Citrus Sinensis ID: 010020

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
ccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHccHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccc
ccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccccccHHHHHHHHcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccHHHcEEcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHccHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHcccccHHHHHHHcHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccc
meslvsassrtqllfspaAVLFNQAATHSLRSSLsfnytysaepkhkTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISydkalykhdimgsKAHASMLAkqglisdsdknsiLRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIigepakklhtarsrndqvLTDFRLWCRDAIDTIVRSIQRLQVALVKLALkneglivpgythlqRAQPVLLQHLLLAYVEQLERDAGRLQDcrvrmnfcplgacalagtglpidrfmTAEAleftapmrnsidavsdRDFVLEFLSANSIIAIHLSRLGEEWVLWASeefgfitpsdsvstgssimpqkknpdpmelvrgksaRVIGDLVTLLTLckglplaynrdlqedkeptfdSVKTIVGMLEVSAEFAQNITFNVERIKKalpagyldatTLADYLvnkqvpfrtshdiVGKAVALCVSkecqlqdlsldemrslnpvfdkdvyEYLGVENAIRKFssfgstgsacVTEQLHSWVAKlginrssc
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKqglisdsdknSILRGLDEIERQIEAGkfmwrtdreDVHMNIEAALTDIIGEPAKKlhtarsrndqvltdFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPlaynrdlqedkePTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSwvaklginrssc
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
************LLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHA*ML*************ILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT***************************SARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI*****
*************LFSPAAVLF*******************************************FEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI*****
**********TQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD**************PDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
****VSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPK****************W**RFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query520 2.2.26 [Sep-21-2011]
Q6AR60464 Argininosuccinate lyase O yes no 0.873 0.978 0.524 1e-138
Q5FPK5481 Argininosuccinate lyase O yes no 0.871 0.941 0.522 1e-133
Q2LT96472 Argininosuccinate lyase O yes no 0.871 0.959 0.512 1e-132
B8GSV2467 Argininosuccinate lyase O yes no 0.873 0.972 0.522 1e-132
Q3JDS2467 Argininosuccinate lyase O yes no 0.873 0.972 0.528 1e-131
B0VDE4477 Argininosuccinate lyase O yes no 0.840 0.916 0.538 1e-130
B7I338477 Argininosuccinate lyase O yes no 0.840 0.916 0.538 1e-130
B7H1L9477 Argininosuccinate lyase O yes no 0.840 0.916 0.538 1e-130
Q609I6465 Argininosuccinate lyase O yes no 0.859 0.961 0.532 1e-130
B0VMC7477 Argininosuccinate lyase O yes no 0.840 0.916 0.536 1e-130
>sp|Q6AR60|ARLY_DESPS Argininosuccinate lyase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=argH PE=3 SV=1 Back     alignment and function desciption
 Score =  492 bits (1267), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/454 (52%), Positives = 306/454 (67%)

Query: 53  MSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSD 112
           M+  K  KLWGGRF E++  +VEKF+ESISYD  LYK+DI GSKAHA+ML+ QG+IS  +
Sbjct: 1   MTEQKSKKLWGGRFSEAMAASVEKFSESISYDVRLYKYDIAGSKAHATMLSSQGIISPEE 60

Query: 113 KNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLT 172
              I+ GL  IE  IEAG F ++T+ EDVHMNIE AL D IG    +LH ARSRNDQ+  
Sbjct: 61  LEQIIAGLSSIEADIEAGVFEFKTEYEDVHMNIEQALVDRIGAAGSRLHAARSRNDQIAL 120

Query: 173 DFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQ 232
           DF+++ RD  D +V  +     A   +  K  G I+PGYTH QRAQPVL+ H +LAY E 
Sbjct: 121 DFKMYLRDQCDHLVELLDGACRAFTVVGRKYLGDIMPGYTHTQRAQPVLITHHMLAYYEM 180

Query: 233 LERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 292
             RD  R+ DCR R+N  PLG  A+AGTGLPI+R   A+AL F     NS+D  +DRD+ 
Sbjct: 181 FRRDRDRILDCRKRLNLSPLGCAAMAGTGLPINREQVAKALGFAGVTANSMDTSADRDYA 240

Query: 293 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGK 352
           +E  S  ++I +HLSRL EE V W++ E+ F+  SDS  TGSSIMPQKKNPD  EL+RGK
Sbjct: 241 IELTSCLTMIQLHLSRLAEELVTWSTSEYKFVDISDSFCTGSSIMPQKKNPDIAELIRGK 300

Query: 353 SARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVER 412
           S RV+G L++L+T+ KGLPL YNRD QEDKEP FD++ T+   L ++AE   ++ FN  R
Sbjct: 301 SGRVVGSLISLITMMKGLPLTYNRDQQEDKEPVFDAIDTVSASLSITAEMMAHMKFNTAR 360

Query: 413 IKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNP 472
             +A   G++ AT LADYLV K VPFR +H IVG AVA C++K C+L DL+L EM+  +P
Sbjct: 361 CAEATETGFITATDLADYLVMKDVPFRQAHHIVGSAVAACIAKGCELPDLTLTEMQEFSP 420

Query: 473 VFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 506
           V + DV+  L  E ++    S G TG   VTE L
Sbjct: 421 VIESDVFAVLTAEGSVNSRVSTGGTGLVRVTEAL 454

Desulfotalea psychrophila (strain LSv54 / DSM 12343) (taxid: 177439)
EC: 4EC: .EC: 3EC: .EC: 2EC: .EC: 1
>sp|Q5FPK5|ARLY_GLUOX Argininosuccinate lyase OS=Gluconobacter oxydans (strain 621H) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q2LT96|ARLY_SYNAS Argininosuccinate lyase OS=Syntrophus aciditrophicus (strain SB) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B8GSV2|ARLY_THISH Argininosuccinate lyase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q3JDS2|ARLY_NITOC Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B0VDE4|ARLY_ACIBY Argininosuccinate lyase OS=Acinetobacter baumannii (strain AYE) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B7I338|ARLY_ACIB5 Argininosuccinate lyase OS=Acinetobacter baumannii (strain AB0057) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B7H1L9|ARLY_ACIB3 Argininosuccinate lyase OS=Acinetobacter baumannii (strain AB307-0294) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q609I6|ARLY_METCA Argininosuccinate lyase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B0VMC7|ARLY_ACIBS Argininosuccinate lyase OS=Acinetobacter baumannii (strain SDF) GN=argH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
225459083525 PREDICTED: argininosuccinate lyase [Viti 0.986 0.977 0.789 0.0
255545970481 argininosuccinate lyase, putative [Ricin 0.898 0.970 0.850 0.0
302142068478 unnamed protein product [Vitis vinifera] 0.886 0.964 0.856 0.0
449436950523 PREDICTED: argininosuccinate lyase-like 0.923 0.917 0.813 0.0
357465245472 Argininosuccinate lyase [Medicago trunca 0.882 0.972 0.843 0.0
356515726516 PREDICTED: argininosuccinate lyase-like 0.878 0.885 0.846 0.0
356508027512 PREDICTED: argininosuccinate lyase-like 0.878 0.892 0.846 0.0
449469785487 PREDICTED: argininosuccinate lyase-like 0.892 0.952 0.810 0.0
388511499517 unknown [Medicago truncatula] 0.907 0.912 0.810 0.0
224067080461 predicted protein [Populus trichocarpa] 0.880 0.993 0.832 0.0
>gi|225459083|ref|XP_002283809.1| PREDICTED: argininosuccinate lyase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/523 (78%), Positives = 451/523 (86%), Gaps = 10/523 (1%)

Query: 1   MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNY-------TYSAEPKHKTVLCKM 53
           MESL S SS  QL   P+ +  N   T   R+S++F +       T S+  K        
Sbjct: 1   MESLAS-SSTVQLQSPPSGLSIN--TTPKPRNSVTFKHRSKQVWCTSSSTMKTSATDPST 57

Query: 54  SASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDK 113
             +KE KLWGGRFEE VTDAVE+FTESIS+DKALYK DIMGS+AHASMLA QGLIS SD+
Sbjct: 58  KKAKEAKLWGGRFEEGVTDAVERFTESISFDKALYKQDIMGSRAHASMLAHQGLISVSDR 117

Query: 114 NSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTD 173
           +SIL+GLD IER+IE G+F+WRTDREDVHMNIEAALTD+IGEPAKKLHTARSRNDQVLTD
Sbjct: 118 DSILQGLDNIERRIEDGEFVWRTDREDVHMNIEAALTDLIGEPAKKLHTARSRNDQVLTD 177

Query: 174 FRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQL 233
           FRLWCRDAID IV  I+ LQVALV LA+KNE LIVPGYTHLQRAQP+LLQHLLLAYVEQL
Sbjct: 178 FRLWCRDAIDNIVARIEHLQVALVTLAMKNENLIVPGYTHLQRAQPILLQHLLLAYVEQL 237

Query: 234 ERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 293
           +RDAGRL DCR R+NFCPLGACALAGTGLPIDRFMT+  L F APMRNSIDAVSDRDFVL
Sbjct: 238 DRDAGRLLDCRQRLNFCPLGACALAGTGLPIDRFMTSHDLGFNAPMRNSIDAVSDRDFVL 297

Query: 294 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKS 353
           EFLSANSI AIHLSRLGEEWVLWASEEFGF+TPSDSVSTGSSIMPQKKNPDPMELVRGKS
Sbjct: 298 EFLSANSITAIHLSRLGEEWVLWASEEFGFLTPSDSVSTGSSIMPQKKNPDPMELVRGKS 357

Query: 354 ARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERI 413
           ARV+GDLVTLL LCKGLP AYNRDLQEDKEPTFDS KTI+GMLEV AEFAQNITFN E+I
Sbjct: 358 ARVVGDLVTLLVLCKGLPHAYNRDLQEDKEPTFDSTKTIIGMLEVCAEFAQNITFNREKI 417

Query: 414 KKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPV 473
           KKALPAG+LDATTLADYLV K +PFRTSHDIVGK+VALCVSK CQLQDLSLDE+RS+NPV
Sbjct: 418 KKALPAGHLDATTLADYLVKKGIPFRTSHDIVGKSVALCVSKNCQLQDLSLDELRSVNPV 477

Query: 474 FDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN 516
           FD+DVYE+LGVENA++KF S+GSTGS CV EQL  WV KL IN
Sbjct: 478 FDEDVYEFLGVENAVKKFCSYGSTGSECVAEQLDFWVTKLQIN 520

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255545970|ref|XP_002514045.1| argininosuccinate lyase, putative [Ricinus communis] gi|223547131|gb|EEF48628.1| argininosuccinate lyase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|302142068|emb|CBI19271.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449436950|ref|XP_004136255.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] gi|449526427|ref|XP_004170215.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357465245|ref|XP_003602904.1| Argininosuccinate lyase [Medicago truncatula] gi|355491952|gb|AES73155.1| Argininosuccinate lyase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356515726|ref|XP_003526549.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|356508027|ref|XP_003522764.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|449469785|ref|XP_004152599.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] gi|449524625|ref|XP_004169322.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388511499|gb|AFK43811.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224067080|ref|XP_002302345.1| predicted protein [Populus trichocarpa] gi|222844071|gb|EEE81618.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
TAIR|locus:2183825517 AT5G10920 [Arabidopsis thalian 0.888 0.893 0.822 3e-204
TIGR_CMR|GSU_0156458 GSU_0156 "argininosuccinate ly 0.871 0.989 0.498 9.1e-116
TIGR_CMR|ECH_0937470 ECH_0937 "argininosuccinate ly 0.857 0.948 0.501 1.1e-112
TIGR_CMR|SPO_0332463 SPO_0332 "argininosuccinate ly 0.865 0.971 0.507 1.4e-112
TIGR_CMR|BA_4879462 BA_4879 "argininosuccinate lya 0.844 0.950 0.501 5.3e-111
TIGR_CMR|CHY_2259456 CHY_2259 "argininosuccinate ly 0.861 0.982 0.495 6.1e-110
TIGR_CMR|DET_1261461 DET_1261 "argininosuccinate ly 0.848 0.956 0.488 6.5e-106
POMBASE|SPBC1773.14461 arg7 "argininosuccinate lyase" 0.869 0.980 0.441 6.4e-99
POMBASE|SPBC1539.03c460 SPBC1539.03c "argininosuccinat 0.869 0.982 0.437 1.7e-98
UNIPROTKB|P24058468 ASL2 "Argininosuccinate lyase" 0.869 0.965 0.434 6.6e-97
TAIR|locus:2183825 AT5G10920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1976 (700.6 bits), Expect = 3.0e-204, P = 3.0e-204
 Identities = 380/462 (82%), Positives = 418/462 (90%)

Query:    54 SASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDK 113
             +ASKEVKLWGGRFEESVT+ VEKFTESIS+DK LYK DIMGSKAHASMLA QGLI+DSDK
Sbjct:    53 TASKEVKLWGGRFEESVTEKVEKFTESISFDKVLYKQDIMGSKAHASMLAHQGLITDSDK 112

Query:   114 NSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTD 173
             +SILRGLD+IERQIEA KF WRTDREDVHMNIEAALTD+IGEPAKKLHTARSRNDQV TD
Sbjct:   113 DSILRGLDDIERQIEANKFEWRTDREDVHMNIEAALTDLIGEPAKKLHTARSRNDQVATD 172

Query:   174 FRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQL 233
             FRLWCRDAIDTI+  I+ LQ ALV+LALKNE LIVPGYTHLQRAQPVLL H+LL +VEQL
Sbjct:   173 FRLWCRDAIDTIIVKIRNLQRALVELALKNEALIVPGYTHLQRAQPVLLPHVLLTFVEQL 232

Query:   234 ERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 293
             ERDAGR  DCR R+NF PLGACALAGTGLPIDRFMTA AL FT PMRNSIDAVSDRDFVL
Sbjct:   233 ERDAGRYVDCRARLNFSPLGACALAGTGLPIDRFMTANALGFTEPMRNSIDAVSDRDFVL 292

Query:   294 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKS 353
             EFL  N+   IHLSRLGEEWVLWASEEFGF+TPSDSVSTGSSIMPQKKNPDPMELVRGKS
Sbjct:   293 EFLYTNANTGIHLSRLGEEWVLWASEEFGFMTPSDSVSTGSSIMPQKKNPDPMELVRGKS 352

Query:   354 ARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERI 413
             ARVIGDLVT+LTLCKGLPLAYNRD QEDKEP FDS KTI+GM++VSAEFAQN+TFN +RI
Sbjct:   353 ARVIGDLVTVLTLCKGLPLAYNRDFQEDKEPMFDSTKTIMGMIDVSAEFAQNVTFNEDRI 412

Query:   414 KKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPV 473
             KK+LPAG+LDATTLADYLV K +PFR+SHDIVGK V +CVSK C+LQ+LSL+EM+ L+PV
Sbjct:   413 KKSLPAGHLDATTLADYLVKKGMPFRSSHDIVGKLVGVCVSKGCELQNLSLEEMKKLSPV 472

Query:   474 FDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 515
             F++DV+ +LGVEN++ KFSS+GSTGS CV EQL  WV KL I
Sbjct:   473 FEEDVFGFLGVENSVNKFSSYGSTGSNCVAEQLGYWVNKLNI 514
GO:0003824 "catalytic activity" evidence=IEA
GO:0004056 "argininosuccinate lyase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0042450 "arginine biosynthetic process via ornithine" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
TIGR_CMR|GSU_0156 GSU_0156 "argininosuccinate lyase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0937 ECH_0937 "argininosuccinate lyase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0332 SPO_0332 "argininosuccinate lyase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4879 BA_4879 "argininosuccinate lyase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2259 CHY_2259 "argininosuccinate lyase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1261 DET_1261 "argininosuccinate lyase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
POMBASE|SPBC1773.14 arg7 "argininosuccinate lyase" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPBC1539.03c SPBC1539.03c "argininosuccinate lyase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|P24058 ASL2 "Argininosuccinate lyase" [Anas platyrhynchos (taxid:8839)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7VEK0ARLY_PROMA4, ., 3, ., 2, ., 10.51440.86530.9740yesno
Q6FFB2ARLY_ACIAD4, ., 3, ., 2, ., 10.52130.85380.9308yesno
Q8DLW0ARLY_THEEB4, ., 3, ., 2, ., 10.50440.85570.9611yesno
B7V5F3ARLY_PSEA84, ., 3, ., 2, ., 10.54150.85570.9590yesno
Q2SQ67ARLY_HAHCH4, ., 3, ., 2, ., 10.52160.84420.9380yesno
B1J1V0ARLY_PSEPW4, ., 3, ., 2, ., 10.52660.86530.9698yesno
C1D665ARLY_LARHH4, ., 3, ., 2, ., 10.51420.8750.9869yesno
B0VDE4ARLY_ACIBY4, ., 3, ., 2, ., 10.53880.84030.9161yesno
A1B3M0ARLY_PARDP4, ., 3, ., 2, ., 10.50320.87300.9680yesno
C3K426ARLY_PSEFS4, ., 3, ., 2, ., 10.53110.86530.9698yesno
B8GSV2ARLY_THISH4, ., 3, ., 2, ., 10.52200.87300.9721yesno
Q5FPK5ARLY_GLUOX4, ., 3, ., 2, ., 10.52200.87110.9417yesno
C6BTR8ARLY_DESAD4, ., 3, ., 2, ., 10.49560.87110.9847yesno
Q02EA0ARLY_PSEAB4, ., 3, ., 2, ., 10.54150.85570.9590yesno
Q3JDS2ARLY_NITOC4, ., 3, ., 2, ., 10.52860.87300.9721yesno
A4XNY5ARLY_PSEMY4, ., 3, ., 2, ., 10.54150.85570.9590yesno
Q4K3X1ARLY_PSEF54, ., 3, ., 2, ., 10.52660.86530.9698yesno
P59618ARLY_PSEPK4, ., 3, ., 2, ., 10.52880.86530.9698yesno
B9M377ARLY_GEOSF4, ., 3, ., 2, ., 10.50780.85960.9759yesno
Q6AR60ARLY_DESPS4, ., 3, ., 2, ., 10.52420.87300.9784yesno
A5GDA7ARLY_GEOUR4, ., 3, ., 2, ., 10.50980.87110.9890yesno
B5ED16ARLY_GEOBB4, ., 3, ., 2, ., 10.51700.84420.9585yesno
A3PMB7ARLY_RHOS14, ., 3, ., 2, ., 10.50100.87300.9639yesno
Q2RXE3ARLY_RHORT4, ., 3, ., 2, ., 10.51820.84030.9142yesno
Q3IZY2ARLY_RHOS44, ., 3, ., 2, ., 10.50100.87300.9639yesno
B0KH03ARLY_PSEPG4, ., 3, ., 2, ., 10.52660.86530.9698yesno
Q609I6ARLY_METCA4, ., 3, ., 2, ., 10.53240.85960.9612yesno
Q72GZ4ARLY_THET24, ., 3, ., 2, ., 10.50320.87880.9891yesno
A1ATU1ARLY_PELPD4, ., 3, ., 2, ., 10.51650.86340.9803yesno
Q2LT96ARLY_SYNAS4, ., 3, ., 2, ., 10.51210.87110.9597yesno
B3E9X6ARLY_GEOLS4, ., 3, ., 2, ., 10.51000.85960.9759yesno
B2I1W9ARLY_ACIBC4, ., 3, ., 2, ., 10.53650.84030.9161yesno
Q5P7H3ARLY_AROAE4, ., 3, ., 2, ., 10.50890.86150.9634yesno
Q39Z69ARLY_GEOMG4, ., 3, ., 2, ., 10.50430.87300.9912yesno
Q5SLL0ARLY_THET84, ., 3, ., 2, ., 10.50100.87880.9891yesno
A4WVB9ARLY_RHOS54, ., 3, ., 2, ., 10.49670.88840.9808yesno
Q98G36ARLY1_RHILO4, ., 3, ., 2, ., 10.49010.87300.9742yesno
Q3K4S8ARLY2_PSEPF4, ., 3, ., 2, ., 10.52880.86530.9698yesno
B0VMC7ARLY_ACIBS4, ., 3, ., 2, ., 10.53650.84030.9161yesno
C1DJ48ARLY_AZOVD4, ., 3, ., 2, ., 10.53550.86530.9698yesno
Q67S72ARLY_SYMTH4, ., 3, ., 2, ., 10.51230.85960.9696yesno
P50987ARLY_PSEAE4, ., 3, ., 2, ., 10.54150.85570.9590yesno
B7I338ARLY_ACIB54, ., 3, ., 2, ., 10.53880.84030.9161yesno
Q30YB9ARLY_DESDG4, ., 3, ., 2, ., 10.51230.85960.9717yesno
C6E6Y9ARLY_GEOSM4, ., 3, ., 2, ., 10.51480.84420.9585yesno
Q74GT9ARLY_GEOSL4, ., 3, ., 2, ., 10.49890.87110.9890yesno
B7H1L9ARLY_ACIB34, ., 3, ., 2, ., 10.53880.84030.9161yesno
A6VE40ARLY_PSEA74, ., 3, ., 2, ., 10.53930.85570.9590yesno
Q8FYA4ARLY_BRUSU4, ., 3, ., 2, ., 10.49010.87300.9742yesno
A5D4Y2ARLY_PELTS4, ., 3, ., 2, ., 10.52130.85570.9673yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.2.10.914
3rd Layer4.3.20.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 0.0
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 0.0
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 0.0
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 0.0
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 0.0
PRK04833455 PRK04833, PRK04833, argininosuccinate lyase; Provi 1e-163
PRK12308 614 PRK12308, PRK12308, bifunctional argininosuccinate 1e-160
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 1e-128
pfam00206312 pfam00206, Lyase_1, Lyase 7e-79
PRK02186887 PRK02186, PRK02186, argininosuccinate lyase; Provi 2e-60
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 3e-56
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provi 8e-43
PRK06389434 PRK06389, PRK06389, argininosuccinate lyase; Provi 2e-31
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 5e-21
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 6e-21
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 5e-17
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 6e-17
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 9e-17
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 5e-15
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 6e-14
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 4e-13
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 6e-13
cd01357450 cd01357, Aspartase, Aspartase 4e-12
PRK14515479 PRK14515, PRK14515, aspartate ammonia-lyase; Provi 7e-12
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 1e-10
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 1e-10
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 4e-10
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 3e-09
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provision 1e-08
COG0114462 COG0114, FumC, Fumarase [Energy production and con 2e-08
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 1e-07
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 3e-06
cd01362455 cd01362, Fumarase_classII, Class II fumarases 3e-05
PRK08470442 PRK08470, PRK08470, adenylosuccinate lyase; Provis 6e-05
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 6e-05
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisiona 2e-04
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provis 7e-04
PRK07492435 PRK07492, PRK07492, adenylosuccinate lyase; Provis 0.002
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 0.002
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information 
 Score =  882 bits (2282), Expect = 0.0
 Identities = 365/463 (78%), Positives = 403/463 (87%)

Query: 55  ASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKN 114
           A+KE KLWGGRFEE VT AVEKF ESIS+DK LYK DIMGSKAHASMLAKQG+I+D D++
Sbjct: 12  AAKEKKLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLAKQGIITDEDRD 71

Query: 115 SILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDF 174
           SIL GLDEIE++IEAGKF WR DREDVHMN EA LT++IGEPAKKLHTARSRNDQV TD 
Sbjct: 72  SILDGLDEIEKEIEAGKFEWRPDREDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDT 131

Query: 175 RLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLE 234
           RLWCRDAID I + I+ LQVALV+LA KN  L+VPGYTHLQRAQPVLL H LL++VEQLE
Sbjct: 132 RLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLE 191

Query: 235 RDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLE 294
           RDAGRL DCR R+NFCPLG+CALAGTGLPIDRFMTA+ L FTAPMRNSIDAVSDRDFVLE
Sbjct: 192 RDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVLE 251

Query: 295 FLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSA 354
           FL ANSI AIHLSRLGEEWVLWASEEFGF+TPSD+VSTGSSIMPQKKNPDPMELVRGKSA
Sbjct: 252 FLFANSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSA 311

Query: 355 RVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIK 414
           RVIGDLVT+L LCKGLP AYNRDLQEDKEP FDSV T+  MLEV+ EFAQNITFN ERIK
Sbjct: 312 RVIGDLVTVLALCKGLPTAYNRDLQEDKEPLFDSVDTVSDMLEVATEFAQNITFNPERIK 371

Query: 415 KALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF 474
           K+LPAG LDATTLADYLV K VPFR +H IVG AVAL  SK C+L DL+L++++S+NPVF
Sbjct: 372 KSLPAGMLDATTLADYLVRKGVPFRETHHIVGAAVALAESKGCELSDLTLEDLKSINPVF 431

Query: 475 DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 517
           ++DVYE LGVEN++ KF S+GSTGS  V EQL  W  KL I  
Sbjct: 432 EEDVYEVLGVENSVEKFDSYGSTGSRSVLEQLEKWRTKLEITS 474

Length = 474
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|235010 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|237743 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|236352 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 520
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
PLN02646474 argininosuccinate lyase 100.0
KOG1316464 consensus Argininosuccinate lyase [Amino acid tran 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
TIGR00838455 argH argininosuccinate lyase. This model describes 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
PRK12273472 aspA aspartate ammonia-lyase; Provisional 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK14515479 aspartate ammonia-lyase; Provisional 100.0
PRK07492435 adenylosuccinate lyase; Provisional 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
TIGR00928435 purB adenylosuccinate lyase. This family consists 100.0
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
PLN02848458 adenylosuccinate lyase 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
KOG1317487 consensus Fumarase [Energy production and conversi 100.0
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 100.0
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 100.0
PRK08937216 adenylosuccinate lyase; Provisional 100.0
PF1469870 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1 99.49
PF1039781 ADSL_C: Adenylosuccinate lyase C-terminus; InterPr 99.0
PF08328115 ASL_C: Adenylosuccinate lyase C-terminal; InterPro 97.63
PF1041555 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR0 96.78
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 94.49
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-113  Score=889.46  Aligned_cols=457  Identities=56%  Similarity=0.826  Sum_probs=450.0

Q ss_pred             ccccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccC
Q 010020           58 EVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTD  137 (520)
Q Consensus        58 ~~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~  137 (520)
                      .+++|||||++.+++.+..|+.+..+|++|+.++|.+++||+.||.+.|+|+++++++|.++|.+|.+++..+.|.+++.
T Consensus         2 ~~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~   81 (459)
T COG0165           2 SNKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPD   81 (459)
T ss_pred             CCCCCCCCccCCCcHHHHHHhccchhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCc
Confidence            35799999999999999999999999999999999999999999999999999999999999999999988888999999


Q ss_pred             CCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCc
Q 010020          138 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA  217 (520)
Q Consensus       138 ~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A  217 (520)
                      .||+|+++|++|++++|+.|+++|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+|+||||||+|+|
T Consensus        82 ~EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~A  161 (459)
T COG0165          82 DEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRA  161 (459)
T ss_pred             cccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHH
Q 010020          218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS  297 (520)
Q Consensus       218 ~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~  297 (520)
                      ||+|||||+.+|++.|.||++||.++++|++.+|||+||++||++|+||+++|++|||+.+..||+|++++||+++|+++
T Consensus       162 QPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~  241 (459)
T COG0165         162 QPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLS  241 (459)
T ss_pred             CcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccc
Q 010020          298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD  377 (520)
Q Consensus       298 ~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD  377 (520)
                      ++++++.+|||||+|+++|+|+|||+|++|+++++|||||||||||+++|++|++++++.|.+.+++++++++|++||||
T Consensus       242 ~~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrD  321 (459)
T COG0165         242 AAALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRD  321 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCC
Q 010020          378 LQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKEC  457 (520)
Q Consensus       378 ~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~  457 (520)
                      +|++++.+++++..+..+|..+..++++|+||+++|++.+..||++||++|++||++|+|||+||++|+++|+.+.+.|+
T Consensus       322 lQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~  401 (459)
T COG0165         322 LQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAEERGK  401 (459)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhh
Q 010020          458 QLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG  514 (520)
Q Consensus       458 ~l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~  514 (520)
                      ++.++..++++.+...+.+++.++++|+.+|+.|.++||++|+.|+++++++++.++
T Consensus       402 ~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~  458 (459)
T COG0165         402 DLADLSLEELQSISPLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA  458 (459)
T ss_pred             CHHhccHHHHhhhccccchHHHHHhchHHHHHHhhccCCCCHHHHHHHHHHHHHhhc
Confidence            999999999998888899999999999999999999999999999999999998875

>PLN02646 argininosuccinate lyase Back     alignment and domain information
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>KOG1317 consensus Fumarase [Energy production and conversion] Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B Back     alignment and domain information
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) [] Back     alignment and domain information
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli) Back     alignment and domain information
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
2e9f_A462 Crystal Structure Of T.th.hb8 Argininosuccinate Lya 1e-128
1k7w_A468 Crystal Structure Of S283a Duck Delta 2 Crystallin 1e-109
1auw_A468 H91n Delta 2 Crystallin From Duck Length = 468 1e-108
1hy1_A468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 1e-108
1tju_A474 Crystal Structure Of T161s Duck Delta 2 Crystallin 1e-108
1tjv_A474 Crystal Structure Of T161d Duck Delta 2 Crystallin 1e-107
1tj7_A457 Structure Determination And Refinement At 2.44 A Re 1e-107
1u15_A472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 1e-106
1aos_A464 Human Argininosuccinate Lyase Length = 464 1e-103
1dcn_A447 Inactive Mutant H162n Of Delta 2 Crystallin With Bo 1e-102
1hy0_A466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 1e-102
1k62_A464 Crystal Structure Of The Human Argininosuccinate Ly 1e-102
1xwo_A465 Crystal Structrue Of Goose Delta Crystallin Length 1e-102
1i0a_A466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 1e-95
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 2e-16
1j3u_A468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 1e-15
3r6y_A401 Crystal Structure Of Chymotrypsin-Treated Aspartase 4e-15
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 1e-11
4adl_A495 Crystal Structures Of Rv1098c In Complex With Malat 2e-10
3no9_A475 Crystal Structure Of Apo Fumarate Hydratase From My 3e-10
3qbp_A478 Crystal Structure Of Fumarase Fum From Mycobacteriu 4e-10
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 4e-10
3rrp_A471 Crystal Structure Of Fumarate Hydratase Fum From My 5e-10
4apa_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 7e-10
4apb_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 1e-09
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 4e-09
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 2e-08
3rd8_A489 Crystal Structure Of Fumarate Hydratase Class Ii My 3e-08
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 3e-07
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 3e-07
1yfm_A488 Recombinant Yeast Fumarase Length = 488 3e-07
3tv2_A459 Structure Of A Class Ii Fumarate Hydratase From Bur 4e-07
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 6e-07
3e04_A490 Crystal Structure Of Human Fumarate Hydratase Lengt 8e-07
1jsw_A478 Native L-Aspartate Ammonia Lyase Length = 478 1e-06
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 2e-06
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 2e-06
4eei_A438 Crystal Structure Of Adenylosuccinate Lyase From Fr 5e-06
1fup_A472 Fumarase With Bound Pyromellitic Acid Length = 472 1e-05
1fuo_A467 Fumarase C With Bound Citrate Length = 467 1e-05
1kq7_A467 E315q Mutant Form Of Fumarase C From E.Coli Length 1e-05
2fus_A467 Mutations Of Fumarase That Distinguish Between The 1e-05
3oce_A474 Crystal Structure Of Fumarate Lyase:delta Crystalli 5e-05
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 8e-05
1fur_A467 Fumarase Mutant H188n With Bound Substrate L-Malate 1e-04
2fel_A359 3-carboxy-cis,cis-muconate Lactonizing Enzyme From 5e-04
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase Complexed With L-arginine Length = 462 Back     alignment and structure 
Iteration: 1

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/459 (50%), Positives = 311/459 (67%), Gaps = 2/459 (0%)
Query: 60  KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119
           + WGGRF E       +F  S+++D+AL++ D+  ++ HA ML   GL+S  +  +IL+G
Sbjct: 4   RTWGGRFGEGPDALAARFNASLAFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKG 63
Query: 120 LDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCR 179
           LD IE +IEAG F WR + EDVHMN+EA LT+++G P  KLHTARSRNDQV TD RL+ R
Sbjct: 64  LDRIEEEIEAGTFPWREELEDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLYLR 123
Query: 180 DAIDTIVRSIQRLQVALVKLALK--NEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDA 237
            AID ++  +  L+  LV+ A K  +   ++PGYTHLQRAQPVLL H  LAY E L+RDA
Sbjct: 124 GAIDELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDA 183
Query: 238 GRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297
           GRL+D + R+N  PLGA ALAGTG PIDR  TA  L F APMRNS+DAV+ RDF LE LS
Sbjct: 184 GRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLS 243
Query: 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVI 357
           A +I  +HLSR+ EE +L+++EEFGF+   D+ +TGSSIMPQKKNPD +EL+R K+ RV+
Sbjct: 244 ALNIGMLHLSRMAEELILYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVL 303
Query: 358 GDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKAL 417
           G  V L  + KGLPLAYN+DLQEDKEP  D++ T    L + A     + +  ER+ +A 
Sbjct: 304 GAFVGLSAVVKGLPLAYNKDLQEDKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAA 363
Query: 418 PAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKD 477
             GY  AT LADYL  K +PFR +H +VG+ V   V +   L+DL+L+E+++ +P+F +D
Sbjct: 364 EGGYTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLFAED 423
Query: 478 VYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN 516
               L +E AI +  S+G T    V E+L     ++G++
Sbjct: 424 ALPLLRLETAIHRRRSYGGTAPEAVRERLEEAKKEVGLD 462
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 Back     alignment and structure
>pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 Back     alignment and structure
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 Back     alignment and structure
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From Bacillus Sp. Ym55-1 Length = 401 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate Length = 495 Back     alignment and structure
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (Rv1098c) S318a In Apo Form Length = 474 Back     alignment and structure
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase ( Rv1098c) S318c In Complex With Fumarate Length = 474 Back     alignment and structure
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii Mycobacterium Smegmatis Length = 489 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|3TV2|A Chain A, Structure Of A Class Ii Fumarate Hydratase From Burkholderia Pseudomallei Length = 459 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 Back     alignment and structure
>pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Francisella Tularensis Complexed With Amp And Succinate Length = 438 Back     alignment and structure
>pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 Back     alignment and structure
>pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 Back     alignment and structure
>pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 Back     alignment and structure
>pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 Back     alignment and structure
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure
>pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 Back     alignment and structure
>pdb|2FEL|A Chain A, 3-carboxy-cis,cis-muconate Lactonizing Enzyme From Agrobacterium Radiobacter S2 Length = 359 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 0.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 0.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 0.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 3e-22
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 2e-21
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 1e-20
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 3e-20
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 1e-19
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 1e-18
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 3e-16
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 8e-16
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 2e-11
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 4e-11
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 4e-11
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 8e-11
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 2e-10
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 2e-10
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 3e-09
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 1e-08
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 3e-08
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 3e-08
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 4e-08
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 5e-08
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 5e-08
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
 Score =  773 bits (1998), Expect = 0.0
 Identities = 199/456 (43%), Positives = 283/456 (62%), Gaps = 1/456 (0%)

Query: 60  KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119
            LWGGRF ++     ++F +S+ +D  L + DI+GS A +  L   G+++  ++  +   
Sbjct: 2   ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEA 61

Query: 120 LDEIERQIEAGKF-MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWC 178
           L+ +   + A    +  +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC
Sbjct: 62  LNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWC 121

Query: 179 RDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238
           +D +  ++ + ++LQ ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  
Sbjct: 122 KDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDES 181

Query: 239 RLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298
           RLQD   R++  PLG  ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA
Sbjct: 182 RLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA 241

Query: 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIG 358
            +I  +HLSR  E+ + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G
Sbjct: 242 AAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQG 301

Query: 359 DLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP 418
            L  ++   KGLPLAYN+D+QEDKE  FD++ T +  L ++A     I     R ++A  
Sbjct: 302 ALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ 361

Query: 419 AGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDV 478
            GY +AT LADYLV K VPFR +H IVG+AV   + +   L+DL L E++  + V D+DV
Sbjct: 362 QGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDV 421

Query: 479 YEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 514
           Y  L +++ + K ++ G      V + +    A+LG
Sbjct: 422 YPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG 457
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 100.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
Probab=100.00  E-value=2.6e-105  Score=855.18  Aligned_cols=455  Identities=44%  Similarity=0.705  Sum_probs=441.1

Q ss_pred             ccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccc-cCC
Q 010020           60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-TDR  138 (520)
Q Consensus        60 ~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~-~~~  138 (520)
                      ++||+||++++++.+.+|+.+..+|+.++++++.+++|||++|.++|+||++++++|.++|++|..+...++|+++ +.+
T Consensus         2 ~~~~gr~~~~~~~~~~~f~~s~~~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~   81 (457)
T 1tj7_A            2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDA   81 (457)
T ss_dssp             -CCCTTCSSCCCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGSCC
T ss_pred             cccccccccchHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCCCCC
Confidence            5899999999999999999999999999999999999999999999999999999999999999888888889887 679


Q ss_pred             CchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcc
Q 010020          139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ  218 (520)
Q Consensus       139 ~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~  218 (520)
                      ||+|||+|+++.+.+|+.|+|||+|+||||+++|+++|++|+++..|.+.|..|+++|.++|++|++++||||||+||||
T Consensus        82 ~dv~~~v~~~l~e~~g~~g~~vH~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~  161 (457)
T 1tj7_A           82 EDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQ  161 (457)
T ss_dssp             SSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEE
T ss_pred             CcHHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCe
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHH
Q 010020          219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA  298 (520)
Q Consensus       219 P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~  298 (520)
                      ||||||||++|+++|.||++||.+++++++.+||||+|++||++++||+++++.|||+.+..|+++|+++||+++|++++
T Consensus       162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~  241 (457)
T 1tj7_A          162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA  241 (457)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHH
T ss_pred             echHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHH
Confidence            99999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccc
Q 010020          299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL  378 (520)
Q Consensus       299 la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~  378 (520)
                      ++.++++|+|||+||++|+|+|||||++|+.+.+|||||||||||+.+|.++++|++++|+..+++.+++++|++||||+
T Consensus       242 l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl  321 (457)
T 1tj7_A          242 AAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDM  321 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcch
Confidence            99999999999999999999999999999888899999999999999999999999999999999999999999999999


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCC
Q 010020          379 QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQ  458 (520)
Q Consensus       379 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~  458 (520)
                      |++|..+++++.++..++..+..+++||+||+++|++++.++++++|+++++|+++|+|||+||++|+++++.|.++|++
T Consensus       322 ~~~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~  401 (457)
T 1tj7_A          322 QEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKP  401 (457)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hhHHhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhh
Q 010020          459 LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG  514 (520)
Q Consensus       459 l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~  514 (520)
                      +.|+.+++...+.+.+++++.+++||+.+++.|.++||++|+.|+++++.+++.++
T Consensus       402 l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~~l~  457 (457)
T 1tj7_A          402 LEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG  457 (457)
T ss_dssp             GGGSCHHHHTTTCTTCCTTHHHHTSHHHHHHTCCSTTCCSHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhhcHHHHHHhCCHHHHHhccCCCCCCCHHHHHHHHHHHHHhcC
Confidence            99999888676777778889999999999999999999999999999999988763
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 520
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 1e-130
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 1e-123
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 1e-114
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 2e-63
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 6e-62
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 9e-55
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 7e-53
d1re5a_448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 2e-50
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 1e-47
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 2e-47
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 1e-44
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 2e-42
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

 Score =  384 bits (987), Expect = e-130
 Identities = 199/455 (43%), Positives = 283/455 (62%), Gaps = 1/455 (0%)

Query: 61  LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120
           LWGGRF ++     ++F +S+ +D  L + DI+GS A +  L   G+++  ++  +   L
Sbjct: 1   LWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEAL 60

Query: 121 DEIERQIEAGKF-MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCR 179
           + +   + A    +  +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC+
Sbjct: 61  NVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCK 120

Query: 180 DAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGR 239
           D +  ++ + ++LQ ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  R
Sbjct: 121 DTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESR 180

Query: 240 LQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN 299
           LQD   R++  PLG  ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA 
Sbjct: 181 LQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAA 240

Query: 300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGD 359
           +I  +HLSR  E+ + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G 
Sbjct: 241 AIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGA 300

Query: 360 LVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA 419
           L  ++   KGLPLAYN+D+QEDKE  FD++ T +  L ++A     I     R ++A   
Sbjct: 301 LTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQ 360

Query: 420 GYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVY 479
           GY +AT LADYLV K VPFR +H IVG+AV   + +   L+DL L E++  + V D+DVY
Sbjct: 361 GYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVY 420

Query: 480 EYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 514
             L +++ + K ++ G      V + +    A+LG
Sbjct: 421 PILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG 455
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-104  Score=849.70  Aligned_cols=457  Identities=42%  Similarity=0.676  Sum_probs=446.4

Q ss_pred             ccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCC
Q 010020           60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDRE  139 (520)
Q Consensus        60 ~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~  139 (520)
                      |+|||||++++++.++.|+.+..+|++|++|+|++++||+.||.++|+||++++++|.++|++|..+...+.|++++..|
T Consensus         2 klW~gr~~~~~~~~~~~f~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~I~~al~~i~~~~~~~~~~~~~~~e   81 (459)
T d1k62b_           2 KLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLTKAEMDQILHGLDKVAEEWAQGTFKLNSNDE   81 (459)
T ss_dssp             CSSCSCCCCSSCHHHHHTTCCHHHHGGGHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCTTCC
T ss_pred             CCCCccCCcchhHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCccc
Confidence            69999999999999999999999999999999999999999999999999999999999999999988889999999999


Q ss_pred             chhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccc
Q 010020          140 DVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP  219 (520)
Q Consensus       140 dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P  219 (520)
                      |+|+++|..+.+.+|+.|+|||+|+||||++||+++|++|+++..+.+.|..|+++|.++|++|++|+||||||+|||||
T Consensus        82 d~~~~ie~~l~~~~g~~~~~vH~G~S~nD~~~Ta~~L~~r~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P  161 (459)
T d1k62b_          82 DIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQP  161 (459)
T ss_dssp             SHHHHHHHHHHHTTSSGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEE
T ss_pred             chHHHHHHHHHHhhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccceecceeecccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHH
Q 010020          220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN  299 (520)
Q Consensus       220 ~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~l  299 (520)
                      ||||||+++|+++|.|+++||.+++++++.+||||||++|+++++||+++++.|||..+..|+++|+++||+++|+++++
T Consensus       162 ~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lGg~a~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~sRd~~~e~~~~l  241 (459)
T d1k62b_         162 IRWSHWILSHAVALTRDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSERDFVAEFLFWR  241 (459)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCTTCTTTTCCTTCCCHHHHHHHTTCSCBCSCHHHHHHCCHHHHHHHHHH
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCcccchhhhhhHHhhccccccchhhhhcchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccc
Q 010020          300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ  379 (520)
Q Consensus       300 a~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~  379 (520)
                      ++++++|+|||+||++|+++|||++++|+++++|||||||||||+.+|.++++|+.+.|+.++++.+++++|++||||++
T Consensus       242 ~~l~~~l~ria~Dl~l~~~~e~~~~~~~~~~~~GSSiMPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~  321 (459)
T d1k62b_         242 SLCMTHLSRMAEDLILYCTKEFSFVQLSDAYSTGSSLMPRKKNPDSLELIRSKAGRVFGRCAGLLMTLKGLPSTYNKDLQ  321 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTTCSEECCGGGCEECSSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGG
T ss_pred             hHHHHHHHHHHHHHHHhccccccceeecccccccccccccccccHHHHHHHHHhhhhhhhhhhHHHHHhcChhhhcccch
Confidence            99999999999999999999999999998899999999999999999999999999999999999999999999999999


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCCh
Q 010020          380 EDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQL  459 (520)
Q Consensus       380 ~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l  459 (520)
                      .+|..+++++..+..++..+..+|++|+||++||++++.++ +++|+++++|+++|+|||+||++|+++|+.|.++|+++
T Consensus       322 ~~~~~l~~~~~~~~~~l~~~~~vi~~l~vn~erm~~~l~~~-~~At~la~~Lv~~Gi~fr~AH~~V~~lv~~a~~~g~~l  400 (459)
T d1k62b_         322 EDKEAVFEVSDTMSAVLQVATGVISTLQIHQENMGQALSPD-MLATDLAYYLVRKGMPFRQAHEASGKAVFMAETKGVAL  400 (459)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHTCCGG-GTHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTSCG
T ss_pred             hcchhhhhhhHHHHhhhhhhhhccceeEechhhHHHHHhhc-chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCH
Confidence            99999999999999999999999999999999999999765 57999999999999999999999999999999999999


Q ss_pred             hHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhhhc
Q 010020          460 QDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR  517 (520)
Q Consensus       460 ~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~~~  517 (520)
                      .|+.+++.+.+.+.+++++.+++||+++|+.|.++||++|++|+++|+.+++.|++++
T Consensus       401 ~~l~~~e~~~~~~~~~~dl~~~ldp~~~v~~r~~~GG~ap~~V~~~i~~~r~~L~~~~  458 (459)
T d1k62b_         401 NQLSLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQAQQ  458 (459)
T ss_dssp             GGSCHHHHHTTCTTCCGGGGGTTCHHHHHTTCCSTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCHHHHHHhccccHHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            9999998888888888999999999999999999999999999999999999998875
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure