Citrus Sinensis ID: 009383

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530------
Protein Sequence
MSLYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEEEcccccccccEEEEccccccccccccccEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEcccccHHHHcccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mslyfrsnpplflPFLVIFLSLFLFtrqtsaspphshfhtvvpipereyggvSLWKLKRYlaeeptdnstlILAEKrtqrkdpidnfhkykggwnisnkhywasvgftaapFFIIAGIWFVVFGLSLCFMClhycccrrepygysrtCYALSLILLVFFTISAIVGCIVLYtgqgkfhsstldTLNYVVKQAHITSESLQNVSDYLAAAKTIgvnsvtlapdvqsnidkidrkinssattlsyqtkknSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADtcvsmdewvknptahtalddilpcvdnaTAQETLKQTKTVTNQLVSVVDRIIINVvnrnflpqagivyynqsgpllpvlcnpfnsdltnrqcvasevdfsNATEVWKnyicqpsssgicktpgrltptlhNQMASAVNVSYALYRygpflvnlqdctfvrdtftdisrdhcpglqrhskWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Flexible Loop (DISEMBL)
mslyfrsnpplFLPFLVIFLSLFLFTRQTsaspphshfhtvvpipereYGGVSLWKLKRYLaeeptdnstlilaekrtqrkdpidnfhKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNsvtlapdvqsnidkidrkinssattlsyqtkknskDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTahtalddilPCVDNATAQEtlkqtktvtnqlvSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYicqpsssgicKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Low Complexity Region (SEG)
MSLYFRSNpplflpflviflslflfTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLvsvvdriiinvvnrnFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Disordered region (IsUnstruct)
***YFRSNPPLFLPFLVIFLSLFLFTRQTS****HSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAE******DPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKI*********************IKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVY******
Disordered Region (DISOPRED)
*********PLFLPFLVIFLSLFLFTR***********************************************EKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARE************
Disordered Region (DISEMBL)
MSLYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Disordered Region (DISPRO)
****FRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYT*****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
224142471	550	predicted protein [Populus trichocarpa]	0.998	0.972	0.685	0.0
225463055	551	PREDICTED: uncharacterized protein LOC10	0.986	0.960	0.680	0.0
449457947	536	PREDICTED: uncharacterized protein LOC10	0.904	0.904	0.704	0.0
356530599	541	PREDICTED: uncharacterized protein LOC10	0.958	0.950	0.669	0.0
356556557	539	PREDICTED: uncharacterized protein LOC10	0.912	0.907	0.704	0.0
297835940	540	hypothetical protein ARALYDRAFT_899530 [	0.914	0.907	0.679	0.0
30678837	541	uncharacterized protein [Arabidopsis tha	0.889	0.881	0.691	0.0
224143225	503	predicted protein [Populus trichocarpa]	0.897	0.956	0.631	1e-179
356515208	545	PREDICTED: uncharacterized protein LOC10	0.912	0.897	0.602	1e-177
449493681	544	PREDICTED: uncharacterized protein LOC10	0.964	0.950	0.604	1e-177

>gi|224142471|ref|XP_002324581.1| predicted protein [Populus trichocarpa] gi|222866015|gb|EEF03146.1| predicted protein [Populus trichocarpa]

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/540 (68%), Positives = 437/540 (80%), Gaps = 5/540 (0%)

Query: 1   MSLYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTV----VPIPEREYGGVSL-W 55
           MS   RSNPPLF     +F      +   + S   S F +     V +  RE  GV + W
Sbjct: 1   MSCNNRSNPPLFFLLSFLFFFFIFTSSTATPSSLTSQFESFSVPDVVVGGRENDGVVVSW 60

Query: 56  KLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFII 115
           +++R+LAEE    S+LILA K+T+R+DP++NF  Y  G+NISNKHYWASVGFTA PFFI+
Sbjct: 61  EIRRHLAEEENTASSLILAAKKTRRRDPLENFKFYTSGYNISNKHYWASVGFTAVPFFIL 120

Query: 116 AGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQG 175
           A +WFV+FGL L F+CL YCCC  EPYGYSR CYALSLI L+ FTI+AI GC+VLYTGQG
Sbjct: 121 ALVWFVIFGLCLSFICLCYCCCPTEPYGYSRACYALSLIYLILFTIAAIAGCVVLYTGQG 180

Query: 176 KFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKIN 235
           KFHS T  TL YVV QA++T+++L++VSDYLAAAK  GV SV L P VQ++ID I +KIN
Sbjct: 181 KFHSITTHTLEYVVNQANVTAKNLRHVSDYLAAAKNTGVESVFLPPSVQNDIDSIQKKIN 240

Query: 236 SSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVIL 295
           SS TTLS  T+ NS+ I++ LDS+ LALII+AAVML +AFLGFLFS+FG+QCLVYFLVIL
Sbjct: 241 SSGTTLSSTTQDNSEGIQNVLDSMRLALIILAAVMLAVAFLGFLFSIFGMQCLVYFLVIL 300

Query: 296 GWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQ 355
           GW+LV GTFILCG+FLLLHNVVADTC+SMDEWV+NPTA TALDDI+PCVDNATAQETL+Q
Sbjct: 301 GWVLVTGTFILCGVFLLLHNVVADTCISMDEWVQNPTAKTALDDIIPCVDNATAQETLRQ 360

Query: 356 TKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASE 415
           TK  T QLV+VVD ++ NV NRNF PQAG +YYNQSGPL+PVLCNPFNSD T+R+C A E
Sbjct: 361 TKETTYQLVNVVDYVVSNVSNRNFPPQAGDLYYNQSGPLMPVLCNPFNSDFTDRKCAAGE 420

Query: 416 VDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDC 475
           VD SNAT+VWKNYICQ SSS IC TPGRLTP+L+NQM SAVN+SY L RYGPFLVNL+DC
Sbjct: 421 VDLSNATQVWKNYICQVSSSEICITPGRLTPSLYNQMESAVNLSYGLNRYGPFLVNLEDC 480

Query: 476 TFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLM 535
           TFVR+TFT IS  +CP L+R+S+WIYIGL +VSAAVMLSLIFWVIYARERRHRVYTK  M
Sbjct: 481 TFVRETFTKISHSYCPDLRRYSQWIYIGLVIVSAAVMLSLIFWVIYARERRHRVYTKQFM 540

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463055|ref|XP_002268417.1| PREDICTED: uncharacterized protein LOC100267143 [Vitis vinifera] gi|296084555|emb|CBI25576.3| unnamed protein product [Vitis vinifera]

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/541 (68%), Positives = 426/541 (78%), Gaps = 12/541 (2%)

Query: 3   LYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPH--SHFHTVVPI------PEREYGGVSL 54
           LY RS    +  FL++ L   +F   TS +  H  S  H   P+        RE GG+  
Sbjct: 2   LYLRS----YSAFLLLLLPFCIFIASTSFTFSHGSSQLHHPQPLRVQEVFGGRENGGLVP 57

Query: 55  WKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFI 114
           WK +R LAE   DNS+LILA KRT RKDP D F  Y GGWNISN HYWASV +TA PFF+
Sbjct: 58  WKTRRSLAEGSGDNSSLILAAKRTHRKDPSDGFSYYTGGWNISNGHYWASVSYTAVPFFV 117

Query: 115 IAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQ 174
           + GIWFV+FGL L  +CL YCCCRREPYGYSRT YALSLILL+ FTI+AI+GC+VLYTGQ
Sbjct: 118 LGGIWFVLFGLCLSLICLCYCCCRREPYGYSRTAYALSLILLILFTIAAIIGCVVLYTGQ 177

Query: 175 GKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKI 234
           GKFH ST  TL YVV QA  TSE+L+NVS+YL+AAK IG+ S  L  +VQ+NID  + KI
Sbjct: 178 GKFHGSTTSTLGYVVDQAETTSENLKNVSEYLSAAKRIGIGSSFLPANVQTNIDHAETKI 237

Query: 235 NSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVI 294
           N+SATTL  +T+KNSKDI+D LD+V LALI++AAVML L FLGFLFS+ GLQCLVYFLVI
Sbjct: 238 NASATTLDTKTQKNSKDIQDLLDAVRLALIVLAAVMLLLVFLGFLFSILGLQCLVYFLVI 297

Query: 295 LGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLK 354
           +GWILV  TFILCGIFLLLHNVVADTCV+MDEWV+NPTA TALDDILPCVDNATAQETL 
Sbjct: 298 IGWILVTSTFILCGIFLLLHNVVADTCVAMDEWVQNPTARTALDDILPCVDNATAQETLL 357

Query: 355 QTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVAS 414
           +TK VT QLV+VV+ +I NV N NF P    +Y+NQSGPL+PVLCNPFN+DLT RQC A 
Sbjct: 358 RTKDVTYQLVTVVNTVITNVSNINFAPNFVPLYFNQSGPLVPVLCNPFNADLTARQCSAG 417

Query: 415 EVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQD 474
           EVD  NAT+VW NY+CQ S+SGIC TPGRLTP+ +NQMA+AVN+SY LY YGP+LV+LQD
Sbjct: 418 EVDLDNATQVWSNYVCQVSASGICTTPGRLTPSYYNQMAAAVNISYGLYHYGPYLVDLQD 477

Query: 475 CTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNL 534
           CTFVR TFT IS DHCP L+++SKWIY GL MVS AVM+SLIFWVIYARERRHRVYTK  
Sbjct: 478 CTFVRQTFTVISDDHCPELRKYSKWIYTGLVMVSVAVMMSLIFWVIYARERRHRVYTKTH 537

Query: 535 M 535
           M
Sbjct: 538 M 538

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457947|ref|XP_004146709.1| PREDICTED: uncharacterized protein LOC101216821 [Cucumis sativus] gi|449516629|ref|XP_004165349.1| PREDICTED: uncharacterized protein LOC101229697 [Cucumis sativus]

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/487 (70%), Positives = 405/487 (83%), Gaps = 2/487 (0%)

Query: 51  GVSLWK-LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTA 109
            V LW+   R LAE   DNS+LILAE RT RKDP++NF +Y GGWNI NKHYWASV FTA
Sbjct: 45  AVELWEPAGRNLAESTVDNSSLILAETRTNRKDPLNNFQRYTGGWNIKNKHYWASVAFTA 104

Query: 110 APFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIV 169
           APFF+IAGIWFVVFGLSL  +CL YCCCRREPYGYSR  YALSLI L+ FTI+AIVGCIV
Sbjct: 105 APFFVIAGIWFVVFGLSLFLICLCYCCCRREPYGYSRLAYALSLIFLILFTIAAIVGCIV 164

Query: 170 LYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDK 229
           LYTGQGKFHS T  TL+YVV QA  T  +L+NVS YL+AAK IGV +  L+PD+Q  ID+
Sbjct: 165 LYTGQGKFHSITTKTLDYVVGQAEDTVVNLRNVSGYLSAAKKIGVATAFLSPDIQGRIDE 224

Query: 230 IDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLV 289
           IDRK+NSSA TLS +T +NSK+I+  LD + LALII+AA+ML LAFLGFLFS+ G+Q LV
Sbjct: 225 IDRKLNSSAITLSEKTGENSKNIQYVLDHIRLALIILAAIMLLLAFLGFLFSILGMQSLV 284

Query: 290 YFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATA 349
           Y LVI+GWILVAGTFILCG+FLLLHNVVADTCVSM+EWV+NPTAHTALDDILPCVDNATA
Sbjct: 285 YSLVIIGWILVAGTFILCGVFLLLHNVVADTCVSMNEWVQNPTAHTALDDILPCVDNATA 344

Query: 350 QETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGI-VYYNQSGPLLPVLCNPFNSDLTN 408
           QETL Q+K V  QLV VV+ +I  + N NF P AG   Y+NQSGP +P+LCNPF ++LT+
Sbjct: 345 QETLTQSKNVAFQLVDVVNNVITGISNANFPPSAGAPFYFNQSGPSMPILCNPFYANLTD 404

Query: 409 RQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPF 468
           R C + EV+  NAT VWKN++C+ S+SGIC TPGRLTPT ++QM +AVNV++ LY+YGP+
Sbjct: 405 RLCASGEVELGNATVVWKNFVCEASASGICTTPGRLTPTYYSQMTAAVNVTFGLYKYGPY 464

Query: 469 LVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHR 528
           LV+LQDC+FVR TFTDI  ++CPGL R+++WIYIGL MVSAAVMLSLIFWVIYARERRHR
Sbjct: 465 LVSLQDCSFVRQTFTDIQDNYCPGLGRYTQWIYIGLVMVSAAVMLSLIFWVIYARERRHR 524

Query: 529 VYTKNLM 535
           VYTK+ M
Sbjct: 525 VYTKSHM 531

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530599|ref|XP_003533868.1| PREDICTED: uncharacterized protein LOC100797376 [Glycine max]

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/524 (66%), Positives = 418/524 (79%), Gaps = 10/524 (1%)

Query: 21  SLFLFTRQTSASPPHSHFHTVVPIPEREYGG-------VSLWKLKRYLAEEP-TDNSTLI 72
           S+  F+  T+A    S FH++      E GG       V  WK +R +AEE  T N++LI
Sbjct: 19  SISFFSPSTAART--SSFHSLRISDGVEDGGEGEYYHEVLPWKTRRSMAEEEATSNTSLI 76

Query: 73  LAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCL 132
           LA++RT RKDP+DN++ Y GGWNISN+HY ASV FTA PFF++A +WFV+FGLSL F+CL
Sbjct: 77  LAQRRTTRKDPLDNYNHYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSFICL 136

Query: 133 HYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQA 192
            YCCC REPYGYSR  YALSLI LV FT++AIVGC++LYT QGKFH ST +TL  +V QA
Sbjct: 137 CYCCCPREPYGYSRLAYALSLIFLVLFTLAAIVGCVLLYTAQGKFHGSTTNTLKSLVSQA 196

Query: 193 HITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDI 252
             T+E+L+NVSDYL AA+ IGV +V L  DVQ NID++  KINSSA  LS +TKKNS+ I
Sbjct: 197 DFTAENLRNVSDYLDAAQKIGVEAVFLPADVQKNIDEVQMKINSSAADLSSKTKKNSETI 256

Query: 253 KDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLL 312
           KD +D++   L+I+AAVMLFLAFLGFLFS+FGLQ LVYFLVI+GWILVAGTFILCG+FL 
Sbjct: 257 KDVIDAMRRDLVILAAVMLFLAFLGFLFSIFGLQGLVYFLVIVGWILVAGTFILCGVFLF 316

Query: 313 LHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIII 372
           LHNVVADTCV+MDEWV+NPTAHTALD+ILPCVDNATAQETL +T+ VT+QL +++  I+ 
Sbjct: 317 LHNVVADTCVAMDEWVQNPTAHTALDEILPCVDNATAQETLFRTRDVTHQLANLLGNIVS 376

Query: 373 NVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQP 432
           NV NRN  P AG +YYNQSGPL+P LCNPFN+DLTNR C   EV    A EVWKNYIC+ 
Sbjct: 377 NVTNRNLPPAAGPLYYNQSGPLMPPLCNPFNNDLTNRSCADGEVSLDKAAEVWKNYICEV 436

Query: 433 SSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPG 492
           SSS ICKTPGR+TPT++ QM +AVNVSY LY YGPFLV LQDCTFVR  FTDIS +HCPG
Sbjct: 437 SSSDICKTPGRMTPTVYGQMEAAVNVSYGLYHYGPFLVGLQDCTFVRKIFTDISNNHCPG 496

Query: 493 LQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD 536
           LQR+S+ IYIGL +VSAAVMLSLIFWVIYARERRHRVYTK  ++
Sbjct: 497 LQRNSQLIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIE 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556557|ref|XP_003546591.1| PREDICTED: uncharacterized protein LOC100809927 [Glycine max]

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/501 (70%), Positives = 413/501 (82%), Gaps = 12/501 (2%)

Query: 37  HFHTVVPIPEREYGGVSLWKLKRYLAEEP-TDNSTLILAEKRTQRKDPIDNFHKYKGGWN 95
           H+H V+P           WK +R +AEE  T N++LILA+KRT RKDP+DNF++Y GGWN
Sbjct: 49  HYHEVLP-----------WKTRRSMAEEEATSNASLILAQKRTTRKDPLDNFNRYTGGWN 97

Query: 96  ISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLIL 155
           ISN+HY ASV FTA PFF++A +WFVVFGLSL  +CL YCCC REPYGYSR  YALSLI 
Sbjct: 98  ISNRHYIASVVFTAVPFFVVAAVWFVVFGLSLSLICLCYCCCPREPYGYSRLAYALSLIF 157

Query: 156 LVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVN 215
           L+ FT++AIVGC++LYT QGKFH ST  TL YVV QA  T+E+L+NVS YL AA+ IGV+
Sbjct: 158 LILFTLAAIVGCVLLYTAQGKFHGSTTSTLKYVVSQADFTAENLRNVSHYLDAAQKIGVD 217

Query: 216 SVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAF 275
           +V L  DVQ NID++  KINSSA  LS +TK+NS+ IKD +D++ LAL+IVAAVMLFLAF
Sbjct: 218 AVFLPGDVQKNIDEVQTKINSSAAELSSKTKENSETIKDVIDAMRLALVIVAAVMLFLAF 277

Query: 276 LGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHT 335
           LGFLFS+FGLQ LVYFLVI+GWILVAGTFILCG+FL LHNVVADTCV+MD WV+NPTAHT
Sbjct: 278 LGFLFSIFGLQGLVYFLVIVGWILVAGTFILCGVFLFLHNVVADTCVAMDGWVQNPTAHT 337

Query: 336 ALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLL 395
           ALD+ILPCVDNATAQETL +T+ VT+QLV++VD I+ NV NRN  P A  +YYNQSGPL+
Sbjct: 338 ALDEILPCVDNATAQETLLRTRDVTHQLVNLVDNIVSNVTNRNLPPAAVPLYYNQSGPLM 397

Query: 396 PVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASA 455
           P LCNPFNSDLTNR C   EV   NA EVWKNY C+ SSSGICKTPGR+TPT++ QM +A
Sbjct: 398 PRLCNPFNSDLTNRSCADGEVSLDNAAEVWKNYTCEVSSSGICKTPGRMTPTIYGQMEAA 457

Query: 456 VNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSL 515
           VNVSY LY YGPFLV+LQDCTFVR TFTDIS DHCPGLQR+S+ IYIGL +VSAAVMLSL
Sbjct: 458 VNVSYGLYHYGPFLVDLQDCTFVRKTFTDISNDHCPGLQRNSQLIYIGLVLVSAAVMLSL 517

Query: 516 IFWVIYARERRHRVYTKNLMD 536
           IFWVIYARERRHRVYTK  ++
Sbjct: 518 IFWVIYARERRHRVYTKQFIE 538

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835940|ref|XP_002885852.1| hypothetical protein ARALYDRAFT_899530 [Arabidopsis lyrata subsp. lyrata] gi|297331692|gb|EFH62111.1| hypothetical protein ARALYDRAFT_899530 [Arabidopsis lyrata subsp. lyrata]

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/493 (67%), Positives = 400/493 (81%), Gaps = 3/493 (0%)

Query: 44  IPEREYGGVSLWK---LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKH 100
           +   E GGV  W+   ++R +AEE  +NS+LILA KRT+RKDP DNF  Y GGWNISN H
Sbjct: 34  VGNEEVGGVEEWRTSVIERVIAEESGENSSLILAAKRTKRKDPNDNFKFYTGGWNISNSH 93

Query: 101 YWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFT 160
           Y  SVG+TA PF IIA +WFV FGLSL  +CL YCCC R+PYGYSR  YALSLILL+ FT
Sbjct: 94  YLTSVGYTAVPFIIIAVVWFVFFGLSLSLICLCYCCCARQPYGYSRVAYALSLILLISFT 153

Query: 161 ISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLA 220
           I+AI+GCI LYTGQGKFH+ST DTL YVV QA++TSE+L+NVSDYL AAK + V S  L 
Sbjct: 154 IAAIIGCIFLYTGQGKFHASTTDTLEYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILP 213

Query: 221 PDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLF 280
            DV S+ID I  KINSSATTLS +T +N   I++ LDS+ LAL+I+AAVMLFLAF+GFL 
Sbjct: 214 QDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDSMRLALVIIAAVMLFLAFIGFLL 273

Query: 281 SVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDI 340
           S+FGLQCLVY LVILGWILV  TF+LCG FLLLHNVV DTCV+MD+WV+NPTAHTALDDI
Sbjct: 274 SIFGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDI 333

Query: 341 LPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCN 400
           LPCVDNATA+ETL +TK VT +LV+++D  I N+ NRNF PQ   +YYNQSGPL+P+LCN
Sbjct: 334 LPCVDNATARETLDRTKLVTYKLVNLLDNAISNMTNRNFPPQLRPLYYNQSGPLMPLLCN 393

Query: 401 PFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSY 460
           PFN+DL++ QC   EV  +NATEVWKN+ CQ  + G C T GRLTP L++QMA+AVNVSY
Sbjct: 394 PFNADLSDHQCQPGEVHLNNATEVWKNFTCQIVTPGTCSTQGRLTPKLYSQMAAAVNVSY 453

Query: 461 ALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVI 520
            LY+YGPFL +LQ C FVR TFTDI RDHCPGL+R+++WIY+GL +VSA+VM SL+FWVI
Sbjct: 454 GLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVI 513

Query: 521 YARERRHRVYTKN 533
           YARERRHRVYTK+
Sbjct: 514 YARERRHRVYTKD 526

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30678837|ref|NP_178935.2| uncharacterized protein [Arabidopsis thaliana] gi|25083238|gb|AAN72054.1| unknown protein [Arabidopsis thaliana] gi|330251102|gb|AEC06196.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/477 (69%), Positives = 395/477 (82%)

Query: 57  LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIA 116
           ++R +AEE  +NS+LILA KRT+RKDP DNF  Y GGWNISN HY  SVG+TAAPF IIA
Sbjct: 51  IERVIAEESGENSSLILAAKRTRRKDPADNFKLYTGGWNISNSHYLTSVGYTAAPFIIIA 110

Query: 117 GIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGK 176
            +WFV FGLSL  +CL YCCC R+ YGYSR  YALSLILL+ FTI+AI+GC+ LYTGQGK
Sbjct: 111 LVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYALSLILLISFTIAAIIGCVFLYTGQGK 170

Query: 177 FHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINS 236
           FH+ST DTL+YVV QA++TSE+L+NVSDYL AAK + V S  L  DV S+ID I  KINS
Sbjct: 171 FHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSSIDNIQGKINS 230

Query: 237 SATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILG 296
           SATTLS +T +N   I++ LD + LAL+I+AAVMLFLAF+GFL S+FGLQCLVY LVILG
Sbjct: 231 SATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILG 290

Query: 297 WILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQT 356
           WILV  TF+LCG FLLLHNVV DTCV+MD+WV+NPTAHTALDDILPCVDNATA+ETL +T
Sbjct: 291 WILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNATARETLTRT 350

Query: 357 KTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEV 416
           K VT QLV+++D  I N+ NRNF PQ   +YYNQSGPL+P+LCNPFN+DL++RQC   +V
Sbjct: 351 KLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPFNADLSDRQCQPGQV 410

Query: 417 DFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCT 476
             +NATEVWKN+ CQ  + G C TPGRLTP L++QMA+AVNVSY LY+YGPFL +LQ C 
Sbjct: 411 HLNNATEVWKNFTCQIVTPGTCSTPGRLTPKLYSQMAAAVNVSYGLYKYGPFLADLQGCD 470

Query: 477 FVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKN 533
           FVR TFTDI RDHCPGL+R+++WIY+GL +VSA+VM SL+FWVIYARERRHRVYTK+
Sbjct: 471 FVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYARERRHRVYTKD 527

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143225|ref|XP_002324886.1| predicted protein [Populus trichocarpa] gi|222866320|gb|EEF03451.1| predicted protein [Populus trichocarpa]

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/486 (63%), Positives = 383/486 (78%), Gaps = 5/486 (1%)

Query: 55  WKLKRYLAE----EPTDNS-TLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTA 109
           W  +R + E    EP DNS  L+LA KRT RKDP+++F ++ GGWNIS++HYWASVGFTA
Sbjct: 5   WGTRRPVVEAPIGEPVDNSPVLVLAPKRTYRKDPLNDFKRHTGGWNISDRHYWASVGFTA 64

Query: 110 APFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIV 169
           AP F IA +WF+VFGL L F CL + CC+R+ YGYS+T YALSL+ L+ F+I A++GC+V
Sbjct: 65  APLFAIAAVWFLVFGLCLLFGCLCHFCCKRQRYGYSQTAYALSLVFLILFSICAMIGCVV 124

Query: 170 LYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDK 229
           LYT Q +FH ST +TL YVV QA  T + L+ VSD++A+AK +GV+ V L  +VQ++ID+
Sbjct: 125 LYTAQERFHKSTTETLEYVVNQADTTVDKLRAVSDFIASAKLVGVDEVFLPSNVQTDIDQ 184

Query: 230 IDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLV 289
           I  +INSSA+ L+ +T  NS+DIKD LDSV +ALI  AA+ML L FLGFLFS+FG+Q LV
Sbjct: 185 IGTRINSSASVLADKTVDNSEDIKDLLDSVRVALITTAAIMLLLTFLGFLFSIFGMQFLV 244

Query: 290 YFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATA 349
           Y LVI+GWILVAGTFILCG FLLLHNV  DTCV+MD WV NPTAHTALDDILPCVD AT 
Sbjct: 245 YILVIVGWILVAGTFILCGTFLLLHNVAGDTCVAMDHWVHNPTAHTALDDILPCVDQATT 304

Query: 350 QETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNR 409
           Q+TL ++K +T+QLV VV+++I NV N NF P    +Y NQSGPL+P+LCNPF +DLT R
Sbjct: 305 QDTLIKSKEITSQLVEVVNQVITNVSNLNFSPNFKPMYINQSGPLVPILCNPFYADLTIR 364

Query: 410 QCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFL 469
            C A EVD +NAT+VW +Y+CQ S SGIC T GRLTP  ++QM++A+NVSY L  Y PFL
Sbjct: 365 PCSAGEVDLTNATQVWSSYVCQVSPSGICATTGRLTPAFYSQMSAAINVSYGLNNYAPFL 424

Query: 470 VNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRV 529
           + L DCTF R+TF+DI +DHCP L+R+S+WIYIGL MVS AVMLSLIFWVIY RERRHRV
Sbjct: 425 IELGDCTFARETFSDIYKDHCPSLRRYSRWIYIGLVMVSTAVMLSLIFWVIYGRERRHRV 484

Query: 530 YTKNLM 535
           Y+K L+
Sbjct: 485 YSKQLV 490

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515208|ref|XP_003526293.1| PREDICTED: uncharacterized protein LOC100816139 [Glycine max]

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/491 (60%), Positives = 379/491 (77%), Gaps = 2/491 (0%)

Query: 48  EYGGVSLWKLKRY--LAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASV 105
           E  G ++  L R    A  P ++S   LA +RT+RKDP+D F+KY  GWNI++  YWASV
Sbjct: 32  ENEGKNVVGLSRLYVFAAAPFESSPFPLAAERTRRKDPLDGFNKYIYGWNITSSDYWASV 91

Query: 106 GFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIV 165
            +TAAP F IA +WF+ FGL L  + + Y C +REPYGYS TCYALSLILL+ FT +A++
Sbjct: 92  AYTAAPLFSIAAVWFLGFGLCLVIIGVCYFCHKREPYGYSPTCYALSLILLILFTFTALI 151

Query: 166 GCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQS 225
           GC VLY GQG FH S   TL YVV QA  T + L+NVSDYLA AK +G++ V L  +VQ+
Sbjct: 152 GCAVLYIGQGSFHHSMTHTLQYVVHQADSTVDKLRNVSDYLAQAKQVGIDRVFLPTNVQT 211

Query: 226 NIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGL 285
           +ID+ +  IN+SA+TL+ +TK+NS +I+D LDS  LALII+AAVML L FLGFLFS+FG+
Sbjct: 212 DIDQAETDINNSASTLADKTKENSDNIQDLLDSARLALIIIAAVMLVLTFLGFLFSIFGI 271

Query: 286 QCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVD 345
           Q LVY LVI GW+LV GT ILCG+FL+LHN  AD+C++++EW++ PTAHTA+DDILPCVD
Sbjct: 272 QLLVYILVIAGWVLVTGTLILCGLFLVLHNATADSCIAVNEWIQYPTAHTAMDDILPCVD 331

Query: 346 NATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSD 405
           NATAQETL ++K VT++LV++V+++I NV N NF P    +YYNQSGPL+P+LCNPF+ D
Sbjct: 332 NATAQETLSRSKEVTSELVNLVNQVITNVSNLNFAPNFTPLYYNQSGPLMPLLCNPFHPD 391

Query: 406 LTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRY 465
           +T+RQC A EV  SNAT+V+ N++CQ S S IC T GRLTPT +NQ+++ +NV  ALY Y
Sbjct: 392 MTDRQCDAGEVTLSNATQVYGNFVCQVSPSEICMTQGRLTPTFYNQISAGINVGNALYDY 451

Query: 466 GPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARER 525
            P L+ LQDCTFVR+T +DISRDHCPGLQR+S+WIYIGL MVS AVM SLIFW++Y RER
Sbjct: 452 APSLIELQDCTFVRETLSDISRDHCPGLQRYSRWIYIGLVMVSFAVMFSLIFWIVYGRER 511

Query: 526 RHRVYTKNLMD 536
           RHR+Y K   D
Sbjct: 512 RHRLYRKESKD 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493681|ref|XP_004159409.1| PREDICTED: uncharacterized protein LOC101229225 [Cucumis sativus]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 319/528 (60%), Positives = 392/528 (74%), Gaps = 11/528 (2%)

Query: 15  FLVIFLSLFLFTRQTSASPPHSHFHTVVPIPE-----REYGGVSLWKLKRYLAEE-PTDN 68
           F ++F SLFLF+  +      S     +PI E      E+     W+  R LAE+ P  N
Sbjct: 10  FSLLFYSLFLFSHSSLTVSALS----AIPIFENSAGVEEFQVSEPWRTGRSLAEQDPAVN 65

Query: 69  STLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLC 128
           S+L+LAE RT+RKDP+D+F  Y GGWNISN+HYWASV FT+ PF ++   WFV+FG+ L 
Sbjct: 66  SSLVLAEDRTRRKDPLDDFKPYTGGWNISNQHYWASVAFTSIPFSVLGIAWFVLFGICLF 125

Query: 129 FMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYV 188
             CL  CCCRREPYGYSRT YALSL  L+FFTISAIVGC+VLY GQGKFHS T  TL Y+
Sbjct: 126 ITCLCCCCCRREPYGYSRTAYALSLAFLIFFTISAIVGCVVLYVGQGKFHSRTSSTLEYI 185

Query: 189 VKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKN 248
           V QA  T+E+L+N+S YL++AK+I V+S+ L PD+Q  ID I  KI+S ++TL+     N
Sbjct: 186 VNQADGTAENLKNLSVYLSSAKSIKVDSIFLTPDIQKGIDDIGTKISSVSSTLTDAASNN 245

Query: 249 SKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCG 308
           S  I+  LD   L LII+AAVML LAF+GFL S+FGLQC+VY LVILGWILV  TF LCG
Sbjct: 246 SDTIQKGLDKNRLILIIIAAVMLLLAFIGFLCSIFGLQCVVYTLVILGWILVTVTFFLCG 305

Query: 309 IFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVD 368
            FLLLHNVV DTCV+M++W++NPTA+TALDDILPCVDNATA++    TK V+ QLVS+V+
Sbjct: 306 AFLLLHNVVGDTCVAMEDWLQNPTANTALDDILPCVDNATAKQIQSVTKNVSFQLVSLVN 365

Query: 369 RIIINVVNRNFLPQAG-IVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKN 427
            +I  V N N  P  G  V YNQSGPL+P LC+ FNSDLT+R C+A+EV  + A  VWK+
Sbjct: 366 GVINTVSNVNPPPNIGPPVNYNQSGPLVPPLCSRFNSDLTSRTCLANEVQLNEAPAVWKD 425

Query: 428 YICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISR 487
           + CQ S+SGIC T GRLTP L+NQM +A NVSY LYRYGPFLV L DCTFVR  FTDIS 
Sbjct: 426 FTCQVSASGICTTTGRLTPALYNQMTAAANVSYGLYRYGPFLVELVDCTFVRQVFTDISN 485

Query: 488 DHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLM 535
           +HCPGL+ ++KWIY+GL ++S AVM SLIFW+IYARERRHRVYTK  +
Sbjct: 486 NHCPGLRLYTKWIYVGLVLMSGAVMFSLIFWIIYARERRHRVYTKQFI 533

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
TAIR|locus:2046079	541	AT2G12400 "AT2G12400" [Arabido	0.910	0.902	0.665	1.3e-178
TAIR|locus:2059567	545	AT2G25270 [Arabidopsis thalian	0.858	0.844	0.536	1e-139
TAIR|locus:2198923	538	AT1G80540 "AT1G80540" [Arabido	0.929	0.925	0.463	7.1e-116
TAIR|locus:2026276	557	AT1G71110 "AT1G71110" [Arabido	0.884	0.850	0.456	1.5e-108
TAIR|locus:2158581	509	AT5G67550 "AT5G67550" [Arabido	0.805	0.848	0.206	7.5e-22

TAIR|locus:2046079 AT2G12400 "AT2G12400" [Arabidopsis thaliana (taxid:3702)]

 Score = 1734 (615.5 bits), Expect = 1.3e-178, P = 1.3e-178
 Identities = 327/491 (66%), Positives = 389/491 (79%)

Query:    46 EREYGGVSLWK---LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYW 102
             E E G    W+   ++R +AEE  +NS+LILA KRT+RKDP DNF  Y GGWNISN HY 
Sbjct:    37 EEERGVEEEWRTSVIERVIAEESGENSSLILAAKRTRRKDPADNFKLYTGGWNISNSHYL 96

Query:   103 ASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTIS 162
              SVG+TAAPF IIA +WFV FGLSL  +CL YCCC R+ YGYSR  YALSLILL+ FTI+
Sbjct:    97 TSVGYTAAPFIIIALVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYALSLILLISFTIA 156

Query:   163 AIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPD 222
             AI+GC+ LYTGQGKFH+ST DTL+YVV QA++TSE+L+NVSDYL AAK + V S  L  D
Sbjct:   157 AIIGCVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQD 216

Query:   223 VQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSV 282
             V S+ID I  KINSSATTLS +T +N   I++ LD + LAL+I+AAVMLFLAF+GFL S+
Sbjct:   217 VLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSI 276

Query:   283 FGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILP 342
             FGLQCLVY LVILGWILV  TF+LCG FLLLHNVV DTCV+MD+WV+NPTAHTALDDILP
Sbjct:   277 FGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILP 336

Query:   343 CVDNATAQETLKQTKTVTNQLXXXXXXXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPF 402
             CVDNATA+ETL +TK VT QL               F PQ   +YYNQSGPL+P+LCNPF
Sbjct:   337 CVDNATARETLTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPF 396

Query:   403 NSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYAL 462
             N+DL++RQC   +V  +NATEVWKN+ CQ  + G C TPGRLTP L++QMA+AVNVSY L
Sbjct:   397 NADLSDRQCQPGQVHLNNATEVWKNFTCQIVTPGTCSTPGRLTPKLYSQMAAAVNVSYGL 456

Query:   463 YRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYA 522
             Y+YGPFL +LQ C FVR TFTDI RDHCPGL+R+++WIY+GL +VSA+VM SL+FWVIYA
Sbjct:   457 YKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYA 516

Query:   523 RERRHRVYTKN 533
             RERRHRVYTK+
Sbjct:   517 RERRHRVYTKD 527

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2059567 AT2G25270 [Arabidopsis thaliana (taxid:3702)]

 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 247/460 (53%), Positives = 334/460 (72%)

Query:    69 STLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLC 128
             +++ LA +RT RKDP++ F KY GGWNISN+HYWASV +TA P F++A +WF+ FG+ L 
Sbjct:    68 ASVALAAQRTYRKDPLNGFEKYTGGWNISNQHYWASVSYTAVPLFVLAAVWFLGFGICLL 127

Query:   129 FMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYV 188
              +C+ + C R    GYS+  Y +SLI L+ FT+ AI+GC++LY+GQ +++ ST +TL YV
Sbjct:   128 VICMCHICHRTNSVGYSKVAYVVSLIFLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYV 187

Query:   189 VKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKN 248
             + QA  T   L+ +SDYLA+AK   V  V L  +VQ+ ID+I  K++SS  T++ ++  +
Sbjct:   188 MSQADSTISQLRAISDYLASAKQAAVLQVLLPANVQTEIDQIGVKLDSSVATITEKSTNS 247

Query:   249 SKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCG 308
             S  I+  LDSV +ALI+V+ VML + FLG + S+FG+Q +VY LVILGWILV GTFIL G
Sbjct:   248 SNHIRHFLDSVRVALIVVSIVMLVVTFLGLVSSIFGMQVIVYTLVILGWILVTGTFILSG 307

Query:   309 IFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLXXXXX 368
              FL+LHN  ADTCV+M EWV+ P+++TALD+ILPC DNATAQETL +++ VT QL     
Sbjct:   308 TFLVLHNATADTCVAMSEWVERPSSNTALDEILPCTDNATAQETLMRSREVTGQLVELIN 367

Query:   369 XXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNY 428
                       F P    +YYNQSGPLLP+LCNPFN DLT+R C   ++D +NATE W ++
Sbjct:   368 TVITNVSNINFSPVFVPMYYNQSGPLLPLLCNPFNHDLTDRSCSPGDLDLNNATEAWTSF 427

Query:   429 ICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRD 488
             +CQ S +G C T GRLTP L++QMAS VN+S  L R  PFLV LQDC++ + TF DI+ D
Sbjct:   428 VCQVSQNGTCTTTGRLTPALYSQMASGVNISTGLIRDAPFLVQLQDCSYAKQTFRDITND 487

Query:   489 HCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHR 528
             HCPGLQR+  W+Y+GL +++ AVMLSL+FW+IY+RERRHR
Sbjct:   488 HCPGLQRYGYWVYVGLAILATAVMLSLMFWIIYSRERRHR 527

GO:0005576 "extracellular region" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0031507 "heterochromatin assembly" evidence=RCA

GO:0045787 "positive regulation of cell cycle" evidence=RCA

TAIR|locus:2198923 AT1G80540 "AT1G80540" [Arabidopsis thaliana (taxid:3702)]

 Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
 Identities = 234/505 (46%), Positives = 313/505 (61%)

Query:    36 SHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWN 95
             S  H V           S   ++R + E   + + L+LA +RTQR DP+++F+ Y  GWN
Sbjct:    30 SFSHAVSSSCHHRPSSTSFQGVRRQILEGG-NGTRLVLAAERTQRPDPLNHFNIYVDGWN 88

Query:    96 ISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCR--REPYGYSRTCYALSL 153
             ++N HY ASVGF+A PF +IA  WFV+ GL L   CL  CCC   R  YGYSR CY LSL
Sbjct:    89 VTNSHYIASVGFSAVPFIVIAIAWFVLLGLFLICSCLCCCCCGCGRRNYGYSRVCYTLSL 148

Query:   154 ILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIG 213
             + L+ FTI+A++G  +LYTGQ +F+ S   T  Y+VKQA      L ++ D + +AK I 
Sbjct:   149 VFLLLFTIAAVIGSAMLYTGQNEFYGSVERTFMYIVKQATGVLTKLTSLWDSIQSAKDIQ 208

Query:   214 VNSVTL-APDVQSNIDKIDRKINSSATTLSYQTKKNS-KDIKDALDSVGLALIIVAAVML 271
             ++   L  P+ + NID  +  I  S  T   +    + + +  AL+ V   L ++A VML
Sbjct:   209 LDGHNLFPPEFRGNIDHFNNMIKMSNITYPDRVANQTIRYLTGALNPVRYVLNVIAGVML 268

Query:   272 FLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNP 331
              +AFLG LFS  GL+ LVY LVILGWILV  T +L  +FL+ HNVVADTC++MD+WV +P
Sbjct:   269 AVAFLGLLFSFCGLRVLVYLLVILGWILVTATILLSAVFLVFHNVVADTCMAMDQWVHDP 328

Query:   332 TAHTALDDILPCVDNATAQETLKQTKTVT-NQLXXXXXXXXXXXXXXXFLPQAGIVYYNQ 390
              A +AL  +LPC+D  T  ETL  TKT+T   +               F P A   Y+NQ
Sbjct:   329 AADSALSQLLPCLDPKTIGETLDITKTMTATAVDMTNAYTVNVSNHDQFPPNAPF-YHNQ 387

Query:   391 SGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHN 450
             SGPL+P+LCNP + +   R C   EV  +NA++V+K YICQ ++ GIC T GRLT   ++
Sbjct:   388 SGPLVPLLCNPLDQNHKPRPCAPDEVLLANASQVYKGYICQVNAEGICTTQGRLTQGSYD 447

Query:   451 QMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAA 510
             QM  A+NV++ L  YGPFL ++ DCTFVRDTF DI+  +CPGL   S+WIY GL  +S A
Sbjct:   448 QMMGAINVAFTLDHYGPFLASIADCTFVRDTFRDITTKNCPGLSITSQWIYAGLASLSGA 507

Query:   511 VMLSLIFWVIYARERRHRVYTKNLM 535
             VM SLIFW+I+ RERRHR  TK  M
Sbjct:   508 VMFSLIFWLIFVRERRHRSQTKKSM 532

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2026276 AT1G71110 "AT1G71110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
 Identities = 220/482 (45%), Positives = 293/482 (60%)

Query:    55 WKLKRYLAEEPTDNST----LILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAA 110
             WK    LA  P  +      L+LA  RT+R D +  F  Y GGWNI+N HYWASVGFT A
Sbjct:    46 WKGGISLAPGPESDDVVSDYLLLAAHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGA 105

Query:   111 PFFIIAGIWFVVFG-LSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIV 169
             P FI+A IW + FG L + + C  +  C +   G S     +  ILL+ FT  A VGCI+
Sbjct:   106 PGFILAVIWLLSFGSLLVVYHCFKWRICDKAK-GSSFDTRRICFILLIVFTCVAAVGCIL 164

Query:   170 LYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDK 229
             L  GQ KFH+  + TL YVV Q+  T E LQNV+ YL+ AKTI V  + +  DV   IDK
Sbjct:   165 LSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDK 224

Query:   230 IDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLV 289
             ++  +N++A TL   T  N+  IK    +V  ALI VA VML L+F+G L SV   Q +V
Sbjct:   225 LNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVV 284

Query:   290 YFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATA 349
             +  V+ GWILVA TF+LCG+FL+L+N ++DTCV+M EWV NP A TAL  ILPCVD  T 
Sbjct:   285 HIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTT 344

Query:   350 QETLKQTKTVTNQLXXXXXXXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNR 409
              +TL Q+K V N +                 P     YYNQSGP +P LC PF++++ +R
Sbjct:   345 NQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDR-YYNQSGPPMPPLCIPFDANMEDR 403

Query:   410 QCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFL 469
             QC   E+   NA+ VW+NY C+ + SGIC T GR+TP    Q+ +AVN SYAL  Y P L
Sbjct:   404 QCSPWELSIENASSVWENYKCEVTPSGICTTVGRVTPDTFGQLVAAVNESYALEHYTPPL 463

Query:   470 VNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYA-RERRHR 528
             ++ +DC FVR+TF  I+ D+CP L R+ + +  GL ++S  V+L L+ W+ YA R +R  
Sbjct:   464 LSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWIFYANRPQREE 523

Query:   529 VY 530
             V+
Sbjct:   524 VF 525

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2158581 AT5G67550 "AT5G67550" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 7.5e-22, P = 7.5e-22
 Identities = 94/455 (20%), Positives = 186/455 (40%)

Query:    76 KRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVV---FGLSLCFMCL 132
             +R +R+DP+++F  Y GG+N+ NKHYWA+  FT    + +AG+  +V    GL + F   
Sbjct:    35 ERFKRRDPLNSFRYYDGGFNVRNKHYWAATAFTGIHGYAVAGVLIIVGICLGLYVAFSDK 94

Query:   133 HY-CCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQ 191
                    R  Y   R    L L+LL+F  +S +   IV+   Q     +  + +   + +
Sbjct:    95 RRRVSSTRRRY-LDRYYLPLFLLLLLFMFLSVVTTGIVIAANQRS--KNRTEEMKETIDK 151

Query:   192 AHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKD 251
             A    +  QN+   + +   I    +    +    ++    ++   +  +        + 
Sbjct:   152 AG--EDVNQNIRTVIVSLTKIQYLLLPYDQNTTHLLNVTTHRLGKGSRLIQSFLHHKGRS 209

Query:   252 IKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFL 311
             I  A+    ++ +++ +  LFL  L FL  +         ++ L WI+    ++L G   
Sbjct:   210 IDLAIKISYVSHLMITSTNLFLLLLAFLPLLLHWHPGFIMVIFLCWIITTLCWVLTGFDF 269

Query:   312 LLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKT-VTNQLXXXXXXX 370
              +H    D C + + +V+NP   T L ++ PC+D   + +TL +    + N +       
Sbjct:   270 FIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCMDPLHSDKTLIEISLMIHNFITQLNSKV 328

Query:   371 XXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPF-----NSDLTNRQCVASEVDFSNATEVW 425
                        ++  V +    P   ++C+PF     NS  T + C    +       + 
Sbjct:   329 AESMRSNALTDRSNTVSW---APESGIICDPFVGQQINS-YTPQSCSNGAIPIGEFPNIL 384

Query:   426 KNYICQPSSSG-ICKTPGRLTP-TLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFT 483
               + C        C+  G+  P   + ++ +  N +  +    P   NL +C  V+DT +
Sbjct:   385 SRFTCHDKDPPETCRITGKFIPEAAYLKVYAYSNSAQGMLDILPSFQNLTECLAVKDTLS 444

Query:   484 DISRDHCPGLQRHSKWIYIGLFMVSAA-VMLSLIF 517
              I  + C   +     ++  +  +S   V+L L+F
Sbjct:   445 SIVSNQCDPFRASMYRLWASILALSLIMVVLVLLF 479


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      536       504   0.00085  119 3  11 22  0.46    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  322 KB (2163 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.59u 0.14s 43.73t   Elapsed:  00:00:01
  Total cpu time:  43.59u 0.14s 43.73t   Elapsed:  00:00:01
  Start:  Thu May  9 18:26:50 2013   End:  Thu May  9 18:26:51 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XVIII.3441.1 hypothetical protein (492 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	536
cd07912	418	cd07912, Tweety_N, N-terminal domain of the protei	0.001

>gnl|CDD|143653 cd07912, Tweety_N, N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 55/291 (18%)

Query: 86  NFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYS 145
            FH+    +N  ++ Y  S+   A+    I     ++  L L    +  CC R+      
Sbjct: 20  TFHRVNSTFNPEDEIYQQSLLILAS----IPAACLILSLLFLLVYLITRCCDRKPTEERP 75

Query: 146 R---TCYALSLILLVFFTISAI-VGCIVLYTGQGKFH-------SSTLDTLNYVVKQAHI 194
           R    C   SL++      +AI VG   LY G  + H        S  +  + V    + 
Sbjct: 76  RHSICCLKWSLVIATLLCCAAIGVG---LY-GNDETHDGVVQLTYSLRNANHTVAGIDNQ 131

Query: 195 TSES-----------LQNVSDYLAAAKTIGVNSVTLAPDVQ---SNIDKIDRKINSSATT 240
           TS++           L N+ D   A          +    Q   +   ++      S   
Sbjct: 132 TSDTEASLNVTVEPQLTNLEDIFDARVNKTDYLQIVQGLQQMATNAAQQLTGIPFWSLVG 191

Query: 241 LSYQTKKNSKDIKDALDSVG-LALIIVAAVMLFLAFLGF---------LFSVFGLQCLVY 290
           +S     +   + ++   +  L L+ +  V+  +  +G          +FSV GL     
Sbjct: 192 VSLTKLADQVSLYESYRWLAYLGLLSLLLVICLVLLVGLARHSRCLLIVFSVCGL----- 246

Query: 291 FLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDIL 341
           F +I+ W+ +       G++L     ++D CV  D++V+N T      DIL
Sbjct: 247 FALIISWLSL-------GLYLASAVALSDFCVDPDDYVRNQTPSGLSSDIL 290

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins. Length = 418

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	536
cd07912	418	Tweety_N N-terminal domain of the protein encoded	100.0
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	100.0
KOG4433	526	consensus Tweety transmembrane/cell surface protei	99.98
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	98.43
cd07912	418	Tweety_N N-terminal domain of the protein encoded	96.91
KOG4331	865	consensus Polytopic membrane protein Prominin [Gen	96.67
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	96.27
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	93.8
PF00957	89	Synaptobrevin: Synaptobrevin; InterPro: IPR001388	89.06
KOG0860	116	consensus Synaptobrevin/VAMP-like protein [Intrace	80.01

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=100.00  E-value=6.1e-43  Score=370.86  Aligned_cols=369  Identities=19%  Similarity=0.271  Sum_probs=267.5

Q ss_pred             cccCCCCccCccccccCcccCCchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccCC---CCcCCchhHHHH
Q 009383           76 KRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRRE---PYGYSRTCYALS  152 (536)
Q Consensus        76 ~rt~R~Dpl~~fk~Y~gG~ni~n~hY~aSv~ftg~pg~via~lwfl~fgl~lL~~~~c~CCc~r~---~~~ys~~~~~~s  152 (536)
                      .+-+|-|-  .|++.++.|||+|+|||||++|+|+    +|++||+++|++++++++|+|||||+   +++|+++|+.|+
T Consensus        12 h~lPh~n~--~f~~v~~~F~p~~~~Y~~Sv~~~a~----iaavwlil~ll~ll~~~~~~CCcr~~~~~~k~~s~~c~~~s   85 (418)
T cd07912          12 HSLPHLNF--TFHRVNSTFNPEDEIYQQSLLILAS----IPAACLILSLLFLLVYLITRCCDRKPTEERPRHSICCLKWS   85 (418)
T ss_pred             HhCCCCCc--eEEecCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccHHHHH
Confidence            45678888  8999999999999999999999996    89999999999999999999999887   788999999999


Q ss_pred             HHHHHHHHHHHHHHhheeeccccccccchhhhHHHHHhhhhHHhHhHHhHHHHHHHhhhcCcccccc-------Ccchhh
Q 009383          153 LILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTL-------APDVQS  225 (536)
Q Consensus       153 lillilft~~aI~g~~vl~~Gn~~fh~~~~~~l~yvv~~an~tv~~l~nVt~~l~~ak~~~v~~~~l-------p~d~~~  225 (536)
                      ++++.++++++|++   +|+||+|||+++.++.+++ +++|+|+++++|++++++++-+.++++.+.       +...+.
T Consensus        86 LiiltL~~~aaIi~---~f~GN~~~h~gV~~t~~si-~~an~tv~~l~nqv~~l~~al~~t~~~~L~~L~~il~~~~~~~  161 (418)
T cd07912          86 LVIATLLCCAAIGV---GLYGNDETHDGVVQLTYSL-RNANHTVAGIDNQTSDTEASLNVTVEPQLTNLEDIFDARVNKT  161 (418)
T ss_pred             HHHHHHHHHHHHHH---HhhccHHHhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHhCCCcchh
Confidence            99998888775554   9999999999999999997 999999999999988887654444432111       111225


Q ss_pred             hHHHHHHHHHhhHHHHHHHHh---------hhHHHHHHhH---hhHHH----HHHHHHHHHHHHHHHHHHHHHhchhHHH
Q 009383          226 NIDKIDRKINSSATTLSYQTK---------KNSKDIKDAL---DSVGL----ALIIVAAVMLFLAFLGFLFSVFGLQCLV  289 (536)
Q Consensus       226 ~i~~~~~~Lns~a~~i~~k~~---------~n~~~I~~~l---~~vrl----~liiva~vmLlL~~lGlv~si~g~r~ll  289 (536)
                      +..++.++++++++++.+++.         .|.++|.+..   |.+||    +++++..++|+++++|++.   +.||.+
T Consensus       162 ~~~~~~~~~q~~~~n~~~~~~~~~~~~~~~~~l~~i~~~~~~~E~~Rw~~~l~lL~~~lviC~~~l~gl~r---~Sr~~l  238 (418)
T cd07912         162 DYLQIVQGLQQMATNAAQQLTGIPFWSLVGVSLTKLADQVSLYESYRWLAYLGLLSLLLVICLVLLVGLAR---HSRCLL  238 (418)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHH
Confidence            566777888888888775543         4555665443   34564    4455555555655555554   889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhhhhhCCCCCCCCCccccCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 009383          290 YFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDR  369 (536)
Q Consensus       290 ~~lvilgwilv~~tWil~Gv~l~l~~~vsDtCvAmdeyv~nPt~ntaL~~iLPCvd~~ta~~~l~~skev~~~lv~~vN~  369 (536)
                      ++++++|.+.++++|+++|+|++++++++|+|++||+|+.+.++.+ ++.                         +.+  
T Consensus       239 i~~s~~g~l~l~~~W~~~~~~l~~~v~~sDfC~~pd~yi~~~~~~~-~~~-------------------------di~--  290 (418)
T cd07912         239 IVFSVCGLFALIISWLSLGLYLASAVALSDFCVDPDDYVRNQTPSG-LSS-------------------------DIL--  290 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCHHHHHHhccccc-cch-------------------------HHH--
Confidence            9999999999999999999999999999999999999999887422 100                         001  


Q ss_pred             HHHHhhcccCCCCCccccccCCCCCCccccCCCCCCCCcccCCCCcccccchhhhhccceecCCCCCcccCCCccChhhH
Q 009383          370 IIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLH  449 (536)
Q Consensus       370 ~is~vsn~n~~~~~~~~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~~~~a~~v~~~~~C~~~~~~~C~t~gr~tp~~y  449 (536)
                                      -||.+..|..+   |||...++..     ...+.|..+.++...=..  -..+.+.   - +..
T Consensus       291 ----------------~yy~~C~~~~~---npF~~~l~~~-----~~~l~~~~~~~~~~~~~~--~~~~~~~---~-~~l  340 (418)
T cd07912         291 ----------------QYYLTCEPSTT---NPFQQRLTES-----QRALTNMQSQVQGLLREA--VFEFPTA---E-DNL  340 (418)
T ss_pred             ----------------HHHhcCCCCCC---CcchHhhHHH-----HHHHHHHHHHHHHHHHHh--cccCCcc---c-chH
Confidence                            15666655544   7777666432     223434433333222000  0011111   1 113


Q ss_pred             HHHHHHHHHHHHHHhhcccccccCCchhHHHHHhhcccCCCccHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009383          450 NQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVI  520 (536)
Q Consensus       450 ~q~~a~~n~~~~L~~~~P~l~~L~~C~fVr~~F~~I~~~~C~~l~~~~~~v~~gl~~~s~~~~l~~i~Wi~  520 (536)
                      .+++.-.|++...   .-.|+.++||.-+.+-+.+-...-|-+--.++-.+  .+..+-+|.+++++.|+.
T Consensus       341 ~~~~~~ln~~e~~---l~~l~a~ldCr~~h~~Y~~a~~g~C~~gl~Gl~~~--~l~s~~~a~~~~~lv~~~  406 (418)
T cd07912         341 LSLQGDLNSTEIN---LHQLTALLDCRGLHKDYVEALRGLCYDGLEGLLYL--LLFSLLAALLFTILVCVD  406 (418)
T ss_pred             HHHHHHHHHHHHH---HHHHHhhcchHHHHHHHHHHHHccccchHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence            3455555555444   45678899999999999999999998777665444  556666788888888743

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=100.00  E-value=1.5e-36  Score=323.40  Aligned_cols=361  Identities=20%  Similarity=0.285  Sum_probs=246.1

Q ss_pred             cccccCcccCCchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCcCCc---hhHHHHHHHHHHHHHHH
Q 009383           87 FHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSR---TCYALSLILLVFFTISA  163 (536)
Q Consensus        87 fk~Y~gG~ni~n~hY~aSv~ftg~pg~via~lwfl~fgl~lL~~~~c~CCc~r~~~~ys~---~~~~~slillilft~~a  163 (536)
                      |+..++.|+|+|+.|+||+++.|    .++++|+++..+++++|++|+|||||++++.++   +|.+|+++++.++++  
T Consensus         1 ~~~~~~~F~p~~~~Y~qsL~~la----~v~~~~l~l~Ll~ll~yl~~~CC~r~~~~~~~~~~~~c~~~~~~ia~lvc~--   74 (406)
T PF04906_consen    1 FQPVSSTFNPQDEEYQQSLLILA----SVAAACLALSLLFLLIYLICRCCCRRPREEKSSRRCCCLTWSLVIATLVCC--   74 (406)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCCcchHHHHHHHHHHHH--
Confidence            67889999999999999999999    467778766677788899999999886555443   499999887765555  


Q ss_pred             HHHhheeeccccccccchhhhHHHHHhhhhHHhHhHHh-HHHHHHHhhhcCccccccCc----chhhhHHHHHHHHHhhH
Q 009383          164 IVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQN-VSDYLAAAKTIGVNSVTLAP----DVQSNIDKIDRKINSSA  238 (536)
Q Consensus       164 I~g~~vl~~Gn~~fh~~~~~~l~yvv~~an~tv~~l~n-Vt~~l~~ak~~~v~~~~lp~----d~~~~i~~~~~~Lns~a  238 (536)
                       +|+++|||||+++|+|+ +.+.|.++++|+++.++++ ++++.+.++. .+++++...    +.++++.++.++++.++
T Consensus        75 -aaigvG~yGN~e~~~gv-~~~~~s~~~~n~t~~~i~~~v~~~~~~l~~-~v~~~l~~Le~~~~~~~~~~~~~~~~~~~~  151 (406)
T PF04906_consen   75 -AAIGVGFYGNSETNDGV-YQLIYSLRNANHTLSGIDNLVSDTTEALNS-TVEQHLTRLEEIFAKRTDLLQALQFLQQQA  151 (406)
T ss_pred             -HHHHcccccchhhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence             46689999999999995 8888899999999999999 5666666663 343332211    22455667777777777


Q ss_pred             HHHHHHHh---------hhHHHHHHhHhh---HHHHHH-HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Q 009383          239 TTLSYQTK---------KNSKDIKDALDS---VGLALI-IVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFI  305 (536)
Q Consensus       239 ~~i~~k~~---------~n~~~I~~~l~~---vrl~li-iva~vmLlL~~lGlv~si~g~r~ll~~lvilgwilv~~tWi  305 (536)
                      +++..++.         .+...+.+.++.   .||..+ .+..+++++++++++....+.||.++.+.++|++.++++|+
T Consensus       152 ~~v~~~l~~l~~~~~~~~~l~~~~~~~~~~E~yRw~~~~~lL~l~l~icl~~l~glar~Sk~~li~~~v~gll~lvisW~  231 (406)
T PF04906_consen  152 ENVVQQLDELPFWRNVSLSLEQLAEQVSFYEYYRWLAYLGLLILDLVICLLGLLGLARQSKCLLIVFSVLGLLALVISWI  231 (406)
T ss_pred             HHHHHHHhcCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEeeeccHHHHHHHHH
Confidence            77766655         344455544443   465432 22233334444443333458899999999999999999999


Q ss_pred             HHHHHHHHhhhccccccchhhhhhCCCCCCCCCccccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcc
Q 009383          306 LCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGI  385 (536)
Q Consensus       306 l~Gv~l~l~~~vsDtCvAmdeyv~nPt~ntaL~~iLPCvd~~ta~~~l~~skev~~~lv~~vN~~is~vsn~n~~~~~~~  385 (536)
                      +.|+++++++++||+|++||+|+.|-+.+....                          ++++                 
T Consensus       232 ~~g~~la~aV~~SDFC~~Pd~~i~~~~~~~~~~--------------------------di~~-----------------  268 (406)
T PF04906_consen  232 SLGLELAAAVGLSDFCVDPDTYILNQTQNETSA--------------------------DILQ-----------------  268 (406)
T ss_pred             HHHHHHHhccchhhhccCHHHHHHHhcccccch--------------------------hHHH-----------------
Confidence            999999999999999999999999987655211                          1111                 


Q ss_pred             ccccCCCCCCccccCCCCCCCCcccCCCCcccccchhhhhccceecCCCCCcccCCCccChhhHHHHHHHHHHHHHHHhh
Q 009383          386 VYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRY  465 (536)
Q Consensus       386 ~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~~~~a~~v~~~~~C~~~~~~~C~t~gr~tp~~y~q~~a~~n~~~~L~~~  465 (536)
                       ||...+|..+   |||.+.++.-+     -.+.++...+....-...  ..+-+.+    ..-.+++...|++   ..-
T Consensus       269 -YYl~C~~~~~---nPFqq~l~~~~-----~al~~~q~~~~~L~~~a~--~~fp~~~----~~l~~i~~~Ln~~---e~~  330 (406)
T PF04906_consen  269 -YYLTCSQSVS---NPFQQRLTSSQ-----RALSNMQSQVQGLLREAV--PLFPTAQ----EPLLAIQEDLNST---ERS  330 (406)
T ss_pred             -HhhcCCCCCC---CchHHHHHHHH-----HHHHHHHHHHHHHHHHHH--hhCCCcc----chHHHHHHHHHHH---HHH
Confidence             5555555544   77765543221     133344444433331110  0000000    1123344444444   344


Q ss_pred             cccccccCCchhHHHHHhhcccCCCccHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009383          466 GPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWV  519 (536)
Q Consensus       466 ~P~l~~L~~C~fVr~~F~~I~~~~C~~l~~~~~~v~~gl~~~s~~~~l~~i~Wi  519 (536)
                      ...++.++||.-+++.|.+..+.-|.+--.++-.++.  ..+-+|.++++++|+
T Consensus       331 l~~l~alldCr~lh~dY~~al~g~C~dg~eGl~~l~l--~sll~al~f~~~v~~  382 (406)
T PF04906_consen  331 LHQLTALLDCRGLHKDYVDALRGLCYDGLEGLLYLLL--FSLLAALLFSILVCV  382 (406)
T ss_pred             HHHHHhhcccccHHHHHHHHHHhhccchHhHHHHHHH--HHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999998877765  334455555556553

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=99.98  E-value=4.8e-30  Score=269.27  Aligned_cols=361  Identities=18%  Similarity=0.244  Sum_probs=242.3

Q ss_pred             ccCCCCccCccccccCcccCCchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccCC---CCcCCchhHHHHH
Q 009383           77 RTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRRE---PYGYSRTCYALSL  153 (536)
Q Consensus        77 rt~R~Dpl~~fk~Y~gG~ni~n~hY~aSv~ftg~pg~via~lwfl~fgl~lL~~~~c~CCc~r~---~~~ys~~~~~~sl  153 (536)
                      +-+|-|-  .|+.-+..|+++|++|+||+++.|..+.++.++.    .+++++|++|.|||||+   +..+..+|..|++
T Consensus        17 ~lP~~~~--~~~~tns~F~pe~~~Y~QaL~lla~l~aa~l~l~----Ll~ll~yli~~cC~Rr~~~~~~~~~~~c~s~~l   90 (526)
T KOG4433|consen   17 VLPHLNF--KLHPTNSVFRPEDSEYQQALLLLAALAAACLGLS----LLFLLFYLICRCCCRRETTGRKRRRVRCLSWSL   90 (526)
T ss_pred             cCCCCCc--eEeeccccCCCCcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCCccCCCCCCcceeeehH
Confidence            3457777  8888999999999999999999996554444444    55567778899999986   3445667999999


Q ss_pred             HHHHHHHHHHHHHhheeeccccccccchhhhHHHHHhhhhHHhHhHHh-HHHHHHHhhhcCccccccCc----chhhhHH
Q 009383          154 ILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQN-VSDYLAAAKTIGVNSVTLAP----DVQSNID  228 (536)
Q Consensus       154 illilft~~aI~g~~vl~~Gn~~fh~~~~~~l~yvv~~an~tv~~l~n-Vt~~l~~ak~~~v~~~~lp~----d~~~~i~  228 (536)
                      +++.++|+   +|+++|||||+++|+|+ .+..|..+++|+++.++++ ++++-+.+++ ..++.....    ...+++.
T Consensus        91 ~I~tl~cc---a~igvg~ygN~e~~~G~-~q~~~Sl~~an~tv~ti~~qv~~~~~~l~~-~~~~~l~~~~~n~t~~~~l~  165 (526)
T KOG4433|consen   91 IIATLMCC---AAIGVGFYGNSETSDGL-LQATYSLRHANHTVSTIDAQVSDTAEGLNN-TAEQLLETLEENLTARPELL  165 (526)
T ss_pred             HHHHHHHH---HHHheeeecCccccchH-HHHHHhhhhhcchhhHHHHHHHHHHHHHHH-HHHHHhhhHHhhhhhHHHHH
Confidence            98855555   58899999999999995 8888999999999999999 5777777765 344333322    2256688


Q ss_pred             HHHHHHHhhHHHHHHHHh---------hhHHHHHHhHhh---HHHHHHHH----HHHHHHHHHHHHHHHHhchhHHHHHH
Q 009383          229 KIDRKINSSATTLSYQTK---------KNSKDIKDALDS---VGLALIIV----AAVMLFLAFLGFLFSVFGLQCLVYFL  292 (536)
Q Consensus       229 ~~~~~Lns~a~~i~~k~~---------~n~~~I~~~l~~---vrl~liiv----a~vmLlL~~lGlv~si~g~r~ll~~l  292 (536)
                      ++.+.++..++.+..+++         ....++.+..+.   +||.-+++    ..|.|++.++|++.   +.||+++.|
T Consensus       166 ~~l~~vq~~~~~a~~~l~~~~~~~~~~~sl~~l~~~~~~yE~~RW~~~v~lL~l~LvvC~v~vlglak---~Skc~li~f  242 (526)
T KOG4433|consen  166 QALRRVQGNAETAVGQLSGLPFWRMVAVSLEKLAEQVDFYESYRWLAYVLLLTLLLVVCLVLVLGLAK---RSKCLLIVF  242 (526)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcccccCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchhhhHH
Confidence            888888888888777665         345666665554   57654333    33333444444444   789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccccchhhhhhCCCCCCCCCcccc----CCCchhhHHHHHHHHHHHHHHHHHHH
Q 009383          293 VILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILP----CVDNATAQETLKQTKTVTNQLVSVVD  368 (536)
Q Consensus       293 vilgwilv~~tWil~Gv~l~l~~~vsDtCvAmdeyv~nPt~ntaL~~iLP----Cvd~~ta~~~l~~skev~~~lv~~vN  368 (536)
                      .++|.+.++++|.+.|++++.+++++|||++||+|+.|.+.+---.+++-    |. ...+|+...+.+|.-.-+.+.=|
T Consensus       243 sv~Gll~lvisWl~~gl~la~sVa~sDFC~~Pd~y~~~~~~~~l~t~~~~~yl~c~-~t~~NpF~qrL~~sq~al~~~~~  321 (526)
T KOG4433|consen  243 SVCGLLALVISWLSLGLELASSVALSDFCVDPDDYVLNMVEEYLSTDILLYYLACS-PTHSNPFQQRLTESQRALNNMQS  321 (526)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHhhhhhhccChHHHHHHhhhcccchhHHhhhcccC-CCCCCchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998875441112221    22 23344444444333221111111


Q ss_pred             HHHHHhhcccCCCCCccccccCCCCCCccccCCCCCCCCcccCCCCcccccchhhhhccceecCCCCCcccCCCccChhh
Q 009383          369 RIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTL  448 (536)
Q Consensus       369 ~~is~vsn~n~~~~~~~~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~~~~a~~v~~~~~C~~~~~~~C~t~gr~tp~~  448 (536)
                      ++-    ....               |-   -|+.|+-                                       ...
T Consensus       322 ~va----~l~r---------------~~---v~~f~~~---------------------------------------q~~  340 (526)
T KOG4433|consen  322 QVA----GLLR---------------MA---VPLFPAA---------------------------------------QDP  340 (526)
T ss_pred             HHH----HHHH---------------hh---hhccccc---------------------------------------cCc
Confidence            111    1000               00   0111100                                       011


Q ss_pred             HHHHHHHHHHHHHHHhhcccccccCCchhHHHHHhhcccCCCccHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 009383          449 HNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFW  518 (536)
Q Consensus       449 y~q~~a~~n~~~~L~~~~P~l~~L~~C~fVr~~F~~I~~~~C~~l~~~~~~v~~gl~~~s~~~~l~~i~W  518 (536)
                      ...|...-|++-.+++   .|..+.||--+.+-|.+-..+-|-+=-.+  ++|.++..+=.|++++++.|
T Consensus       341 L~Av~~dLn~te~nl~---qLtAlvdCr~lH~dy~~AlrGlC~~gl~G--L~~lml~s~L~a~~lsilv~  405 (526)
T KOG4433|consen  341 LLAVQEDLNSTERNLH---QLTALVDCRSLHKDYVAALRGLCYDGLEG--LLYLMLFSFLTALALSILVC  405 (526)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHhhhhhHHHHHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHHHh
Confidence            2334444444444433   46779999999999999999999765444  34445555556677777764

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=98.43  E-value=7.4e-05  Score=87.19  Aligned_cols=61  Identities=23%  Similarity=0.456  Sum_probs=37.3

Q ss_pred             HHHHhhccccc--CC----CCcC---CchhHHHHHHHHHHHHHHHHHHhheeeccccccccchhhhHHHHHhh
Q 009383          128 CFMCLHYCCCR--RE----PYGY---SRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQ  191 (536)
Q Consensus       128 L~~~~c~CCc~--r~----~~~y---s~~~~~~slillilft~~aI~g~~vl~~Gn~~fh~~~~~~l~yvv~~  191 (536)
                      +++|||+||.+  ++    .+++   .|.++.+   ++++++++.++|.+..|..|+..++++.++.+.+-+.
T Consensus       112 ~~fCcCRCc~~CGg~~~~~~~~~~~c~R~~l~~---~L~~~~~~il~g~i~aF~~n~~l~~~v~~~~~~~~~~  181 (806)
T PF05478_consen  112 LCFCCCRCCGNCGGRMHQRDKKNDACRRGCLGI---LLLLLTLIILFGVICAFVANQQLSTGVDDTPNTVNST  181 (806)
T ss_pred             HHHhccccCCCcCCccccccccccccchHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            56777777633  21    1122   2334444   3445566666788899999999999987665554333

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=96.91  E-value=0.094  Score=57.11  Aligned_cols=10  Identities=30%  Similarity=0.511  Sum_probs=5.6

Q ss_pred             CCccccCCCc
Q 009383          337 LDDILPCVDN  346 (536)
Q Consensus       337 L~~iLPCvd~  346 (536)
                      ++..+.|...
T Consensus       290 ~~yy~~C~~~  299 (418)
T cd07912         290 LQYYLTCEPS  299 (418)
T ss_pred             HHHHhcCCCC
Confidence            5555666653

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>KOG4331 consensus Polytopic membrane protein Prominin [General function prediction only]

Probab=96.67  E-value=0.018  Score=66.24  Aligned_cols=82  Identities=13%  Similarity=0.175  Sum_probs=61.9

Q ss_pred             ChhhHHHHHHHHHHHHHHHhhc-ccccccCCchhHHHHHhhcccCCCccHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009383          445 TPTLHNQMASAVNVSYALYRYG-PFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYAR  523 (536)
Q Consensus       445 tp~~y~q~~a~~n~~~~L~~~~-P~l~~L~~C~fVr~~F~~I~~~~C~~l~~~~~~v~~gl~~~s~~~~l~~i~Wi~~~r  523 (536)
                      ++...+++..  +.+|-+..+. |..|++.+|+=+..+..+-+.--|.=..+-.+--|.|++...+-+.+++++-..-..
T Consensus       737 ~~~~~~~~~~--~~~~YI~wv~~e~~e~V~sCqPls~~l~~~~~~lC~~~iDPlN~fW~~il~c~~lliP~li~a~~l~~  814 (865)
T KOG4331|consen  737 PKPRLRRIKG--YISQYILWVQKEHLENVASCQPLSKILRENVVVLCGYIIDPLNLFWFCILFCTVLLIPSLIFAVKLPK  814 (865)
T ss_pred             ChHHHHHHHh--hHHHHHHHHHHHHHhhccccccHHHHHHhhhHhhhhhccCCccccchHHHHHHHHHHhHHHHHHHhhH
Confidence            3344455554  3444444444 888999999999888888888889988899999999999999999999999765554


Q ss_pred             cchhh
Q 009383          524 ERRHR  528 (536)
Q Consensus       524 ~~~~r  528 (536)
                      .-||+
T Consensus       815 ~y~rm  819 (865)
T KOG4331|consen  815 LYRRM  819 (865)
T ss_pred             hhhhh
Confidence            44433

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=96.27  E-value=0.2  Score=54.47  Aligned_cols=182  Identities=14%  Similarity=0.101  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccccc-CCC--Cc-CCchhHHHHHHHHHHHHHHHHHHhheeeccccccccchhhh---HHHH
Q 009383          116 AGIWFVVFGLSLCFMCLHYCCCR-REP--YG-YSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDT---LNYV  188 (536)
Q Consensus       116 a~lwfl~fgl~lL~~~~c~CCc~-r~~--~~-ys~~~~~~slillilft~~aI~g~~vl~~Gn~~fh~~~~~~---l~yv  188 (536)
                      .++.+ +|.+++++..||++..+ +++  +. ..+.+..+.-++......++..|=.=.-.|-.++..++.++   +.-+
T Consensus        30 l~l~L-l~ll~yl~~~CC~r~~~~~~~~~~~~c~~~~~~ia~lvc~aaigvG~yGN~e~~~gv~~~~~s~~~~n~t~~~i  108 (406)
T PF04906_consen   30 LALSL-LFLLIYLICRCCCRRPREEKSSRRCCCLTWSLVIATLVCCAAIGVGFYGNSETNDGVYQLIYSLRNANHTLSGI  108 (406)
T ss_pred             HHHHH-HHHHHHHHHHhhCCCCCccccccCCcchHHHHHHHHHHHHHHHHcccccchhhhccHHHHHHHHHHHHHHHHHH
Confidence            44443 35666666555555554 222  22 33444444444444444444555444455655555554444   4444


Q ss_pred             HhhhhHHhHhHHh-HHHHHHHhhhcCccccccCcchhhhHHHHHH---HHHhhHHHH---------HHHHhhhHHHHHHh
Q 009383          189 VKQAHITSESLQN-VSDYLAAAKTIGVNSVTLAPDVQSNIDKIDR---KINSSATTL---------SYQTKKNSKDIKDA  255 (536)
Q Consensus       189 v~~an~tv~~l~n-Vt~~l~~ak~~~v~~~~lp~d~~~~i~~~~~---~Lns~a~~i---------~~k~~~n~~~I~~~  255 (536)
                      -++.+++.+++.. +...++.++++    ...|.|....+.++++   .+..+++++         -+++.+..+.++..
T Consensus       109 ~~~v~~~~~~l~~~v~~~l~~Le~~----~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~~~~~l~~~~~~~~~~E~y  184 (406)
T PF04906_consen  109 DNLVSDTTEALNSTVEQHLTRLEEI----FAKRTDLLQALQFLQQQAENVVQQLDELPFWRNVSLSLEQLAEQVSFYEYY  184 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----hcccccHHHHHHHHHHHHHHHHHHHhcCcccccCCCCHHHHHHHHHHHHHH
Confidence            5666666666654 56566665543    2334444333333222   222222222         12444456666777


Q ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHH----hchhHHHHHHHHHHHHHHHH
Q 009383          256 LDSVGLALIIVAAVMLFLAFLGFLFSV----FGLQCLVYFLVILGWILVAG  302 (536)
Q Consensus       256 l~~vrl~liiva~vmLlL~~lGlv~si----~g~r~ll~~lvilgwilv~~  302 (536)
                      ....+++++++..+++++.++|++.-.    ...-.+-.+.+++.|++..+
T Consensus       185 Rw~~~~~lL~l~l~icl~~l~glar~Sk~~li~~~v~gll~lvisW~~~g~  235 (406)
T PF04906_consen  185 RWLAYLGLLILDLVICLLGLLGLARQSKCLLIVFSVLGLLALVISWISLGL  235 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEeeeccHHHHHHHHHHHHH
Confidence            777889999999999999999988732    22223334566677887654

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=93.80  E-value=1.3  Score=52.23  Aligned_cols=54  Identities=17%  Similarity=0.237  Sum_probs=45.7

Q ss_pred             ccccCCchhHHHHHhhcccCCCccHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009383          469 LVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYA  522 (536)
Q Consensus       469 l~~L~~C~fVr~~F~~I~~~~C~~l~~~~~~v~~gl~~~s~~~~l~~i~Wi~~~  522 (536)
                      -++...|.=+.+++...+.--|.-+...++-.|.|++.-+.-+++++++-+.-+
T Consensus       739 ~~~vg~C~Pl~~~~d~~~~~~C~~ivdp~N~fWf~l~~c~~~liP~ii~avkL~  792 (806)
T PF05478_consen  739 TNDVGRCQPLANIYDSAVVILCSRIVDPINGFWFGLGWCTLFLIPSIIFAVKLA  792 (806)
T ss_pred             HccCcCCccHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356778999999999888888999999999999999998888888888864433

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>PF00957 Synaptobrevin: Synaptobrevin; InterPro: IPR001388 Synaptobrevin is an intrinsic membrane protein of small synaptic vesicles [], specialised secretory organelles of neurons that actively accumulate neurotransmitters and participate in their calcium-dependent release by exocytosis

Probab=89.06  E-value=2.1  Score=36.24  Aligned_cols=20  Identities=5%  Similarity=0.250  Sum_probs=11.0

Q ss_pred             hhHHHHHHHHHhhHHHHHHH
Q 009383          225 SNIDKIDRKINSSATTLSYQ  244 (536)
Q Consensus       225 ~~i~~~~~~Lns~a~~i~~k  244 (536)
                      +.+++-.++|...|....++
T Consensus        34 ~~L~~kt~~L~~~a~~F~k~   53 (89)
T PF00957_consen   34 EELEDKTEELSDNAKQFKKN   53 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHH
Confidence            33444445666666665554

Vesicle function is mediated by proteins in their membranes, although the precise nature of the protein-protein interactions underlying this are still uncertain []. Synaptobrevin may play a role in the molecular events underlying neurotransmitter release and vesicle recycling and may be involved in the regulation of membrane flow in the nerve terminal, a process mediated by interaction with low molecular weight GTP-binding proteins []. Synaptic vesicle-associated membrane proteins (VAMPs) from Torpedo californica (Pacific electric ray) and SNC1 from yeast are related to synaptobrevin.; GO: 0016192 vesicle-mediated transport, 0016021 integral to membrane; PDB: 3EGX_C 2NUP_C 3EGD_C 2NUT_C 1IOU_A 1H8M_A 3B5N_A 3ZYM_A 2NPS_A 1SFC_E ....

>KOG0860 consensus Synaptobrevin/VAMP-like protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=80.01  E-value=19  Score=32.66  Aligned_cols=33  Identities=12%  Similarity=0.192  Sum_probs=21.3

Q ss_pred             CccccccCcchhhhHHHHHHHHHhhHHHHHHHH
Q 009383          213 GVNSVTLAPDVQSNIDKIDRKINSSATTLSYQT  245 (536)
Q Consensus       213 ~v~~~~lp~d~~~~i~~~~~~Lns~a~~i~~k~  245 (536)
                      .|++++.+.+-.+.|++-.++|+.+|+...+.+
T Consensus        48 NV~KVlER~ekL~~L~drad~L~~~as~F~~~A   80 (116)
T KOG0860|consen   48 NVEKVLERGEKLDELDDRADQLQAGASQFEKTA   80 (116)
T ss_pred             hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444445566777788998888887663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	536
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 80/572 (13%), Positives = 150/572 (26%), Gaps = 206/572 (36%)

Query: 27  RQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRYLAE-EPTDNSTL---------ILAEK 76
           R  + +   + ++  V   +         KL++ L E  P  N  +          +A  
Sbjct: 118 RLYNDNQVFAKYN--VSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169

Query: 77  RTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIW--FVVFGLSLCFMCLHY 134
                                 K +W ++    +P  ++  +         +      H 
Sbjct: 170 VCLSYKVQCKM---------DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 135 CCCRREPYGY-----------SRTCYALSLILL--VF-------FTISAIVGCIVLYTGQ 174
                                    Y   L++L  V        F +     C +L T +
Sbjct: 221 S---NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL----SCKILLTTR 273

Query: 175 GKFHSSTLDTLNYVVKQAHITSESLQNV--SDYLAA--AKTIGVNSVTLAPDV------- 223
            K      D L+      HI+ +        D + +   K +      L  +V       
Sbjct: 274 FK---QVTDFLS-AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329

Query: 224 -------------------QSNIDKIDRKINSSATTLS-YQTKKNSKDI----KDAL--D 257
                                N DK+   I SS   L   + +K    +      A    
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT 389

Query: 258 SVGLALI----IVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLL- 312
            + L+LI    I + VM+ +            +   Y LV         T  +  I+L  
Sbjct: 390 IL-LSLIWFDVIKSDVMVVVN-----------KLHKYSLVEKQP--KESTISIPSIYLEL 435

Query: 313 ---------LHNVVADTCVSMDEWVKNPTAHTALDDILPCVDN----------ATAQETL 353
                    LH  + D       +  +       D I P +D              +   
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSD-------DLIPPYLDQYFYSHIGHHLKNIEHP- 487

Query: 354 KQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVY----YNQSGPLLPVLCNPFNSDLTNR 409
                   + +++   + ++     FL +  I +    +N SG +L  L       L   
Sbjct: 488 --------ERMTLFRMVFLDF---RFL-EQKIRHDSTAWNASGSILNTL-----QQL--- 527

Query: 410 QCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFL 469
                        + +K YIC            RL   + +                 FL
Sbjct: 528 -------------KFYKPYICD-----NDPKYERLVNAILD-----------------FL 552

Query: 470 VNLQDCTFVRDTFTDISRDHCPGLQRHSKWIY 501
             +++   +   +TD+ R     L    + I+
Sbjct: 553 PKIEE-NLICSKYTDLLR---IALMAEDEAIF 580

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	536
3hd7_A	91	Vesicle-associated membrane protein 2; membrane pr	80.12

>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A

Probab=80.12  E-value=4.9  Score=33.51  Aligned_cols=20  Identities=15%  Similarity=0.287  Sum_probs=11.3

Q ss_pred             hhHHHHHHHHHhhHHHHHHH
Q 009383          225 SNIDKIDRKINSSATTLSYQ  244 (536)
Q Consensus       225 ~~i~~~~~~Lns~a~~i~~k  244 (536)
                      +.+++-.++|++.|....++
T Consensus        36 ~~L~~kt~~L~~~s~~F~~~   55 (91)
T 3hd7_A           36 SELDDRADALQAGASQFETS   55 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            34444456666666665554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00