV+GLE+++A  I+NCLRAYAAIDNT+NAEEIF  TVVAPL+Q+IIPHG S
Sbjct: 239 TVYASLGHCFVNGLENRDATAIFNCLRAYAAIDNTKNAEEIFRATVVAPLVQRIIPHGSS 298

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
             +AG+SGD LE+DY+ IK+C++KDCKFLL+ISSAENSGLHVFDFLANSILKEVLSAIQK
Sbjct: 299 AVVAGSSGDGLENDYQLIKECIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQK 358

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPGAFSPGRPT+FL+NYKSSLDFLAYLEGYCPSR +VAKFR+EAIY EFMK+WN+GVYF
Sbjct: 359 GKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRLSVAKFRSEAIYTEFMKRWNIGVYF 418

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLRFQEIAG+LDS LT +SL PV NS++ + N Q LTLKQSVTLL+S++SCWR+DV +L 
Sbjct: 419 SLRFQEIAGSLDSVLTTSSLVPVLNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLS 478

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSD+FLRLSLQLLSRYS+WLSSGL AR + + S +PG EWA+SA  DDFI+V
Sbjct: 479 CSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFV 530

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767731|emb|CAN71854.1| hypothetical protein VITISV_007347 [Vitis vinifera]

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/532 (76%), Positives = 464/532 (87%), Gaps = 6/532 (1%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M D +PT    RSATDLFSDP DS PLWFK + FL P FDSE+YIS+LRT V F+TLRSE
Sbjct: 1   MADTLPT----RSATDLFSDPIDSQPLWFKKSSFLQPEFDSEAYISDLRTLVSFDTLRSE 56

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           LQ HL+SL HELIDLINRDYADFVNLSTKLVDVD A+VRMRAPL ELREKI GFR ++E 
Sbjct: 57  LQTHLASLKHELIDLINRDYADFVNLSTKLVDVDGAIVRMRAPLTELREKILGFRESVES 116

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           +LVA+QNGL+QRSEA++ARE+LELLLDTFHVVSKVEKLIKELPS+PAD S+ DVN   R 
Sbjct: 117 TLVAVQNGLRQRSEASAAREILELLLDTFHVVSKVEKLIKELPSVPADWSNGDVNSMARS 176

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
           S+++  + Q  EN TN+RETQSMLLERIASEMNRLKFY+AHAQNLPF+ENMEKRI+SASL
Sbjct: 177 SLNNGISLQHAENETNLRETQSMLLERIASEMNRLKFYMAHAQNLPFVENMEKRIQSASL 236

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           LLDASLGHCFV  LEH++A  IYNCLRAYAA+DNTRNAE+IF  TVV PL+QK+IP   S
Sbjct: 237 LLDASLGHCFVDALEHRDATAIYNCLRAYAAVDNTRNAEDIFRMTVVLPLIQKVIPQ--S 294

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
             ++GASGDEL  DY+QI+Q + KDCKFLL+I+SAENSGLHVF+FLANSILKEVL+AIQK
Sbjct: 295 GVVSGASGDELADDYQQIEQHIVKDCKFLLEIASAENSGLHVFNFLANSILKEVLTAIQK 354

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPG FSPGRPT+FL+NYKSSLDFLA+LEGYCPSRSAVAKFRAE++Y+EFMKQWN+GVYF
Sbjct: 355 GKPGXFSPGRPTEFLKNYKSSLDFLAHLEGYCPSRSAVAKFRAESVYIEFMKQWNIGVYF 414

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLRFQEIAG+LDSAL A SL PVQ   S  GNSQ L LKQSVTLL+S++SCWR+DVF+L 
Sbjct: 415 SLRFQEIAGSLDSALIAGSLVPVQKLPSGPGNSQDLILKQSVTLLESLRSCWREDVFILS 474

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CS++FLRLSLQLLSRYSNWLSSGLAA  +G+A  NPG EWA SA P+DF+YV
Sbjct: 475 CSERFLRLSLQLLSRYSNWLSSGLAALKTGNAGRNPGFEWATSAVPEDFVYV 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456291|ref|XP_002279916.1| PREDICTED: conserved oligomeric Golgi complex subunit 2 [Vitis vinifera] gi|297734402|emb|CBI15649.3| unnamed protein product [Vitis vinifera]

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/532 (76%), Positives = 464/532 (87%), Gaps = 6/532 (1%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M D +PT    RSATDLFSDP DS PLWFK + FL P FDSE+YIS+LRT V F+TLRSE
Sbjct: 1   MADTLPT----RSATDLFSDPIDSQPLWFKKSSFLQPEFDSEAYISDLRTLVSFDTLRSE 56

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           LQ HL+SL HELIDLINRDYADFVNLSTKLVDVD A+VRMRAPL ELREKI GFR ++E 
Sbjct: 57  LQTHLASLKHELIDLINRDYADFVNLSTKLVDVDGAIVRMRAPLTELREKILGFRESVES 116

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           +LVA+QNGL+QRSEA++ARE+LELLLDTFHVVSKVEKLIKELPS+PAD S+ DVN   R 
Sbjct: 117 TLVAVQNGLRQRSEASAAREILELLLDTFHVVSKVEKLIKELPSVPADWSNGDVNSMARS 176

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
           S+++  + Q  EN TN+RETQSMLLERIASEMNRLKFY+AHAQNLPF+ENMEKRI+SASL
Sbjct: 177 SLNNGISLQHAENETNLRETQSMLLERIASEMNRLKFYMAHAQNLPFVENMEKRIQSASL 236

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           LLDASLGHCFV  LEH++A  IYNCLRAYAA+DNTRNAE+IF  TVV PL+QK+IP   S
Sbjct: 237 LLDASLGHCFVDALEHRDATAIYNCLRAYAAVDNTRNAEDIFRMTVVLPLIQKVIPQ--S 294

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
             ++GASGDEL  DY+QI+Q + KDCKFLL+I+SAENSGLHVF+FLANSILKEVL+AIQK
Sbjct: 295 GVVSGASGDELADDYQQIEQHIVKDCKFLLEIASAENSGLHVFNFLANSILKEVLTAIQK 354

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPG FSPGRPT+FL+NYKSSLDFLA+LEGYCPSRSAVAKFRAE++Y+EFMKQWN+GVYF
Sbjct: 355 GKPGTFSPGRPTEFLKNYKSSLDFLAHLEGYCPSRSAVAKFRAESVYIEFMKQWNIGVYF 414

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           SLRFQEIAG+LDSAL A SL PVQ   S  GNSQ L LKQSVTLL+S++SCWR+DVF+L 
Sbjct: 415 SLRFQEIAGSLDSALIAGSLVPVQKLPSGPGNSQDLILKQSVTLLESLRSCWREDVFILS 474

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CS++FLRLSLQLLSRYSNWLSSGLAA  +G+A  NPG EWA SA P+DF+YV
Sbjct: 475 CSERFLRLSLQLLSRYSNWLSSGLAALKTGNAGRNPGFEWATSAVPEDFVYV 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477117|ref|XP_003608844.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|355509899|gb|AES91041.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/532 (77%), Positives = 460/532 (86%), Gaps = 2/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M DPIP     RS T+LFSDP DSHPLWFK   FLSP+FDSESYISELRTFVPF+TLRSE
Sbjct: 1   MADPIPAHH--RSTTNLFSDPLDSHPLWFKPTSFLSPDFDSESYISELRTFVPFDTLRSE 58

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           L  +LSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPL+ELREKI+ FRG+++ 
Sbjct: 59  LNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVDV 118

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SLVA++NGLKQRSEAASARE LELLLDTFHVVSKVEKLIKELPS+P+D S+ DVNL E+ 
Sbjct: 119 SLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVNLSEKN 178

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
             S+  + Q VENGT+VRETQSMLLERIASEMNRLKFY+ HA+NLPFIENMEKRI++ASL
Sbjct: 179 PSSNGVSVQQVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASL 238

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           L+DASLGHCFV GLEH++A  IYNCLRAYAAIDNT+NAEE F  TVVAPL+QKIIPHG S
Sbjct: 239 LVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSS 298

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
              +G+SGD LE+DY+ IK+CV KDCKFLLDISSAENSGLHVFDFLANSIL+EVL AIQK
Sbjct: 299 AVASGSSGDGLENDYQLIKECVYKDCKFLLDISSAENSGLHVFDFLANSILREVLFAIQK 358

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPGAFS GRPT+FL+NYKSSL+FLAYLEGYCPSRSAV KFR+EAIY EFMKQWN+G YF
Sbjct: 359 GKPGAFSVGRPTEFLKNYKSSLEFLAYLEGYCPSRSAVVKFRSEAIYTEFMKQWNLGAYF 418

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           S+RFQEIAG+LDS LT +SL PVQN +  + N Q L LKQSV+LL+S+  CWR+D+  L 
Sbjct: 419 SVRFQEIAGSLDSVLTTSSLVPVQNLDPGEANYQDLKLKQSVSLLESLGLCWREDILALS 478

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSDKFLRLSLQLLSRYS WLSSGL AR S + S   G  WA+SAA DDFI V
Sbjct: 479 CSDKFLRLSLQLLSRYSTWLSSGLTARKSHNTSTGTGRGWAVSAAIDDFILV 530

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477119|ref|XP_003608845.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|355509900|gb|AES91042.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/532 (77%), Positives = 460/532 (86%), Gaps = 2/532 (0%)

Query: 1   MMDPIPTAPPPRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE 60
           M DPIP     RS T+LFSDP DSHPLWFK   FLSP+FDSESYISELRTFVPF+TLRSE
Sbjct: 1   MADPIPAHH--RSTTNLFSDPLDSHPLWFKPTSFLSPDFDSESYISELRTFVPFDTLRSE 58

Query: 61  LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEG 120
           L  +LSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPL+ELREKI+ FRG+++ 
Sbjct: 59  LNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVDV 118

Query: 121 SLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK 180
           SLVA++NGLKQRSEAASARE LELLLDTFHVVSKVEKLIKELPS+P+D S+ DVNL E+ 
Sbjct: 119 SLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVNLSEKN 178

Query: 181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL 240
             S+  + Q VENGT+VRETQSMLLERIASEMNRLKFY+ HA+NLPFIENMEKRI++ASL
Sbjct: 179 PSSNGVSVQQVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASL 238

Query: 241 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPS 300
           L+DASLGHCFV GLEH++A  IYNCLRAYAAIDNT+NAEE F  TVVAPL+QKIIPHG S
Sbjct: 239 LVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSS 298

Query: 301 EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQK 360
              +G+SGD LE+DY+ IK+CV KDCKFLLDISSAENSGLHVFDFLANSIL+EVL AIQK
Sbjct: 299 AVASGSSGDGLENDYQLIKECVYKDCKFLLDISSAENSGLHVFDFLANSILREVLFAIQK 358

Query: 361 GKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYF 420
           GKPGAFS GRPT+FL+NYKSSL+FLAYLEGYCPSRSAV KFR+EAIY EFMKQWN+G YF
Sbjct: 359 GKPGAFSVGRPTEFLKNYKSSLEFLAYLEGYCPSRSAVVKFRSEAIYTEFMKQWNLGAYF 418

Query: 421 SLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLP 480
           S+RFQEIAG+LDS LT +SL PVQN +  + N Q L LKQSV+LL+S+  CWR+D+  L 
Sbjct: 419 SVRFQEIAGSLDSVLTTSSLVPVQNLDPGEANYQDLKLKQSVSLLESLGLCWREDILALS 478

Query: 481 CSDKFLRLSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV 532
           CSDKFLRLSLQLLSRYS WLSSGL AR S + S   G  WA+SAA DDFI V
Sbjct: 479 CSDKFLRLSLQLLSRYSTWLSSGLTARKSHNTSTGTGRGWAVSAAIDDFILV 530

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	546
TAIR|locus:2126808	756	AT4G24840 "AT4G24840" [Arabido	0.983	0.710	0.663	8.5e-184
ZFIN|ZDB-GENE-040426-2671	730	cog2 "component of oligomeric	0.543	0.406	0.294	2.9e-53
UNIPROTKB|E1C7Y1	739	COG2 "Uncharacterized protein"	0.402	0.297	0.323	2.8e-49
UNIPROTKB|Q14746	738	COG2 "Conserved oligomeric Gol	0.481	0.356	0.292	2.4e-48
UNIPROTKB|F1MQ89	739	COG2 "Uncharacterized protein"	0.402	0.297	0.327	2.8e-48
MGI|MGI:1923582	731	Cog2 "component of oligomeric	0.443	0.331	0.293	1.8e-46
UNIPROTKB|F1P8W5	678	COG2 "Uncharacterized protein"	0.523	0.421	0.283	9.9e-45
UNIPROTKB|B7Z2Y2	679	COG2 "cDNA FLJ55945, highly si	0.481	0.387	0.292	3.6e-42
UNIPROTKB|F1RG46	664	COG2 "Uncharacterized protein"	0.543	0.447	0.280	1.1e-35
UNIPROTKB|F5H1E5	622	COG2 "Conserved oligomeric Gol	0.481	0.422	0.292	9.8e-32

TAIR|locus:2126808 AT4G24840 "AT4G24840" [Arabidopsis thaliana (taxid:3702)]

 Score = 1783 (632.7 bits), Expect = 8.5e-184, P = 8.5e-184
 Identities = 363/547 (66%), Positives = 420/547 (76%)

Query:     1 MMDPIPTAP-P---PRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFET 56
             M D + T+P P   PRSATD FSDP DSHPLWFK +LFLSPNFDSESYISELRTFVPF+T
Sbjct:     1 MSDLVATSPSPSSAPRSATDFFSDPYDSHPLWFKPSLFLSPNFDSESYISELRTFVPFDT 60

Query:    57 LRSELQAHLSSLNHELIDLINRDYADFVNLSTKLXXXXXXXXRMRAPLLELREKIDGFRG 116
             LRSEL++HL+SLN EL+DLINRDYADFVNLSTKL        RMRAPLLELREKI GFRG
Sbjct:    61 LRSELRSHLASLNRELVDLINRDYADFVNLSTKLVDIDAAVVRMRAPLLELREKITGFRG 120

Query:   117 ALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNL 176
             ++E +L AL+NGL+QRS+AA+AREVLELLLDTFHVVSKVEKLIK LPS P+D  + D N 
Sbjct:   121 SVEAALFALRNGLQQRSDAAAAREVLELLLDTFHVVSKVEKLIKVLPSTPSDWQNEDANS 180

Query:   177 EERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIK 236
               R SM+   + Q  ++GT +RETQSMLLERIASEMNRLKFY+AHAQNLPFIENMEKRI+
Sbjct:   181 MGRSSMNDENSTQ--QDGTTMRETQSMLLERIASEMNRLKFYMAHAQNLPFIENMEKRIQ 238

Query:   237 SASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIP 296
             SAS+LLDASLGHCF+ GL + + +V+YNCLRAYAAIDNT  AEEIF  T+VAP +QKII 
Sbjct:   239 SASVLLDASLGHCFIDGLNNSDTSVLYNCLRAYAAIDNTNAAEEIFRTTIVAPFIQKIIT 298

Query:   297 HGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLS 356
             H  +   AG S DELE+DY+QIK  + KDCK LL+ISS + SGLHVFDFLANSILKEVL 
Sbjct:   299 HETTTNAAGTSEDELENDYKQIKHFIAKDCKMLLEISSTDKSGLHVFDFLANSILKEVLW 358

Query:   357 AIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNV 416
             AIQK KPGAFSPGRPT+FL+NYK+SLDFLAYLEGYCPSRSAV KFRAEAI VEFMKQWNV
Sbjct:   359 AIQKVKPGAFSPGRPTEFLKNYKASLDFLAYLEGYCPSRSAVTKFRAEAICVEFMKQWNV 418

Query:   417 GVYFSLRFQEIXXXXXXXXXXXXXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDV 476
             GVYFSLRFQEI               V            L L+QS TLL+ ++SCW++DV
Sbjct:   419 GVYFSLRFQEIAGALDSALTSPSL--VFIQDSDKESSLNLILRQSDTLLECLRSCWKEDV 476

Query:   477 FLLPCSDKFXXXXXXXXXXYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYV-RLA 535
              +   +DKF          YS W+SS L  R S +AS +PG EWA+SA  +DF+YV    
Sbjct:   477 LVFSAADKFLRLTLQLLSRYSFWVSSALNNRKS-NASPSPGCEWAVSATAEDFVYVIHDV 535

Query:   536 PCPISRI 542
              C +S +
Sbjct:   536 NCLVSEV 542

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0007030 "Golgi organization" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

ZFIN|ZDB-GENE-040426-2671 cog2 "component of oligomeric golgi complex 2" [Danio rerio (taxid:7955)]

 Score = 396 (144.5 bits), Expect = 2.9e-53, Sum P(2) = 2.9e-53
 Identities = 93/316 (29%), Positives = 157/316 (49%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  N +++ 
Sbjct:   164 ILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLIQGLQTSNIDIVR 223

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P M ++I     E    +S + L+  Y ++ + V 
Sbjct:   224 HCLRTYATIDKTRDAEALVGQVLVKPYMDEVIV----EQFVKSSPNGLKVMYAKLLEFVP 279

Query:   324 KDCKFLLDIS----SAENSGLHV-FDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +++    S++ + +   +DFL NS+  E++  +++  P  F+PG P  F   Y
Sbjct:   280 HHCRLLREVTGGAISSDKADIVPGYDFLVNSVWPEIIRGVEERVPSLFNPGNPDVFYERY 339

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXXXX 438
               S+DF+   E  C S+++V + RA   Y  F  +WN+ VYF LRF+EI           
Sbjct:   340 TVSMDFVRKFERQCGSQASVKRLRAHPSYQSFHNKWNLPVYFQLRFKEIAGSLESAIADG 399

Query:   439 X-XXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFXXXXXXXXXXYS 497
                 PV           +  L+ +  L   +  CW   V+L P + +F          YS
Sbjct:   400 LEATPVGS---------SFHLQVTEVLWSCVCRCWTDQVYLPPLAHRFWKLTLQLISRYS 450

Query:   498 NWLSSGLAARSSGHAS 513
              +L+  L   SS  AS
Sbjct:   451 TFLTEVLTKTSSTEAS 466

GO:0016020 "membrane" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|E1C7Y1 COG2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
 Identities = 74/229 (32%), Positives = 131/229 (57%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  N ++I 
Sbjct:   169 VLERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSNVDIIR 228

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P + ++I     E    A  + L++ Y ++ + V 
Sbjct:   229 HCLRTYATIDKTRDAEALVGQVLVKPYIDEVIV----EQYVQAHPNGLQAMYNKLLEFVP 284

Query:   324 KDCKFLLDIS----SAENSGLHV-FDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +++    S+E + +   +DFL NS+  E++  +++  P  F+PG P  F   Y
Sbjct:   285 HHCRLLREVTGGAISSEKADIVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGNPDVFHEKY 344

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEI 427
              +S+DF+   E  C S+++V + R+   Y  F  +WN+ VYF +RF+EI
Sbjct:   345 TTSMDFVRKFERQCGSQASVRRLRSHPSYHSFNNKWNLPVYFQIRFREI 393

GO:0007030 "Golgi organization" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0017119 "Golgi transport complex" evidence=IEA

UNIPROTKB|Q14746 COG2 "Conserved oligomeric Golgi complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 363 (132.8 bits), Expect = 2.4e-48, Sum P(2) = 2.4e-48
 Identities = 82/280 (29%), Positives = 142/280 (50%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  + ++I 
Sbjct:   169 ILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIR 228

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P + ++I     E    +  + L+  Y ++ + V 
Sbjct:   229 HCLRTYATIDKTRDAEALVGQVLVKPYIDEVI----IEQFVESHPNGLQVMYNKLLEFVP 284

Query:   324 KDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +     ISS + + +  +DFL NS+  +++  +++  P  F+PG P  F   Y
Sbjct:   285 HHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKY 344

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXXXX 438
               S+DF+  LE  C S+++V + RA   Y  F K+WN+ VYF +RF+EI           
Sbjct:   345 TISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAA---- 400

Query:   439 XXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFL 478
                 +              L  S     S++ CW  ++FL
Sbjct:   401 ----LTDVLEDAPAESPYCLLASHRTWSSLRRCWSDEMFL 436

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IMP

GO:0017119 "Golgi transport complex" evidence=IDA;IMP

GO:0008565 "protein transporter activity" evidence=IMP

GO:0007030 "Golgi organization" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0006486 "protein glycosylation" evidence=TAS

GO:0006886 "intracellular protein transport" evidence=TAS

GO:0009312 "oligosaccharide biosynthetic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MQ89 COG2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 362 (132.5 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
 Identities = 75/229 (32%), Positives = 131/229 (57%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ LP ++ +  RI   + +L  SL    + GL+  + ++I 
Sbjct:   169 ILERIATEFNQLQFHAVQSKGLPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSSVDIIR 228

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P + ++I     E +  +   +L+  Y+++ + V 
Sbjct:   229 HCLRTYATIDKTRDAEALVGQVLVKPYVDEVI----LEQIVDSHLSDLQLMYDKLLEFVP 284

Query:   324 KDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +     ISS + + +  +DFL NS+  E++  +++  P  F+PG P  F + Y
Sbjct:   285 HHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGDPDAFHQKY 344

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEI 427
               S+DF+   E  C S+++V + RA   Y  F  +WN+ VYF +RF+EI
Sbjct:   345 TISMDFVRTFERQCGSQASVKRLRAHPAYHSFNNKWNLPVYFQIRFREI 393

GO:0017119 "Golgi transport complex" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

MGI|MGI:1923582 Cog2 "component of oligomeric golgi complex 2" [Mus musculus (taxid:10090)]

 Score = 350 (128.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 76/259 (29%), Positives = 137/259 (52%)

Query:   174 VNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEK 233
             +N +  K +SS     P+  G         +LERIA+E N+L+F+   ++ +P ++ +  
Sbjct:   147 LNSQSSKDVSSQEASSPLLTG--------QVLERIATEFNQLQFHAVQSKGMPLLDKVRP 198

Query:   234 RIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQK 293
             RI   + +L  SL    + GL+  + +++ +CLR YA ID T++AE +    +V P + +
Sbjct:   199 RIAGITAMLQQSLEGLLLEGLQTSDVDIVRHCLRTYATIDKTQDAEALVGQVLVKPYVNE 258

Query:   294 IIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISS---AENSGLHV--FDFLAN 348
             +I     E    +    L+  Y ++ + V   C+ L +++    +   G  V  +DFL N
Sbjct:   259 VIV----EQFVESHPSSLQLMYNKLLEFVPHHCRLLREVTGGAVSSEKGTIVPGYDFLVN 314

Query:   349 SILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYV 408
             S+  E++  +++  P  F+PG P  F + Y  S+DF+   E  C S+++V + RA   Y 
Sbjct:   315 SVWPEIVRGLEEKLPSLFNPGDPDAFHQKYTVSMDFVQRFERQCGSQASVKRLRAHPAYH 374

Query:   409 EFMKQWNVGVYFSLRFQEI 427
              F  +WN+ VYF +RF+E+
Sbjct:   375 NFSNKWNLPVYFQIRFREV 393

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005795 "Golgi stack" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISO

GO:0007030 "Golgi organization" evidence=ISO

GO:0008565 "protein transporter activity" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0017119 "Golgi transport complex" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

UNIPROTKB|F1P8W5 COG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 371 (135.7 bits), Expect = 9.9e-45, Sum P(2) = 9.9e-45
 Identities = 86/303 (28%), Positives = 148/303 (48%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL   N ++I 
Sbjct:   110 ILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLRTSNVDIIR 169

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P M ++I     E +  +  + L+  Y ++ + V 
Sbjct:   170 HCLRTYATIDKTRDAEALVGQVLVKPYMDEVIV----EQIVESHPNGLQIMYNKLLEFVP 225

Query:   324 KDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +     ISS + + +  +DFL NS+  E++  +++  P  F+PG P  F   Y
Sbjct:   226 HHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGNPDAFHEKY 285

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXXXX 438
               S+DF+   E  C S+++V + RA   Y  F  +WN+ VYF +RF+EI           
Sbjct:   286 TISMDFVRAFERQCGSQASVRRLRAHPAYHSFNNKWNLPVYFQIRFREIAGSLEAA---- 341

Query:   439 XXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFXXXXXXXXXXYSN 498
                 +           +  L  S     S++ CW  ++FL   + +           YS 
Sbjct:   342 ----LTDVLEDAPAGSSFCLLASHRTWSSLQKCWSDEMFLPALAHRLWRLTLQILARYSM 397

Query:   499 WLS 501
             ++S
Sbjct:   398 FVS 400

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

UNIPROTKB|B7Z2Y2 COG2 "cDNA FLJ55945, highly similar to Conserved oligomeric Golgi complex component 2" [Homo sapiens (taxid:9606)]

 Score = 363 (132.8 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
 Identities = 82/280 (29%), Positives = 142/280 (50%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  + ++I 
Sbjct:   110 ILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIR 169

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P + ++I     E    +  + L+  Y ++ + V 
Sbjct:   170 HCLRTYATIDKTRDAEALVGQVLVKPYIDEVI----IEQFVESHPNGLQVMYNKLLEFVP 225

Query:   324 KDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +     ISS + + +  +DFL NS+  +++  +++  P  F+PG P  F   Y
Sbjct:   226 HHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKY 285

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXXXX 438
               S+DF+  LE  C S+++V + RA   Y  F K+WN+ VYF +RF+EI           
Sbjct:   286 TISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAA---- 341

Query:   439 XXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFL 478
                 +              L  S     S++ CW  ++FL
Sbjct:   342 ----LTDVLEDAPAESPYCLLASHRTWSSLRRCWSDEMFL 377

GO:0007030 "Golgi organization" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1RG46 COG2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 366 (133.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
 Identities = 89/317 (28%), Positives = 151/317 (47%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL   N ++I 
Sbjct:    91 ILERIATEFNQLQFHAVQSKGMPLLDKIRPRIAGITAMLQQSLEGLLLEGLRTSNVDIIR 150

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P M ++I    +E +   +   L+  Y ++ + V 
Sbjct:   151 HCLRTYATIDKTRDAEALVGQVLVKPYMDEVI----TEQIVDTNLSGLQLMYHKLLEFVP 206

Query:   324 KDCKFLLD-----ISSAENSGLHV--FDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLR 376
               C+ L +     IS+    G  V  +DFL NS+  E++  +++  P  F+PG P  F +
Sbjct:   207 HHCRLLREVTGGAISTYSEKGNTVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGNPDTFHQ 266

Query:   377 NYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXX 436
              Y  S+DF+   E  C S+++V + RA   Y  F  +WN+ VYF +RF+E+         
Sbjct:   267 KYTISMDFVRNFERQCGSQASVKRLRAHPAYHSFNNKWNLPVYFQIRFREVAGSLEAA-- 324

Query:   437 XXXXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFXXXXXXXXXXY 496
                   +              L  S     S++ CW   +FL P + +           Y
Sbjct:   325 ------LTDVLEDAPAGSPFCLLASHRTWSSLQRCWSNQMFLPPLAHRLWRLTLQILARY 378

Query:   497 SNWLSSGLAARSSGHAS 513
             + +L   L+ R   + S
Sbjct:   379 AVFLKE-LSLRPISNES 394

GO:0017119 "Golgi transport complex" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

UNIPROTKB|F5H1E5 COG2 "Conserved oligomeric Golgi complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 363 (132.8 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 82/280 (29%), Positives = 142/280 (50%)

Query:   204 LLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIY 263
             +LERIA+E N+L+F+   ++ +P ++ +  RI   + +L  SL    + GL+  + ++I 
Sbjct:    53 ILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIR 112

Query:   264 NCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE 323
             +CLR YA ID TR+AE +    +V P + ++I     E    +  + L+  Y ++ + V 
Sbjct:   113 HCLRTYATIDKTRDAEALVGQVLVKPYIDEVI----IEQFVESHPNGLQVMYNKLLEFVP 168

Query:   324 KDCKFLLD-----ISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNY 378
               C+ L +     ISS + + +  +DFL NS+  +++  +++  P  F+PG P  F   Y
Sbjct:   169 HHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKY 228

Query:   379 KSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRFQEIXXXXXXXXXXX 438
               S+DF+  LE  C S+++V + RA   Y  F K+WN+ VYF +RF+EI           
Sbjct:   229 TISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAA---- 284

Query:   439 XXXPVXXXXXXXXXXXALTLKQSVTLLDSMKSCWRQDVFL 478
                 +              L  S     S++ CW  ++FL
Sbjct:   285 ----LTDVLEDAPAESPYCLLASHRTWSSLRRCWSDEMFL 320

GO:0007030 "Golgi organization" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	546
pfam06148	133	pfam06148, COG2, COG (conserved oligomeric Golgi)	7e-46
pfam08700	87	pfam08700, Vps51, Vps51/Vps67	0.003

>gnl|CDD|218912 pfam06148, COG2, COG (conserved oligomeric Golgi) complex component, COG2

 Score =  157 bits (398), Expect = 7e-46
 Identities = 62/133 (46%), Positives = 91/133 (68%)

Query: 27  LWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNL 86
           L F  + FL+P+FD + ++SELR  VP E+LR +L+A+L  L  ELI+LIN DYADFV+L
Sbjct: 1   LCFDKHEFLAPDFDPDQFLSELRKGVPLESLRDDLRAYLKLLKSELIELINEDYADFVSL 60

Query: 87  STKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLL 146
           ST LV +D  + R+R PLL LR++++  R  LE  L  ++  L+++ +    +E L+LLL
Sbjct: 61  STNLVGLDEKLERIRVPLLALRKEVESVRSELEARLEEVEAKLEEKKDLREKKESLKLLL 120

Query: 147 DTFHVVSKVEKLI 159
           D  HVV K+E L+
Sbjct: 121 DLDHVVEKLEDLL 133

The COG complex comprises eight proteins COG1-8. The COG complex plays critical roles in Golgi structure and function. The proposed function of the complex is to mediate the initial physical contact between transport vesicles and their membrane targets. A comparable role in tethering vesicles has been suggested for at least six additional large multisubunit complexes, including the exocyst, a complex that mediates trafficking to the plasma membrane. COG2 structure reveals a six-helix bundle with few conserved surface features but a general resemblance to recently determined crystal structures of four different exocyst subunits. These bundles inCOG2 may act as platforms for interaction with other trafficing proteins including SNAREs (soluble N-ethylmaleimide factor attachment protein receptors) and Rabs. Length = 133

>gnl|CDD|219977 pfam08700, Vps51, Vps51/Vps67

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 34  FLSPNFDSESYISELRTFVPFETLR---SELQAHLSSLNHELIDLINRDYADFVNLSTKL 90
             SP+FD++ Y SEL +    E LR    +L+A +  L  EL  L+  +Y D +  +  +
Sbjct: 1   LSSPSFDADRYFSELLSKATLEELRQIEKKLRAEIEELQEELRQLVYENYRDLIKAADTI 60

Query: 91  VDVDAAVVRMRAPLLELREKIDGFR 115
             + + +  +   L EL++ ++   
Sbjct: 61  SKMKSEMESLSQKLSELKQALEKLS 85

This family includes a presumed domain found in a number of components of vesicular transport. The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1. Cog1_N is the N-terminus of the Cog1 subunit of the eight-unit Conserved Oligomeric Golgi (COG) complex that participates in retrograde vesicular transport and is required to maintain normal Golgi structure and function. The subunits are located in two lobes and Cog1 serves to bind the two lobes together probably via the highly conserved N-terminal domain of approximately 85 residues. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	546
KOG2307	705	consensus Low density lipoprotein receptor [Intrac	100.0
PF06148	133	COG2: COG (conserved oligomeric Golgi) complex com	100.0
PF10191	766	COG7: Golgi complex component 7 (COG7); InterPro:	99.11
PF10475	291	DUF2450: Protein of unknown function N-terminal do	98.79
PF06248	593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	98.58
PF10392	132	COG5: Golgi transport complex subunit 5; InterPro:	98.38
PF08700	87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	98.2
PF04100	383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	97.65
KOG2346	636	consensus Uncharacterized conserved protein [Funct	97.25
KOG2211	797	consensus Predicted Golgi transport complex 1 prot	96.97
PF04048	142	Sec8_exocyst: Sec8 exocyst complex component speci	96.86
KOG4182	828	consensus Uncharacterized conserved protein [Funct	96.6
PF15469	182	Sec5: Exocyst complex component Sec5	96.02
PF04124	338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	95.35
KOG2115	951	consensus Vacuolar sorting protein VPS45 [Intracel	95.0
KOG2180	793	consensus Late Golgi protein sorting complex, subu	94.99
PF07393	710	Sec10: Exocyst complex component Sec10; InterPro:	93.06
KOG2307	705	consensus Low density lipoprotein receptor [Intrac	83.13
smart00762	324	Cog4 COG4 transport protein. This region is found	81.35
KOG2176	800	consensus Exocyst complex, subunit SEC15 [Intracel	80.67

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.4e-118  Score=934.55  Aligned_cols=477  Identities=40%  Similarity=0.611  Sum_probs=428.2

Q ss_pred             CCCCCcCCCCCCCCCCCccCcCCCCCCCCChHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCc
Q 009030           11 PRSATDLFSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKL   90 (546)
Q Consensus        11 ~~~~~~~~~~p~~~~~l~F~~~~F~~~dFdvd~FLs~~rr~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L   90 (546)
                      ++|+...++.|.++++|||||+.|+++|||||.|++++|.+++||+||+|||.|+|.|+++||||||+|||||||||+||
T Consensus         5 k~sa~~~~g~~~d~~kLcFdk~eFmkedFdve~f~s~~R~~v~letLrddLrlylksl~~aMieLIN~DYADFVnLStnL   84 (705)
T KOG2307|consen    5 KTSAALPNGFYIDESKLCFDKTEFMKEDFDVERFMSLARQKVDLETLRDDLRLYLKSLQNAMIELINDDYADFVNLSTNL   84 (705)
T ss_pred             cccccCCCCCCCCccccccChhhhccccCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhhhhh
Confidence            46677888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCC
Q 009030           91 VDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGS  170 (546)
Q Consensus        91 ~G~d~~i~~l~~pL~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~  170 (546)
                      ||+|++|++|++||+++|++|.+.|+.|.+...++++++.+...+|+.|.   .+++..+.+.++|+|...+.+.|.+++
T Consensus        85 Vgld~aln~i~qpL~qlreei~s~rgsV~ea~~alr~q~se~~~~Re~k~---~lldl~~v~~~ieKL~k~L~s~psk~q  161 (705)
T KOG2307|consen   85 VGLDDALNKIEQPLNQLREEIKSTRGSVGEAERALRQQCSELCSNREKKI---ELLDLIYVLVAIEKLSKMLLSPPSKEQ  161 (705)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            99999999999999999999999999999999999976665555555554   445556666666666666666665443


Q ss_pred             CcccchhhhhccCCCCCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHH
Q 009030          171 DFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCF  250 (546)
Q Consensus       171 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~  250 (546)
                      .       +              |       +..|||+|.|+|||+||+++++++ ++.++++||+.++..|++.|+.+|
T Consensus       162 ~-------~--------------~-------a~sLERiAlelnqlkf~a~h~k~~-l~p~~e~ria~~~~~L~qsl~~lf  212 (705)
T KOG2307|consen  162 Q-------D--------------G-------ATSLERIALELNQLKFHASHLKGS-LFPHSEERIAAEKIILSQSLAVLF  212 (705)
T ss_pred             c-------c--------------c-------cchHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHhhHHHHHHHHHHHHH
Confidence            2       0              0       113999999999999999999999 999999999999999999999999


Q ss_pred             HhhhhhcCHHHHHHHHHHHHHhcChhhHHHHHHHHhhHHHHhhhcCCCCCccccCCCcchHHHHHHHHHHHHH-hhhHHH
Q 009030          251 VHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVE-KDCKFL  329 (546)
Q Consensus       251 ~~~l~~~~~~~l~~cLr~Y~~ld~~~~ae~~~r~~vV~P~l~~ii~~~~l~~~~~~s~~~L~~~y~~il~fv~-~~~~~l  329 (546)
                      .+|+++ +...+.+|||+|++|+.++.||.+||..||+||+.++|+++..    .+||+||.++|++|++||. ++|+.+
T Consensus       213 ~eglqs-a~~~l~nclriYatld~t~~ae~lfr~~vvapyi~evI~eq~~----e~sp~gl~~~ykqilefv~~h~c~ll  287 (705)
T KOG2307|consen  213 AEGLQS-AAGDLQNCLRIYATLDLTESAESLFRLLVVAPYIAEVINEQHD----ETSPSGLLKLYKQILEFVKKHRCTLL  287 (705)
T ss_pred             HHHhhc-cHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhc----cCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            999964 8899999999999999999999999999999999999999876    6899999999999999999 888888


Q ss_pred             HHHhhhccCCCccccccccccHHHHHHHHHhcCCccccCCCchHHHHHHHHHHHHHHHHHh--hCCCHHHHHHHhhchhH
Q 009030          330 LDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEG--YCPSRSAVAKFRAEAIY  407 (546)
Q Consensus       330 l~it~~~~~~~~~~dfl~nsvw~ev~~~l~~~l~~iFapG~Pd~F~~nY~~t~~Fl~~lE~--~c~S~~~v~~lR~~~~y  407 (546)
                      .+++....+|++|||||+||+|++|..+|++.||++|+||||++||+||++|++||++||+  .|+|+.+|.+||+||.|
T Consensus       288 re~tssdk~g~~~fdFlvnS~l~~ilt~iek~mps~f~Pgnp~~F~ekyk~t~DFl~~le~~~tC~s~~avt~~Rah~~~  367 (705)
T KOG2307|consen  288 REMTSSDKRGLPGFDFLVNSLLTFILTFIEKCMPSVFVPGNPRLFHEKYKLTQDFLDNLESSHTCRSMLAVTKFRAHAIC  367 (705)
T ss_pred             HHhchhhcCCCchHHHHHHHHHHHHHHHHHHhcccccCCCCcHHHHHHHHHHHHHHHhccccCcCchHHHHHHHHhhhHH
Confidence            8899777678999999999999999999999999999999999999999999999999999  99999999999999999


Q ss_pred             HHHHHhhccchhHHHHHHHHHHhHHHhhcccccccccCCCCCCCCCcccchhhHHHHHHHHhhcccCCccccccchHHHH
Q 009030          408 VEFMKQWNVGVYFSLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDVFLLPCSDKFLR  487 (546)
Q Consensus       408 ~~f~~rWnLpVYFqLRfqEIa~~lE~aL~~~~~~~~~~~~~~~~~~~~f~l~~s~~l~~~l~~cWs~~VfL~~L~~rFwr  487 (546)
                      ++||+|||||||||||||||||++|++|+ +.......+.++.+++.+|++.+|.++|+||.+||+||||||++.|||||
T Consensus       368 ~sF~kkwNl~VYFqlrfqeiag~ldaaLt-p~~~~d~l~d~~~Est~~l~l~as~a~~ealrrcWsddvylp~~vdKl~r  446 (705)
T KOG2307|consen  368 VSFMKKWNLPVYFQLRFQEIAGQLDAALT-PEMFADPLTDENRESTPQLHLGASRAIIEALRRCWSDDVYLPPIVDKLWR  446 (705)
T ss_pred             HHHHHhcCcceeEeeeHHHHHHHHHHhcC-chhhcccccccccccCccchhhHhHHHHHHHHHHccccccchhhHHHHHH
Confidence            99999999999999999999999999998 55444444455556777999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcccccCCCCCCCCCccccccCCCceEeeee
Q 009030          488 LSLQLLSRYSNWLSSGLAARSSGHASFNPGNEWAISAAPDDFIYVRL  534 (546)
Q Consensus       488 LtLQllsRy~~Wi~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  534 (546)
                      ||||+++||+.|++.. +..++   |.++  .|   ++.++|+|||-
T Consensus       447 ltlQlllRysrwisai-tns~g---s~~s--kp---~trtqlvyv~h  484 (705)
T KOG2307|consen  447 LTLQLLLRYSRWISAI-TNSFG---SEKS--KP---ATRTQLVYVRH  484 (705)
T ss_pred             HHHHHHHHHhHHHHHH-HhccC---CCCC--CC---cchhheeeeec
Confidence            9999999999999943 43332   2222  67   78899999994

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex

Probab=100.00  E-value=1.5e-34  Score=263.86  Aligned_cols=133  Identities=38%  Similarity=0.680  Sum_probs=47.8

Q ss_pred             CccCcCCCCCCCCChHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHH
Q 009030           27 LWFKSNLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLE  106 (546)
Q Consensus        27 l~F~~~~F~~~dFdvd~FLs~~rr~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~  106 (546)
                      |||++++|+.|+||||+||.++|||+|||+||+||+.|++.|+++|++|||+||+|||+||++|+|++++|.+|+.||.+
T Consensus         1 lcf~~~~F~~~~Fd~d~Fl~~~~~~~~Le~L~~dL~~~~~~L~~~Li~lIN~dY~dFv~Ls~~L~g~~~~i~~l~~~L~~   80 (133)
T PF06148_consen    1 LCFDKEEFTKPDFDVDEFLSSNRRYVSLEDLRKDLRSYSKELKNELIELINDDYADFVSLSTNLVGMDEKIEELRKPLSQ   80 (133)
T ss_dssp             -------------------------------------------------------------------------HHHHHHH
T ss_pred             CCccccccCCCCCCHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009030          107 LREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLI  159 (546)
Q Consensus       107 lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL  159 (546)
                      ++++|.++++.+.+..+++++.|++|+.++..|+.+++++.+.++|+++|+||
T Consensus        81 ~~~~v~~~~~~l~~~~~~i~~~l~~~~~l~~~k~~l~~~l~~~~~~~kle~ll  133 (133)
T PF06148_consen   81 FREEVESVRDELDNTQEEIEDKLEERKELREEKALLKLLLDISESLEKLEDLL  133 (133)
T ss_dssp             HHHHHHHHHHS-STTHHHHHHHHHHHHHHHHHHHT-SSSSHHH----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccC
Confidence            99999999999999999999999999999999999999999999999999986

The COG complex comprises eight proteins COG1-8 and plays critical roles in Golgi structure and function [].; PDB: 2JQQ_A.

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []

Probab=99.11  E-value=2.7e-07  Score=106.64  Aligned_cols=304  Identities=19%  Similarity=0.275  Sum_probs=193.7

Q ss_pred             CCCCCCCCChHHHHh-hcc-CCCC---------hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhh
Q 009030           32 NLFLSPNFDSESYIS-ELR-TFVP---------FETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRM  100 (546)
Q Consensus        32 ~~F~~~dFdvd~FLs-~~r-r~~s---------Le~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l  100 (546)
                      +.|..++|||-+|+. .++ ++-.         +.+|-.-|+.|.+.++.+|=+-+.+=-       .++--....|..|
T Consensus         3 s~f~~~~FD~~~WIN~~~~~~~~~~~~~~~d~~ls~l~~kLql~~qe~~~~le~~~~q~l-------~~~Pr~~~ev~~l   75 (766)
T PF10191_consen    3 SAFSDDDFDVKAWINAALKSRSKDEALEKADAHLSSLVMKLQLYSQEVNASLEETSQQAL-------QRVPRVLREVDRL   75 (766)
T ss_pred             hhhCcCCCCHHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhccHHHHHHHHH
Confidence            679999999999997 444 2222         666777788888888888777665432       2333334444445


Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcc
Q 009030          101 RAPLLELREKIDGFRGALEGSLV-------ALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFD  173 (546)
Q Consensus       101 ~~pL~~lr~~V~~~r~~v~~~~~-------~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~  173 (546)
                      +.....++.++..++++++.+..       .+...=.-|.+++.++..|+---.-......+|.++..            
T Consensus        76 ~~ea~~L~~~~~~v~~~~~~~e~~t~~s~~~L~~ld~vK~rm~~a~~~L~EA~~w~~l~~~v~~~~~~------------  143 (766)
T PF10191_consen   76 RQEAASLQEQMASVQEEIKAVEQDTAQSMAQLAELDSVKSRMEAARETLQEADNWSTLSAEVDDLFES------------  143 (766)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc------------
Confidence            55555555555555544443322       22222122444555555554433333333334444321            


Q ss_pred             cchhhhhccCCCCCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHHHhh
Q 009030          174 VNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHG  253 (546)
Q Consensus       174 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~  253 (546)
                                                   ..+..+|.-...++--..--++.|=....+..++..++.|...+...+.++
T Consensus       144 -----------------------------~d~~~~a~~l~~m~~sL~~l~~~pd~~~r~~~le~l~nrLEa~vsp~Lv~a  194 (766)
T PF10191_consen  144 -----------------------------GDIAKIADRLAEMQRSLAVLQDVPDYEERRQQLEALKNRLEALVSPQLVQA  194 (766)
T ss_pred             -----------------------------CCHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence                                         015556655555554444446788777778999999999999999999999


Q ss_pred             hhhcCHHHHHHHHHHHHHhcChhhHHHHHHHHhhHHHHhhh---cCCCCCccccCCCcchHHHHHHHHHHHHHhhhHHHH
Q 009030          254 LEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKI---IPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLL  330 (546)
Q Consensus       254 l~~~~~~~l~~cLr~Y~~ld~~~~ae~~~r~~vV~P~l~~i---i~~~~l~~~~~~s~~~L~~~y~~il~fv~~~~~~ll  330 (546)
                      ++.++.+...++..+|..||+...++..+.+.-..|..+.=   .....    ..+-.+-|.+.|+.++..+..+++-..
T Consensus       195 l~~~~~~~~~~~~~if~~i~R~~~l~~~Y~~~r~~~l~~~W~~~~~~~~----~~~~~~~L~~fyd~ll~~l~~E~~w~~  270 (766)
T PF10191_consen  195 LNSRDVDAAKEYVKIFSSIGREPQLEQYYCKCRKAPLQRLWQEYCQSDQ----SQSFAEWLPSFYDELLSLLHQELKWCS  270 (766)
T ss_pred             HHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc----chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998888776552   22110    012345688999999999988887765


Q ss_pred             HHhhhccCCCccccccccccHHHHHHHHH----hcCCccccCCCc----hHHHHHHHHHHHHHHHHHhhCCC
Q 009030          331 DISSAENSGLHVFDFLANSILKEVLSAIQ----KGKPGAFSPGRP----TQFLRNYKSSLDFLAYLEGYCPS  394 (546)
Q Consensus       331 ~it~~~~~~~~~~dfl~nsvw~ev~~~l~----~~l~~iFapG~P----d~F~~nY~~t~~Fl~~lE~~c~S  394 (546)
                      .+=...      +. ++-.++.++...|.    .++..+.....|    .....-|.+|..|...++....+
T Consensus       271 ~vF~~~------~~-~~~~ll~~~L~~L~PS~~~~l~~al~~~~~~~~L~~L~~l~~~t~~Fa~~l~~~l~~  335 (766)
T PF10191_consen  271 QVFPDE------SP-VLPKLLAETLSALQPSFPSRLSSALKRAGPETKLETLIELYQATEHFARNLEHLLSS  335 (766)
T ss_pred             HHcCCc------hh-HHHHHHHHHHHhcCccHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            443211      22 34444444444443    333333333333    56778899999999999996444

COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known

Probab=98.79  E-value=5.2e-06  Score=85.73  Aligned_cols=215  Identities=14%  Similarity=0.228  Sum_probs=155.1

Q ss_pred             CCCCCCCCChHHHHh-hccCC-CC---hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHH
Q 009030           32 NLFLSPNFDSESYIS-ELRTF-VP---FETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLE  106 (546)
Q Consensus        32 ~~F~~~dFdvd~FLs-~~rr~-~s---Le~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~  106 (546)
                      +.|-.++|||..|.- .+... .+   ++.++..|..|+..+...|+..|.+.|.+|+.=-+++..+.+.+..--.-+..
T Consensus         6 ~~yF~~~FD~~~~~L~~l~~~~~~~~~i~~~~ekLs~~ldvVe~~L~~~I~~~s~~f~~a~~~v~el~~~l~~a~~~~~~   85 (291)
T PF10475_consen    6 AIYFDEDFDPVRYELEKLPEDELDLEDIEELQEKLSHYLDVVEKKLSREISEKSDSFFQAMSSVQELQDELEEALVICKN   85 (291)
T ss_pred             HhhcCCCCCchHHHHHhCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456667999998863 44444 44   45558899999999999999999999999999988988888888888888888


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhhccCCCC
Q 009030          107 LREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSAT  186 (546)
Q Consensus       107 lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~~  186 (546)
                      +|+.+..++..+....-.|-..-++|+.+..-...|+.+..+.+.-.+++.++..  .             +-       
T Consensus        86 ~R~~L~~~~~~~~~~~L~Il~~~rkr~~l~~ll~~L~~i~~v~~~~~~l~~ll~~--~-------------dy-------  143 (291)
T PF10475_consen   86 LRRNLKSADENLTKSGLEILRLQRKRQNLKKLLEKLEQIKTVQQTQSRLQELLEE--G-------------DY-------  143 (291)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--C-------------CH-------
Confidence            8888888888877644444444455666777777777777778888888888842  0             00       


Q ss_pred             CCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhhcCHHHHHHHH
Q 009030          187 TFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCL  266 (546)
Q Consensus       187 s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~~~~~~l~~cL  266 (546)
                                ++ +    |+ +..+..++   .....+..-++.+..+++.....+...|++.|......=|.+.=..++
T Consensus       144 ----------~~-A----l~-li~~~~~~---l~~l~~~~c~~~L~~~L~e~~~~i~~~ld~~l~~~~~~Fd~~~Y~~v~  204 (291)
T PF10475_consen  144 ----------PG-A----LD-LIEECQQL---LEELKGYSCVRHLSSQLQETLELIEEQLDSDLSKVCQDFDPDKYSKVQ  204 (291)
T ss_pred             ----------HH-H----HH-HHHHHHHH---HHhcccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence                      00 1    11 11122221   122244556777888888888888888888888776666777888899


Q ss_pred             HHHHHhcChhhHHHHHHHHhh
Q 009030          267 RAYAAIDNTRNAEEIFCNTVV  287 (546)
Q Consensus       267 r~Y~~ld~~~~ae~~~r~~vV  287 (546)
                      .+|..||++..+-+-+....+
T Consensus       205 ~AY~lLgk~~~~~dkl~~~f~  225 (291)
T PF10475_consen  205 EAYQLLGKTQSAMDKLQMHFT  225 (291)
T ss_pred             HHHHHHhhhHHHHHHHHHHHH
Confidence            999999998876655555443

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells

Probab=98.58  E-value=4.7e-05  Score=86.12  Aligned_cols=291  Identities=15%  Similarity=0.198  Sum_probs=169.9

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHH-HH-HHHHHHHhHHHHHHHHH
Q 009030           52 VPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREK-ID-GFRGALEGSLVALQNGL  129 (546)
Q Consensus        52 ~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~-V~-~~r~~v~~~~~~l~~~L  129 (546)
                      -+|+.....|......++.+.-+.||++|.||...-......-..+..+...+..+... +. .+...+.....+++.. 
T Consensus        10 edl~~~I~~L~~~i~~~k~eV~~~I~~~y~df~~~~~~~~~L~~~~~~l~~eI~d~l~~~~~~~i~~~l~~a~~e~~~L-   88 (593)
T PF06248_consen   10 EDLRKSISRLSRRIEELKEEVHSMINKKYSDFSPSLQSAKDLIERSKSLAREINDLLQSEIENEIQPQLRDAAEELQEL-   88 (593)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH-
Confidence            35677788999999999999999999999999987666666666666565555333222 22 2444444444443332 


Q ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhhccCCCCCCCcccCCcccccchhHHHH
Q 009030          130 KQRSEAASAREVL---ELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLE  206 (546)
Q Consensus       130 ~~R~~l~~~k~~L---~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~Le  206 (546)
                        +++++.....+   +.+..+++.+..++..+..                                        . .+.
T Consensus        89 --~~eL~~~~~~l~~L~~L~~i~~~l~~~~~al~~----------------------------------------~-~~~  125 (593)
T PF06248_consen   89 --KRELEENEQLLEVLEQLQEIDELLEEVEEALKE----------------------------------------G-NYL  125 (593)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------------------C-CHH
Confidence              33444444333   3333334433333333321                                        0 133


Q ss_pred             HHHHHHHHHHHHHHh-----cCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhh-----h-----------------cCH
Q 009030          207 RIASEMNRLKFYIAH-----AQNLPFIENMEKRIKSASLLLDASLGHCFVHGLE-----H-----------------QNA  259 (546)
Q Consensus       207 RiA~e~~~L~~~~~~-----~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~-----~-----------------~~~  259 (546)
                      .+|....+++.....     +.+...+..+..++...+..|...|+..+...+.     .                 .+.
T Consensus       126 ~Aa~~L~~~~~~L~~l~~~~~~~~~i~~~Lk~e~~~lr~~L~~~L~~~w~~lv~~~~~~~k~~~~~~~~~~v~l~vs~~~  205 (593)
T PF06248_consen  126 DAADLLEELKSLLDDLKSSKFEELKILKLLKDEYSELRENLQYQLSEEWERLVQWDSPSSKQLSSPESTLKVTLHVSKSE  205 (593)
T ss_pred             HHHHHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcccccccccceEEEEEeecCc
Confidence            344444444443332     2346777888999999999999999999988642     0                 112


Q ss_pred             --HHHHHHHHHHHHhcChhhHHHHHHHHhhHHHHhhhcCCCCCcc----cc---------------CCCcchHHHHHHHH
Q 009030          260 --NVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGPSEA----LA---------------GASGDELESDYEQI  318 (546)
Q Consensus       260 --~~l~~cLr~Y~~ld~~~~ae~~~r~~vV~P~l~~ii~~~~l~~----~~---------------~~s~~~L~~~y~~i  318 (546)
                        ..|..+|.+...+|......+-|.+.++.=.+.-+|..+....    ..               ......-..+|++|
T Consensus       206 ~~~~L~~vl~AL~~lg~L~~~l~~~~~~Ll~~ii~PlI~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~V~~~l  285 (593)
T PF06248_consen  206 SQESLQDVLQALEILGILDYKLKKFSKFLLEHIIKPLISHPSSIVSVEESEDGSVEITLSYEPDSSKDKRPSPKEVFSNL  285 (593)
T ss_pred             ccchHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCcceEEEEeecccccccCCCHHHHHHHH
Confidence              2388999999999999888888877766544444433222100    00               01112346788887


Q ss_pred             HHHHHhhhHHHHHHhhhccCCCccccccccccHHHHHHHHHhcCCccccCCCchHHHHHHHHHHHHHHHHHh
Q 009030          319 KQCVEKDCKFLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEG  390 (546)
Q Consensus       319 l~fv~~~~~~ll~it~~~~~~~~~~dfl~nsvw~ev~~~l~~~l~~iFapG~Pd~F~~nY~~t~~Fl~~lE~  390 (546)
                      +.++..-...++......   ..-+..++..+||++.+.|.++.-.-=-|.+.+.+.. |....+-+..||.
T Consensus       286 ~~vf~fL~~~L~~~~~~~---~~l~~~~g~~i~~~ls~~lI~~~L~~aiP~~~~~l~~-f~~v~~~~~~Fe~  353 (593)
T PF06248_consen  286 LLVFEFLHQHLLSLPSSD---SSLSESFGDHIWPRLSELLISNCLSPAIPTSASELQE-FEEVLESVEEFEE  353 (593)
T ss_pred             HHHHHHHHHHhcccCCch---hHHHHHHHHHHHHHHHHHHHHhhCcCcCCCCHHHHHH-HHHHHHHHHHHHH
Confidence            766655444444221100   0235789999999999998876532233444444333 5555444444443

These include cytoplasmic dynein targeting to Golgi and other membranes, and SNARE-mediated ER-Golgi trafficking [, ]. Dominant-negative ZW10, anti-ZW10 antibody, and ZW10 RNA interference (RNAi) cause Golgi dispersal. ZW10 RNAi also disperse endosomes and lysosomes []. Drosophila kinetochore components Rough deal (Rod) and Zw10 are required for the proper functioning of the metaphase checkpoint in flies []. The eukaryotic spindle assembly checkpoint (SAC) monitors microtubule attachment to kinetochores and prevents anaphase onset until all kinetochores are aligned on the metaphase plate. It is an essential surveillance mechanism that ensures high fidelity chromosome segregation during mitosis. In higher eukaryotes, cytoplasmic dynein is involved in silencing the SAC by removing the checkpoint proteins Mad2 and the Rod-Zw10-Zwilch complex (RZZ) from aligned kinetochores [, , ].; GO: 0007067 mitosis, 0000775 chromosome, centromeric region, 0005634 nucleus

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking

Probab=98.38  E-value=1.2e-05  Score=73.49  Aligned_cols=118  Identities=14%  Similarity=0.283  Sum_probs=95.8

Q ss_pred             CCCCCCCCChHHHHhhccC--------CCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHH
Q 009030           32 NLFLSPNFDSESYISELRT--------FVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAP  103 (546)
Q Consensus        32 ~~F~~~dFdvd~FLs~~rr--------~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~p  103 (546)
                      +.|+.|||||.+|.+++=.        ..++.+-.+-|..=.+.|+++|=++|.++|.+.++--+.+...+..+..|+..
T Consensus         1 e~fl~~dFd~~~fan~ll~~~~~~~~~~ld~~~~l~kL~~~i~eld~~i~~~v~~~~~~LL~q~~~~~~~~~~l~~v~~~   80 (132)
T PF10392_consen    1 EAFLSPDFDPVQFANDLLKSTNNNSDSELDISTPLKKLNFDIQELDKRIRSQVTSNHEDLLSQASSIEELESVLQAVRSS   80 (132)
T ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            5799999999999987755        66666666777777777999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009030          104 LLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTF  149 (546)
Q Consensus       104 L~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~  149 (546)
                      +..+...+..++.+|.+-.+.++....+=+.+.....+|+-...+.
T Consensus        81 v~~L~~s~~RL~~eV~~Py~~~~~~~~~L~rl~~t~~LLR~~~r~l  126 (132)
T PF10392_consen   81 VESLQSSYERLRSEVIEPYEKIQKLTSQLERLHQTSDLLRSVSRFL  126 (132)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999888888765554455555555555433333

Subunit 5 is located in the smaller, B lobe, together with subunits 6-8, and has been shown to bind subunits 1 and 7 [].

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi

Probab=98.20  E-value=7.3e-06  Score=69.04  Aligned_cols=81  Identities=26%  Similarity=0.497  Sum_probs=67.7

Q ss_pred             CCCCCCChHHHHhhccCCCCh---HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHH
Q 009030           34 FLSPNFDSESYISELRTFVPF---ETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREK  110 (546)
Q Consensus        34 F~~~dFdvd~FLs~~rr~~sL---e~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~  110 (546)
                      |.+|+|||+.|+.+.-+..++   ..++..|+.-....+++|=.+|.++|.+||.-+..++.+...+..++.-|..+...
T Consensus         1 ~~~~~fd~~~~~~~~l~~~s~~~i~~~~~~L~~~i~~~~~eLr~~V~~nY~~fI~as~~I~~m~~~~~~l~~~l~~l~~~   80 (87)
T PF08700_consen    1 FDSENFDVDEYFKDLLKNSSIKEIRQLENKLRQEIEEKDEELRKLVYENYRDFIEASDEISSMENDLSELRNLLSELQQS   80 (87)
T ss_pred             CCCCcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            778999999999977666664   45567788888889999999999999999999999999888888888877777766


Q ss_pred             HHHH
Q 009030          111 IDGF  114 (546)
Q Consensus       111 V~~~  114 (546)
                      +..+
T Consensus        81 ~~~l   84 (87)
T PF08700_consen   81 IQSL   84 (87)
T ss_pred             HHHh
Confidence            6544

Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []

Probab=97.65  E-value=0.018  Score=61.96  Aligned_cols=207  Identities=19%  Similarity=0.274  Sum_probs=131.4

Q ss_pred             CCCChHHHHhhcc----CCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHHHH
Q 009030           37 PNFDSESYISELR----TFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKID  112 (546)
Q Consensus        37 ~dFdvd~FLs~~r----r~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~V~  112 (546)
                      |||||.+||.++=    .-..|+++...++.|...|.+++.+.|..- +   +.|   ..+.+.+...+..+.++-.+|.
T Consensus         2 ~dfdpv~~in~lfp~e~SL~~ld~~i~~l~~~i~~ld~eI~~~v~~q-~---~~~---~~~~~~l~~a~~~i~~L~~~i~   74 (383)
T PF04100_consen    2 PDFDPVDYINELFPDEQSLSNLDELIAKLRKEIRELDEEIKELVREQ-S---SSG---QDAEEDLEEAQEAIQELFEKIS   74 (383)
T ss_pred             CCCCHHHHHHHhCCChHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-h---hcc---ccccccHHHHHHHHHHHHHHHH
Confidence            7999999999763    336688999999999999999999988762 1   222   3345566666666667777776


Q ss_pred             HHHHHHHhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhhccCCC
Q 009030          113 GFRGALEGSLVALQNGLKQ-------RSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSA  185 (546)
Q Consensus       113 ~~r~~v~~~~~~l~~~L~~-------R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~  185 (546)
                      .++..-++....|++--+.       |+.|...=..|+.|......+.+|+.++.. ..                     
T Consensus        75 ~ik~kA~~sE~~V~~it~dIk~LD~AKrNLT~SIT~LkrL~MLv~a~~qL~~~~~~-r~---------------------  132 (383)
T PF04100_consen   75 EIKSKAEESEQMVQEITRDIKQLDNAKRNLTQSITTLKRLQMLVTAVEQLKELAKK-RQ---------------------  132 (383)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC---------------------
Confidence            6666666655555443333       444444445778777788888888888752 10                     


Q ss_pred             CCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhh---c----C
Q 009030          186 TTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEH---Q----N  258 (546)
Q Consensus       186 ~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~---~----~  258 (546)
                                 .++. +..|.    .+.+|--+-..-++.|-|.++..++..++..|...+-.-|......   .    .
T Consensus       133 -----------Y~e~-a~~L~----av~~L~~~F~~yksi~~I~~L~~~i~~l~~~L~~qI~~df~~~f~~~~~~~~~~~  196 (383)
T PF04100_consen  133 -----------YKEI-ASLLQ----AVKELLEHFKPYKSIPQIAELSKRIDQLQNELKEQIFEDFEELFGSQGDESPGQS  196 (383)
T ss_pred             -----------HHHH-HHHHH----HHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch
Confidence                       0001 12232    2233322333447899999999999999999888887777776421   1    1


Q ss_pred             HHHHHHHHHHHHHhcChhhHHHHHHHHhhHHHHhhh
Q 009030          259 ANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPLMQKI  294 (546)
Q Consensus       259 ~~~l~~cLr~Y~~ld~~~~ae~~~r~~vV~P~l~~i  294 (546)
                      ...+..+=.+..+||..      +|+.+|.-|+...
T Consensus       197 ~~~l~~aC~vvd~L~~~------~r~~li~wf~~~q  226 (383)
T PF04100_consen  197 SQQLSDACLVVDALGPD------VREELIDWFCNKQ  226 (383)
T ss_pred             HhHHHHHHHHHHHcCch------HHHHHHHHHHHHH
Confidence            22333322244455542      6677776666544

>KOG2346 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.25  E-value=0.0017  Score=69.93  Aligned_cols=100  Identities=17%  Similarity=0.389  Sum_probs=78.5

Q ss_pred             CCCCCCCCCCccCcCCCCCCCCChHHHHhhccCCCChHHHHHH---HHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHH
Q 009030           18 FSDPADSHPLWFKSNLFLSPNFDSESYISELRTFVPFETLRSE---LQAHLSSLNHELIDLINRDYADFVNLSTKLVDVD   94 (546)
Q Consensus        18 ~~~p~~~~~l~F~~~~F~~~dFdvd~FLs~~rr~~sLe~Lr~d---Lr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d   94 (546)
                      .+.|.+|.|  .+..+...++|||+.|+-+++|--||+.|-+.   .-.--+.|.+-|-.||=+||..|++--..++-|.
T Consensus        14 ~g~pagpdp--lsptDlngahFDpEvyldkL~REcpLaqLidsetdMV~qIRaLDSDmqtLVYENYNKFisATdTirkmk   91 (636)
T KOG2346|consen   14 LGLPAGPDP--LSPTDLNGAHFDPEVYLDKLPRECPLAQLIDSETDMVQQIRALDSDMQTLVYENYNKFISATDTIRKMK   91 (636)
T ss_pred             cCCCCCCCC--CCccccCCCCCCHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHhchHHHHHHHhhcchhhhcchHHHHHH
Confidence            345555444  46678899999999999999999999999764   4444566888999999999999999888888888


Q ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHH
Q 009030           95 AAVVRMRAPLLELREKIDGFRGALE  119 (546)
Q Consensus        95 ~~i~~l~~pL~~lr~~V~~~r~~v~  119 (546)
                      .-+.+|-.++.++-+.+..+.+...
T Consensus        92 ~~f~~me~eMd~L~~~ms~i~~~s~  116 (636)
T KOG2346|consen   92 SNFFGMEQEMDGLEEVMSSIQSKSD  116 (636)
T ss_pred             hhhhhhcchhhhHHHHHHHHhhhhc
Confidence            8888888888777666555444443

>KOG2211 consensus Predicted Golgi transport complex 1 protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=96.97  E-value=0.3  Score=54.95  Aligned_cols=216  Identities=13%  Similarity=0.125  Sum_probs=130.8

Q ss_pred             CCCCCCCCChHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHHH
Q 009030           32 NLFLSPNFDSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKI  111 (546)
Q Consensus        32 ~~F~~~dFdvd~FLs~~rr~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~V  111 (546)
                      +.|.+..|+++.|-+.--.+..+.+-.+||..-+..++.+|=.=|=+--.+-+--.+.+--.|..++.++..+..++++|
T Consensus        51 s~fln~~fSv~~~tSas~~s~~ia~q~~~L~q~lr~ldrqLh~qv~~Rh~allaQat~~~~~d~~l~sl~~~v~~lqs~i  130 (797)
T KOG2211|consen   51 SSFLNTLFSVQMMTSASKESNRIATQCDDLTQKLRELDRQLHAQVLKRHMALLAQATEELFEDLELRSLLVKVAELQSEI  130 (797)
T ss_pred             cccccchhhhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            78999999999988743444444444444444444455555544445556666666777778888888888888888888


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhhccCCCCCCCcc
Q 009030          112 DGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPV  191 (546)
Q Consensus       112 ~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~~s~~~~  191 (546)
                      ..++..+.+..+.+..+-.+-..+..+..+|..    .-+..+|-+-|..+.+.+                         
T Consensus       131 ~riknd~~epyk~i~~kt~vl~rLhva~~lLrr----sgr~l~LskkL~~l~~~~-------------------------  181 (797)
T KOG2211|consen  131 KRIKNDNKEPYKIIWLKTMVLTRLHVAENLLRR----SGRALELSKKLASLNSSM-------------------------  181 (797)
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhccC-------------------------
Confidence            888888887777766654444555555555543    222223333333222211                         


Q ss_pred             cCCcccccchhHHHHHHHHHHHHHHHHHHh--cCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhhcCHHHHHHHHHHH
Q 009030          192 ENGTNVRETQSMLLERIASEMNRLKFYIAH--AQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAY  269 (546)
Q Consensus       192 ~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~--~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~~~~~~l~~cLr~Y  269 (546)
                                .+.+.|+|.-.|.|-.+..-  -.+..++++--.-+..+...+...--..+..+++++|+..+..-|.++
T Consensus       182 ----------~~d~traaq~lneLd~l~e~~dlsgIdvId~el~fv~~s~~evrN~a~~vLe~glq~~ne~qvgtglqvf  251 (797)
T KOG2211|consen  182 ----------VVDATRAAQTLNELDSLLEVLDLSGIDVIDKELMFVSNSSPEVRNKALPVLEAGLQSHNEQQVGTGLQVF  251 (797)
T ss_pred             ----------CHhHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhcHHHHhhHHHHH
Confidence                      11267777777777655432  133444444222333333444444445667788888888888889999


Q ss_pred             HHhcChhhHHHHHHHHh
Q 009030          270 AAIDNTRNAEEIFCNTV  286 (546)
Q Consensus       270 ~~ld~~~~ae~~~r~~v  286 (546)
                      ..+|....-...++...
T Consensus       252 ynfgtLekt~d~lv~~y  268 (797)
T KOG2211|consen  252 YNFGTLEKTADLLVSRY  268 (797)
T ss_pred             HhcchHHHHHHHHHHhc
Confidence            98886554444444443

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane

Probab=96.86  E-value=0.03  Score=51.81  Aligned_cols=94  Identities=15%  Similarity=0.223  Sum_probs=72.6

Q ss_pred             CCCCCCChHHHHhhcc--CCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHHH
Q 009030           34 FLSPNFDSESYISELR--TFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKI  111 (546)
Q Consensus        34 F~~~dFdvd~FLs~~r--r~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~V  111 (546)
                      .+.++|+|-+..-++-  ..+.++.-..+++...+.+...|=++||+.|++|-+==.+-..+-..|..-+.-+.++|+.+
T Consensus        16 ~~~~~~~pv~~al~~ld~ss~g~~~~~~~f~~~~~~~~~~L~~vV~eh~q~Fn~sI~sy~~i~~~i~~sq~~i~~lK~~L   95 (142)
T PF04048_consen   16 MLTDDFNPVELALSLLDDSSVGRAHRYQEFEELKKRIEKALQEVVNEHYQGFNSSIGSYSQILSSISESQERIRELKESL   95 (142)
T ss_pred             HhcCCCcHHHHHHHhcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568999998887654  44458899999999999999999999999999998765566666666666666777777777


Q ss_pred             HHHHHHHHhHHHHHHH
Q 009030          112 DGFRGALEGSLVALQN  127 (546)
Q Consensus       112 ~~~r~~v~~~~~~l~~  127 (546)
                      .+.+..+.....++++
T Consensus        96 ~~ak~~L~~~~~eL~~  111 (142)
T PF04048_consen   96 QEAKSLLGCRREELKE  111 (142)
T ss_pred             HHHHHHHhcCCHHHHH
Confidence            7777777666666554

The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0015031 protein transport, 0000145 exocyst

>KOG4182 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.60  E-value=0.46  Score=51.55  Aligned_cols=220  Identities=13%  Similarity=0.164  Sum_probs=101.0

Q ss_pred             CcCCCCCCCCChHHHHh-hccCCCChH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcc---cHHHHHHh
Q 009030           30 KSNLFLSPNFDSESYIS-ELRTFVPFE------TLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLV---DVDAAVVR   99 (546)
Q Consensus        30 ~~~~F~~~dFdvd~FLs-~~rr~~sLe------~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~---G~d~~i~~   99 (546)
                      |-..|..+.||+.+++. +|..+++=+      .+-.-+|+|-..|+-.. +-||.-.++=  =|..|-   ...+....
T Consensus         2 Dlg~fSdekFda~~WiNancka~h~ed~rddsea~e~~i~dle~KLQia~-eeigaalEEq--Sggal~rmPRaakd~~~   78 (828)
T KOG4182|consen    2 DLGAFSDEKFDAAEWINANCKAFHEEDGRDDSEAAEAFIRDLEAKLQIAI-EEIGAALEEQ--SGGALARMPRAAKDSAA   78 (828)
T ss_pred             CCccccccccCHHHHHhhhhhhcccccCcccHHHHHHHHHHHHHHHHHHH-HHHhHHHHHh--ccchHhhCchhhhHHHH
Confidence            34578899999999997 444444432      25555555555544332 2233322220  011111   12223444


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhh
Q 009030          100 MRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEER  179 (546)
Q Consensus       100 l~~pL~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~  179 (546)
                      +|.+.-.++++|.+++-++..+..+-.+++..-..+...|..++.....-+--..+-+|+..               -++
T Consensus        79 Lq~Da~~Lq~kma~il~el~~aegesadCiAaLaRldn~kQkleaA~esLQdaaGl~nL~a~---------------lED  143 (828)
T KOG4182|consen   79 LQADAHRLQEKMAAILLELAAAEGESADCIAALARLDNKKQKLEAAKESLQDAAGLGNLLAE---------------LED  143 (828)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHhccHHHHHHHHHHHHHhhccHHHHHHH---------------HHH
Confidence            55555566666666665555555544555544333333333333211000000011222211               122


Q ss_pred             hccCCCCCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHH----HHHHHHhHHHHhhhh
Q 009030          180 KSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASL----LLDASLGHCFVHGLE  255 (546)
Q Consensus       180 ~~~~~~~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~----~L~~~L~~~~~~~l~  255 (546)
                      ++..+                   .|.++|.-...|+.-......+|=..+.++.++..++    +.+-.|-.||.++  
T Consensus       144 ~Fa~g-------------------DL~~aadkLaalqkcL~A~~elaefAe~qkQlE~~edRLEAlaqPrltda~a~~--  202 (828)
T KOG4182|consen  144 GFARG-------------------DLKGAADKLAALQKCLHAQEELAEFAERQKQLEDFEDRLEALAQPRLTDAFAEG--  202 (828)
T ss_pred             HhhcC-------------------CchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHcCchHHHHHHcc--
Confidence            22111                   1455555444444322111223322223444443333    3344455555544  


Q ss_pred             hcCHHHHHHHHHHHHHhcChhhHHHHHHHHhhHHH
Q 009030          256 HQNANVIYNCLRAYAAIDNTRNAEEIFCNTVVAPL  290 (546)
Q Consensus       256 ~~~~~~l~~cLr~Y~~ld~~~~ae~~~r~~vV~P~  290 (546)
                        +.+.--+.-.++..||+....|--+|.+-.+|+
T Consensus       203 --ktd~AQd~r~I~irIgRfkqLelqY~~Vq~k~i  235 (828)
T KOG4182|consen  203 --KTDQAQDFRQIFIRIGRFKQLELQYRAVQKKFI  235 (828)
T ss_pred             --ChHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence              334444555678899999988888777666554

>PF15469 Sec5: Exocyst complex component Sec5

Probab=96.02  E-value=0.97  Score=43.26  Aligned_cols=165  Identities=12%  Similarity=0.188  Sum_probs=103.1

Q ss_pred             HHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009030           70 HELIDLINRDYADFVNLSTKLVDVDAAVVRMRA------PLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLE  143 (546)
Q Consensus        70 ~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~------pL~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~  143 (546)
                      ++|-.||.+||..||+--..|..+-+.+.....      ++..+.+.+..+..........+-+.=++-..++....+|+
T Consensus         2 ~~lk~LV~~Nf~~Fv~~k~tid~i~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~pll~~~~k~~~l~~~l~~l~   81 (182)
T PF15469_consen    2 EDLKSLVKENFDKFVSCKDTIDDIYEEFRNMKTEAQQDSGTEKLEESLNEASSKANSVFKPLLERREKADKLRNALEFLQ   81 (182)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence            578899999999999999999988888876664      57888888887777777766665543333344444444554


Q ss_pred             HHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhhccCCCCCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcC
Q 009030          144 LLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQ  223 (546)
Q Consensus       144 lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~  223 (546)
                      -.--+.+.=.+|++.+..                                        + .-+.+..+|.+.+.+.....
T Consensus        82 r~~flF~LP~~L~~~i~~----------------------------------------~-dy~~~i~dY~kak~l~~~~~  120 (182)
T PF15469_consen   82 RNRFLFNLPSNLRECIKK----------------------------------------G-DYDQAINDYKKAKSLFEKYK  120 (182)
T ss_pred             HHHHHHHhHHHHHHHHHc----------------------------------------C-cHHHHHHHHHHHHHHHHHhh
Confidence            444444444445444421                                        0 14456778888877766654


Q ss_pred             -CCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhhcCHHHHHHHHHHHHHhcChhh
Q 009030          224 -NLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRN  277 (546)
Q Consensus       224 -~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~~~~~~l~~cLr~Y~~ld~~~~  277 (546)
                       ..+.+.++-..++.+-..+...|-+-|.+.-  .+.+....+.+..-.||-..+
T Consensus       121 ~~~~vf~~v~~eve~ii~~~r~~l~~~L~~~~--~s~~~~~~~i~~Ll~L~~~~d  173 (182)
T PF15469_consen  121 QQVPVFQKVWSEVEKIIEEFREKLWEKLLSPP--SSQEEFLKLIRKLLELNVEED  173 (182)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHhCCCCCC
Confidence             6677777666666665555555544444432  234445555555555555443

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []

Probab=95.35  E-value=4.2  Score=42.94  Aligned_cols=92  Identities=22%  Similarity=0.315  Sum_probs=64.6

Q ss_pred             CChHHHHH---HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 009030           52 VPFETLRS---ELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNG  128 (546)
Q Consensus        52 ~sLe~Lr~---dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~V~~~r~~v~~~~~~l~~~  128 (546)
                      .+++.|.+   .|.+-.+.+..++-+|-+++|.-||.-+..+.+....+..+..-+..+..++.+..+..+......+  
T Consensus         7 ~~l~~L~~Ep~~L~~~~~~l~~ql~~La~~~y~~fi~~~~~~~~i~~~~~~~~~~l~~L~~~l~~L~~~~~~f~~~~~--   84 (338)
T PF04124_consen    7 LSLESLFSEPQSLSEEIASLDAQLQSLAFRNYKTFIDNAECSSDIRQELSSLSDSLDSLLDSLPELDEACQRFSSKAQ--   84 (338)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            45566654   4667778899999999999999999999999888888888877777777777666655554444333  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 009030          129 LKQRSEAASAREVLELLLDTFH  150 (546)
Q Consensus       129 L~~R~~l~~~k~~L~lll~~~~  150 (546)
                           ++.+.|+....++..++
T Consensus        85 -----~~~~~r~~~~~~l~~~~  101 (338)
T PF04124_consen   85 -----KISEERKKASLLLENHD  101 (338)
T ss_pred             -----HHHHHHHHHHHHHHHHH
Confidence                 33344444555444444

>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.00  E-value=8.5  Score=45.13  Aligned_cols=130  Identities=18%  Similarity=0.258  Sum_probs=103.9

Q ss_pred             cCCCCCCCC---ChHHHHhhcc----------------CCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcc
Q 009030           31 SNLFLSPNF---DSESYISELR----------------TFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLV   91 (546)
Q Consensus        31 ~~~F~~~dF---dvd~FLs~~r----------------r~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~   91 (546)
                      ++-|.+|+|   ||.+|=+=+.                +...-..||.-|..|+..+.--|+.=|-.--++|..-=+++.
T Consensus       199 Psiffk~dF~Lddp~TF~~V~~~id~t~~~~a~~~~~~~~~~~~~LQekLs~yLDvVE~~La~eIs~~SdsFfha~~~~~  278 (951)
T KOG2115|consen  199 PSIFFKSDFQLDDPATFHSVLPAIDLTLTKTAMNRQAERLEANSALQEKLSHYLDVVELHLAQEISKRSDSFFHAMTSLH  278 (951)
T ss_pred             cchhcCCcccCCCcchHhhhccccccchhcccccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            577888888   6777755332                445677899999999999999999999999999999999999


Q ss_pred             cHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009030           92 DVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIK  160 (546)
Q Consensus        92 G~d~~i~~l~~pL~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~  160 (546)
                      ++.+.+.+=-.-+..+|+.+..+-...-.....+.+.-..|+....-++.|+++..+++.-.++.-++.
T Consensus       279 ~Lq~~~~d~~~~vk~Lre~i~~vd~~~~~~s~~Ile~~~~r~n~~kL~~kL~~i~~V~~~q~~vq~ll~  347 (951)
T KOG2115|consen  279 NLQKELRDTMSEVKELRENIKEVDAENVRKSIKILELALTRKNVEKLLQKLRLIATVHQAQSTVQLLLS  347 (951)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence            998887776677778888888777776666666666666677777777888888888887778877774

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.99  E-value=8.7  Score=44.00  Aligned_cols=385  Identities=16%  Similarity=0.203  Sum_probs=207.9

Q ss_pred             CCCCCCCCChHHHHhhcc----CCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHH
Q 009030           32 NLFLSPNFDSESYISELR----TFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLEL  107 (546)
Q Consensus        32 ~~F~~~dFdvd~FLs~~r----r~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~l  107 (546)
                      +.|-+|+|+--+|++++=    ....+|.|++-++.-...+.++|...|-..       +.....+.+.+.+.+..+..+
T Consensus        12 q~~~t~~f~~v~~in~lfp~eqSL~~id~li~ki~~eir~~d~~l~~~Vr~q-------~N~g~~~~e~l~da~~ai~eL   84 (793)
T KOG2180|consen   12 QMIPTPEFNFVEYINELFPAEQSLTNIDSLIQKIQGEIRRVDKNLLAVVRTQ-------ENSGTRGKENLADAQAAIEEL   84 (793)
T ss_pred             HhcCCcchhHHHHHHHhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------ccccchhhhhHHHHHHHHHHH
Confidence            456669999999999763    456667777755555555666666655432       334445666777777777777


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCcccchhhhh
Q 009030          108 REKIDGFRGALEGSLVALQNGLKQ-------RSEAASAREVLELLLDTFHVVSKVEKLIKELPSLPADGSDFDVNLEERK  180 (546)
Q Consensus       108 r~~V~~~r~~v~~~~~~l~~~L~~-------R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~~p~~~~~~~~~~~~~~  180 (546)
                      -.++.++++.-++....|++--+.       |+.+...=..|+.|-.....|++++.|+.. .+                
T Consensus        85 ~~~i~eiks~ae~Te~~V~eiTrdIKqLD~AKkNLTtSiT~L~~L~MLv~~vesL~~l~~k-r~----------------  147 (793)
T KOG2180|consen   85 FQKIQEIKSVAESTEAMVQEITRDIKQLDFAKKNLTTSITTLHRLHMLVTGVESLNALLSK-RS----------------  147 (793)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc----------------
Confidence            777777776666555555543333       344444445666665566667777777642 00                


Q ss_pred             ccCCCCCCCcccCCcccccchhHHHHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhhcCH-
Q 009030          181 SMSSATTFQPVENGTNVRETQSMLLERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNA-  259 (546)
Q Consensus       181 ~~~~~~s~~~~~~~~~~~~~~~~~LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~~~~-  259 (546)
                                      .++. ...|+-    +++|--|-..-++.|=+.++..+|++++..|.+.+-.-|.++..+++. 
T Consensus       148 ----------------y~e~-a~~lqa----i~~ll~~F~~Yk~v~~I~~Ls~si~~~k~~l~~qi~~df~~~F~~~~~~  206 (793)
T KOG2180|consen  148 ----------------YGEA-ASPLQA----ILQLLNHFIAYKSVDEIANLSESIDKLKKSLLSQIFQDFKAAFSGGETH  206 (793)
T ss_pred             ----------------HHHH-HhHHHH----HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                            1111 112332    222222333457899999999999999999999888878776653322 


Q ss_pred             --HHHHHHHH-HHHHhcChhhHHHHHHHHhhHHHHhhhcCCCC---CccccCCCcchHHHHHHHHHHHHHh---hhHHHH
Q 009030          260 --NVIYNCLR-AYAAIDNTRNAEEIFCNTVVAPLMQKIIPHGP---SEALAGASGDELESDYEQIKQCVEK---DCKFLL  330 (546)
Q Consensus       260 --~~l~~cLr-~Y~~ld~~~~ae~~~r~~vV~P~l~~ii~~~~---l~~~~~~s~~~L~~~y~~il~fv~~---~~~~ll  330 (546)
                        ....+.|. ++..+|.   .+--+|+.+|+-|+++-+.+=-   -+....++.+.+..-|.-+...+..   ..+++.
T Consensus       207 ~~~~~l~~l~daC~v~d~---lepsvreelIkwf~~qqL~ey~~IF~en~E~a~LDkidrRY~wfKr~L~~fe~k~~~iF  283 (793)
T KOG2180|consen  207 EEALLLQKLSDACLVVDA---LEPSVREELIKWFCSQQLEEYEQIFRENEEAASLDKLDRRYAWFKRLLRDFEEKWKPIF  283 (793)
T ss_pred             CCccHHHHHHHHHHHHHH---hCCccHHHHHHHHHHHHHHHHHHHHhccHhhhhhhhHHHHHHHHHHHHHHHHHhccccC
Confidence              11111111 1112221   1223567788888766432200   0011145667777778776655422   111111


Q ss_pred             HHhhhccCCCccccccccccHHHHHHHHHhcCCccccCCCchHHHHHHHHHHHHHHHHHhhCC--------CHHHHH-HH
Q 009030          331 DISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYKSSLDFLAYLEGYCP--------SRSAVA-KF  401 (546)
Q Consensus       331 ~it~~~~~~~~~~dfl~nsvw~ev~~~l~~~l~~iFapG~Pd~F~~nY~~t~~Fl~~lE~~c~--------S~~~v~-~l  401 (546)
                      ....+.+..+. .-|  +-+=......|++++   +.=-+-++|.---..|.+|=..|+...+        ...+.. .=
T Consensus       284 P~dW~v~~RLt-~eF--c~~Tr~~L~~Il~~~---~~~~~v~lll~Alq~TleFE~~L~kRF~g~~~~~~~~~ns~~~~k  357 (793)
T KOG2180|consen  284 PADWHVAYRLT-IEF--CHQTRKQLESILKRR---KKEPDVKLLLFALQSTLEFEKFLDKRFSGGTLTGKPEKNSQFEPK  357 (793)
T ss_pred             CcccchhHHHH-HHH--HHHHHHHHHHHHHHh---hhCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccc
Confidence            11111110000 000  011112223344433   2223446788888888999888887542        111110 00


Q ss_pred             hhchhHHHHHHhh--ccchhHHHHHHHHHHhHHHhhcccccccccCCCCCCCCCcccchhhHHHHHHHHhhccc
Q 009030          402 RAEAIYVEFMKQW--NVGVYFSLRFQEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWR  473 (546)
Q Consensus       402 R~~~~y~~f~~rW--nLpVYFqLRfqEIa~~lE~aL~~~~~~~~~~~~~~~~~~~~f~l~~s~~l~~~l~~cWs  473 (546)
                      -..+-+....+-+  .|-+|+..-=|++...||.-.+.+.....+   ....+...-.++.+.-++.+.+.|-.
T Consensus       358 ~~~~f~~~isScFEPhLtlyI~~qek~l~ellek~v~e~~~~~~p---~~~~~~~s~vlpSsadlF~~Ykkclt  428 (793)
T KOG2180|consen  358 ERFNFEGAISSCFEPHLTLYIESQEKELSELLEKFVSEEKWDGEP---KSNTDEESLVLPSSADLFVAYKKCLT  428 (793)
T ss_pred             cccchhhHHHHhcccchhhhhhHHHHHHHHHHHHHHhhhccCCCC---CCCcccccccCccHHHHHHHHHHHHH
Confidence            0001122222222  478999998899999999888744332111   01122335677888888888888876

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []

Probab=93.06  E-value=22  Score=41.47  Aligned_cols=179  Identities=11%  Similarity=0.161  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcchHhHHHHHHHHHHHHHHHHhHHHHhhhhhcCHHHHHHHHHHHHHhcChhhHHHHHHH
Q 009030          205 LERIASEMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCN  284 (546)
Q Consensus       205 LeRiA~e~~~L~~~~~~~~~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~~~~~~~l~~cLr~Y~~ld~~~~ae~~~r~  284 (546)
                      ..+.|.-..+|..+.......|-..+...+|+.....+-.+|=..|..+.+.+|...+.+|-++...++....+.+.|-.
T Consensus        74 ~~~~A~il~~L~~ls~~~~~~~~~~~~~~~I~~~~e~fE~~LL~eFe~ay~~~d~~~M~~~A~vL~~fngg~~~i~~fi~  153 (710)
T PF07393_consen   74 PEEAAKILRNLLRLSKELSDIPGFEEARENIEKYCEIFENALLREFEIAYREGDYERMKEFAKVLLEFNGGSSCIDFFIN  153 (710)
T ss_pred             hHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence            44566666777766655547777788899999999999888888888888888999999999999999998888777765


Q ss_pred             Hh---h-HHHHhh--hcC----CCCC---ccccCCCcchHHHHHHHHHHHHHhhhHHHHHHhhhccCCCccc-----ccc
Q 009030          285 TV---V-APLMQK--IIP----HGPS---EALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVF-----DFL  346 (546)
Q Consensus       285 ~v---V-~P~l~~--ii~----~~~l---~~~~~~s~~~L~~~y~~il~fv~~~~~~ll~it~~~~~~~~~~-----dfl  346 (546)
                      .-   . ...+..  .+.    +..+   +.........|..+|+.|...+..+...+-.+=   .+..+..     .++
T Consensus       154 k~~~f~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~l~~~~~~i~~~i~~e~~iI~~VF---p~~~~Vm~~fiervf  230 (710)
T PF07393_consen  154 KHEFFIDEDQLDESNGFEDEEIWEKLSDPDSHPPINEESLDAFFEDIRDVINEESKIIDRVF---PNPEPVMQKFIERVF  230 (710)
T ss_pred             hChhhhhhhhhccccccchhHHHHhccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHC---CCcHHHHHHHHHHHH
Confidence            21   1 111100  000    0000   001122335789999999999988877665553   1111111     122


Q ss_pred             ccccHHHHHHHHHhcCCccccCCCch----HHHHHHHHHHHHHHHHHhh
Q 009030          347 ANSILKEVLSAIQKGKPGAFSPGRPT----QFLRNYKSSLDFLAYLEGY  391 (546)
Q Consensus       347 ~nsvw~ev~~~l~~~l~~iFapG~Pd----~F~~nY~~t~~Fl~~lE~~  391 (546)
                      .+.|-+.|...|.....     ..+.    .+|.-|..|.+|++.|...
T Consensus       231 ~~~I~~~i~~lL~~a~~-----~s~~~YLr~l~~~y~~t~~lv~~L~~~  274 (710)
T PF07393_consen  231 EQVIQEYIESLLEEASS-----ISTLAYLRTLHGLYSQTKKLVDDLKEF  274 (710)
T ss_pred             HHHHHHHHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            23333333333332221     1444    4456688999999999987

; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=83.13  E-value=4.2  Score=45.26  Aligned_cols=124  Identities=19%  Similarity=0.336  Sum_probs=82.4

Q ss_pred             ccCcCCCCCC--CC-ChHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHH
Q 009030           28 WFKSNLFLSP--NF-DSESYISELRTFVPFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPL  104 (546)
Q Consensus        28 ~F~~~~F~~~--dF-dvd~FLs~~rr~~sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL  104 (546)
                      -||.+.|+..  +| +-++.=.++|-|  |..|+..+-+   .+|.---|-||= -+..|+|-.+|+.+..-++++|..+
T Consensus        32 dFdve~f~s~~R~~v~letLrddLrly--lksl~~aMie---LIN~DYADFVnL-StnLVgld~aln~i~qpL~qlreei  105 (705)
T KOG2307|consen   32 DFDVERFMSLARQKVDLETLRDDLRLY--LKSLQNAMIE---LINDDYADFVNL-STNLVGLDDALNKIEQPLNQLREEI  105 (705)
T ss_pred             cCCHHHHHHHHhccCCHHHHHHHHHHH--HHHHHHHHHH---HHhhhHHHHHhh-hhhhccHHHHHHHHHhHHHHHHHHH
Confidence            3555555543  33 223332333322  3444544433   355666666663 3568999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 009030          105 LELREKIDGFRGALEGSLVALQNGLKQRSEAASAREVLELLLDTFHVVSKVEKLIKELPS  164 (546)
Q Consensus       105 ~~lr~~V~~~r~~v~~~~~~l~~~L~~R~~l~~~k~~L~lll~~~~~v~klE~LL~~l~~  164 (546)
                      .++|+-|.+....+++.+.+..+   -|+..+.-+.+..    +...|+||+++|...++
T Consensus       106 ~s~rgsV~ea~~alr~q~se~~~---~Re~k~~lldl~~----v~~~ieKL~k~L~s~ps  158 (705)
T KOG2307|consen  106 KSTRGSVGEAERALRQQCSELCS---NREKKIELLDLIY----VLVAIEKLSKMLLSPPS  158 (705)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH----HHHHHHHHHHHhcCCcc
Confidence            99999998877777766666554   4555566666666    46788899999876665

>smart00762 Cog4 COG4 transport protein

Probab=81.35  E-value=40  Score=35.45  Aligned_cols=51  Identities=12%  Similarity=0.209  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHhHHHHhhhhhcCHHHHHHHHHHHHHhcChhhHHHHHHHHh
Q 009030          236 KSASLLLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFCNTV  286 (546)
Q Consensus       236 ~~i~~~L~~~L~~~~~~~l~~~~~~~l~~cLr~Y~~ld~~~~ae~~~r~~v  286 (546)
                      +.++..|..-+.+-|.++.+.+|...+.++.++|-.||...++.+++-+-+
T Consensus         2 ~~~~~~L~~~~~~~F~~Av~~~D~~~i~rffkLFpllg~~eeGL~~Y~~yi   52 (324)
T smart00762        2 DEARETLTELFKERFDEAVKAQDVPELTRFFKLFPLIGMEEEGLELYSKYI   52 (324)
T ss_pred             hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHhccccCChHhhHHHHHHHH
Confidence            456788888899999999999999999999999999999999999887655

This region is found in yeast oligomeric golgi complex component 4 which is involved in ER to Golgi and intra Golgi transport.

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]

Probab=80.67  E-value=1.2e+02  Score=35.48  Aligned_cols=109  Identities=18%  Similarity=0.281  Sum_probs=74.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 009030           53 PFETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLLELREKIDGFRGALEGSLVALQNGLKQR  132 (546)
Q Consensus        53 sLe~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d~~i~~l~~pL~~lr~~V~~~r~~v~~~~~~l~~~L~~R  132 (546)
                      ..+.+-..|...-..=..|+-++=|..|+||+.==+.|.++...+..++..+..+..++.++-.++-...+++-++=...
T Consensus        45 ~~~~~~e~Le~~ir~~d~EIE~lcn~hyQdFidsIdEL~~Vr~daq~Lks~vsd~N~rLQ~~g~eLiv~~e~lv~~r~~~  124 (800)
T KOG2176|consen   45 QHKPVMEKLENRIRNHDKEIEKLCNFHYQDFIDSIDELLKVRGDAQKLKSQVSDTNRRLQESGKELIVKKEDLVRCRTQS  124 (800)
T ss_pred             CcchHHHHHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45556666777777777888899999999999866555555555555555555555555554444444444444433344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009030          133 SEAASAREVLELLLDTFHVVSKVEKLIKE  161 (546)
Q Consensus       133 ~~l~~~k~~L~lll~~~~~v~klE~LL~~  161 (546)
                      +.|.++=.++.+++.+-+.++|+..++.+
T Consensus       125 rnit~ai~~l~~Cl~vLEl~sK~~e~~s~  153 (800)
T KOG2176|consen  125 RNITEAIELLTLCLPVLELYSKLQEQMSE  153 (800)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56777777889999999999999888753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	546
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 1e-09
 Identities = 81/568 (14%), Positives = 151/568 (26%), Gaps = 167/568 (29%)

Query: 28  WFKSNL---FLSPNFDSESYISEL-------RTFVPFETLRSE----LQAHLSSLNHE-- 71
           +  S +      P+  +  YI +        + F  +   R +    L+  L  L     
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 72  -------------LIDLINRDYA---DFVN----LSTKLVDVDAAVVRMRAPLLELREKI 111
                        +   +   Y            L+ K  +    V+ M   L +L  +I
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM---LQKLLYQI 209

Query: 112 DGFRGALEGSLVALQNGLKQRSEAASAR-----------EVLELLLD---------TFHV 151
           D    +           +K R  +  A              L L+L           F++
Sbjct: 210 DPNWTSRSDHSSN----IKLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAWNAFNL 264

Query: 152 VSKVEKLIKELPSLPADGSDFD-VNLEERKSMSSATTFQPVENGTNVRETQSMLLERIAS 210
             K+  L+             D ++      +S               E +S+L      
Sbjct: 265 SCKI--LL-----TTRFKQVTDFLSAATTTHISL----DHHSMTLTPDEVKSLL------ 307

Query: 211 EMNRLKFYIAHAQNLPFIENMEKRIKSASLLLDASLGHCFVHGLEH-QNANVIYNCLRAY 269
               LK+     Q+LP      + + + +    + +      GL    N    +     +
Sbjct: 308 ----LKYLDCRPQDLP------REVLTTNPRRLSIIAESIRDGLATWDN----WK----H 349

Query: 270 AAIDNTRNAEEIFCNTVVAPLMQK------IIPHG---PSEALAGASGDELESDYEQI-- 318
              D      E   N +     +K      + P     P+  L+    D ++SD   +  
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN 409

Query: 319 ----KQCVEKDCK----------FLLDISSAENSGLHVFDFLANSILKEVLSAIQKGKPG 364
                  VEK  K            L +       LH       SI+ +  +  +     
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH------RSIV-DHYNIPKTFDSD 462

Query: 365 AFSPGRPTQFLRNYKSSLDFLAYLEGYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFSLRF 424
              P     +L  Y     F +++ G+      +           F       V+   RF
Sbjct: 463 DLIP----PYLDQY-----FYSHI-GH-----HLKNIEHPERMTLFRM-----VFLDFRF 502

Query: 425 QEIAGALDSALTAASLAPVQNSNSNQGNSQALTLKQSVTLLDSMKSCWRQDV--FLLPCS 482
                 L+  +   S A   + +      Q    K  +   D         +  FL    
Sbjct: 503 ------LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556

Query: 483 DKFLRLSLQLLSRYSNWLSSGLAARSSG 510
           +  +       S+Y++ L   L A    
Sbjct: 557 ENLIC------SKYTDLLRIALMAEDEA 578

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 49/338 (14%), Positives = 100/338 (29%), Gaps = 80/338 (23%)

Query: 242 LDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEE----IFCNTVVAPLMQK---- 293
           +D   G       ++Q  +++     A+    + ++ ++    I     +  ++      
Sbjct: 7   MDFETGE-----HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 294 --------IIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDISSAENSGLHVFDF 345
                    +     E +     + L  +Y+ +   ++ + +     S      +   D 
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR---QPSMMTRMYIEQRDR 118

Query: 346 LANSI----------------LKEVLSAIQK-------GKPGAFSPGRPT---QFLRNYK 379
           L N                  L++ L  ++        G  G+   G+         +YK
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS---GKTWVALDVCLSYK 175

Query: 380 --SSLDF-LAYLE-GYCPSRSAVAKFRAEAIYVEFMKQWNVGVYFS----LRFQEIAGAL 431
               +DF + +L    C S   V +   + +  +    W      S    LR   I   L
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLE-MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 432 DSALTAAS-------LAPVQNSNSNQ---GNSQAL--TLKQSVTLLDSMKSCWRQDVFLL 479
              L +         L  VQN+ +      + + L  T  + VT  D + +     + L 
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT--DFLSAATTTHISLD 292

Query: 480 PCSDKF-LRLSLQLLSRYSNWLSSGLAARSSGHASFNP 516
             S          LL +Y +     L          NP
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT---NP 327

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	546
2jqq_A	204	Conserved oligomeric golgi complex subunit 2; prot	96.65

>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}

Probab=96.65  E-value=0.082  Score=49.42  Aligned_cols=169  Identities=14%  Similarity=0.210  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHH-H---HHHhhhHHHHHHHHHHHH-HHHHHHhHHHHHHHHH
Q 009030           55 ETLRSELQAHLSSLNHELIDLINRDYADFVNLSTKLVDVD-A---AVVRMRAPLLELREKIDG-FRGALEGSLVALQNGL  129 (546)
Q Consensus        55 e~Lr~dLr~y~~~L~~eLveLIN~DY~DFV~Lss~L~G~d-~---~i~~l~~pL~~lr~~V~~-~r~~v~~~~~~l~~~L  129 (546)
                      ++|..||...++.+.+.|+|=||.+|.|+.+++.--.|-+ +   .+.+++.+|.+|..++.. ...++.+..+.+.+.+
T Consensus         3 D~L~~dls~Lsq~m~~~LLe~i~~~YddY~~fC~~f~~~n~E~l~eLQ~v~~Dl~~F~~QL~qL~~~~i~~Tre~v~d~l   82 (204)
T 2jqq_A            3 DSLIRDLSGLSQKMVQTLLEQIRSNYDDYLTFSNTYTDEENETLINLEKTQSDLQKFMTQLDHLIKDDISNTQEIIKDVL   82 (204)
T ss_dssp             ------------------------------------------------CHHHHHHHHHHHHHHHHHHSCSTTHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            6789999999999999999999999999999999998832 2   345555667777666665 3344555555556555


Q ss_pred             HHHHHHHHHHHHH------HHHHHHHHHH-HHHHHHhhhCCCCCCCCCCcccchhhhhccCCCCCCCcccCCcccccchh
Q 009030          130 KQRSEAASAREVL------ELLLDTFHVV-SKVEKLIKELPSLPADGSDFDVNLEERKSMSSATTFQPVENGTNVRETQS  202 (546)
Q Consensus       130 ~~R~~l~~~k~~L------~lll~~~~~v-~klE~LL~~l~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  202 (546)
                      +.-+++.+-...|      ..++.+...+ ..|+.+-+.-   |                      .+      .... .
T Consensus        83 ~YLkkLD~l~~~Lq~h~~Lse~l~l~kqLs~sLh~mC~~~---p----------------------ld------~eLc-~  130 (204)
T 2jqq_A           83 EYLKKLDEIYGSLRNHSQLTEALSLGKRLSKSLHEMCGIE---P----------------------LE------EEIC-S  130 (204)
T ss_dssp             HHHHHHHHHHHTCSSSSHHHHHHHHHHHHHHHHHHHHTSS---C----------------------CC------HHHH-H
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---C----------------------Cc------HHHH-H
Confidence            5555555444322      1112222211 1233332110   0                      00      0000 1


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC--CCcchHhHHHHHHHHHHHHHHHHhHHHHhhhh
Q 009030          203 MLLERIASEMNRLKFYIAHAQ--NLPFIENMEKRIKSASLLLDASLGHCFVHGLE  255 (546)
Q Consensus       203 ~~LeRiA~e~~~L~~~~~~~~--~~pfv~~~~~RI~~i~~~L~~~L~~~~~~~l~  255 (546)
                      .+..++-.-+...+.......  +-|++..++.-...+-.+++..|.-....+++
T Consensus       131 ~l~~qL~~L~~~~~~ll~~l~dl~Sp~l~h~RN~yq~i~q~Fqi~lk~LtdkClE  185 (204)
T 2jqq_A          131 GLIEQLYKLITASRRILESCADSNSPYIHHLRNDYQDLLQEFQISLKILTEKCLE  185 (204)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            123333333334444344443  57999999988888888888888666555555

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00