Citrus Sinensis ID: 010597
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 506 | ||||||
| 255540691 | 658 | EXECUTER1 protein, chloroplast precursor | 0.948 | 0.729 | 0.763 | 0.0 | |
| 359491590 | 648 | PREDICTED: protein EXECUTER 1, chloropla | 0.948 | 0.740 | 0.736 | 0.0 | |
| 297733793 | 656 | unnamed protein product [Vitis vinifera] | 0.948 | 0.731 | 0.736 | 0.0 | |
| 449518939 | 657 | PREDICTED: protein EXECUTER 1, chloropla | 0.948 | 0.730 | 0.701 | 0.0 | |
| 449441021 | 609 | PREDICTED: protein EXECUTER 1, chloropla | 0.948 | 0.788 | 0.701 | 0.0 | |
| 357462003 | 630 | Protein EXECUTER [Medicago truncatula] g | 0.934 | 0.750 | 0.671 | 0.0 | |
| 356518979 | 634 | PREDICTED: protein EXECUTER 1, chloropla | 0.938 | 0.749 | 0.648 | 0.0 | |
| 356507232 | 632 | PREDICTED: protein EXECUTER 1, chloropla | 0.938 | 0.751 | 0.654 | 1e-178 | |
| 297851182 | 647 | predicted protein [Arabidopsis lyrata su | 0.936 | 0.732 | 0.592 | 1e-158 | |
| 18396370 | 651 | uncharacterized protein [Arabidopsis tha | 0.942 | 0.732 | 0.564 | 1e-150 |
| >gi|255540691|ref|XP_002511410.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus communis] gi|223550525|gb|EEF52012.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/482 (76%), Positives = 427/482 (88%), Gaps = 2/482 (0%)
Query: 26 VGWWVGYSKDSDDPFGRLIQIKPGVGRFVARNYSPRQLVTASPGTPLFEIFVVKDNEESY 85
VGWWVGYS DSDDPFGRL++I PGVGRFV R+YSPRQLVTASPGTPLFEIFVVKD +E Y
Sbjct: 178 VGWWVGYSTDSDDPFGRLVRITPGVGRFVGRSYSPRQLVTASPGTPLFEIFVVKDADERY 237
Query: 86 VMQVVHLKQAKGTSTNSTSSPSKSTKSPSTSEVENASVVDVQGTKVKEERSDEKGINIEG 145
VMQVV L++AK +TNST SPSKS KSPS SEVE S +DVQG +VK ERS+EKGINIEG
Sbjct: 238 VMQVVCLQRAKSVATNSTGSPSKSGKSPSPSEVEKESELDVQGNEVKAERSEEKGINIEG 297
Query: 146 VTEEGIKSVINFLKEKIPGLKVKVMNIDITAEVTDDADSLKQLIQDGEE-AESSDSEGEA 204
TEEGIKSVINFLK+KIPGLKVKVMN++ T EV +D DS+KQL+QD E+ A S SE E+
Sbjct: 298 ATEEGIKSVINFLKDKIPGLKVKVMNVNATEEVVEDNDSVKQLMQDDEKIASSESSEDES 357
Query: 205 DDIEEIQPDEVALEGANEASEDEKELDTKVFIGGVVHNNEDAPTKDEYVRMPADVKDLEK 264
+++EEIQP V++EG + ++D K+LD K+FIGGVVHN+ED P+KDEYVR+PA++KD+E+
Sbjct: 358 NELEEIQPAGVSVEGNTDPTDDGKDLDMKLFIGGVVHNDEDTPSKDEYVRLPAEIKDIER 417
Query: 265 DSFVLHVPAKSLDYDHTGESKMSKLKVAALAAQGVSELMPFDVAKAFWSSDKASSKVSRD 324
DSF LH+P KSL+YD + E K SK+KVAA+AA+GVSELMP D+AKAFW +DK SSKVSRD
Sbjct: 418 DSFALHIPEKSLEYD-SKERKASKIKVAAIAAKGVSELMPPDIAKAFWGADKVSSKVSRD 476
Query: 325 VREVLKLAVSQAQKQSRLSEYTTFSRINTSEGDLDPFDGLYVGAFGPYGTEVVQLRRKYG 384
VRE++KLAVSQAQKQSRLS++T FSRINTS + DPFDGLYVGAFGPYGTEVVQLRRK+G
Sbjct: 477 VREIVKLAVSQAQKQSRLSKHTNFSRINTSNNNFDPFDGLYVGAFGPYGTEVVQLRRKFG 536
Query: 385 QWSGEGEKSSDMEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVA 444
W+ +KSSD+EFFEYVEAVKLTGDLNVPAG+VTFRAKIGKGSR PNRG +PDELGVVA
Sbjct: 537 HWNVTDDKSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRNPNRGMYPDELGVVA 596
Query: 445 SYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKL 504
SY GQGRIA+FGFRNP+WVDGELLQLNGKG+GPYVKGADLGFLYV+PEQSFLVLFNRLKL
Sbjct: 597 SYKGQGRIAEFGFRNPQWVDGELLQLNGKGLGPYVKGADLGFLYVIPEQSFLVLFNRLKL 656
Query: 505 PD 506
P+
Sbjct: 657 PE 658
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491590|ref|XP_002279734.2| PREDICTED: protein EXECUTER 1, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297733793|emb|CBI15040.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449518939|ref|XP_004166493.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449441021|ref|XP_004138282.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357462003|ref|XP_003601283.1| Protein EXECUTER [Medicago truncatula] gi|355490331|gb|AES71534.1| Protein EXECUTER [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356518979|ref|XP_003528152.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356507232|ref|XP_003522373.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297851182|ref|XP_002893472.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339314|gb|EFH69731.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|18396370|ref|NP_564287.1| uncharacterized protein [Arabidopsis thaliana] gi|15027911|gb|AAK76486.1| unknown protein [Arabidopsis thaliana] gi|21281187|gb|AAM45133.1| unknown protein [Arabidopsis thaliana] gi|332192719|gb|AEE30840.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 506 | ||||||
| TAIR|locus:2196889 | 651 | EX2 "EXECUTER 2" [Arabidopsis | 0.940 | 0.731 | 0.548 | 1.7e-139 | |
| TAIR|locus:2134168 | 684 | EX1 "EXECUTER1" [Arabidopsis t | 0.920 | 0.681 | 0.392 | 6.8e-79 | |
| ASPGD|ASPL0000031789 | 457 | AN5209 [Emericella nidulans (t | 0.250 | 0.277 | 0.284 | 0.00017 |
| TAIR|locus:2196889 EX2 "EXECUTER 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 266/485 (54%), Positives = 356/485 (73%)
Query: 26 VGWWVGYSKDSDDPFGRLIQIKPGVGRFVARNYSPRQLVTASPGTPLFEIFVVKDNEESY 85
VGWWVG +DS++PFGR++ I PGVGRF+ ++YSPRQLV + GTPLFEIFV+KD + Y
Sbjct: 172 VGWWVGLPRDSEEPFGRIVHITPGVGRFIGKSYSPRQLVAEAAGTPLFEIFVIKDTDGGY 231
Query: 86 VMQVVHLKQAKGXXXXXXXXXXXXXXXXXXXEVENASVVDVQGTKVKEERSDEKGINIEG 145
VMQVV+++ K + + S++DV+G+++K ++ ++ +N
Sbjct: 232 VMQVVYVQHVK-QNLTISENSFSKVQQSSKSSINDPSILDVRGSELKVDKKEDTQLNAGE 290
Query: 146 VTEEGIKSVINFLKEKIPGLKVKVMN-IDITAE-VTDDADSLKQLIQXXXXXXXXXXXXX 203
TEEGIK+VI FLK+KIPGLK+KVM+ I I E + D+ ++L+
Sbjct: 291 PTEEGIKNVIKFLKDKIPGLKLKVMDVIKIPEEEIVGSDDATEELV--GEGTEETNSSDD 348
Query: 204 XXXXXXXQPDEVALEGANEASEDEKELDTKVFIGGVVHNNEDAPTKDEYVRMPADVKDLE 263
+ D + + ++++ K +TK+ IGGV+HN ED+ DE VR+ A++ D E
Sbjct: 349 EEEVEEEENDSIEAISSMDSADYGKHSNTKLVIGGVLHNIEDSSIDDEIVRVSANIMDTE 408
Query: 264 KDSFVLHVPAKSL-DYDHTGESKMSKLKVAALAAQGVSELMPFDVAKAFWSSDKASSKVS 322
+DSF+LHVP +S D D T ++++SK +V ALAAQG+S+L+P +VA+AFW +KAS KVS
Sbjct: 409 RDSFILHVPGRSKRDID-TRKNRVSKEQVTALAAQGLSDLLPPEVAEAFWG-EKASLKVS 466
Query: 323 RDVREVLKLAVSQAQKQSRLSEYTTFSRINTSEGDLDPFDGLYVGAFGPYGTEVVQLRRK 382
+ V E++KLA++QAQK + LSEYT F+RI T E +LDPFDGLYVGAFGPYGTE+VQL+RK
Sbjct: 467 KHVHEIVKLAINQAQKGNHLSEYTAFNRIITPESNLDPFDGLYVGAFGPYGTEIVQLKRK 526
Query: 383 YGQWS-GEGEKSSDMEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELG 441
YG+W EG SSD+EFFEYVEAVKLTGD NVPAG+VTFRA+IG GSR+ N G FP+ELG
Sbjct: 527 YGRWDDAEGSNSSDIEFFEYVEAVKLTGDPNVPAGQVTFRARIGNGSRMTNHGLFPEELG 586
Query: 442 VVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNR 501
V+ASY GQG+IADFGF+ P+WV+G+LL+LNGKGMGPYVKGADLGFLY+ PEQSFLVLFNR
Sbjct: 587 VLASYRGQGKIADFGFKKPRWVEGKLLKLNGKGMGPYVKGADLGFLYIGPEQSFLVLFNR 646
Query: 502 LKLPD 506
L+LP+
Sbjct: 647 LRLPE 651
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| TAIR|locus:2134168 EX1 "EXECUTER1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000031789 AN5209 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00016102001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (656 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 506 | |||
| pfam12014 | 138 | pfam12014, DUF3506, Domain of unknown function (DU | 4e-58 |
| >gnl|CDD|192915 pfam12014, DUF3506, Domain of unknown function (DUF3506) | Back alignment and domain information |
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Score = 188 bits (480), Expect = 4e-58
Identities = 77/138 (55%), Positives = 96/138 (69%), Gaps = 7/138 (5%)
Query: 343 SEYTTFSRIN---TSEGDLDPFDGLYVGAFGPYGTEVVQLRRKYGQWSGE--GEKSSDME 397
TTFSRI+ + DP+ GLYVGA+ +G E + L +K GQW + ++ SD+E
Sbjct: 1 EGLTTFSRIDPELYTPTPEDPYRGLYVGAYSGHGCEFLLLLQKDGQWKEDDGSKEPSDIE 60
Query: 398 FFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLP--NRGKFPDELGVVASYSGQGRIADF 455
F+EYVEA+KLTGD NVP G+VTFRAKIGKG + G FP+ELGV+ GQG IAD
Sbjct: 61 FYEYVEAIKLTGDPNVPRGQVTFRAKIGKGGLVRVAEEGLFPEELGVIRVVKGQGHIADP 120
Query: 456 GFRNPKWVDGELLQLNGK 473
GFRNP+WVDGELL L+GK
Sbjct: 121 GFRNPRWVDGELLLLSGK 138
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This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 131 to 148 amino acids in length. This domain has a conserved KLTGD sequence motif. Length = 138 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 506 | |||
| PF12014 | 134 | DUF3506: Domain of unknown function (DUF3506); Int | 100.0 |
| >PF12014 DUF3506: Domain of unknown function (DUF3506); InterPro: IPR021894 This presumed domain is functionally uncharacterised | Back alignment and domain information |
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Probab=100.00 E-value=3.8e-50 Score=362.02 Aligned_cols=129 Identities=43% Similarity=0.763 Sum_probs=115.6
Q ss_pred CCcccceEee-eeeCCCCCCCCCCceEEeccCCCCcEEEEEEEecCCCCCCCC--CCCccccceEEEEEEEcCCCCccCe
Q 010597 340 SRLSEYTTFS-RINTSEGDLDPFDGLYVGAFGPYGTEVVQLRRKYGQWSGEGE--KSSDMEFFEYVEAVKLTGDLNVPAG 416 (506)
Q Consensus 340 ~~l~~~tt~~-rIytPt~~~dP~~GLwVG~Yg~HG~EfL~L~~~~g~~~~~d~--~~s~~~~~~~LeAVKLTGDpNVPrG 416 (506)
+.++||+|++ ++||||+ .|||+|||||+||+||||||+|+|++++|.++++ ..++.+|+++|||||||||||||||
T Consensus 1 ~~~ttfstl~p~lytpt~-~~P~~GiwVGdyg~hG~Efl~l~q~~~~~~~~~~~~~~~~~~~~~~leAiKLTGDpNVPrG 79 (134)
T PF12014_consen 1 EGVTTFSTLDPELYTPTP-EKPFRGIWVGDYGPHGCEFLLLHQPDGQWDEDDGSKEPSDREFRGRLEAIKLTGDPNVPRG 79 (134)
T ss_pred CCceEEEecChhccCCCC-CCCccceEEcccCCCCeEEEEEEccCCCccccccccccccccccceEEEEEecCCCCCcCc
Confidence 3567777777 8889999 9999999999999999999999999999987766 3578899999999999999999999
Q ss_pred eEEEEEE-cCCCCCCCCCCCCCCCCCceeE-EEeeeeecCCCCCCCceeeeEEEEEcC
Q 010597 417 EVTFRAK-IGKGSRLPNRGKFPDELGVVAS-YSGQGRIADFGFRNPKWVDGELLQLNG 472 (506)
Q Consensus 417 evTF~A~-ig~~~~lp~~G~~peel~~~aR-vkg~G~VA~~GF~np~wI~gqLilis~ 472 (506)
||||+|+ ||+++++ +++.++++.++| ||||||||++||+|++||+|||||||+
T Consensus 80 evtF~A~DiG~~~~i---~~a~~~~f~G~r~vk~~G~vA~~GF~~~~~id~eLilis~ 134 (134)
T PF12014_consen 80 EVTFRADDIGPGGRI---RVAHEGPFPGARRVKGQGHVAEPGFRNDKWIDGELILISG 134 (134)
T ss_pred cEEEEecccCCCccc---ccccCCCCCceEEEecCCeEcCcCcCCCcceeeEEEEecC
Confidence 9999999 9999998 444455555666 999999999999999999999999985
|
This domain is found in eukaryotes. This domain is typically between 131 to 148 amino acids in length. This domain has a conserved KLTGD sequence motif. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 506 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 4e-04
Identities = 33/246 (13%), Positives = 70/246 (28%), Gaps = 63/246 (25%)
Query: 145 GVTEEGIKSVINFLKEKIPGLKVKVMNIDITAEVTDDADSLKQLIQDGEEAESSDSEGEA 204
G + K +++ ++ V N D D D K ++ S+ E
Sbjct: 12 GEHQYQYKDILSVFEDAF------VDNFD----CKDVQDMPKSIL----------SKEEI 51
Query: 205 DDIEEIQPDEVALEGANEASEDEKELDTKVFIGGVVHNN-------------EDAPTKDE 251
D I + ++E + F+ V+ N + +
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 252 YV----RMPADVKDLEKDSFVLHVP-----------AKSLDYD-----H--TGESKMSKL 289
Y+ R+ D + K +V L G K + +
Sbjct: 112 YIEQRDRLYNDNQVFAK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK-TWV 166
Query: 290 KVAALAAQGVSELMPFDVAKAFWSSDKASSKVSRDVREVLKLAVSQAQKQSRLSEYTTFS 349
+ + V M F + FW + K + + + KL + S++++
Sbjct: 167 ALDVCLSYKVQCKMDFKI---FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 350 RINTSE 355
++
Sbjct: 224 KLRIHS 229
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00