Citrus Sinensis ID: 010539

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP
ccccccccccccccccccccEEEEEccccccccccHHHHHHHHcccccccccccccccEEEEEcccHHcHHHHHHHHHcccccEEEccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHcccEEEEcccEEEEEEcccccEEEEEEccccEEEccEEEEcccHHHHHHHccccccccHHHHHHHccccccEEEEEEcccccccccccEEEEccccccccccccccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEEEEcccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
cccEEEccccccccccccccEEEEEccccccccccccHHHHHccccccccccccccccEEEEEccEHHHHHHHHHHHHcccEEEEEccccEEEccHHHHHHHHHHcccHHHccccccEEEEEcccccccEcEccccccccccccHHHHHEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHcccccHHHHHccccHHHHcHHHHHHHHHcccEEEEcccEEEEEEccccEEEEEEEEcccEEEEEEEEEEcccHHHHHHccHHHHccHHHHHHHcccccEEEEEEEEEcHHHHHHHHHHccccccccEEEHHHHcccHHHccccccEEEEEEcccccHccccHHHHHHHHHHHHHHHccHHccccccccEEEEEEEEEcccHHHHccccccccccccccccccEEEcccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccc
MGQSLKIRVktgtrkgfcpskvvcvdyprpdidntsNFLEAAYLsssfrtsprpskplkVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMifampnkpgefsrfdfpevlpaplNGILAILrnnemltwpEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMrkqgvpdrVTTEVFIAMSKalnfinpdeLSMQCILIALNRFLqekhgskmafldgnpperlcLPIVEHIQSlggevrlnsrvqkielnddgtvknflltngnvidgdayvfatpvdilklqlpeNWKEMAYFKRLEklvgvpviniHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCkeyynpnqSMLELvfapaeewiscsdSEIIDATMKELAKLFpdeisadqSKAKIVKYHVVktprsvyktipncepcrplqrspvegfylagDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGkgrlaeasmcp
mgqslkirvktgtrkgfcpskvvcvDYPRPDIDNTSNFLEAAYLSSsfrtsprpskPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKielnddgtvKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKtprsvyktipncepcrplqRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP
MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP
*********KTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYL*************LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARG***********
***********************CVDYPRPDIDNTSNFL*********************VIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ********************
MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLS*********SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKG*********
*****K*****GTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARG***********
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MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query508 2.2.26 [Sep-21-2011]
Q07356566 15-cis-phytoene desaturas yes no 0.988 0.886 0.811 0.0
P28553570 Phytoene dehydrogenase, c yes no 0.996 0.887 0.810 0.0
P28554583 Phytoene dehydrogenase, c N/A no 0.996 0.867 0.804 0.0
P80093582 15-cis-phytoene desaturas N/A no 0.996 0.869 0.798 0.0
Q40406570 Phytoene dehydrogenase, c N/A no 0.940 0.838 0.814 0.0
Q0DUI8578 Phytoene dehydrogenase, c yes no 0.972 0.854 0.800 0.0
A2XDA1578 Phytoene dehydrogenase, c N/A no 0.972 0.854 0.800 0.0
P49086571 Phytoene dehydrogenase, c N/A no 0.946 0.842 0.803 0.0
P29273472 Phytoene dehydrogenase OS N/A no 0.846 0.911 0.602 1e-157
P26294474 15-cis-phytoene desaturas yes no 0.879 0.943 0.589 1e-157
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=1 SV=1 Back     alignment and function desciption
 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/526 (81%), Positives = 476/526 (90%), Gaps = 24/526 (4%)

Query: 3   QSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVI 62
           Q+LK R +  +  G  P +VVCVD PRP+++NT NFLEAA LS+SFR++PRP+KPLKVVI
Sbjct: 40  QALKTRTRRRSTAG--PLQVVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVI 97

Query: 63  AGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYPNIQ 100
           AGAGLAGLSTAKYLADAGHKPLLLEARDVL                       GAYPN+Q
Sbjct: 98  AGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQ 157

Query: 101 NLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE 160
           NLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDFP+VLPAPLNGI AILRNNEMLTWPE
Sbjct: 158 NLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPE 217

Query: 161 KVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDEL 220
           K+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNFINPDEL
Sbjct: 218 KIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDEL 277

Query: 221 SMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND 280
           SMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELND
Sbjct: 278 SMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELND 337

Query: 281 DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 340
           DGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIW
Sbjct: 338 DGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIW 397

Query: 341 FDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEII 400
           FDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAPAEEWIS +DS+II
Sbjct: 398 FDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDII 457

Query: 401 DATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLA 460
           DATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLA
Sbjct: 458 DATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLA 517

Query: 461 GDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
           GDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G  +L+EA++
Sbjct: 518 GDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene. The zeta-carotene produced has a central C15-C15' double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS, the next enzyme in the lycopene biosynthesis pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 5EC: .EC: 5
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1 Back     alignment and function description
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1 Back     alignment and function description
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=1 SV=1 Back     alignment and function description
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1 Back     alignment and function description
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2 Back     alignment and function description
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2 Back     alignment and function description
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1 Back     alignment and function description
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=pds PE=3 SV=2 Back     alignment and function description
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
350541929553 phytoene desaturase [Citrus x paradisi] 1.0 0.918 0.952 0.0
350541931553 phytoene desaturase [Citrus x paradisi] 1.0 0.918 0.950 0.0
350541935553 phytoene desaturase [Citrus x paradisi] 1.0 0.918 0.949 0.0
350541937553 phytoene desaturase [Citrus sinensis] 1.0 0.918 0.949 0.0
13991882552 phytoene desaturase [Citrus x paradisi] 0.998 0.918 0.950 0.0
190576745553 phytoene desaturase [Citrus maxima] 1.0 0.918 0.947 0.0
25518260553 phytoene desaturase (EC 1.14.99.-) 1 - c 1.0 0.918 0.956 0.0
350541939553 phytoene desaturase [Citrus sinensis] 1.0 0.918 0.952 0.0
350541925553 phytoene desaturase [Citrus sinensis] 1.0 0.918 0.952 0.0
350541927553 phytoene desaturase [Citrus sinensis] 1.0 0.918 0.950 0.0
>gi|350541929|gb|AEQ29520.1| phytoene desaturase [Citrus x paradisi] gi|350541933|gb|AEQ29522.1| phytoene desaturase [Citrus x paradisi] Back     alignment and taxonomy information
 Score = 1030 bits (2663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/530 (95%), Positives = 505/530 (95%), Gaps = 22/530 (4%)

Query: 1   MGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKV 60
           MGQSLKIRVKT TRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKV
Sbjct: 24  MGQSLKIRVKTRTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKV 83

Query: 61  VIAGAGLAGLSTAKYLADAGHKPLLLEARDVL----------------------VGAYPN 98
           VIAGAGLAGLSTAKYLADAGHKPLLLEARDVL                       GAYPN
Sbjct: 84  VIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN 143

Query: 99  IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTW 158
           IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTW
Sbjct: 144 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTW 203

Query: 159 PEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPD 218
           PEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPD
Sbjct: 204 PEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPD 263

Query: 219 ELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIEL 278
           ELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIEL
Sbjct: 264 ELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIEL 323

Query: 279 NDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH 338
           NDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH
Sbjct: 324 NDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH 383

Query: 339 IWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSE 398
           IWFDRKLKNTYDHLLFSRS LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSE
Sbjct: 384 IWFDRKLKNTYDHLLFSRSPLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSE 443

Query: 399 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFY 458
           IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFY
Sbjct: 444 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFY 503

Query: 459 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 508
           LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP
Sbjct: 504 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 553

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|350541931|gb|AEQ29521.1| phytoene desaturase [Citrus x paradisi] Back     alignment and taxonomy information
>gi|350541935|gb|AEQ29523.1| phytoene desaturase [Citrus x paradisi] Back     alignment and taxonomy information
>gi|350541937|gb|AEQ29524.1| phytoene desaturase [Citrus sinensis] Back     alignment and taxonomy information
>gi|13991882|gb|AAK51545.1| phytoene desaturase [Citrus x paradisi] Back     alignment and taxonomy information
>gi|190576745|gb|ACE79168.1| phytoene desaturase [Citrus maxima] Back     alignment and taxonomy information
>gi|25518260|pir||JC7723 phytoene desaturase (EC 1.14.99.-) 1 - citrus gi|9757659|dbj|BAB08179.1| phytoene desaturase [Citrus unshiu] gi|18073984|emb|CAC85666.1| phytoene desaturase [Citrus sinensis] gi|82394889|gb|ABB72445.1| phytoene desaturase [Citrus sinensis] Back     alignment and taxonomy information
>gi|350541939|gb|AEQ29525.1| phytoene desaturase [Citrus sinensis] Back     alignment and taxonomy information
>gi|350541925|gb|AEQ29518.1| phytoene desaturase [Citrus sinensis] Back     alignment and taxonomy information
>gi|350541927|gb|AEQ29519.1| phytoene desaturase [Citrus sinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
TAIR|locus:2129515566 PDS3 "phytoene desaturase 3" [ 0.818 0.734 0.865 5.1e-234
TAIR|locus:2114789558 ZDS "zeta-carotene desaturase" 0.421 0.383 0.314 3.9e-29
TAIR|locus:2077670488 PAO3 "polyamine oxidase 3" [Ar 0.415 0.432 0.227 9.6e-10
TAIR|locus:2018571497 PAO4 "polyamine oxidase 4" [Ar 0.425 0.434 0.222 6.8e-08
TAIR|locus:2053723490 PAO2 "AT2G43020" [Arabidopsis 0.401 0.416 0.241 3.7e-07
TIGR_CMR|SPO_3597449 SPO_3597 "amine oxidase, flavi 0.078 0.089 0.439 0.00014
UNIPROTKB|Q81RW3478 BAS1785 "Amine oxidase, flavin 0.100 0.106 0.372 0.00019
TIGR_CMR|BA_1924478 BA_1924 "amine oxidase, flavin 0.100 0.106 0.372 0.00019
UNIPROTKB|O69694602 Rv3727 "Oxidoreductase" [Mycob 0.242 0.204 0.259 0.00019
RGD|2321736 642 LOC100360621 "rCG53598-like" [ 0.208 0.165 0.35 0.0002
TAIR|locus:2129515 PDS3 "phytoene desaturase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1946 (690.1 bits), Expect = 5.1e-234, Sum P(2) = 5.1e-234
 Identities = 360/416 (86%), Positives = 399/416 (95%)

Query:    91 VLVGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAIL 150
             +  GAYPN+QNLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDFP+VLPAPLNGI AIL
Sbjct:   148 IFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAIL 207

Query:   151 RNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSK 210
             RNNEMLTWPEK+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSK
Sbjct:   208 RNNEMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSK 267

Query:   211 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 270
             ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LN
Sbjct:   268 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLN 327

Query:   271 SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLV 330
             SR++KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLV
Sbjct:   328 SRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLV 387

Query:   331 GVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEE 390
             GVPVIN+HIWFDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAPAEE
Sbjct:   388 GVPVINVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEE 447

Query:   391 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 450
             WIS +DS+IIDATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQ
Sbjct:   448 WISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQ 507

Query:   451 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
             RSP+EGFYLAGDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G  +L+EA++
Sbjct:   508 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
GO:0009507 "chloroplast" evidence=ISM;IDA;TAS
GO:0009536 "plastid" evidence=IEA
GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IDA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009534 "chloroplast thylakoid" evidence=IDA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
GO:0016120 "carotene biosynthetic process" evidence=IDA
GO:0016166 "phytoene dehydrogenase activity" evidence=IDA
TAIR|locus:2114789 ZDS "zeta-carotene desaturase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077670 PAO3 "polyamine oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018571 PAO4 "polyamine oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053723 PAO2 "AT2G43020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3597 SPO_3597 "amine oxidase, flavin-containing" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q81RW3 BAS1785 "Amine oxidase, flavin-containing" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_1924 BA_1924 "amine oxidase, flavin-containing" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|O69694 Rv3727 "Oxidoreductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)] Back     alignment and assigned GO terms
RGD|2321736 LOC100360621 "rCG53598-like" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P80093PDS_CAPAN1, ., 3, ., 5, ., 50.79880.99600.8694N/Ano
P49086CRTI_MAIZE1, ., 1, 4, ., 9, 9, ., -0.80310.94680.8423N/Ano
P26294PDS_SYNE71, ., 3, ., 5, ., 50.58900.87990.9430yesno
P29273CRTI_SYNY31, ., 1, 4, ., 9, 9, ., -0.60210.84640.9110N/Ano
Q40406CRTI_NARPS1, ., 1, 4, ., 9, 9, ., -0.8140.94090.8385N/Ano
P28554CRTI_SOLLC1, ., 1, 4, ., 9, 9, ., -0.80450.99600.8679N/Ano
Q0DUI8CRTI_ORYSJ1, ., 1, 4, ., 9, 9, ., -0.80070.97240.8546yesno
Q07356PDS_ARATH1, ., 3, ., 5, ., 50.81170.98810.8869yesno
P28553CRTI_SOYBN1, ., 1, 4, ., 9, 9, ., -0.81090.99600.8877yesno
A2XDA1CRTI_ORYSI1, ., 1, 4, ., 9, 9, ., -0.80070.97240.8546N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.99LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PDS1
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (582 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00018857001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (396 aa)
•••  •• 0.968
GSVIVG00024765001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (389 aa)
•••  •• 0.967
GSVIVG00027139001
SubName- Full=Chromosome chr8 scaffold_41, whole genome shotgun sequence; (569 aa)
  •  •••0.964
GSVIVG00023494001
SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (437 aa)
•••  •• 0.960
GSVIVG00031131001
SubName- Full=Chromosome chr14 scaffold_54, whole genome shotgun sequence; (583 aa)
  •  •••0.917
ZEP
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (658 aa)
      • 0.483
BR6OX1
SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (312 aa)
      • 0.480
GSVIVG00016085001
SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (471 aa)
   •  • 0.480
GSVIVG00006255001
SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (442 aa)
  •     0.455
GSVIVG00032312001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (356 aa)
  ••    0.454

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
PLN02612567 PLN02612, PLN02612, phytoene desaturase 0.0
TIGR02731453 TIGR02731, phytoene_desat, phytoene desaturase 0.0
COG3349485 COG3349, COG3349, Uncharacterized conserved protei 1e-124
pfam01593444 pfam01593, Amino_oxidase, Flavin containing amine 9e-87
TIGR02732474 TIGR02732, zeta_caro_desat, 9,9'-di-cis-zeta-carot 3e-81
PLN02487569 PLN02487, PLN02487, zeta-carotene desaturase 8e-73
TIGR03467411 TIGR03467, HpnE, squalene-associated FAD-dependent 2e-36
PRK07233434 PRK07233, PRK07233, hypothetical protein; Provisio 5e-27
COG1232444 COG1232, HemY, Protoporphyrinogen oxidase [Coenzym 3e-12
COG0654387 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox 2e-07
PLN02268435 PLN02268, PLN02268, probable polyamine oxidase 2e-07
pfam1345066 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann- 7e-07
COG1233487 COG1233, COG1233, Phytoene dehydrogenase and relat 1e-06
COG2907447 COG2907, COG2907, Predicted NAD/FAD-binding protei 2e-06
pfam01266234 pfam01266, DAO, FAD dependent oxidoreductase 5e-06
COG0492305 COG0492, TrxB, Thioredoxin reductase [Posttranslat 5e-06
COG0665387 COG0665, DadA, Glycine/D-amino acid oxidases (deam 3e-05
COG1231450 COG1231, COG1231, Monoamine oxidase [Amino acid tr 7e-05
COG0644396 COG0644, FixC, Dehydrogenases (flavoproteins) [Ene 9e-05
PRK04176257 PRK04176, PRK04176, ribulose-1,5-biphosphate synth 1e-04
pfam07992283 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp 1e-04
TIGR02032295 TIGR02032, GG-red-SF, geranylgeranyl reductase fam 3e-04
TIGR02734502 TIGR02734, crtI_fam, phytoene desaturase 4e-04
TIGR00562462 TIGR00562, proto_IX_ox, protoporphyrinogen oxidase 4e-04
PLN02576496 PLN02576, PLN02576, protoporphyrinogen oxidase 4e-04
PRK11883451 PRK11883, PRK11883, protoporphyrinogen oxidase; Re 4e-04
COG1635262 COG1635, THI4, Ribulose 1,5-bisphosphate synthetas 9e-04
PLN02676487 PLN02676, PLN02676, polyamine oxidase 0.001
pfam01266234 pfam01266, DAO, FAD dependent oxidoreductase 0.002
TIGR03997645 TIGR03997, mycofact_OYE_2, mycofactocin system Fad 0.002
pfam0007082 pfam00070, Pyr_redox, Pyridine nucleotide-disulphi 0.002
COG2509486 COG2509, COG2509, Uncharacterized FAD-dependent de 0.002
PRK12834549 PRK12834, PRK12834, putative FAD-binding dehydroge 0.003
cd0519186 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding do 0.004
pfam00890401 pfam00890, FAD_binding_2, FAD binding domain 0.004
PRK06475400 PRK06475, PRK06475, salicylate hydroxylase; Provis 0.004
PRK07208479 PRK07208, PRK07208, hypothetical protein; Provisio 0.004
>gnl|CDD|215330 PLN02612, PLN02612, phytoene desaturase Back     alignment and domain information 
 Score = 1052 bits (2723), Expect = 0.0
 Identities = 436/534 (81%), Positives = 478/534 (89%), Gaps = 28/534 (5%)

Query: 1   MGQSLKIRVKTGTRK------GFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRP 54
           MG SL++   + +R       G  P +VVCVDYPRP+++NT NFLEAA LS+SFR++PRP
Sbjct: 31  MGHSLRVPTSSSSRTRRRRNSGRGPLQVVCVDYPRPELENTVNFLEAAALSASFRSAPRP 90

Query: 55  SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL---------------------- 92
           +KPLKVVIAGAGLAGLSTAKYLADAGHKP+LLEARDVL                      
Sbjct: 91  AKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIF 150

Query: 93  VGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRN 152
            GAYPN+QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGI AILRN
Sbjct: 151 FGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRN 210

Query: 153 NEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKAL 212
           NEMLTWPEK+KFAIGLLPAI+GGQAYVEAQDGL+V+EWMRKQGVPDRV  EVFIAMSKAL
Sbjct: 211 NEMLTWPEKIKFAIGLLPAIVGGQAYVEAQDGLSVKEWMRKQGVPDRVNDEVFIAMSKAL 270

Query: 213 NFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSR 272
           NFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H QSLGGEVRLNSR
Sbjct: 271 NFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHFQSLGGEVRLNSR 330

Query: 273 VQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 332
           ++KIELNDDGTVK+FLLTNG+V++GD YV ATPVDILKL LP+ WKE+ YFK+L+KLVGV
Sbjct: 331 IKKIELNDDGTVKHFLLTNGSVVEGDVYVSATPVDILKLLLPDQWKEIPYFKKLDKLVGV 390

Query: 333 PVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI 392
           PVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS TCKEYY+PN+SMLELVFAPAEEWI
Sbjct: 391 PVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSTTCKEYYDPNKSMLELVFAPAEEWI 450

Query: 393 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRS 452
           S SD +IIDATMKELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRPLQRS
Sbjct: 451 SRSDEDIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRS 510

Query: 453 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 506
           P+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ+IVQDY LLAARG  +L+EA++
Sbjct: 511 PIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYELLAARGPRKLSEATV 564

Length = 567
>gnl|CDD|131778 TIGR02731, phytoene_desat, phytoene desaturase Back     alignment and domain information
>gnl|CDD|225885 COG3349, COG3349, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|216593 pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase Back     alignment and domain information
>gnl|CDD|131779 TIGR02732, zeta_caro_desat, 9,9'-di-cis-zeta-carotene desaturase Back     alignment and domain information
>gnl|CDD|215268 PLN02487, PLN02487, zeta-carotene desaturase Back     alignment and domain information
>gnl|CDD|234221 TIGR03467, HpnE, squalene-associated FAD-dependent desaturase Back     alignment and domain information
>gnl|CDD|235977 PRK07233, PRK07233, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|224153 COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|177909 PLN02268, PLN02268, probable polyamine oxidase Back     alignment and domain information
>gnl|CDD|205628 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain Back     alignment and domain information
>gnl|CDD|224154 COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|225459 COG2907, COG2907, Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|223566 COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|223737 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|224152 COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235241 PRK04176, PRK04176, ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|233693 TIGR02032, GG-red-SF, geranylgeranyl reductase family Back     alignment and domain information
>gnl|CDD|233988 TIGR02734, crtI_fam, phytoene desaturase Back     alignment and domain information
>gnl|CDD|213540 TIGR00562, proto_IX_ox, protoporphyrinogen oxidase Back     alignment and domain information
>gnl|CDD|215314 PLN02576, PLN02576, protoporphyrinogen oxidase Back     alignment and domain information
>gnl|CDD|237009 PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>gnl|CDD|224550 COG1635, THI4, Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215362 PLN02676, PLN02676, polyamine oxidase Back     alignment and domain information
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|234436 TIGR03997, mycofact_OYE_2, mycofactocin system FadH/OYE family oxidoreductase 2 Back     alignment and domain information
>gnl|CDD|215691 pfam00070, Pyr_redox, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|225307 COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|183782 PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|133449 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>gnl|CDD|216176 pfam00890, FAD_binding_2, FAD binding domain Back     alignment and domain information
>gnl|CDD|180582 PRK06475, PRK06475, salicylate hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|235967 PRK07208, PRK07208, hypothetical protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 508
PLN02612567 phytoene desaturase 100.0
TIGR02731453 phytoene_desat phytoene desaturase. Plants and cya 100.0
PLN02487569 zeta-carotene desaturase 100.0
TIGR02732474 zeta_caro_desat carotene 7,8-desaturase. Carotene 100.0
PRK07233434 hypothetical protein; Provisional 100.0
PRK12416463 protoporphyrinogen oxidase; Provisional 100.0
TIGR00562462 proto_IX_ox protoporphyrinogen oxidase. This prote 100.0
COG1232444 HemY Protoporphyrinogen oxidase [Coenzyme metaboli 100.0
PLN02576496 protoporphyrinogen oxidase 100.0
COG3349485 Uncharacterized conserved protein [Function unknow 100.0
PRK11883451 protoporphyrinogen oxidase; Reviewed 100.0
COG1231450 Monoamine oxidase [Amino acid transport and metabo 100.0
PLN02268435 probable polyamine oxidase 100.0
PRK07208479 hypothetical protein; Provisional 100.0
TIGR03467419 HpnE squalene-associated FAD-dependent desaturase. 100.0
PLN02676487 polyamine oxidase 100.0
PLN02529 738 lysine-specific histone demethylase 1 99.98
PLN02568539 polyamine oxidase 99.98
PLN02328 808 lysine-specific histone demethylase 1 homolog 99.97
KOG0029501 consensus Amine oxidase [Secondary metabolites bio 99.97
PLN03000 881 amine oxidase 99.97
PLN02976 1713 amine oxidase 99.97
TIGR02733492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 99.97
TIGR02734502 crtI_fam phytoene desaturase. Phytoene is converte 99.97
TIGR02730493 carot_isom carotene isomerase. Members of this fam 99.97
KOG0685498 consensus Flavin-containing amine oxidase [Coenzym 99.96
PF01593450 Amino_oxidase: Flavin containing amine oxidoreduct 99.95
KOG1276491 consensus Protoporphyrinogen oxidase [Coenzyme tra 99.94
KOG4254561 consensus Phytoene desaturase [Coenzyme transport 99.92
COG1233487 Phytoene dehydrogenase and related proteins [Secon 99.91
COG2907447 Predicted NAD/FAD-binding protein [General functio 99.89
COG3380331 Predicted NAD/FAD-dependent oxidoreductase [Genera 99.88
PRK13977576 myosin-cross-reactive antigen; Provisional 99.82
TIGR03329460 Phn_aa_oxid putative aminophosphonate oxidoreducta 99.77
COG2081408 Predicted flavoproteins [General function predicti 99.76
TIGR01373407 soxB sarcosine oxidase, beta subunit family, heter 99.73
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 99.7
KOG2820399 consensus FAD-dependent oxidoreductase [General fu 99.67
PTZ00363443 rab-GDP dissociation inhibitor; Provisional 99.67
PRK00711416 D-amino acid dehydrogenase small subunit; Validate 99.65
PRK12409410 D-amino acid dehydrogenase small subunit; Provisio 99.64
PF03486409 HI0933_like: HI0933-like protein; InterPro: IPR004 99.64
TIGR01377380 soxA_mon sarcosine oxidase, monomeric form. Sarcos 99.63
COG0665387 DadA Glycine/D-amino acid oxidases (deaminating) [ 99.62
PRK11259376 solA N-methyltryptophan oxidase; Provisional 99.62
PLN02464 627 glycerol-3-phosphate dehydrogenase 99.57
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.57
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.57
PRK01747662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 99.56
KOG2853509 consensus Possible oxidoreductase [General functio 99.56
PRK07045388 putative monooxygenase; Reviewed 99.55
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 99.55
PRK10157428 putative oxidoreductase FixC; Provisional 99.55
PRK10015429 oxidoreductase; Provisional 99.54
PRK11101 546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 99.53
PRK06847375 hypothetical protein; Provisional 99.51
PLN02463447 lycopene beta cyclase 99.51
TIGR03364365 HpnW_proposed FAD dependent oxidoreductase TIGR033 99.51
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 99.51
PLN02697529 lycopene epsilon cyclase 99.51
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 99.51
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 99.5
COG0579429 Predicted dehydrogenase [General function predicti 99.5
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 99.5
PRK11728393 hydroxyglutarate oxidase; Provisional 99.49
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 99.49
PRK13369502 glycerol-3-phosphate dehydrogenase; Provisional 99.49
PRK06185407 hypothetical protein; Provisional 99.48
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 99.48
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.48
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 99.48
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 99.47
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.47
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.47
PRK07190 487 hypothetical protein; Provisional 99.47
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 99.46
PRK08013400 oxidoreductase; Provisional 99.46
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.46
PRK06184502 hypothetical protein; Provisional 99.46
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 99.46
PRK09126392 hypothetical protein; Provisional 99.46
PF06100500 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross 99.46
COG0578 532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 99.45
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 99.45
PRK12266508 glpD glycerol-3-phosphate dehydrogenase; Reviewed 99.45
PRK06183538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 99.45
PRK06834 488 hypothetical protein; Provisional 99.44
PRK08244493 hypothetical protein; Provisional 99.44
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 99.44
PRK07588391 hypothetical protein; Provisional 99.43
TIGR00031377 UDP-GALP_mutase UDP-galactopyranose mutase. The ge 99.43
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 99.43
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 99.43
PTZ00383497 malate:quinone oxidoreductase; Provisional 99.42
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.42
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.4
PRK06126545 hypothetical protein; Provisional 99.4
PRK08132547 FAD-dependent oxidoreductase; Provisional 99.4
PRK11445351 putative oxidoreductase; Provisional 99.4
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 99.39
PRK05192 618 tRNA uridine 5-carboxymethylaminomethyl modificati 99.38
PF01946230 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K. 99.37
PRK06996398 hypothetical protein; Provisional 99.37
KOG2844 856 consensus Dimethylglycine dehydrogenase precursor 99.35
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 99.35
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 99.33
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 99.33
PRK07121492 hypothetical protein; Validated 99.33
PRK05868372 hypothetical protein; Validated 99.32
PRK06481506 fumarate reductase flavoprotein subunit; Validated 99.32
PRK08294 634 phenol 2-monooxygenase; Provisional 99.3
PRK08274466 tricarballylate dehydrogenase; Validated 99.27
PRK07573 640 sdhA succinate dehydrogenase flavoprotein subunit; 99.27
PLN02985514 squalene monooxygenase 99.27
TIGR01813439 flavo_cyto_c flavocytochrome c. This model describ 99.26
PRK08163396 salicylate hydroxylase; Provisional 99.26
PRK06475400 salicylate hydroxylase; Provisional 99.25
PRK08958 588 sdhA succinate dehydrogenase flavoprotein subunit; 99.25
PLN02661357 Putative thiazole synthesis 99.25
PRK07538413 hypothetical protein; Provisional 99.24
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 99.24
TIGR00136 617 gidA glucose-inhibited division protein A. GidA, t 99.24
PRK07804 541 L-aspartate oxidase; Provisional 99.23
PRK13339497 malate:quinone oxidoreductase; Reviewed 99.23
PTZ00139 617 Succinate dehydrogenase [ubiquinone] flavoprotein 99.23
TIGR01320483 mal_quin_oxido malate:quinone-oxidoreductase. This 99.22
PLN00128 635 Succinate dehydrogenase [ubiquinone] flavoprotein 99.22
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 99.22
PRK09078 598 sdhA succinate dehydrogenase flavoprotein subunit; 99.22
PRK06175433 L-aspartate oxidase; Provisional 99.22
PRK05257494 malate:quinone oxidoreductase; Validated 99.22
PRK07057 591 sdhA succinate dehydrogenase flavoprotein subunit; 99.2
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 99.2
PRK07236386 hypothetical protein; Provisional 99.19
PRK06452 566 sdhA succinate dehydrogenase flavoprotein subunit; 99.17
PRK07395 553 L-aspartate oxidase; Provisional 99.17
PLN02815 594 L-aspartate oxidase 99.16
PLN02172461 flavin-containing monooxygenase FMO GS-OX 99.15
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 99.15
PRK08401466 L-aspartate oxidase; Provisional 99.15
PRK12845564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 99.14
COG2072443 TrkA Predicted flavoprotein involved in K+ transpo 99.14
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 99.14
PLN02927 668 antheraxanthin epoxidase/zeaxanthin epoxidase 99.13
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 99.13
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 99.13
PRK08205 583 sdhA succinate dehydrogenase flavoprotein subunit; 99.12
PRK12835 584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 99.12
TIGR01812 566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 99.12
TIGR02352337 thiamin_ThiO glycine oxidase ThiO. This family con 99.12
PRK12844557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 99.12
PRK07803 626 sdhA succinate dehydrogenase flavoprotein subunit; 99.12
PRK05945 575 sdhA succinate dehydrogenase flavoprotein subunit; 99.11
PRK12839572 hypothetical protein; Provisional 99.11
TIGR00551488 nadB L-aspartate oxidase. L-aspartate oxidase is t 99.1
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 99.1
PRK06134 581 putative FAD-binding dehydrogenase; Reviewed 99.1
PRK06069 577 sdhA succinate dehydrogenase flavoprotein subunit; 99.09
TIGR00275400 flavoprotein, HI0933 family. The model when search 99.09
PRK08275 554 putative oxidoreductase; Provisional 99.09
PF00996438 GDI: GDP dissociation inhibitor; InterPro: IPR0182 99.08
TIGR01811 603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 99.08
PRK08626 657 fumarate reductase flavoprotein subunit; Provision 99.07
PRK05329422 anaerobic glycerol-3-phosphate dehydrogenase subun 99.07
PRK06263 543 sdhA succinate dehydrogenase flavoprotein subunit; 99.07
PTZ00367567 squalene epoxidase; Provisional 99.07
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 99.07
PRK08641 589 sdhA succinate dehydrogenase flavoprotein subunit; 99.07
TIGR02485432 CobZ_N-term precorrin 3B synthase CobZ. CobZ is es 99.06
PRK06753373 hypothetical protein; Provisional 99.05
PRK08071 510 L-aspartate oxidase; Provisional 99.04
PRK06854 608 adenylylsulfate reductase subunit alpha; Validated 99.04
PRK07512 513 L-aspartate oxidase; Provisional 99.04
PRK12842574 putative succinate dehydrogenase; Reviewed 99.03
PRK09231 582 fumarate reductase flavoprotein subunit; Validated 99.03
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 99.02
PRK12843578 putative FAD-binding dehydrogenase; Reviewed 99.02
PF1345068 NAD_binding_8: NAD(P)-binding Rossmann-like domain 99.02
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 99.02
PRK07843557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 99.01
TIGR03219414 salicylate_mono salicylate 1-monooxygenase. Member 99.01
KOG0042 680 consensus Glycerol-3-phosphate dehydrogenase [Ener 99.0
COG2509486 Uncharacterized FAD-dependent dehydrogenases [Gene 99.0
TIGR01176 580 fum_red_Fp fumarate reductase, flavoprotein subuni 99.0
PF12831428 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 99.0
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 98.99
PF01134392 GIDA: Glucose inhibited division protein A; InterP 98.98
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 98.98
TIGR03197381 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri 98.97
PTZ00306 1167 NADH-dependent fumarate reductase; Provisional 98.97
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 98.97
PRK12837513 3-ketosteroid-delta-1-dehydrogenase; Provisional 98.96
KOG2852380 consensus Possible oxidoreductase [General functio 98.96
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 98.96
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 98.96
PF13454156 NAD_binding_9: FAD-NAD(P)-binding 98.95
PRK12834549 putative FAD-binding dehydrogenase; Reviewed 98.94
PF06039488 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro 98.93
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 98.93
PRK09077 536 L-aspartate oxidase; Provisional 98.92
COG0029 518 NadB Aspartate oxidase [Coenzyme metabolism] 98.92
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 98.92
PRK12831464 putative oxidoreductase; Provisional 98.91
TIGR02061 614 aprA adenosine phosphosulphate reductase, alpha su 98.91
PRK12779 944 putative bifunctional glutamate synthase subunit b 98.91
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 98.9
KOG2415 621 consensus Electron transfer flavoprotein ubiquinon 98.9
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 98.89
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 98.89
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 98.88
PRK06116450 glutathione reductase; Validated 98.88
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 98.86
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 98.85
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 98.85
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 98.84
PRK05976472 dihydrolipoamide dehydrogenase; Validated 98.84
KOG1399448 consensus Flavin-containing monooxygenase [Seconda 98.84
COG0562374 Glf UDP-galactopyranose mutase [Cell envelope biog 98.83
PTZ00058561 glutathione reductase; Provisional 98.81
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 98.8
PRK06327475 dihydrolipoamide dehydrogenase; Validated 98.8
PLN02546558 glutathione reductase 98.78
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 98.77
PRK06370463 mercuric reductase; Validated 98.77
PRK09897 534 hypothetical protein; Provisional 98.77
PLN02507499 glutathione reductase 98.76
KOG2404477 consensus Fumarate reductase, flavoprotein subunit 98.76
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 98.76
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 98.75
KOG1298509 consensus Squalene monooxygenase [Lipid transport 98.75
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 98.74
PRK10262321 thioredoxin reductase; Provisional 98.74
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 98.73
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 98.72
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 98.71
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 98.71
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 98.71
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 98.71
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 98.7
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 98.69
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 98.68
PRK14989 847 nitrite reductase subunit NirD; Provisional 98.68
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 98.68
PRK12809639 putative oxidoreductase Fe-S binding subunit; Revi 98.68
PRK098531019 putative selenate reductase subunit YgfK; Provisio 98.67
PRK14694468 putative mercuric reductase; Provisional 98.67
PRK06292460 dihydrolipoamide dehydrogenase; Validated 98.67
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 98.66
PRK07845466 flavoprotein disulfide reductase; Reviewed 98.65
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 98.63
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 98.6
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 98.6
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 98.57
PRK06370463 mercuric reductase; Validated 98.55
PRK09564444 coenzyme A disulfide reductase; Reviewed 98.54
TIGR02462544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 98.53
PRK13748561 putative mercuric reductase; Provisional 98.53
COG1053 562 SdhA Succinate dehydrogenase/fumarate reductase, f 98.53
PTZ00318424 NADH dehydrogenase-like protein; Provisional 98.52
PRK09564444 coenzyme A disulfide reductase; Reviewed 98.52
TIGR02053463 MerA mercuric reductase. This model represents the 98.51
TIGR02053463 MerA mercuric reductase. This model represents the 98.51
KOG2665453 consensus Predicted FAD-dependent oxidoreductase [ 98.5
PRK02106 560 choline dehydrogenase; Validated 98.5
TIGR01810532 betA choline dehydrogenase. This enzyme is a membe 98.49
PRK14989 847 nitrite reductase subunit NirD; Provisional 98.49
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 98.49
COG3573552 Predicted oxidoreductase [General function predict 98.48
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 98.48
PRK07845466 flavoprotein disulfide reductase; Reviewed 98.46
PTZ00052499 thioredoxin reductase; Provisional 98.46
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 98.45
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 98.45
PRK05976472 dihydrolipoamide dehydrogenase; Validated 98.45
PRK12771564 putative glutamate synthase (NADPH) small subunit; 98.45
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 98.44
PTZ00153659 lipoamide dehydrogenase; Provisional 98.43
PRK13512438 coenzyme A disulfide reductase; Provisional 98.42
COG0445 621 GidA Flavin-dependent tRNA uridine 5-carboxymethyl 98.42
PRK13984604 putative oxidoreductase; Provisional 98.41
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 98.41
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 98.39
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 98.39
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 98.39
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 98.39
PRK07846451 mycothione reductase; Reviewed 98.38
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 98.37
COG4716587 Myosin-crossreactive antigen [Function unknown] 98.36
PRK06116450 glutathione reductase; Validated 98.35
PLN02507499 glutathione reductase 98.35
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 98.34
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 98.33
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 98.31
TIGR03377 516 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase 98.3
PRK07846 451 mycothione reductase; Reviewed 98.29
PTZ00058561 glutathione reductase; Provisional 98.29
COG4529474 Uncharacterized protein conserved in bacteria [Fun 98.29
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 98.28
PRK12770352 putative glutamate synthase subunit beta; Provisio 98.28
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 98.28
PLN02785587 Protein HOTHEAD 98.27
TIGR03452 452 mycothione_red mycothione reductase. Mycothiol, a 98.25
PRK14727479 putative mercuric reductase; Provisional 98.25
PRK13512438 coenzyme A disulfide reductase; Provisional 98.23
PRK14694468 putative mercuric reductase; Provisional 98.22
KOG1439440 consensus RAB proteins geranylgeranyltransferase c 98.21
PRK06327475 dihydrolipoamide dehydrogenase; Validated 98.2
KOG0405478 consensus Pyridine nucleotide-disulphide oxidoredu 98.2
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 98.18
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 98.16
PTZ00318424 NADH dehydrogenase-like protein; Provisional 98.15
PLN02852491 ferredoxin-NADP+ reductase 98.15
PTZ00153659 lipoamide dehydrogenase; Provisional 98.14
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 98.14
COG2303542 BetA Choline dehydrogenase and related flavoprotei 98.13
COG1148622 HdrA Heterodisulfide reductase, subunit A and rela 98.13
PRK13748561 putative mercuric reductase; Provisional 98.12
PTZ00052499 thioredoxin reductase; Provisional 98.11
PRK05335436 tRNA (uracil-5-)-methyltransferase Gid; Reviewed 98.1
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 98.08
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 98.08
KOG3923342 consensus D-aspartate oxidase [Amino acid transpor 98.07
PLN02546558 glutathione reductase 98.06
PRK06567 1028 putative bifunctional glutamate synthase subunit b 98.01
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 97.97
PRK10262321 thioredoxin reductase; Provisional 97.96
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 97.96
PRK14727479 putative mercuric reductase; Provisional 97.96
KOG2960328 consensus Protein involved in thiamine biosynthesi 97.94
PTZ00188506 adrenodoxin reductase; Provisional 97.93
COG5044434 MRS6 RAB proteins geranylgeranyltransferase compon 97.92
PRK06292460 dihydrolipoamide dehydrogenase; Validated 97.92
PRK05675 570 sdhA succinate dehydrogenase flavoprotein subunit; 97.9
KOG2311 679 consensus NAD/FAD-utilizing protein possibly invol 97.89
TIGR00137433 gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo 97.88
PRK12814652 putative NADPH-dependent glutamate synthase small 97.88
KOG0404322 consensus Thioredoxin reductase [Posttranslational 97.85
PRK12770352 putative glutamate synthase subunit beta; Provisio 97.83
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 97.83
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 97.77
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 97.75
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 97.71
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 97.7
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 97.65
PF07156368 Prenylcys_lyase: Prenylcysteine lyase; InterPro: I 97.63
TIGR03862376 flavo_PP4765 uncharacterized flavoprotein, PP_4765 97.62
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 97.57
KOG3851446 consensus Sulfide:quinone oxidoreductase/flavo-bin 97.51
KOG03992142 consensus Glutamate synthase [Amino acid transport 97.51
KOG1238 623 consensus Glucose dehydrogenase/choline dehydrogen 97.47
KOG1800468 consensus Ferredoxin/adrenodoxin reductase [Nucleo 97.4
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 97.39
COG1206439 Gid NAD(FAD)-utilizing enzyme possibly involved in 97.25
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 97.18
TIGR01816 565 sdhA_forward succinate dehydrogenase, flavoprotein 97.09
KOG1346659 consensus Programmed cell death 8 (apoptosis-induc 97.08
KOG4405547 consensus GDP dissociation inhibitor [Signal trans 97.07
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 97.04
KOG4716503 consensus Thioredoxin reductase [Posttranslational 96.99
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 96.92
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 96.88
PRK098531019 putative selenate reductase subunit YgfK; Provisio 96.88
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 96.78
PRK12814652 putative NADPH-dependent glutamate synthase small 96.7
KOG2755334 consensus Oxidoreductase [General function predict 96.66
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 96.5
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 96.49
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 96.45
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 96.42
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 96.36
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 96.35
PRK01438480 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 96.33
PLN02172461 flavin-containing monooxygenase FMO GS-OX 96.3
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 96.11
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 95.97
PRK02705459 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 95.97
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 95.91
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 95.88
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 95.79
COG0569225 TrkA K+ transport systems, NAD-binding component [ 95.78
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.74
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 95.65
PRK12831464 putative oxidoreductase; Provisional 95.59
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 95.58
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 95.49
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.49
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 95.49
PRK06249313 2-dehydropantoate 2-reductase; Provisional 95.36
COG0446 415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 95.28
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 95.26
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.19
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.16
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 95.16
PRK14106450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 95.14
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.0
PLN02852491 ferredoxin-NADP+ reductase 94.96
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 94.93
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 94.92
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 94.79
PRK05708305 2-dehydropantoate 2-reductase; Provisional 94.79
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 94.72
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 94.66
PRK065671028 putative bifunctional glutamate synthase subunit b 94.59
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 94.58
PRK06718202 precorrin-2 dehydrogenase; Reviewed 94.48
COG1004414 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en 94.47
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 94.45
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 94.43
PRK11064415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 94.38
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 94.37
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 94.34
PRK04148134 hypothetical protein; Provisional 94.34
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 94.34
PRK06719157 precorrin-2 dehydrogenase; Validated 94.32
PRK08229341 2-dehydropantoate 2-reductase; Provisional 94.29
PRK12921305 2-dehydropantoate 2-reductase; Provisional 94.19
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 94.16
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 94.15
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 94.14
KOG2304298 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t 94.12
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 94.08
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 93.99
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 93.94
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 93.94
KOG4716503 consensus Thioredoxin reductase [Posttranslational 93.82
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 93.76
COG0771448 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas 93.66
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 93.64
PRK08268507 3-hydroxy-acyl-CoA dehydrogenase; Validated 93.57
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 93.49
TIGR02279503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 93.47
TIGR03026411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 93.42
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 93.4
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 93.35
PRK04690468 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 93.29
PTZ00082321 L-lactate dehydrogenase; Provisional 93.28
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 93.26
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 93.23
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 93.19
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 93.12
COG1250307 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo 93.1
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 93.07
cd05293312 LDH_1 A subgroup of L-lactate dehydrogenases. L-la 93.04
PRK02472447 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 93.04
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 93.03
PRK06223307 malate dehydrogenase; Reviewed 92.96
PRK04308445 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 92.96
PRK01710458 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 92.92
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 92.85
PRK07531495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 92.8
PRK03369488 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 92.75
PRK11730715 fadB multifunctional fatty acid oxidation complex 92.74
PRK12549284 shikimate 5-dehydrogenase; Reviewed 92.71
TIGR02437714 FadB fatty oxidation complex, alpha subunit FadB. 92.68
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 92.6
PRK07417279 arogenate dehydrogenase; Reviewed 92.54
PRK00421461 murC UDP-N-acetylmuramate--L-alanine ligase; Provi 92.49
PRK12779944 putative bifunctional glutamate synthase subunit b 92.44
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 92.39
PLN02353473 probable UDP-glucose 6-dehydrogenase 92.28
PRK15057388 UDP-glucose 6-dehydrogenase; Provisional 92.19
PTZ00117319 malate dehydrogenase; Provisional 92.18
PRK08306296 dipicolinate synthase subunit A; Reviewed 92.15
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 92.1
TIGR02441737 fa_ox_alpha_mit fatty acid oxidation complex, alph 92.06
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 92.01
COG1893307 ApbA Ketopantoate reductase [Coenzyme metabolism] 91.95
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 91.92
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 91.92
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 91.78
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 91.78
PRK15116268 sulfur acceptor protein CsdL; Provisional 91.74
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 91.69
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 91.52
PRK01368454 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 91.51
PRK00683418 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 91.51
PRK12548289 shikimate 5-dehydrogenase; Provisional 91.46
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 91.46
cd01339300 LDH-like_MDH L-lactate dehydrogenase-like malate d 91.45
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 91.44
PRK00141473 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 91.42
TIGR02440699 FadJ fatty oxidation complex, alpha subunit FadJ. 91.33
PRK02006498 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 91.24
PF13478136 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2 91.17
cd05290307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 91.14
TIGR00507270 aroE shikimate 5-dehydrogenase. This model finds p 91.12
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 91.09
PRK11199374 tyrA bifunctional chorismate mutase/prephenate deh 91.09
TIGR01505291 tartro_sem_red 2-hydroxy-3-oxopropionate reductase 91.08
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 91.04
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 90.92
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 90.9
PRK11154708 fadJ multifunctional fatty acid oxidation complex 90.82
KOG1346 659 consensus Programmed cell death 8 (apoptosis-induc 90.77
PRK03803448 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 90.65
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 90.64
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 90.63
PLN02695370 GDP-D-mannose-3',5'-epimerase 90.59
PRK15461296 NADH-dependent gamma-hydroxybutyrate dehydrogenase 90.54
cd01483143 E1_enzyme_family Superfamily of activating enzymes 90.51
>PLN02612 phytoene desaturase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-53  Score=430.41  Aligned_cols=491  Identities=88%  Similarity=1.394  Sum_probs=403.8

Q ss_pred             CCCCcccccccCCCCCCCCCcchhhhccccCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCC-
Q 010539           16 GFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVG-   94 (508)
Q Consensus        16 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g-   94 (508)
                      +..|+..-|+++|.|....+.+|-........+...|.+....+|+|||||++||+||++|+++|++|+|+|++++++| 
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~~Gl~~a~~l~~~g~~~~~~e~~~~~gG~  131 (567)
T PLN02612         52 GRGPLQVVCVDYPRPELENTVNFLEAAALSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGK  131 (567)
T ss_pred             CCCCceEEecCCCCCchhhHHHHHhhhhhccccccCCCCCCCCCEEEECCCHHHHHHHHHHHhcCCeEEEEecCCCCCCc
Confidence            3458899999999999888888887666556666666666778999999999999999999999999999999887644 


Q ss_pred             ---------------------CChhHHHHHHHcCCCCccccccccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcC
Q 010539           95 ---------------------AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNN  153 (508)
Q Consensus        95 ---------------------~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (508)
                                           .++++.++++++|++..+.+......+.++...+.+..+.++...|.++..+..++...
T Consensus       132 ~~s~~~~~G~~~D~G~h~~~g~~~~~~~ll~elG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~P~~l~~~~~~l~~~  211 (567)
T PLN02612        132 VAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNN  211 (567)
T ss_pred             ceeeEcCCCCEEcCCceEEeCCCchHHHHHHHhCCcccceecccceEEEecCCCCceeeCcCchhcCChhhhhHHHHhcC
Confidence                                 35678899999999887777766666666655555555566555677777777877776


Q ss_pred             CCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHHcCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHh
Q 010539          154 EMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL  233 (508)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (508)
                      ..+++.++++......+............+..++.+|+++.+.+..+.+.++.++....++.+++++++...+..+..++
T Consensus       212 ~~ls~~~kl~~~~~~~~~~~~~~~~~~~~d~~Sv~e~l~~~~~~~~~~~~~~~~l~~~~~~~~p~~~S~~~~l~~l~~~l  291 (567)
T PLN02612        212 EMLTWPEKIKFAIGLLPAIVGGQAYVEAQDGLSVKEWMRKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFL  291 (567)
T ss_pred             ccCCHHHHHHHHHhhhHHhcccchhhhhcCcCcHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCHHHhhHHHHHHHHHHHH
Confidence            77788888877655443333333344456789999999999999999999999999899999999999999888777777


Q ss_pred             hhccCCeEEeecCCccccchHHHHHHHHHcCCEEEeCceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhc
Q 010539          234 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL  313 (508)
Q Consensus       234 ~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll  313 (508)
                      ....++.+.+..|+.+..+++.|.+.+++.|++|++|++|++|+.++++.+++|.+.+|+++.||+||+|+|+..+..|+
T Consensus       292 ~~~~gs~~~~~~G~~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~v~~~~G~~~~ad~VI~a~p~~~l~~Ll  371 (567)
T PLN02612        292 QEKHGSKMAFLDGNPPERLCMPIVDHFQSLGGEVRLNSRIKKIELNDDGTVKHFLLTNGSVVEGDVYVSATPVDILKLLL  371 (567)
T ss_pred             hccCCceEeeecCCchHHHHHHHHHHHHhcCCEEEeCCeeeEEEECCCCcEEEEEECCCcEEECCEEEECCCHHHHHHhC
Confidence            77778888888887668899999999999999999999999999866776767888888889999999999999999998


Q ss_pred             CcchhccHHHHHHhhcCCcCEEEEEEEecccccccccccccccCccceeecccccccccccCCCccEEEEEecCchhhcC
Q 010539          314 PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWIS  393 (508)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (508)
                      +....+.++.+.+.++.+.++.+++++|++++|...+.+++...+..+.+.+++...+.+.+++..++.+++.++.+|..
T Consensus       372 ~~~~~~~~~~~~l~~l~~~~v~~v~l~~dr~~~~~~~~~~~~~~~~~~~~~d~S~~~~~~~~~~~~ll~~~~~~a~~~~~  451 (567)
T PLN02612        372 PDQWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSTTCKEYYDPNKSMLELVFAPAEEWIS  451 (567)
T ss_pred             cchhcCcHHHHHHHhcCCCCeEEEEEEECcccCCCCCceeecCCCCceeehhhhhcchhhcCCCCeEEEEEEEcChhhhc
Confidence            87555556777888888889999999999998776666677666666667777666666777777777777777889999


Q ss_pred             CChHHHHHHHHHHHHHhCCCCcccccccceEEEeeEeecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHH
Q 010539          394 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASME  473 (508)
Q Consensus       394 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~  473 (508)
                      .+++++++.++++|.++||....+......+..+.+...|.+.|.+.++...+++.+++|++|||||||++...|.++|+
T Consensus       452 ~sdeei~e~vl~~L~~lfp~~~~~~~~~~~i~~~~~v~~P~a~~~~~pg~~~~rp~~~tPi~~l~lAGd~t~~~~~~sme  531 (567)
T PLN02612        452 RSDEDIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASME  531 (567)
T ss_pred             CCHHHHHHHHHHHHHHHCCcccccccCCceEEEEEEeccCCceEEeCCCCcccCccccCccCCEEEeecceeCCchhhHH
Confidence            99999999999999999997644433456678888999999999888887777888999999999999999999989999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccccCC
Q 010539          474 GAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM  506 (508)
Q Consensus       474 gA~~sg~~aA~~il~~l~~~~~~~~~~~~~~~~  506 (508)
                      ||+.||++||++|+++++....+...+.++++-
T Consensus       532 GAv~SG~~AA~~I~~~~~~~~~~~~~~~~~~~~  564 (567)
T PLN02612        532 GAVLSGKLCAQSIVQDYELLAARGPRKLSEATV  564 (567)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence            999999999999999998777777777766653

>TIGR02731 phytoene_desat phytoene desaturase Back     alignment and domain information
>PLN02487 zeta-carotene desaturase Back     alignment and domain information
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase Back     alignment and domain information
>PRK07233 hypothetical protein; Provisional Back     alignment and domain information
>PRK12416 protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase Back     alignment and domain information
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>PLN02576 protoporphyrinogen oxidase Back     alignment and domain information
>COG3349 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK11883 protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>COG1231 Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02268 probable polyamine oxidase Back     alignment and domain information
>PRK07208 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase Back     alignment and domain information
>PLN02676 polyamine oxidase Back     alignment and domain information
>PLN02529 lysine-specific histone demethylase 1 Back     alignment and domain information
>PLN02568 polyamine oxidase Back     alignment and domain information
>PLN02328 lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03000 amine oxidase Back     alignment and domain information
>PLN02976 amine oxidase Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>TIGR02734 crtI_fam phytoene desaturase Back     alignment and domain information
>TIGR02730 carot_isom carotene isomerase Back     alignment and domain information
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase Back     alignment and domain information
>COG2081 Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PTZ00363 rab-GDP dissociation inhibitor; Provisional Back     alignment and domain information
>PRK00711 D-amino acid dehydrogenase small subunit; Validated Back     alignment and domain information
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases Back     alignment and domain information
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form Back     alignment and domain information
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11259 solA N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>PLN02464 glycerol-3-phosphate dehydrogenase Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>KOG2853 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>COG0579 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>PRK11728 hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [] Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>PTZ00383 malate:quinone oxidoreductase; Provisional Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PLN02661 Putative thiazole synthesis Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>TIGR00136 gidA glucose-inhibited division protein A Back     alignment and domain information
>PRK07804 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK13339 malate:quinone oxidoreductase; Reviewed Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK05257 malate:quinone oxidoreductase; Validated Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PRK08401 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>TIGR02352 thiamin_ThiO glycine oxidase ThiO Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00551 nadB L-aspartate oxidase Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR00275 flavoprotein, HI0933 family Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>KOG2852 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PF13454 NAD_binding_9: FAD-NAD(P)-binding Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PRK09897 hypothetical protein; Provisional Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown] Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>COG3573 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>COG4716 Myosin-crossreactive antigen [Function unknown] Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>PLN02785 Protein HOTHEAD Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>KOG1439 consensus RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only] Back     alignment and domain information
>PTZ00188 adrenodoxin reductase; Provisional Back     alignment and domain information
>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PF07156 Prenylcys_lyase: Prenylcysteine lyase; InterPro: IPR010795 This entry represents a conserved region found in a group of prenylcysteine lyases (1 Back     alignment and domain information
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion] Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>KOG4405 consensus GDP dissociation inhibitor [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>KOG2755 consensus Oxidoreductase [General function prediction only] Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PRK06249 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK05708 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism] Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>PRK07417 arogenate dehydrogenase; Reviewed Back     alignment and domain information
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ Back     alignment and domain information
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>TIGR00507 aroE shikimate 5-dehydrogenase Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>PLN02695 GDP-D-mannose-3',5'-epimerase Back     alignment and domain information
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
4e0v_A497 Structure Of L-Amino Acid Oxidase From The B. Jarar 2e-04
3kve_A486 Structure Of Native L-Amino Acid Oxidase From Viper 6e-04
1f8r_A498 Crystal Structure Of L-Amino Acid Oxidase From Call 8e-04
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B. Jararacussu Venom Length = 497 Back     alignment and structure 
Iteration: 1

 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 55  SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAYPNIQN 101
           S P +VVI GAG++GLS A  LA+AGH+  +LEA +   G     +N
Sbjct: 44  SNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGQVKTYRN 90
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera Ammodytes Ammodytes: Stabilization Of The Quaternary Structure By Divalent Ions And Structural Changes In The Dynamic Active Site Length = 486 Back     alignment and structure
>pdb|1F8R|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From Calloselasma Rhodostoma Complexed With Citrate Length = 498 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 8e-53
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 5e-35
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 5e-33
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 1e-30
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 4e-29
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 4e-29
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 5e-29
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 4e-28
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 2e-27
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 5e-27
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 3e-25
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 1e-24
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 1e-23
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 6e-23
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 2e-21
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 6e-19
3utf_A513 UDP-galactopyranose mutase; nucleotide binding, fl 2e-17
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 1e-11
2z3y_A 662 Lysine-specific histone demethylase 1; chromatin, 3e-07
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 5e-11
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 6e-11
2xag_A 852 Lysine-specific histone demethylase 1; amine oxida 2e-07
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 3e-10
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 5e-10
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 2e-09
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 6e-09
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 1e-08
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 2e-08
3i3l_A 591 Alkylhalidase CMLS; flavin-dependent halogenase, c 3e-08
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 9e-08
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 2e-07
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 5e-07
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 1e-06
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 1e-06
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 2e-06
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 3e-06
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 3e-06
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 2e-05
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 6e-06
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 9e-06
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 1e-05
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 2e-05
3atr_A453 Conserved archaeal protein; saturating double bond 2e-05
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 2e-05
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 2e-05
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 5e-04
3fmw_A570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 2e-05
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 2e-05
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 3e-05
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 3e-05
3ayj_A 721 Pro-enzyme of L-phenylalanine oxidase; amino acid 4e-05
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 4e-05
3ihg_A535 RDME; flavoenzyme, anthracycline, polyketide biosy 5e-05
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 5e-05
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 6e-05
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 8e-05
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 1e-04
2r0c_A549 REBC; flavin adenine dinucleotide, monooxygenase, 1e-04
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 1e-04
3pl8_A 623 Pyranose 2-oxidase; substrate complex, H167A mutan 1e-04
2qa1_A500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 1e-04
2e1m_C181 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 2e-04
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 2e-04
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 2e-04
2qa2_A499 CABE, polyketide oxygenase CABE; FAD, angucycline, 2e-04
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 2e-04
4fk1_A304 Putative thioredoxin reductase; structural genomic 3e-04
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 3e-04
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 4e-04
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 4e-04
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 5e-04
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 6e-04
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 7e-04
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 8e-04
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 9e-04
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Length = 421 Back     alignment and structure
 Score =  183 bits (466), Expect = 8e-53
 Identities = 58/453 (12%), Positives = 142/453 (31%), Gaps = 74/453 (16%)

Query: 58  LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD---------------------VLVGAY 96
           ++ V+ GAGL GL    +LA  GH+ ++LE                         ++   
Sbjct: 1   MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHG 60

Query: 97  PN--IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNE 154
            +  + +L   LG    +             K      F + E                +
Sbjct: 61  EDGPLAHLLRILGAKVEIVNSNPKGKILWEGK-----IFHYRESW--------------K 101

Query: 155 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 214
            L+  EK K    LL  I   +     ++ +   EW++++   +     V  + +   + 
Sbjct: 102 FLSVKEKAKAL-KLLAEIRMNKLP---KEEIPADEWIKEKIGENEFLLSVLESFAGWADS 157

Query: 215 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 274
           ++  +L+   +   +   L          + G   + +   +   I    G++     V 
Sbjct: 158 VSLSDLTALELAKEIRAAL---RWGGPGLIRGG-CKAVIDELERIIMENKGKILTRKEVV 213

Query: 275 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 334
           +I + ++  V      +      D  +    V      +  ++ +  Y K+++ +     
Sbjct: 214 EINI-EEKKVY---TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEG 269

Query: 335 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 394
           I  ++    + +     ++F+   +++ + + S   K       +++    A     +  
Sbjct: 270 IKFNLAVPGEPRIGN-TIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALKNGNV-- 326

Query: 395 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIP-NCEPCRPLQRSP 453
              + I+   +EL ++FP+                    +      P N          P
Sbjct: 327 --KKAIEKGWEELLEIFPEGE--------------PLLAQVYRDGNPVNRTRAGLHIEWP 370

Query: 454 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 486
           +    + GD  +      ++G  L      + +
Sbjct: 371 LNEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Length = 453 Back     alignment and structure
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Length = 425 Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Length = 498 Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Length = 495 Back     alignment and structure
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Length = 520 Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Length = 424 Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Length = 489 Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Length = 470 Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Length = 475 Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Length = 431 Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Length = 478 Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Length = 472 Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Length = 504 Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Length = 484 Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Length = 477 Back     alignment and structure
>3utf_A UDP-galactopyranose mutase; nucleotide binding, flavin adenine dinucleotide BIND isomerase; HET: FDA; 2.25A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Length = 513 Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662 Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662 Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Length = 379 Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Length = 407 Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 376 Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Length = 516 Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Length = 421 Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Length = 410 Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Length = 475 Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Length = 397 Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Length = 512 Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Length = 397 Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Length = 398 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Length = 729 Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Length = 690 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Length = 433 Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Length = 671 Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Length = 384 Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Length = 367 Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Length = 430 Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Length = 382 Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453 Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Length = 342 Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Length = 342 Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Length = 570 Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Length = 389 Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Length = 344 Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} SCOP: c.3.1.6 PDB: 3fpz_A* Length = 326 Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Length = 721 Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Length = 369 Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Length = 535 Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Length = 372 Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Length = 357 Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Length = 397 Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Length = 284 Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Length = 549 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Length = 571 Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Length = 500 Back     alignment and structure
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 181 Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Length = 572 Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Length = 351 Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Length = 499 Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Length = 566 Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Length = 304 Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Length = 448 Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Length = 382 Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Length = 510 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Length = 297 Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Length = 399 Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Length = 438 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 100.0
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 100.0
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 100.0
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 100.0
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 100.0
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 100.0
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 100.0
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 100.0
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 100.0
4dgk_A501 Phytoene dehydrogenase; the FAD/NAD(P)-binding ros 100.0
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 100.0
4gde_A513 UDP-galactopyranose mutase; flavin adenine dinucle 99.97
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 99.97
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 99.97
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 99.97
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 99.97
4gut_A776 Lysine-specific histone demethylase 1B; histone de 99.96
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 99.96
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 99.96
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 99.96
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 99.95
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 99.94
3ayj_A721 Pro-enzyme of L-phenylalanine oxidase; amino acid 99.93
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.92
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 99.91
2bcg_G453 Secretory pathway GDP dissociation inhibitor; RABG 99.85
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 99.83
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 99.8
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 99.8
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 99.79
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 99.79
2gag_B405 Heterotetrameric sarcosine oxidase beta-subunit; f 99.72
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 99.72
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 99.71
3nlc_A549 Uncharacterized protein VP0956; FAD-binding protei 99.69
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 99.68
3dme_A369 Conserved exported protein; structural genomics, P 99.68
3ps9_A676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.65
3pvc_A689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.64
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 99.63
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 99.63
3nyc_A381 D-arginine dehydrogenase; FAD, imino-arginine, oxi 99.63
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 99.63
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 99.62
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.61
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 99.6
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 99.58
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 99.58
1vg0_A650 RAB proteins geranylgeranyltransferase component A 99.57
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 99.56
3i3l_A 591 Alkylhalidase CMLS; flavin-dependent halogenase, c 99.55
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 99.54
3fmw_A 570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 99.53
3da1_A 561 Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 99.53
3ihg_A 535 RDME; flavoenzyme, anthracycline, polyketide biosy 99.52
2qa2_A499 CABE, polyketide oxygenase CABE; FAD, angucycline, 99.48
2rgh_A 571 Alpha-glycerophosphate oxidase; flavoprotein oxida 99.48
2qa1_A500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 99.48
2i0z_A447 NAD(FAD)-utilizing dehydrogenases; structural geno 99.48
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.47
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 99.46
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 99.46
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 99.45
3v76_A417 Flavoprotein; structural genomics, PSI-biology, NE 99.44
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 99.43
3atr_A453 Conserved archaeal protein; saturating double bond 99.4
2dkh_A 639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 99.39
3e1t_A 512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 99.38
2qcu_A501 Aerobic glycerol-3-phosphate dehydrogenase; glycer 99.38
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 99.38
2gmh_A 584 Electron transfer flavoprotein-ubiquinone oxidored 99.38
1pj5_A 830 N,N-dimethylglycine oxidase; channelling, FAD bind 99.34
4hb9_A412 Similarities with probable monooxygenase; flavin, 99.34
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 99.34
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 99.34
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 99.31
2wdq_A 588 Succinate dehydrogenase flavoprotein subunit; succ 99.31
2r0c_A549 REBC; flavin adenine dinucleotide, monooxygenase, 99.28
2gqf_A401 Hypothetical protein HI0933; structural genomics, 99.28
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 99.28
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 99.28
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 99.27
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 99.25
2weu_A511 Tryptophan 5-halogenase; regioselectivity, antifun 99.25
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 99.23
3c4n_A405 Uncharacterized protein DR_0571; alpha-beta protei 99.22
2h88_A 621 Succinate dehydrogenase flavoprotein subunit; comp 99.21
2e4g_A550 Tryptophan halogenase; flavin-binding, rebeccamyci 99.21
4ap3_A 549 Steroid monooxygenase; oxidoreductase, baeyer-vill 99.21
4fk1_A304 Putative thioredoxin reductase; structural genomic 99.21
1pn0_A 665 Phenol 2-monooxygenase; two dimers, TLS refinement 99.21
2cul_A232 Glucose-inhibited division protein A-related PROT 99.2
2aqj_A 538 Tryptophan halogenase, pRNA; flavin-dependent halo 99.2
1chu_A 540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 99.19
3gwf_A 540 Cyclohexanone monooxygenase; flavoprotein biocatal 99.18
2bs2_A 660 Quinol-fumarate reductase flavoprotein subunit A; 99.18
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 99.17
3uox_A 545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 99.16
2bry_A497 NEDD9 interacting protein with calponin homology a 99.16
2ywl_A180 Thioredoxin reductase related protein; uncharacter 99.16
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 99.16
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 99.16
2pyx_A526 Tryptophan halogenase; structural genomics, JOI fo 99.15
3ces_A 651 MNMG, tRNA uridine 5-carboxymethylaminomethyl modi 99.15
2zxi_A 637 TRNA uridine 5-carboxymethylaminomethyl modificat 99.14
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 99.14
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 99.13
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 99.13
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 99.12
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 99.11
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 99.1
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 99.09
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 99.09
2e1m_C181 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.07
1kf6_A 602 Fumarate reductase flavoprotein; respiration, fuma 99.07
4dna_A463 Probable glutathione reductase; structural genomic 99.07
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 99.04
1jnr_A 643 Adenylylsulfate reductase; oxidoreductase; HET: FA 99.04
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 99.04
3cp8_A 641 TRNA uridine 5-carboxymethylaminomethyl modificati 99.03
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 99.03
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 99.02
2e5v_A472 L-aspartate oxidase; archaea, oxidoreductase; HET: 99.02
3gyx_A 662 Adenylylsulfate reductase; oxidoreductase; HET: FA 99.01
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 99.01
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 99.01
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 98.98
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 98.98
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 98.96
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 98.95
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 98.95
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 98.95
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 98.94
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 98.94
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 98.93
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 98.92
3r9u_A315 Thioredoxin reductase; structural genomics, center 98.9
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 98.9
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 98.9
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 98.89
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 98.88
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 98.88
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 98.87
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 98.87
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 98.87
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 98.87
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 98.87
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 98.85
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 98.84
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 98.83
1q1r_A 431 Putidaredoxin reductase; glutathione reductase fol 98.83
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 98.83
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 98.83
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 98.82
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 98.82
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 98.82
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 98.82
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 98.81
4b63_A501 L-ornithine N5 monooxygenase; oxidoreductase, side 98.8
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 98.79
1ojt_A482 Surface protein; redox-active center, glycolysis, 98.77
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 98.76
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 98.76
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 98.76
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 98.76
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 98.75
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 98.75
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 98.75
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 98.75
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 98.74
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 98.74
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 98.74
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 98.74
3ntd_A 565 FAD-dependent pyridine nucleotide-disulphide oxido 98.73
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 98.73
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 98.71
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 98.71
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 98.71
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 98.7
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 98.7
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 98.69
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 98.69
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 98.69
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 98.68
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 98.68
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 98.68
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 98.67
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 98.67
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 98.66
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 98.65
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 98.64
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 98.63
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 98.63
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 98.63
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 98.63
1fec_A490 Trypanothione reductase; redox-active center, oxid 98.63
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 98.62
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 98.62
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 98.61
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 98.61
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 98.59
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 98.59
3qvp_A 583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 98.59
3pl8_A 623 Pyranose 2-oxidase; substrate complex, H167A mutan 98.58
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 98.56
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 98.55
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 98.54
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 98.54
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 98.53
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 98.52
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 98.51
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 98.51
3fpz_A326 Thiazole biosynthetic enzyme; FAD, mitochondrion, 98.51
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 98.51
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 98.5
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 98.5
1fec_A490 Trypanothione reductase; redox-active center, oxid 98.5
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 98.49
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 98.49
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 98.47
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 98.46
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 98.45
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 98.45
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 98.41
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 98.41
1ojt_A482 Surface protein; redox-active center, glycolysis, 98.41
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 98.4
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 98.4
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 98.39
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 98.39
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 98.38
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 98.35
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 98.34
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 98.33
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 98.33
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 98.31
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 98.3
3ics_A 588 Coenzyme A-disulfide reductase; pyridine nucleotid 98.29
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 98.29
3fim_B 566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 98.27
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 98.26
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 98.25
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 98.25
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 98.22
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 98.19
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 98.19
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 98.18
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 98.17
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 98.16
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 98.14
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 98.14
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 98.1
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 98.09
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 98.09
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 98.09
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 98.07
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 98.07
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 98.06
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 98.05
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 98.03
3g5s_A443 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methy 98.02
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 97.98
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 97.96
3r9u_A315 Thioredoxin reductase; structural genomics, center 97.95
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 97.93
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 97.92
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 97.9
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 97.88
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 97.85
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 97.85
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 97.83
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 97.82
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 97.82
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 97.81
3t37_A526 Probable dehydrogenase; BET alpha beta fold, ADP b 97.79
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 97.75
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 97.72
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 97.7
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 97.69
3q9t_A 577 Choline dehydrogenase and related flavoproteins; g 97.68
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 97.66
2e1m_B130 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 97.62
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 97.6
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 97.58
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 97.56
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 97.51
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 97.46
1gpe_A 587 Protein (glucose oxidase); oxidoreductase(flavopro 97.36
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 97.3
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 97.15
4fk1_A304 Putative thioredoxin reductase; structural genomic 96.99
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 96.96
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 96.87
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 96.84
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 96.81
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 96.8
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 96.77
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 96.69
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 96.61
1lss_A140 TRK system potassium uptake protein TRKA homolog; 96.44
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 96.36
4b63_A501 L-ornithine N5 monooxygenase; oxidoreductase, side 96.3
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 96.16
1id1_A153 Putative potassium channel protein; RCK domain, E. 96.09
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 95.94
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 95.87
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 95.82
3c85_A183 Putative glutathione-regulated potassium-efflux S 95.8
3k6j_A460 Protein F01G10.3, confirmed by transcript evidenc; 95.54
3lk7_A451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 95.53
2x5o_A439 UDP-N-acetylmuramoylalanine--D-glutamate ligase; A 95.48
3eag_A326 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME 95.37
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 95.33
3e8x_A236 Putative NAD-dependent epimerase/dehydratase; stru 95.28
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 95.27
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 95.27
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 95.22
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 95.18
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 95.11
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 95.02
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 94.96
1kyq_A274 Met8P, siroheme biosynthesis protein Met8; homodim 94.83
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 94.8
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 94.8
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 94.76
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 94.75
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 94.66
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 94.64
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 94.63
2y0c_A478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 94.58
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 94.53
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 94.52
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 94.45
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 94.45
3vtf_A444 UDP-glucose 6-dehydrogenase; two discrete alpha/be 94.44
1zcj_A463 Peroxisomal bifunctional enzyme; peroxisomal multi 94.43
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 94.42
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 94.37
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 94.34
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 94.28
3g79_A478 NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; 94.26
4dna_A463 Probable glutathione reductase; structural genomic 94.24
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 94.19
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 94.19
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 94.15
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 94.12
3gg2_A450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 94.1
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 94.03
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 94.01
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 94.0
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 94.0
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 93.99
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 93.99
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 93.91
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 93.9
4a7p_A446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 93.88
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 93.85
3tl2_A315 Malate dehydrogenase; center for structural genomi 93.84
3mog_A483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 93.79
3pid_A432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 93.73
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 93.7
4g65_A461 TRK system potassium uptake protein TRKA; structur 93.63
3l6d_A306 Putative oxidoreductase; structural genomics, prot 93.59
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 93.55
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 93.54
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 93.53
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 93.5
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 93.43
1mv8_A436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 93.36
3ldh_A330 Lactate dehydrogenase; oxidoreductase, CHOH donor, 93.34
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 93.34
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 93.32
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 93.32
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 93.27
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 93.21
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 93.18
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 93.17
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 93.14
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 93.14
3qha_A296 Putative oxidoreductase; seattle structural genomi 93.14
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 93.13
2wtb_A725 MFP2, fatty acid multifunctional protein (ATMFP2); 93.09
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 93.08
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 93.06
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 93.05
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 93.03
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 93.02
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 93.02
2o3j_A481 UDP-glucose 6-dehydrogenase; structural genomics, 92.98
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 92.96
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 92.94
3dfu_A232 Uncharacterized protein from 6-phosphogluconate de 92.87
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 92.84
3gpi_A286 NAD-dependent epimerase/dehydratase; structural ge 92.84
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 92.77
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 92.77
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 92.77
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 92.75
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 92.74
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 92.67
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 92.64
4ezb_A317 Uncharacterized conserved protein; structural geno 92.62
1dlj_A402 UDP-glucose dehydrogenase; rossmann fold, ternary 92.62
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 92.62
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 92.61
3ius_A286 Uncharacterized conserved protein; APC63810, silic 92.47
3c24_A286 Putative oxidoreductase; YP_511008.1, structural g 92.42
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 92.39
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 92.37
3zwc_A742 Peroxisomal bifunctional enzyme; beta oxidation pa 92.33
4gwg_A484 6-phosphogluconate dehydrogenase, decarboxylating; 92.29
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 92.22
1wdk_A715 Fatty oxidation complex alpha subunit; alpha2BETA2 92.19
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 92.17
3ktd_A341 Prephenate dehydrogenase; structural genomics, joi 92.16
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 92.14
3ew7_A221 LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend 92.06
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 92.04
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 92.03
1yqg_A263 Pyrroline-5-carboxylate reductase; structural geno 92.02
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 91.99
2zyd_A480 6-phosphogluconate dehydrogenase, decarboxylating; 91.78
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 91.76
2q3e_A467 UDP-glucose 6-dehydrogenase; hexamer, structural g 91.75
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 91.7
3fi9_A343 Malate dehydrogenase; structural genomics, oxidore 91.69
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 91.65
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 91.59
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 91.58
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 91.55
2qrj_A394 Saccharopine dehydrogenase, NAD+, L-lysine- formin 91.52
2izz_A322 Pyrroline-5-carboxylate reductase 1; amino-acid bi 91.5
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 91.49
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 91.43
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 91.42
3cky_A301 2-hydroxymethyl glutarate dehydrogenase; rossmann 91.42
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 91.41
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 91.4
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 91.36
2p4q_A497 6-phosphogluconate dehydrogenase, decarboxylating; 91.34
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 91.29
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 91.29
4id9_A347 Short-chain dehydrogenase/reductase; putative dehy 91.28
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 91.24
1vpd_A299 Tartronate semialdehyde reductase; structural geno 91.21
2rir_A300 Dipicolinate synthase, A chain; structural genomic 91.16
2pzm_A330 Putative nucleotide sugar epimerase/ dehydratase; 91.16
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 91.09
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 91.09
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 91.05
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 91.01
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 91.0
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 90.95
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 90.94
2pgd_A482 6-phosphogluconate dehydrogenase; oxidoreductase ( 90.93
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 90.92
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 90.78
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 90.74
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 90.69
2ahr_A259 Putative pyrroline carboxylate reductase; pyrrolin 90.68
4hv4_A494 UDP-N-acetylmuramate--L-alanine ligase; MURC, yers 90.63
3ojo_A431 CAP5O; rossmann fold, complex with cofactor NAD an 90.62
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 90.59
1y1p_A342 ARII, aldehyde reductase II; rossmann fold, short 90.56
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 90.51
1pgj_A478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 90.48
2x0j_A294 Malate dehydrogenase; oxidoreductase, hyperthermop 90.47
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 90.46
4b4o_A298 Epimerase family protein SDR39U1; isomerase; HET: 90.43
3c7a_A404 Octopine dehydrogenase; L) stereospecific opine de 90.43
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 90.42
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 90.4
3dhn_A227 NAD-dependent epimerase/dehydratase; reductase, PF 90.39
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 90.39
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 90.34
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 90.27
2d4a_B308 Malate dehydrogenase; archaea, hyperthermophIle, o 90.27
1yb4_A295 Tartronic semialdehyde reductase; structural genom 90.16
1np3_A338 Ketol-acid reductoisomerase; A DEEP figure-OF-eigh 90.13
2iz1_A474 6-phosphogluconate dehydrogenase, decarboxylating; 90.08
1i36_A264 Conserved hypothetical protein MTH1747; NADP bindi 90.07
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 89.97
1leh_A364 Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi 89.95
3t4e_A312 Quinate/shikimate dehydrogenase; structural genomi 89.9
3obb_A300 Probable 3-hydroxyisobutyrate dehydrogenase; struc 89.88
3i6i_A346 Putative leucoanthocyanidin reductase 1; rossmann 89.87
1mld_A314 Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D 89.83
3vps_A321 TUNA, NAD-dependent epimerase/dehydratase; tunicam 89.82
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 89.75
3rkr_A262 Short chain oxidoreductase; rossmann fold; HET: NA 89.73
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 89.7
3r6d_A221 NAD-dependent epimerase/dehydratase; structural ge 89.35
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 89.24
3qvo_A236 NMRA family protein; structural genomics, PSI-biol 89.24
3b1f_A290 Putative prephenate dehydrogenase; enzyme, 4-hydro 89.22
3q2o_A389 Phosphoribosylaminoimidazole carboxylase, ATPase; 89.15
1npy_A271 Hypothetical shikimate 5-dehydrogenase-like protei 89.12
2dkn_A255 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta 89.07
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 89.07
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 89.04
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Back     alignment and structure
Probab=100.00  E-value=2.8e-35  Score=292.41  Aligned_cols=396  Identities=18%  Similarity=0.259  Sum_probs=269.0

Q ss_pred             CeEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCCC-----------------------hhHHHHHHHcCCCCcccc
Q 010539           58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGAY-----------------------PNIQNLFGELGINDRLQW  114 (508)
Q Consensus        58 ~dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~~-----------------------~~~~~l~~~lg~~~~~~~  114 (508)
                      +||||||||++||+||++|+++|++|+|||+++.++|..                       ..+.++++++|+...+..
T Consensus         1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~   80 (425)
T 3ka7_A            1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR   80 (425)
T ss_dssp             CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred             CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence            589999999999999999999999999999998875432                       245788889987654333


Q ss_pred             cccccee-ecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhHhcCcchhhcccCccHHHHHHH
Q 010539          115 KEHSMIF-AMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK  193 (508)
Q Consensus       115 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  193 (508)
                      ......+ ........+.   ... ....+..      ....+...++.+..........      ...+..++.+|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~~l~~  144 (425)
T 3ka7_A           81 SEMTTVRVPLKKGNPDYV---KGF-KDISFND------FPSLLSYKDRMKIALLIVSTRK------NRPSGSSLQAWIKS  144 (425)
T ss_dssp             CCCCEEEEESSTTCCSST---TCE-EEEEGGG------GGGGSCHHHHHHHHHHHHHTTT------SCCCSSBHHHHHHH
T ss_pred             cCCceEEeecCCCccccc---ccc-cceehhh------hhhhCCHHHHHHHHHHHHhhhh------cCCCCCCHHHHHHH
Confidence            2211111 1111000000   000 0000000      0112233333333222111000      12246799999998


Q ss_pred             cCCChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHHhhhccCCeEEeecCCccccchHHHHHHHHHcCCEEEeCcee
Q 010539          194 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV  273 (508)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~~~~V  273 (508)
                      . +.....+.++.++....+..++++++.......+.....  .+. ..++.+| +..+++.|.+.++++|++|+++++|
T Consensus       145 ~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V  219 (425)
T 3ka7_A          145 Q-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQEV  219 (425)
T ss_dssp             H-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred             h-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCce
Confidence            7 556667777888887778889999998766655554321  222 3456665 7889999999999999999999999


Q ss_pred             eEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhcCcch-h--ccHHHHHHhhcCCcCEEEEEEEeccccccccc
Q 010539          274 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD  350 (508)
Q Consensus       274 ~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  350 (508)
                      ++|.. +++.+++|++. |+++.||.||+|+|++.+.+|+++.. .  +..+.+++.++.+.+..+++++++++++.. .
T Consensus       220 ~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~  296 (425)
T 3ka7_A          220 SKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH-T  296 (425)
T ss_dssp             EEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS-S
T ss_pred             eEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc-C
Confidence            99998 45666678775 76899999999999999999987432 1  446678888898888899999999987543 3


Q ss_pred             ccccccCc-cceeecccccccccccCCCccEEEEEecCchhhcCCChHHHHHHHHHHHHHhCCCCcccccccceEEEeeE
Q 010539          351 HLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHV  429 (508)
Q Consensus       351 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  429 (508)
                      ++++..+. ....+...+..++.++|+|.+++.+......+..+. .++.++.++++|.+++|.. ..       ....+
T Consensus       297 ~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~-~~-------~~~~v  367 (425)
T 3ka7_A          297 GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGK-RY-------EVLLI  367 (425)
T ss_dssp             SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTC-CE-------EEEEE
T ss_pred             EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCC-ce-------EEEEE
Confidence            33443322 122234556678889999998887654332222222 2455799999999999872 21       22355


Q ss_pred             eecCCceeccCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 010539          430 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV  487 (508)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~sg~~aA~~il  487 (508)
                      .+|+.+.+.+.++.. .++..++|++|||+||+++.+.+..+|++|+.||++||++|+
T Consensus       368 ~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~  424 (425)
T 3ka7_A          368 QSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL  424 (425)
T ss_dssp             EEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred             EEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence            678888888877743 446678899999999999999766899999999999999986
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Back     alignment and structure
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Back     alignment and structure
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Back     alignment and structure
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Back     alignment and structure
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A* Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Back     alignment and structure
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Back     alignment and structure
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Back     alignment and structure
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A* Back     alignment and structure
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Back     alignment and structure
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R* Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Back     alignment and structure
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Back     alignment and structure
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Back     alignment and structure
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* Back     alignment and structure
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A* Back     alignment and structure
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Back     alignment and structure
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1} Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Back     alignment and structure
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* Back     alignment and structure
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7 Back     alignment and structure
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} Back     alignment and structure
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A Back     alignment and structure
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Back     alignment and structure
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum} Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae} Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Back     alignment and structure
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* Back     alignment and structure
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Back     alignment and structure
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Back     alignment and structure
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Back     alignment and structure
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* Back     alignment and structure
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Back     alignment and structure
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Back     alignment and structure
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Back     alignment and structure
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 508
d2dw4a2449 c.3.1.2 (A:274-654,A:764-831) Lysine-specific hist 3e-36
d2v5za1383 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {H 7e-20
d1seza1373 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen ox 3e-19
d2iida1370 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M 7e-19
d2ivda1347 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen ox 3e-17
d2bcgg1297 c.3.1.3 (G:5-301) Guanine nucleotide dissociation 6e-15
d2voua1265 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr 3e-09
d1w4xa1298 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxy 1e-08
d1dxla1221 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehyd 2e-08
d1d5ta1336 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide di 3e-08
d2bi7a1314 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mu 3e-08
d1b5qa1347 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai 4e-08
d1b5qa1347 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai 2e-04
d3c96a1288 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps 7e-08
d1k0ia1292 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydr 1e-07
d2gf3a1281 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bac 2e-07
d1ryia1276 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO { 4e-07
d2i0za1251 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {B 5e-07
d1n4wa1367 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of 5e-07
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 7e-07
d1c0pa1268 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida 7e-07
d1i8ta1298 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mu 8e-07
d1lqta2239 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reduct 1e-06
d1v59a1233 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehyd 1e-06
d3coxa1370 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of 1e-06
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 2e-06
d1pn0a1360 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {So 2e-06
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 2e-06
d1kifa1246 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N 2e-06
d2gqfa1253 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein H 6e-06
d1gtea4196 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine de 1e-05
d2gjca1311 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Th 1e-05
d1ojta1229 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide deh 2e-05
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 2e-05
d1pj5a2305 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine ox 3e-05
d2f5va1379 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W 5e-05
d1rp0a1278 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi 6e-05
d1trba1190 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase 7e-05
d1vdca1192 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase 8e-05
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 9e-05
d2gv8a1335 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox 1e-04
d1cf3a1385 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper 1e-04
d1ebda1223 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehyd 2e-04
d1cjca2230 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase 2e-04
d1gesa1217 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase 3e-04
d1fl2a1184 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide 4e-04
d2gmha1380 c.3.1.2 (A:4-236,A:336-482) Electron transfer flav 5e-04
d1gesa2116 c.3.1.5 (A:147-262) Glutathione reductase {Escheri 8e-04
d1kdga1360 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain 0.001
d3lada1229 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehyd 0.001
d1d7ya1183 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredo 0.002
d3grsa1221 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase 0.002
d2jfga193 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D- 0.002
d1onfa1259 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase 0.002
d1chua2305 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {E 0.002
d1gpea1391 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic 0.002
d2cula1230 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {T 0.003
d1djqa3233 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehyd 0.003
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 449 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 3e-36
 Identities = 61/465 (13%), Positives = 130/465 (27%), Gaps = 51/465 (10%)

Query: 56  KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL---------------VGA----- 95
           K  KV+I G+G++GL+ A+ L   G    LLEARD +               +GA     
Sbjct: 4   KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTG 63

Query: 96  --YPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNN 153
                +  +  ++     ++  +      +    G+    +  E++    N +L      
Sbjct: 64  LGGNPMAVVSKQVN----MELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYL 119

Query: 154 EMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALN 213
                   +                V     L V   ++++ V D         +     
Sbjct: 120 SHQLDFNVLN------------NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEE 167

Query: 214 FINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 273
                   +           Q K  S++        E L       + +L  E       
Sbjct: 168 LKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEY-DELAE 226

Query: 274 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVP 333
            + +L +          +   +                            K  ++     
Sbjct: 227 TQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFE 286

Query: 334 VINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA-PAEEWI 392
               H+         Y  +  + +  L +  + ++    Y      ++ +     ++ +I
Sbjct: 287 FTGSHLTVRNG----YSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFI 342

Query: 393 SCSDSEIIDATMKELAKLFPDEISADQSK-------AKIVKYHVVKTPRSVYKTIPNCEP 445
              D+ +    +  L +  P                 ++V          +        P
Sbjct: 343 YKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMVAAGSSGNDYDLMAQPITPGP 402

Query: 446 CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 490
             P    P+   + AG++T + Y A++ GA+LSG   A  I   +
Sbjct: 403 SIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 447
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 373 Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370 Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Length = 347 Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 297 Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Length = 298 Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 221 Back     information, alignment and structure
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]} Length = 336 Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Length = 314 Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347 Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347 Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Length = 292 Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Length = 281 Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 276 Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Length = 251 Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 239 Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 233 Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Length = 360 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 246 Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Length = 253 Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Length = 196 Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 311 Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Length = 229 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Length = 305 Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Length = 278 Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Length = 190 Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 192 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335 Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 223 Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Length = 217 Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Length = 184 Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Length = 380 Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Length = 116 Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Length = 229 Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Length = 183 Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Length = 93 Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Length = 259 Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 305 Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Length = 230 Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Length = 233 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.88
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.83
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 99.81
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 99.75
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 99.72
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 99.71
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 99.7
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 99.67
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 99.67
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 99.66
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 99.65
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 99.64
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 99.58
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 99.57
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 99.51
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 99.51
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 99.47
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 99.45
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 99.44
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 99.43
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 99.37
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 99.36
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 99.34
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 99.32
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 99.32
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 99.3
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 99.29
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 99.27
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 99.26
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 99.26
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 99.24
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 99.24
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 99.23
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 99.22
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 99.19
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 99.19
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 99.18
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 99.17
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 99.17
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 99.17
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 99.14
d1neka2330 Succinate dehydogenase {Escherichia coli [TaxId: 5 99.13
d2cula1230 GidA-related protein TTHA1897 {Thermus thermophilu 99.12
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 99.1
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 99.06
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 99.06
d1mo9a1261 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 99.05
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 99.01
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 99.0
d1vg0a1491 Rab escort protein 1 {Rat (Rattus norvegicus) [Tax 98.99
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 98.98
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 98.96
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 98.93
d1rp0a1278 Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara 98.9
d1onfa1259 Glutathione reductase {Plasmodium falciparum [TaxI 98.89
d1gesa1217 Glutathione reductase {Escherichia coli [TaxId: 56 98.86
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 98.83
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 98.81
d1vdca1192 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 98.79
d1jnra2356 Adenylylsulfate reductase A subunit {Archaeon Arch 98.77
d1nhpa1198 NADH peroxidase {Enterococcus faecalis [TaxId: 135 98.76
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 98.7
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 98.68
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 98.67
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 98.66
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 98.65
d1ojta1229 Dihydrolipoamide dehydrogenase {Neisseria meningit 98.64
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 98.62
d3lada1229 Dihydrolipoamide dehydrogenase {Azotobacter vinela 98.62
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 98.61
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 98.61
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 98.56
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 98.54
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 98.48
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 98.48
d1djqa2156 Trimethylamine dehydrogenase, C-terminal domain {M 98.44
d1h6va1235 Mammalian thioredoxin reductase {Rat (Rattus norve 98.44
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 98.4
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 98.39
d1ebda1223 Dihydrolipoamide dehydrogenase {Bacillus stearothe 98.37
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 98.33
d3grsa1221 Glutathione reductase {Human (Homo sapiens) [TaxId 98.33
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 98.32
d1lvla1220 Dihydrolipoamide dehydrogenase {Pseudomonas putida 98.29
d2ivda2108 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 98.26
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 98.25
d1aoga1238 Trypanothione reductase {Trypanosoma cruzi [TaxId: 98.13
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 98.12
d1kifa1246 D-aminoacid oxidase, N-terminal domain {Pig (Sus s 98.1
d1feca1240 Trypanothione reductase {Crithidia fasciculata [Ta 98.09
d1gtea3153 Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su 98.05
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 98.04
d1seza2112 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 97.98
d1trba2126 Thioredoxin reductase {Escherichia coli [TaxId: 56 97.86
d1fl2a2126 Alkyl hydroperoxide reductase subunit F (AhpF), C- 97.83
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 97.75
d2v5za2112 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 97.7
d1xdia1233 Dihydrolipoamide dehydrogenase {Mycobacterium tube 97.68
d2iida2113 L-aminoacid oxidase {Malayan pit viper (Calloselas 97.47
d2dw4a3109 Lysine-specific histone demethylase 1, LSD1 {Human 97.45
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 97.37
d1b5qa2112 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 97.3
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 97.28
d1vdca2130 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 97.21
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 96.99
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 96.95
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 96.89
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 96.87
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 96.78
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 96.73
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 96.63
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 96.39
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 96.32
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 96.16
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 96.06
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 96.03
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 96.02
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 95.84
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 95.69
d2gv8a2107 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 95.65
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 95.64
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 95.63
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 95.57
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 95.52
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 95.4
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 95.25
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 95.14
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 95.13
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 95.09
d1uxja1142 Malate dehydrogenase {Chloroflexus aurantiacus [Ta 95.09
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 95.06
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 95.02
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 94.94
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 94.94
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 94.93
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 94.92
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 94.91
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 94.78
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 94.75
d1dlja2196 UDP-glucose dehydrogenase (UDPGDH) {Streptococcus 94.65
d1hyea1145 MJ0490, lactate/malate dehydrogenase {Archaeon Met 94.6
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 94.54
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 94.52
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 94.42
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 94.4
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 94.4
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 94.28
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 94.09
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 94.02
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 93.87
d1p3da196 UDP-N-acetylmuramate-alanine ligase MurC {Haemophi 93.8
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 93.74
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 93.72
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 93.61
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 93.54
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 93.52
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 93.49
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 93.38
d1id1a_153 Rck domain from putative potassium channel Kch {Es 93.26
d1w4xa2235 Phenylacetone monooxygenase {Thermobifida fusca [T 93.25
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 93.16
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 92.69
d1o6za1142 Malate dehydrogenase {Archaeon Haloarcula marismor 92.64
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 92.49
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 92.41
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 92.35
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 92.05
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 91.96
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 91.79
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 91.76
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 91.69
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 91.63
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 91.61
d1nvta1177 Shikimate 5-dehydrogenase AroE {Archaeon Methanoco 91.48
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 91.46
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 91.4
d1vl0a_281 DTDP-4-dehydrorhamnose reductase RfbD {Clostridium 91.0
d2cmda1145 Malate dehydrogenase {Escherichia coli [TaxId: 562 90.73
d1lqta1216 Ferredoxin:NADP reductase FprA {Mycobacterium tube 90.64
d1j6ua189 UDP-N-acetylmuramate-alanine ligase MurC {Thermoto 90.27
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 89.93
d1cjca1225 Adrenodoxin reductase of mitochondrial p450 system 89.45
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 89.33
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 89.27
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 89.06
d2dt5a2126 Transcriptional repressor Rex, C-terminal domain { 89.03
d1xgka_350 Negative transcriptional regulator NmrA {Aspergill 88.78
d2c5aa1363 GDP-mannose-3', 5'-epimerase {Thale cress (Arabido 88.38
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 87.66
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 87.06
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 86.98
d1vl6a1222 Malate oxidoreductase (malic enzyme) {Thermotoga m 86.89
d1fjha_257 3-alpha-hydroxysteroid dehydrogenase {Comamonas te 86.76
d5mdha1154 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 86.61
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 85.95
d1dhra_236 Dihydropteridin reductase (pteridine reductase) {R 84.82
d1c1da1201 Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ 84.74
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 84.7
d1uzma1237 beta-keto acyl carrier protein reductase {Mycobact 84.69
d7mdha1175 Malate dehydrogenase {Sorghum (Sorghum vulgare), c 84.52
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 84.29
d1ulua_256 Enoyl-ACP reductase {Thermus thermophilus [TaxId: 83.93
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 83.77
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 83.75
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 83.71
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 83.68
d2pd4a1274 Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 83.35
d1udca_338 Uridine diphosphogalactose-4-epimerase (UDP-galact 83.03
d2h7ma1268 Enoyl-ACP reductase {Mycobacterium tuberculosis, T 82.72
d1d7oa_297 Enoyl-ACP reductase {Oil seed rape (Brassica napus 82.54
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 82.36
d1qsga_258 Enoyl-ACP reductase {Escherichia coli [TaxId: 562] 82.35
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 82.24
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 81.94
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 81.84
d1rpna_321 GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos 81.77
d2b69a1312 UDP-glucuronate decarboxylase 1 {Human (Homo sapie 81.37
d1uaya_241 Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t 81.31
d1y7ta1154 Malate dehydrogenase {Thermus thermophilus [TaxId: 81.16
d2ag5a1245 Dehydrogenase/reductase SDR family member 6, DHRS6 81.0
d1ulsa_242 beta-keto acyl carrier protein reductase {Thermus 80.84
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 80.68
d1yovb1426 UBA3 {Human (Homo sapiens) [TaxId: 9606]} 80.53
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 80.46
d1o5ia_234 beta-keto acyl carrier protein reductase {Thermoto 80.43
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 80.04
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-21  Score=187.81  Aligned_cols=239  Identities=20%  Similarity=0.246  Sum_probs=128.1

Q ss_pred             eEEEECCChHHHHHHHHHHHcCCceEEEeccccCCCC----------------------ChhHHHHHHHcCCCCcccccc
Q 010539           59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLVGA----------------------YPNIQNLFGELGINDRLQWKE  116 (508)
Q Consensus        59 dVvIIGaG~aGlsaA~~L~~~g~~V~vlE~~~~~~g~----------------------~~~~~~l~~~lg~~~~~~~~~  116 (508)
                      ||||||||++||+||++|+++|++|+|||+++++||.                      ++.+.++++++|++.......
T Consensus         1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~   80 (383)
T d2v5za1           1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEV   80 (383)
T ss_dssp             SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECCCS
T ss_pred             CEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCcceeeEEECCCCcEEeCCceEeCCCChHHHHHHHHcCCcceeccCc
Confidence            8999999999999999999999999999999988663                      345668888888764322211


Q ss_pred             ccceeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHh-hcchhhHhcCcchhhcccCccHHHHHHHcC
Q 010539          117 HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA-IGLLPAIIGGQAYVEAQDGLTVQEWMRKQG  195 (508)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  195 (508)
                      ....+....     ....+................. .   ....+... .................+..++.+++....
T Consensus        81 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (383)
T d2v5za1          81 ERLIHHVKG-----KSYPFRGPFPPVWNPITYLDHN-N---FWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLC  151 (383)
T ss_dssp             SEEEEEETT-----EEEEECSSSCCCCSHHHHHHHH-H---HHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHC
T ss_pred             cceEEecCc-----ccccccccccchhhhhhhhhHH-H---HHHHHHHhhhhcccccccchhhhhhhhhhHHHHHHHHhc
Confidence            111111100     0001111111111100000000 0   00000000 000000001111222334668888888875


Q ss_pred             CChhhHHHHHHHHHhhcccCCCCcchHHHHHHHHHHH------hhhccCCeEEeecCCccccchHHHHHHHHHcCCEEEe
Q 010539          196 VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRL  269 (508)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~g~~i~~  269 (508)
                      .... ....+...........+...+...........      .....+.....+.++ ...+.+.+   +++.|++|++
T Consensus       152 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l---~~~~g~~i~~  226 (383)
T d2v5za1         152 WTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERI---MDLLGDRVKL  226 (383)
T ss_dssp             SSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHH---HHHHGGGEEE
T ss_pred             cchH-HHHHHHHhhhhhhccccchhhHHHHHHHHHhhcccccccccccCcceeeeccc-hhHHHHHH---HHHcCCeEEe
Confidence            5543 33344444555555566666655544332211      111111122222222 33333333   3456899999


Q ss_pred             CceeeEEEEcCCCcEEEEEEcCCcEEEccEEEEccChHHHhhhc
Q 010539          270 NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL  313 (508)
Q Consensus       270 ~~~V~~I~~~~~g~~~~V~~~~g~~i~ad~VI~A~~~~~~~~ll  313 (508)
                      |++|++|..++++ + .|++.+|+++.||+||+|+|+..+.++.
T Consensus       227 ~~~v~~I~~~~~~-v-~v~~~~g~~~~ad~vI~a~p~~~~~~~~  268 (383)
T d2v5za1         227 ERPVIYIDQTREN-V-LVETLNHEMYEAKYVISAIPPTLGMKIH  268 (383)
T ss_dssp             SCCEEEEECSSSS-E-EEEETTSCEEEESEEEECSCGGGGGGSE
T ss_pred             cCcceEEEecCCe-E-EEEECCCCEEECCEEEECCCHHHHhhCc
Confidence            9999999975444 3 4889999999999999999987655543
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ivda2 d.16.1.5 (A:307-414) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d1seza2 d.16.1.5 (A:330-441) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Back     information, alignment and structure
>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure