Citrus Sinensis ID: 010204


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-----
MDFSFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEYDEETQSLTRGKPEGDLSLVKQEKKEKDAGVTANISDEDDVEEDKRE
cccccccHHHHHHHHHHHHHHHHHHHccccEEccccccccEEccccccccccccccccccccccccccEEEEEEEcccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccEEEccccccccccEEEEEEEcccccccccccEEEEEcccccEEEEEEEEccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccEEEcccccccEEEEEEEEEEEcHHHHHHcccccccccEEEEEEEEEccHHHcccccccccEEEEEcHHHHHccccccccEEEccccccccccEEEEEEEEcccccccccccEEEEccccEEEEEEEEEcccccccEEEEEEEEEcccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccccccHHcccc
MDFSFLHKTTSILILALISFLFLLFqssnasihtydnnpfrdvgnsallpggseglaasldgsrsfirfenvtfwrtkaaadehsemehsTGLVQVVIFEAadrnniggsayggqrsicctpdlaklegckqgevirmpsatdinwpivLNVQFSgnylstkmdnvdvpitktgmYNLFFIacdpklkglvmsgktiwknpngylpgrmaplMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYanfnntgirpvVITTWVVTVGAVRKSLTRLLILCVSmgygvvrptlggltSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFkatdpfnerwQSAWIITAFWDVLAFALLCVICYlwapsqnsqryayseevgeeydeetqsltrgkpegdlsLVKQEkkekdagvtanisdeddveedkre
MDFSFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMpsatdinwpIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEYDeetqsltrgkpegdlslvkqekkekdagvtanisdeddveedkre
MDFSFLHKTTsililalisflfllfqssNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSeevgeeydeeTQSLTRGKPEGDLSLVKQEKKEKDAGVTANISDEDDVEEDKRE
***SFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALL******LAASLDGSRSFIRFENVTFWRTKAAA*******HSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAP***************************************************************
********TTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGS*************IRFENVTFWR****************LVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSAT*INWPIVL***************VDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAY******************************************************
MDFSFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKA**********STGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNS**********************GKPEGDLSLVKQE************************
*DFSFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEH**MEHSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEE***************************************************
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFSFLHKTTSILILALISFLFLLFQSSNASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEYDEETQSLTRGKPEGDLSLVKQEKKEKDAGVTANISDEDDVEEDKRE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query515 2.2.26 [Sep-21-2011]
Q28EW0541 Transmembrane protein 87A yes no 0.586 0.558 0.340 5e-48
Q8BKU8555 Transmembrane protein 87B yes no 0.530 0.491 0.340 3e-46
Q96K49555 Transmembrane protein 87B yes no 0.578 0.536 0.314 2e-45
Q8BXN9555 Transmembrane protein 87A no no 0.598 0.554 0.345 6e-44
Q8NBN3555 Transmembrane protein 87A no no 0.598 0.554 0.345 1e-42
O13989505 Uncharacterized protein C yes no 0.704 0.718 0.241 2e-21
P32857523 Membrane protein PTM1 OS= yes no 0.638 0.629 0.234 3e-17
A6ZZS6523 Membrane protein PTM1 OS= N/A no 0.638 0.629 0.234 3e-17
P38745532 Uncharacterized membrane no no 0.724 0.701 0.232 3e-08
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1 Back     alignment and function desciption
 Score =  192 bits (488), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 183/314 (58%), Gaps = 12/314 (3%)

Query: 199 KNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFE 258
           K P+G++     PLM FY+ M + Y++L+++WFI    YWKD+L++Q  I AVI LG+ E
Sbjct: 197 KGPHGFISASDWPLMIFYMVMCIMYILLALLWFIWSACYWKDLLRIQFWIAAVIFLGMLE 256

Query: 259 MILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSK 318
             ++++EY N +NTG+    +  +   + +++++L RLL+  VS+GYG+++P LG +  +
Sbjct: 257 KAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTLARLLVTIVSLGYGIIKPRLGAVMHR 316

Query: 319 VLLLGATYFLASELLDITEFVGTISDISGRARLFLV--LPVAFLDAFLILWIFTSLSKTL 376
           V+ +G  YF+ + +  +   +G     +    L L+  +P+A LD+ L  WIF SL++T+
Sbjct: 317 VVGMGVLYFVFAAVEGVMRIIG-----AKEYDLVLLAGIPLALLDSGLCWWIFVSLAQTM 371

Query: 377 EQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEV-YFKATDPFNERWQSAWIITAFW 435
           + L+ +++++K  +YR F+N L   ++AS+I++ +    F+  D     W   W+  A+W
Sbjct: 372 KTLKLRKNTVKYSLYRHFTNTLIFAILASIIFMIWRTKKFQLVD-CQADWMELWVDDAYW 430

Query: 436 DVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEYDEETQSL-TRGKPEG-DLSLVKQEKK 493
             L F +L VI +LW PS N+QRYA++  + +  DE  + L T    EG  L   K E  
Sbjct: 431 RFLFFIILLVIMFLWRPSANNQRYAFTPLIDDSDDEVEEFLVTDHLAEGMKLRGTKPECN 490

Query: 494 EKDAGVTANISDED 507
                   NI DED
Sbjct: 491 GAPKPPATNI-DED 503





Xenopus tropicalis (taxid: 8364)
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1 Back     alignment and function description
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1 Back     alignment and function description
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1 Back     alignment and function description
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3 Back     alignment and function description
>sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2 Back     alignment and function description
>sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTM1 PE=1 SV=2 Back     alignment and function description
>sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PTM1 PE=3 SV=1 Back     alignment and function description
>sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query515
255575428518 ptm1, putative [Ricinus communis] gi|223 0.996 0.990 0.782 0.0
225448083512 PREDICTED: transmembrane protein 87B [Vi 0.904 0.910 0.822 0.0
449510471530 PREDICTED: transmembrane protein 87A-lik 0.914 0.888 0.781 0.0
449449723530 PREDICTED: transmembrane protein 87A-lik 0.914 0.888 0.781 0.0
356558534516 PREDICTED: transmembrane protein 87A-lik 0.957 0.955 0.723 0.0
356525934519 PREDICTED: transmembrane protein 87A-lik 0.941 0.934 0.734 0.0
357156530517 PREDICTED: transmembrane protein 87B-lik 0.966 0.963 0.711 0.0
125577452514 hypothetical protein OsJ_34195 [Oryza sa 0.937 0.939 0.720 0.0
115485839514 Os11g0546100 [Oryza sativa Japonica Grou 0.937 0.939 0.720 0.0
414591524510 TPA: putative lung seven transmembrane r 0.945 0.954 0.720 0.0
>gi|255575428|ref|XP_002528616.1| ptm1, putative [Ricinus communis] gi|223531961|gb|EEF33774.1| ptm1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/520 (78%), Positives = 460/520 (88%), Gaps = 7/520 (1%)

Query: 1   MDFSFLHKTTSILILALISFLFLL---FQSSNASIHTYDNNPFRDVGNSALLPGGSEGLA 57
           MDF+   ++ +++ +  +  L +     +  NASIH Y+N  F DVGN+ LL GGSEG+ 
Sbjct: 1   MDFASRGRSYNVINILFVIVLIVTGSAIEVCNASIHIYNNEVFSDVGNAYLLSGGSEGIV 60

Query: 58  ASL-DGSRSFIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFEAADRNNIGGSAYGGQR 116
           ASL +  RS+IRF+++TFWRTKAAA+EHSEMEHSTGL+QVVIFEAADRNNIGGSAYGGQR
Sbjct: 61  ASLLNTGRSYIRFKDITFWRTKAAAEEHSEMEHSTGLIQVVIFEAADRNNIGGSAYGGQR 120

Query: 117 SICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMY 176
           SICCTPDLAKLEGCKQGEVIR+PSATD+ WPIV+NVQFSGNYLST++ N  V ITKTGMY
Sbjct: 121 SICCTPDLAKLEGCKQGEVIRIPSATDVKWPIVMNVQFSGNYLSTEIRNEVVNITKTGMY 180

Query: 177 NLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVR 236
           NLFFI CDPKLKGL+MSGKT+WKNP+GYLPGRMAPLM FYV+MSLAY++L VIWF QY+R
Sbjct: 181 NLFFITCDPKLKGLIMSGKTVWKNPDGYLPGRMAPLMKFYVFMSLAYLLLIVIWFTQYMR 240

Query: 237 YWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRL 296
           +WKDILQLQHCITAV+ LGLFEMILW+SEYANFN+ GIRPV ITTWVVTVGA+RK+L RL
Sbjct: 241 FWKDILQLQHCITAVVALGLFEMILWYSEYANFNSMGIRPVAITTWVVTVGAIRKTLARL 300

Query: 297 LILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLP 356
           LIL VSMGYGVVRPTLGGLTSKV+LLG TYFLASELLDITE+VG I+D+SGRARLFLVLP
Sbjct: 301 LILSVSMGYGVVRPTLGGLTSKVILLGFTYFLASELLDITEYVGNINDVSGRARLFLVLP 360

Query: 357 VAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFK 416
            AFLDAFLILWIFTSLS+TLEQLQAKRS++KLDIYRKFSNALAV VIASV WIAYEVYFK
Sbjct: 361 DAFLDAFLILWIFTSLSRTLEQLQAKRSAVKLDIYRKFSNALAVAVIASVAWIAYEVYFK 420

Query: 417 ATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEY-DEETQS 475
           ATDPFNERWQ AWIITAFWD+LAFALLCVICYLWAPSQ+SQRYAYSEE+GEE  DEE QS
Sbjct: 421 ATDPFNERWQGAWIITAFWDILAFALLCVICYLWAPSQSSQRYAYSEELGEESDDEEAQS 480

Query: 476 LTRGKPEGDLSLVKQEKKEKDAGVTANISDEDDVEEDKRE 515
           LTRGK +GD+SLV  EKKEK+AG T     E++ EEDKRE
Sbjct: 481 LTRGKSDGDISLV--EKKEKNAGSTDVFDQENETEEDKRE 518




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448083|ref|XP_002276310.1| PREDICTED: transmembrane protein 87B [Vitis vinifera] gi|298204596|emb|CBI23871.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449510471|ref|XP_004163675.1| PREDICTED: transmembrane protein 87A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449449723|ref|XP_004142614.1| PREDICTED: transmembrane protein 87A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356558534|ref|XP_003547560.1| PREDICTED: transmembrane protein 87A-like [Glycine max] Back     alignment and taxonomy information
>gi|356525934|ref|XP_003531576.1| PREDICTED: transmembrane protein 87A-like [Glycine max] Back     alignment and taxonomy information
>gi|357156530|ref|XP_003577488.1| PREDICTED: transmembrane protein 87B-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|125577452|gb|EAZ18674.1| hypothetical protein OsJ_34195 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|115485839|ref|NP_001068063.1| Os11g0546100 [Oryza sativa Japonica Group] gi|77551424|gb|ABA94221.1| Lung seven transmembrane receptor family protein, expressed [Oryza sativa Japonica Group] gi|113645285|dbj|BAF28426.1| Os11g0546100 [Oryza sativa Japonica Group] gi|125534699|gb|EAY81247.1| hypothetical protein OsI_36425 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|414591524|tpg|DAA42095.1| TPA: putative lung seven transmembrane receptor family protein [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query515
TAIR|locus:2045766496 AT2G01070 "AT2G01070" [Arabido 0.912 0.947 0.701 2.2e-183
TAIR|locus:2194017509 AT1G72480 "AT1G72480" [Arabido 0.932 0.943 0.533 8.3e-138
TAIR|locus:2195758513 AT1G61670 "AT1G61670" [Arabido 0.922 0.925 0.487 2.1e-125
TAIR|locus:2197449516 AT1G10980 "AT1G10980" [Arabido 0.829 0.827 0.392 1.1e-85
WB|WBGene00016867558 C52B9.4 [Caenorhabditis elegan 0.512 0.473 0.384 2.9e-48
UNIPROTKB|F1NI39554 TMEM87A "Uncharacterized prote 0.617 0.574 0.347 1.1e-46
MGI|MGI:1919727555 Tmem87b "transmembrane protein 0.607 0.563 0.306 3e-46
UNIPROTKB|F6X9D0556 TMEM87B "Uncharacterized prote 0.500 0.464 0.340 2.1e-45
MGI|MGI:2441844555 Tmem87a "transmembrane protein 0.592 0.549 0.337 1.2e-44
UNIPROTKB|E2QV48487 TMEM87B "Uncharacterized prote 0.499 0.527 0.342 1.5e-44
TAIR|locus:2045766 AT2G01070 "AT2G01070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1779 (631.3 bits), Expect = 2.2e-183, P = 2.2e-183
 Identities = 341/486 (70%), Positives = 396/486 (81%)

Query:    30 ASIHTYDNNPFRDVGNSALLPGGSEGLAASLDGSRSFIRFENVTFWRTKAAADEHSEMEH 89
             AS H Y + PF DVGNS LL GGSEG+ AS   SRS IRFEN+T WRT      H     
Sbjct:    27 ASAHIYSSQPFHDVGNSLLLYGGSEGIFAS---SRSLIRFENITLWRT-ITGKGH----R 78

Query:    90 STGLVQVVIFEAADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIV 149
             S GLVQ VIFEA+DRNNIGGSAYGGQRSICCTPDLAKL+GCKQGE+IR+PS  D  WPI+
Sbjct:    79 SNGLVQAVIFEASDRNNIGGSAYGGQRSICCTPDLAKLQGCKQGEIIRIPSPHDPQWPIL 138

Query:   150 LNVQFSGNYLSTKMDNVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRM 209
             L V+F G   S KM + ++ ITKTG+YNL FI+CDP+LKGL M+GKT+WKNP+GYLPGRM
Sbjct:   139 LPVRFKGKRSSAKMADTEILITKTGIYNLLFISCDPQLKGLKMTGKTVWKNPDGYLPGRM 198

Query:   210 APLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANF 269
             APL+NFYVYMSLAY++LS +WF QY+R+  DIL LQHCITAVI LGL EM+ W+ +YANF
Sbjct:   199 APLVNFYVYMSLAYLLLSAVWFFQYLRFRMDILPLQHCITAVILLGLLEMLFWYLDYANF 258

Query:   270 NNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLA 329
             N+TG+RP+ +TTWVVT+GA+RK+++R+LILCVSMG+GVV+ TLGGLTSKVLL+G TYF+A
Sbjct:   259 NHTGMRPLALTTWVVTIGALRKTVSRILILCVSMGFGVVKSTLGGLTSKVLLVGVTYFIA 318

Query:   330 SELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLD 389
             SE+LDI E VG I D+SGR++LFLVLP AFLDAFLILWIFTSLSKTLEQLQ KR+S+KL+
Sbjct:   319 SEILDIAEHVGIIDDMSGRSKLFLVLPDAFLDAFLILWIFTSLSKTLEQLQMKRTSVKLE 378

Query:   390 IYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYL 449
             IYRKFSNALAV V+ASV WI YEVYFKATDPFNERWQ+AW ITAFWDV+AF LLC+ICYL
Sbjct:   379 IYRKFSNALAVMVVASVAWIVYEVYFKATDPFNERWQTAWTITAFWDVIAFLLLCIICYL 438

Query:   450 WAPSQNSQRYAYSXXXXXXXXXXTQSLTRGKPEGDLSLVKQEKKEKDAGVTANISDEDDV 509
             W PSQNSQRYAYS           QSLT GK +GD+SLVKQEK        A    E+DV
Sbjct:   439 WTPSQNSQRYAYSGDVDEENEEA-QSLTGGKQDGDISLVKQEKN-------AESDREEDV 490

Query:   510 EEDKRE 515
             EEDKRE
Sbjct:   491 EEDKRE 496




GO:0003674 "molecular_function" evidence=ND
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016021 "integral to membrane" evidence=IEA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
TAIR|locus:2194017 AT1G72480 "AT1G72480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195758 AT1G61670 "AT1G61670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197449 AT1G10980 "AT1G10980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00016867 C52B9.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NI39 TMEM87A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1919727 Tmem87b "transmembrane protein 87B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6X9D0 TMEM87B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2441844 Tmem87a "transmembrane protein 87A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QV48 TMEM87B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query515
pfam06814287 pfam06814, Lung_7-TM_R, Lung seven transmembrane r 1e-124
>gnl|CDD|219188 pfam06814, Lung_7-TM_R, Lung seven transmembrane receptor Back     alignment and domain information
 Score =  363 bits (934), Expect = e-124
 Identities = 138/289 (47%), Positives = 185/289 (64%), Gaps = 3/289 (1%)

Query: 170 ITKTGMYNLFFIACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVI 229
           I KTG+Y L+F           + GK  WKNP GYL    APLM FY  MSLAYV+L  +
Sbjct: 1   IKKTGLYCLYFH--SGSKSSTALKGKVNWKNPYGYLSASEAPLMPFYGIMSLAYVLLGAL 58

Query: 230 WFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFNNTGIRPVVITTWVVTVGAV 289
           WF    +YW DIL LQ  I AVI LG+ E+   + +YA  N+ G  P  +  +   + A+
Sbjct: 59  WFFILFKYWHDILPLQKYIAAVIALGMVELAFHYIDYAFINSKGSSPEGLAVFASILSAL 118

Query: 290 RKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRA 349
           +K+L+R+L+L VS+GYG+V+PTLG    KV  +G  YF+A+ +L I    G  SD S + 
Sbjct: 119 KKTLSRILLLIVSLGYGIVKPTLGDTLKKVAGIGLLYFVAACVLFIVRESGIESDSSYKL 178

Query: 350 RLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWI 409
            LF +LP+A LD F I WIF SLSKTL  L+ +R+ +KL +YR F+N LA +V+AS I I
Sbjct: 179 VLFFLLPLALLDLFFIYWIFRSLSKTLRDLKLRRNLVKLSLYRHFTNMLACSVVASFIII 238

Query: 410 AYE-VYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQ 457
             E +YFK TD  N+ W++AW+ITAFW++L+  LL  ICYLW PSQN+ 
Sbjct: 239 LVEKIYFKTTDSCNKYWKTAWLITAFWELLSLVLLVTICYLWRPSQNNP 287


This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins. Length = 287

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 515
KOG2568518 consensus Predicted membrane protein [Function unk 100.0
PF06814295 Lung_7-TM_R: Lung seven transmembrane receptor; In 100.0
KOG2569440 consensus G protein-coupled seven transmembrane re 100.0
PF10192257 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane dom 99.61
KOG4290429 consensus Predicted membrane protein [Function unk 98.3
PF06664298 MIG-14_Wnt-bd: Wnt-binding factor required for Wnt 89.05
>KOG2568 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=2.7e-113  Score=906.47  Aligned_cols=483  Identities=45%  Similarity=0.776  Sum_probs=438.2

Q ss_pred             ccceeeeecCCCccccCCeeeecCCCccccccC-----CCCCc--ceeeecceeecccccccccCccccccceEEEEEEe
Q 010204           28 SNASIHTYDNNPFRDVGNSALLPGGSEGLAASL-----DGSRS--FIRFENVTFWRTKAAADEHSEMEHSTGLVQVVIFE  100 (515)
Q Consensus        28 ~~~si~~y~~~~f~~~~~~~~~~~~~~Gmys~~-----~~~~~--~I~f~~v~f~~~~~~~~~~~~~~~~~g~v~~vIfe  100 (515)
                      +.+++|+|.+++|....|++.++|+++|||++.     ++.||  +|||+++++.|++++++++|    +.|.|+++|||
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ys~~~~d~~~s~~p~~~~~f~~~t~~~~~~~~~~~n----~~~~v~~~ife   90 (518)
T KOG2568|consen   15 AWLSFLSYVYSEFASELNAQHFHGVSEGIYSSFVSDLFGSLDPESFIRFDSITLVRTSESADEQN----SNGLVEALIFE   90 (518)
T ss_pred             hhHhheechhhhhhhhhcceeeeccccccccccHHHhcCCCCccccccceeEEEEEccCcccccc----cccceeeeeee
Confidence            489999999999999999999999999999993     55555  99999999999887555443    35789999999


Q ss_pred             eccccccccccCCCceeeeeChhhhccCCCCCCCEEecCCCCCCCCceEEEEeeccCcccccCCCeeeeeCCCCcEEEEE
Q 010204          101 AADRNNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPITKTGMYNLFF  180 (515)
Q Consensus       101 ~~D~~~iG~~~~~g~~~~~C~~~~~~~g~C~~g~~Ii~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~y~I~ktG~Y~v~~  180 (515)
                      |||+++||++.++|++.||||+++++.|.|++|++|+.|+++||.||++..+.+++++.+..++|..|+|++||+||+++
T Consensus        91 ~kd~~~iG~~~~~~e~~~~C~~~~~~~g~c~~~~~i~~~~~~dp~~~~~~~~~~t~~~~e~~m~~~~~~I~ktG~Y~v~~  170 (518)
T KOG2568|consen   91 FKDRNKIGGSDDDGEKLYICTPDLADTGSCKEGEVIYLPNPTDPEWPKLNSVILTFNDAEVGMSPPAYPIKKTGYYCVYF  170 (518)
T ss_pred             hhhhhccCCcCCCCceEEecCHhHHhcCCcCCCceEEecCCCCCCcccccceeecccccccCCCCceEEeccCcEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999998877888999999999999999999


Q ss_pred             EeeCCCCCceEEEEEEEEECCCCCCCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 010204          181 IACDPKLKGLVMSGKTIWKNPNGYLPGRMAPLMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMI  260 (515)
Q Consensus       181 ~~C~~~~~~~~~~g~v~f~N~~GyLpA~e~pll~fY~~msi~Y~vl~i~W~~~~~k~r~~ll~Iq~~I~avi~l~~le~~  260 (515)
                      ..|+++.++.+.+|+|+||||||||||+++|++|||++|+++|.+++++|+++|+|||||++|||+||+++|+|+|+|++
T Consensus       171 ~~~~~s~~~~~~~~~v~wkNpyGyL~a~~~Plm~fy~~m~laYvllgllW~~~~~~y~~diL~lQ~~I~~Vi~lgm~E~a  250 (518)
T KOG2568|consen  171 ISCDSSLESYKATGSVNWKNPYGYLPASDAPLMPFYGFMCLAYVLLGLLWFFQCAQYWHDILPLQKYITAVIALGMAETA  250 (518)
T ss_pred             EeecCccccccccceEEEECCCCCcChhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcccCCCcchhhhHHhHHHHHHHHHHHHHHHHHHhcccccccccCCccceEeehhHHHHHHHHHHHHHhhhc
Q 010204          261 LWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVG  340 (515)
Q Consensus       261 ~~~~~Y~~~N~~G~~~~~~~v~~~i~~a~k~tlsf~LlLlVslGYGvVkp~L~~~~~kv~~L~v~yfvas~~~~i~~~~g  340 (515)
                      ++|.+|++.|.+|.+|++.++|+++++|+|+|++|+|+|+||||||||||+||+.+.|+..++++|+++++++++++.+|
T Consensus       251 v~y~~y~~~N~tG~~~~~~~~~a~i~sa~K~Tlsr~LlLIVSlGYGIVkP~Lg~~l~rv~~ig~~~~i~s~i~~l~~~~g  330 (518)
T KOG2568|consen  251 VFYSEYANFNSTGMSPKVYTVFASILSAIKKTLSRLLLLIVSLGYGIVKPTLGGTLLRVCQIGVIYFIASEILGLARVIG  330 (518)
T ss_pred             HHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCcchHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCc
Q 010204          341 TISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDP  420 (515)
Q Consensus       341 ~~~d~s~~~~L~~~lpla~~~~~f~~WI~~sL~~Ti~~L~~~rq~~KL~lYr~f~~~lv~~V~~s~i~i~~~i~~~~~~~  420 (515)
                      +++|.++.+++|.++|+|+++++|++|||.||++|+|+||.|||++||+|||||+++|+++|+.+++|++++.++.+.++
T Consensus       331 ~~se~~~~~~lf~~ip~ai~d~~f~~wIF~SL~~Tlk~Lr~rRn~vKl~lYr~F~n~l~~~Vvas~~~i~~~~~~~~~~~  410 (518)
T KOG2568|consen  331 NISELSSLLILFAALPLAILDAAFIYWIFISLAKTLKKLRLRRNIVKLSLYRKFTNTLAFSVVASFAFILVETIFYSIMS  410 (518)
T ss_pred             CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            99999988899999999999999999999999999999999999999999999999999999999999999987777678


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcccccccccCccccc-ccccccC--CCCCC-cchhhhhhhccc
Q 010204          421 FNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYSEEVGEEYDEE-TQSLTRG--KPEGD-LSLVKQEKKEKD  496 (515)
Q Consensus       421 ~~~~Wk~~W~i~~~w~~L~f~~l~~i~~lWRPt~nn~~~A~s~e~~~d~dee-~~~l~~~--~~~~~-~~~~~~~~~~~~  496 (515)
                      ++++||.+|+++++|++|+|.++++||+|||||+||+|||++++.+||+||| +.++...  ..++. .+..+.+... .
T Consensus       411 ~~~~Wk~~Wv~~a~W~~l~~~iLvvI~~LWrPS~nn~ryA~s~l~~d~~ee~~~~~~~~~~~~~~~~~~~~~k~~~~~-~  489 (518)
T KOG2568|consen  411 CNKDWKERWVDTAFWPLLFFLILVVIMFLWRPSQNNQRYAFSPLSDDDEEEEEEESLDLLESLTEGAKSRADKRKSLG-K  489 (518)
T ss_pred             HHHHHHHhhhhhccHHHHHHHHHHHHHHhcCCCCCCcccccccccCCcchhhhhhhhhhcccccccCccccccccccc-c
Confidence            9999999999999999999999999999999999999999999998887665 3444332  22222 1111111111 0


Q ss_pred             cccccCCCCCCCchhhccC
Q 010204          497 AGVTANISDEDDVEEDKRE  515 (515)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~  515 (515)
                      +-...+.+.+||+||+|||
T Consensus       490 ~~~~~~~~~~dDle~~~~~  508 (518)
T KOG2568|consen  490 ADPNKALNFEDDLEEVEEE  508 (518)
T ss_pred             ccccchhchhhhhhccccc
Confidence            1112333557888999986



>PF06814 Lung_7-TM_R: Lung seven transmembrane receptor; InterPro: IPR009637 This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins Back     alignment and domain information
>KOG2569 consensus G protein-coupled seven transmembrane receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF10192 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane domain; InterPro: IPR019336 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG4290 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06664 MIG-14_Wnt-bd: Wnt-binding factor required for Wnt secretion Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query515
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 61/413 (14%), Positives = 112/413 (27%), Gaps = 147/413 (35%)

Query: 137 RMPSATDINWPIVLNVQFSGNYLSTKMDNV--DVPIT--KTGMYNLFFIACDPKLKGLV- 191
           R PS     +    +  ++ N +  K  NV    P    +  +  L      P  K ++ 
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKLRQALLEL-----RPA-KNVLI 155

Query: 192 --M--SGKTIW-------------KNPNG--YLP-GR-------MAPLMNFYVYMSLAYV 224
             +  SGKT W             K      +L           +  L      +   + 
Sbjct: 156 DGVLGSGKT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 225 VL-----SVIWFIQYVRYWKDIL----QLQHCITAVITLGLFEMIL---WFSEYAN-FNN 271
                  ++   I  ++     L      ++C+          ++L     ++  N FN 
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL----------LVLLNVQNAKAWNAFNL 264

Query: 272 TGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASE 331
              + +++TT    V     + T   I        +    +  L  K L       L  E
Sbjct: 265 -SCK-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD-LPRE 321

Query: 332 LLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIF----------TSLSKTLEQLQA 381
           +L        +S I+             +   L  W            T +  +L  L+ 
Sbjct: 322 VLTTNPRR--LSIIA-----------ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 382 KRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFA 441
                    YRK  + L+V                    F     SA I T         
Sbjct: 369 -------AEYRKMFDRLSV--------------------FPP---SAHIPTI-------- 390

Query: 442 LLCVICYLWAPSQNSQRYAYSEEVGEEYDEETQSLTRGKPEGDLSLVKQEKKE 494
              ++  +W            + +  +       L +       SLV+++ KE
Sbjct: 391 ---LLSLIW-----------FDVIKSDVMVVVNKLHK------YSLVEKQPKE 423


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00