Citrus Sinensis ID: 011095


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----
MGGCISVHSGKSRVHRKYFRKYGKRRGKFSALIHNVPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKIDGGKTDRECKGTNDSGEKNHENRKKSTVIMLSVKRKSYDGEAATGFCQAERYLYRPRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIPTIVPQS
ccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccEEcccccccccccccccccccccEEEccccccccccccccccccccccccccccEEEcccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccEEEEEEEcccccccccccccccccEEEEEEEcccHHHHHHcccHHHHHHHHccHHHHHHHccccccccccccEEEEEEEEcccccccHHHHHHHHHHHcccccccccccccEEEcccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEcEEEEcccccccccccccccccc
ccccccccccccccccHcccccccccccccccccccccccccccccccEEEccEEEEEEcccccccccccccccccEEEEEEEEEcccccccccccHHHHHHccHHEEccccccccccccccccccccccccccccccEcccccccccccccccHHHHHcccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccHHHccccccccccccccccccccccccccccccEEEEccccccccccccccccccccEEEEHHccccHcHHHHHcccccccHcccccccEEEEEEEEccccccHHcccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccEEEccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHEEHHHHHEEcccHHHccHHEEEEEEEcccccccccccccccccc
mggcisvhsgksrvHRKYFRKYGKRRGKFSALIHnvprkrlndggigdfavshefvhldfekgaattckrsevtnknFHVTQMQWnhsqidsngicqeeawydsvsiidsdsdddyssvhgdtfpsvgtpighisngqllqyETASRFVDTGSKYEEFYESYLKidggktdreckgtndsgeknhenrkKSTVIMLSVkrksydgeaatGFCQaerylyrpragflvpratgeksnpgcwselspsvfrlrgenyfrdkqktpapnyspyvpigvdlFACSRKINHIAQhlelpqvktnekvpSLLIVNiqlptypacmfgesdgegMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMagvvnpedlhlSSTERKLMQayndkpvlsrpqhdffkgpnyfeidldihRFSYISRKGFESFRNRLKEGIIDLgltiqaqkpeelpeQVLCCVRLnkigfenhgqiptivpqs
mggcisvhsgksrvhrKYFRkygkrrgkfsalihnvprkrlNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYlkidggktdreckgtndsgeknhenrkkstvimlsvkrksydgEAATGFCQAERYLYRPRAGFLVPratgeksnpgcwselspSVFRLRGENYFRdkqktpapnyspYVPIGVDLFACSRKINHIAQhlelpqvktnEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKgfarestvpfrerLKIMagvvnpedlhLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIgfenhgqiptivpqs
MGGCISVHSGKSRVHrkyfrkygkrrgkfSALIHNVPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWydsvsiidsdsdddyssvHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKIDGGKTDRECKGTNDSGEKNHENRKKSTVIMLSVKRKSYDGEAATGFCQAERYLYRPRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIPTIVPQS
*************VHRKYFRKYGKRRGKFSALIHNVPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDS********VHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKID**************************VIMLSVKRKSYDGEAATGFCQAERYLYRPRAGFLVPRATG***NPGCWSELSPSVFRLRGENYFRDK****APNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPE*******************VLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIP******
***C***********************************************SHEFVHLDFE****************FHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVHGDTFPSVG*****************************************************************************************LYRPRAGFLVP**********CWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELP***TNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETF**********SIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIPTIV***
MGGCISVHSGKSRVHRKYFRKYGKRRGKFSALIHNVPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKIDGGKTD*****************KKSTVIMLSVKRKSYDGEAATGFCQAERYLYRPRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIPTIVPQS
***********************************VPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTC*R**VTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYS*V***********************************************************************STVIMLSVKRKS*************RYLYRPRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQI*******
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGCISVHSGKSRVHRKYFRKYGKRRGKFSALIHNVPRKRLNDGGIGDFAVSHEFVHLDFEKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVHGDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKIDGGKTDRECKGTNDSGEKNHENRKKSTVIMLSVKRKSYDGEAATGFCQAERYLYRPRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVRLNKIGFENHGQIPTIVPQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query494
255542142513 conserved hypothetical protein [Ricinus 0.987 0.951 0.695 0.0
296082961558 unnamed protein product [Vitis vinifera] 0.991 0.878 0.596 0.0
225452909564 PREDICTED: uncharacterized protein LOC10 0.991 0.868 0.586 0.0
255578310545 conserved hypothetical protein [Ricinus 0.991 0.899 0.585 0.0
357487309500 hypothetical protein MTR_5g042910 [Medic 0.965 0.954 0.661 1e-180
356497938494 PREDICTED: uncharacterized protein LOC10 0.973 0.973 0.638 1e-180
356502579510 PREDICTED: uncharacterized protein LOC10 0.973 0.943 0.636 1e-178
449495988509 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.979 0.950 0.651 1e-172
449442449510 PREDICTED: uncharacterized protein LOC10 0.979 0.949 0.650 1e-172
356526457561 PREDICTED: uncharacterized protein LOC10 0.989 0.871 0.551 1e-168
>gi|255542142|ref|XP_002512135.1| conserved hypothetical protein [Ricinus communis] gi|223549315|gb|EEF50804.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/512 (69%), Positives = 407/512 (79%), Gaps = 24/512 (4%)

Query: 1   MGGCISVHSGKSRVHRKYFRKYGKRRGKFSALIHNVPRKRLNDGGIGDFAVSHEFVHLDF 60
           MGGC+S  + K+R HRK   K+   RGK S  + +VP KR +D G+GDFAV  EFVHLDF
Sbjct: 1   MGGCVSTANKKTRSHRKRHLKFTNHRGKISTSVPDVPMKRFSDAGLGDFAV-REFVHLDF 59

Query: 61  EKGAATTCKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWYDSVSIIDSDSDDDYSSVH 120
           EKGAATTC+RSE TNKN H TQ+QWNHSQI  NGICQEE W+DSVSIIDSDSDDD+ S+H
Sbjct: 60  EKGAATTCRRSEATNKNIHHTQLQWNHSQIAGNGICQEEVWFDSVSIIDSDSDDDFISIH 119

Query: 121 GDTFPSVGTPIGHISNGQLLQYETASRFVDTGSKYEEFYESYLKIDGG--KTDRECKGTN 178
           GD FP+V + IG   + Q+LQY  AS FVDTGSKYE FYESYLKIDGG  K+D     T 
Sbjct: 120 GDGFPTVCSTIGQKPSAQVLQYGAASCFVDTGSKYEGFYESYLKIDGGVPKSDEISTKTK 179

Query: 179 ------------------DSGEKNHENRKKSTVIMLSVKRKSYDGEAATGFCQAERYLYR 220
                             ++GEK  ENR+KSTVIM+S+KRKS D +  T F  + R LYR
Sbjct: 180 KVMDDSYGSFKGLKELSYETGEKVQENRRKSTVIMISLKRKSCDRDERTQF--SGRLLYR 237

Query: 221 PRAGFLVPRATGEKSNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFAC 280
           PRAGF +P + GEK   GCWSE+SPSVF+LRGENYFRDKQK PAPN SPY+PIGVD FAC
Sbjct: 238 PRAGFQIPGSKGEKPTSGCWSEVSPSVFKLRGENYFRDKQKCPAPNISPYIPIGVDFFAC 297

Query: 281 SRKINHIAQHLELPQVKTNEKVPSLLIVNIQLPTYPACMF-GESDGEGMSLVLYFRVSET 339
            RKI HIAQHLELP V+ +E +PSLLIVNIQLPTYP  MF GE DGEGMSLVLYF++S+ 
Sbjct: 298 PRKIRHIAQHLELPYVQPHENLPSLLIVNIQLPTYPVAMFQGECDGEGMSLVLYFKLSDN 357

Query: 340 FEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKL 399
           F+KEIS HFQ++IKR V+D+MEKVKGFA+E TVPFRERLKI+AG+VNPEDL L S ERKL
Sbjct: 358 FDKEISPHFQETIKRLVEDDMEKVKGFAKECTVPFRERLKILAGLVNPEDLQLGSAERKL 417

Query: 400 MQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQ 459
           +QAYNDKPVLSRPQH+FF+GPNYFEIDLDIHRFSYISRKG E+FR R+K GI ++GLTIQ
Sbjct: 418 IQAYNDKPVLSRPQHEFFRGPNYFEIDLDIHRFSYISRKGLEAFRERMKHGIANVGLTIQ 477

Query: 460 AQKPEELPEQVLCCVRLNKIGFENHGQIPTIV 491
           AQKPEELPEQVLCCVRLNKI F NHGQIPTIV
Sbjct: 478 AQKPEELPEQVLCCVRLNKIDFVNHGQIPTIV 509




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082961|emb|CBI22262.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225452909|ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245770 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255578310|ref|XP_002530022.1| conserved hypothetical protein [Ricinus communis] gi|223530501|gb|EEF32384.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|357487309|ref|XP_003613942.1| hypothetical protein MTR_5g042910 [Medicago truncatula] gi|355515277|gb|AES96900.1| hypothetical protein MTR_5g042910 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356497938|ref|XP_003517813.1| PREDICTED: uncharacterized protein LOC100794541 [Glycine max] Back     alignment and taxonomy information
>gi|356502579|ref|XP_003520096.1| PREDICTED: uncharacterized protein LOC100798811 [Glycine max] Back     alignment and taxonomy information
>gi|449495988|ref|XP_004160004.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101223025 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449442449|ref|XP_004138994.1| PREDICTED: uncharacterized protein LOC101223025 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356526457|ref|XP_003531834.1| PREDICTED: uncharacterized protein LOC100807449 isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query494
TAIR|locus:2014819504 AT1G13970 "AT1G13970" [Arabido 0.977 0.958 0.561 4.9e-140
TAIR|locus:2093868513 AT3G29180 "AT3G29180" [Arabido 0.613 0.590 0.681 3.5e-131
TAIR|locus:2175648511 AT5G39430 "AT5G39430" [Arabido 0.621 0.600 0.659 1.9e-124
TAIR|locus:2012848485 AT1G10410 [Arabidopsis thalian 0.603 0.614 0.556 4e-90
TAIR|locus:2202877492 CW14 "AT1G59650" [Arabidopsis 0.601 0.603 0.556 6.7e-88
TAIR|locus:2182417811 AT5G35180 [Arabidopsis thalian 0.329 0.200 0.269 1.3e-10
TAIR|locus:2183705302 AT5G10750 "AT5G10750" [Arabido 0.123 0.201 0.387 6.6e-08
TAIR|locus:2179245286 AT5G25010 "AT5G25010" [Arabido 0.196 0.339 0.294 1.2e-07
TAIR|locus:2149428294 AT5G24990 "AT5G24990" [Arabido 0.121 0.204 0.327 2e-06
TAIR|locus:2117134724 EDR2 "ENHANCED DISEASE RESISTA 0.242 0.165 0.257 2.7e-06
TAIR|locus:2014819 AT1G13970 "AT1G13970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 285/508 (56%), Positives = 355/508 (69%)

Query:     1 MGGCISVH---SGKSRVHXXXXXXXXXXXXXXSALIHNVPRKRLNDGGIGDFAVSHEFVH 57
             MGGC+S     S K +                SA + +VP KR+++  + DFAVS E+VH
Sbjct:     1 MGGCVSSQRKLSNKLQQKKQKRGRSGKCRSKISASMPDVPMKRMSNASVRDFAVS-EYVH 59

Query:    58 LDFEKGAATT-CKRSEVTNKNFHVTQMQWNHSQIDSNGICQEEAWXXXXXXXXXXXXXXX 116
             LDF+  AA   CKR+E++N NFH+TQ+QWN SQID N I  EEAW               
Sbjct:    60 LDFDNCAAKMMCKRAEMSNANFHLTQLQWNCSQIDGNRISHEEAWYDSFSYIDSDSDDGS 119

Query:   117 XXXHGDTFPSVGTPIGHISNGQLLQYET--ASRFVDTGSKYEEFY-ESYLKIDGGKT-DR 172
                +   F          + GQ++QYE    S     G+K E +  ++ + I   +  D 
Sbjct:   120 ---NSSVFEDANAS----AMGQVIQYEEFYESYLKIDGNKGETYSSKNEVSIKRNQVADE 172

Query:   173 ECKGT--NDSGEKNHENRKKST-VIMLSVKRKSYDGEAATG-FCQAERYLYRPRAGFLVP 228
                 T    + E + ++RKKS+ V+M+SV+R S D ++    F  AE+ LYRP+AG ++ 
Sbjct:   173 SHHETFKTTTCEDHQDHRKKSSKVVMVSVRRTSIDSKSTPSEFSSAEKLLYRPKAGSMIQ 232

Query:   229 RATGEK-SNPGCWSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHI 287
             R+ GEK ++ G WSE+SPS F+LRG N+FRDKQK PAPN SPY+PIGVDLFAC +KINHI
Sbjct:   233 RSLGEKMTSQGSWSEVSPSSFKLRGLNFFRDKQKCPAPNCSPYIPIGVDLFACPKKINHI 292

Query:   288 AQHLELPQVKTNEK----VPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKE 343
             AQH+ELP +K        +P+LLIVNIQLP YP  MFG+ DGEG+SLVLYF+ +E + KE
Sbjct:   293 AQHIELPNLKPASSQVCDIPNLLIVNIQLPMYPTSMFGDYDGEGLSLVLYFKRNENYHKE 352

Query:   344 ISVHFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAY 403
             IS HF+++IKRF++DEMEKVKGF RESTVPFRERLKIMAG+VNPED  LSSTERKL+ AY
Sbjct:   353 ISSHFKETIKRFMEDEMEKVKGFTRESTVPFRERLKIMAGLVNPEDFQLSSTERKLITAY 412

Query:   404 NDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKP 463
             ND+PVLSRPQHDFF+GPNYFEIDLDIHRFSYISRKG ESFR+R+K GI+DLGLTIQAQ P
Sbjct:   413 NDRPVLSRPQHDFFQGPNYFEIDLDIHRFSYISRKGLESFRDRIKNGILDLGLTIQAQSP 472

Query:   464 EELPEQVLCCVRLNKIGFENHGQIPTIV 491
             EELPEQVLCCVRLNKI F NHGQIPT++
Sbjct:   473 EELPEQVLCCVRLNKIDFVNHGQIPTLL 500




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0010359 "regulation of anion channel activity" evidence=RCA
TAIR|locus:2093868 AT3G29180 "AT3G29180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175648 AT5G39430 "AT5G39430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012848 AT1G10410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202877 CW14 "AT1G59650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149428 AT5G24990 "AT5G24990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117134 EDR2 "ENHANCED DISEASE RESISTANCE 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query494
pfam07059215 pfam07059, DUF1336, Protein of unknown function (D 3e-95
PLN00188719 PLN00188, PLN00188, enhanced disease resistance pr 4e-11
>gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336) Back     alignment and domain information
 Score =  286 bits (735), Expect = 3e-95
 Identities = 110/244 (45%), Positives = 141/244 (57%), Gaps = 34/244 (13%)

Query: 240 WSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELP-QVKT 298
           WSE  PS F++RG+ Y +DK+K PA N   Y  IGVD F   +KI+HIA H +L  Q   
Sbjct: 1   WSEPDPSTFKVRGKTYLKDKKKIPAGNP-LYTLIGVDWFKSDKKIDHIANHPDLRVQKAA 59

Query: 299 NEKVPSLLIVNIQLPTYPACMFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVD- 357
            + +P +LIVNIQ+P           GEG SLVLYF + E  EKE+S  F   ++RFVD 
Sbjct: 60  KKGLPFVLIVNIQVP----------GGEGYSLVLYFALEEPVEKELSPAFGSLLRRFVDG 109

Query: 358 DEMEKVKGFARESTVPFRERLKIMAGVVNPEDLHLSSTERKLMQAYNDKPVL--SRPQHD 415
           DE      F  E       RLKI+  +V       S   R+L+  YN+KP L    PQ +
Sbjct: 110 DE----DAFRNE-------RLKIIPRIVKG-----SWIVRQLV--YNEKPCLVGKAPQCN 151

Query: 416 FFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCVR 475
           +++GPNY EID+DI   S I+RKG E F   L   ++DL  TIQ Q  EELPE++L  VR
Sbjct: 152 YYRGPNYLEIDVDIGS-SSIARKGLELFLGYLTNLVLDLAFTIQGQTEEELPERLLGAVR 210

Query: 476 LNKI 479
           LNKI
Sbjct: 211 LNKI 214


This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215

>gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 494
PF07059227 DUF1336: Protein of unknown function (DUF1336); In 100.0
PLN00188719 enhanced disease resistance protein (EDR2); Provis 100.0
>PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=7e-75  Score=562.11  Aligned_cols=222  Identities=48%  Similarity=0.805  Sum_probs=208.3

Q ss_pred             cccCCCCceEecCCCCCCCCCcccCCCCCCcceeEeeeeecCcccchhhcccCccccccCC-CCCeEEEEEEEcCCCCCc
Q 011095          240 WSELSPSVFRLRGENYFRDKQKTPAPNYSPYVPIGVDLFACSRKINHIAQHLELPQVKTNE-KVPSLLIVNIQLPTYPAC  318 (494)
Q Consensus       240 WSepd~s~FkVRG~~Yl~DKkKvpA~~~al~~lvgVDlF~s~~ki~hIA~~~~lp~~~~~~-~~P~vfIVNiQlP~~P~~  318 (494)
                      ||+|++++|+|||+|||+||+|+||+++ +|+++|||||++++|++|||+|+.++..+... +.||+||||||||+||++
T Consensus         1 Ws~p~~~~FkVRG~~Yl~DkkKvpa~~~-l~~lvgvDlf~s~~~~~hia~~~~~~~~~~~~~~~P~~fIVNlqvP~~p~~   79 (227)
T PF07059_consen    1 WSEPDASTFKVRGPNYLKDKKKVPAGPP-LFELVGVDLFKSDKKIDHIARRPSSPVQKALEKGVPFTFIVNLQVPGYPPS   79 (227)
T ss_pred             CCCCCCCEEEEeCCCcccCCCCCcCCCc-ceeeEEEEEEecCCcchhhhhCcCCccccccccCCCcEEEEEEEccCCccc
Confidence            9999999999999999999999999976 89999999999999999999999888766544 589999999999999999


Q ss_pred             CCCCCCCCceEEEEEEeeCchhhhhhchhhHHHHHHHhhhhhhhhcccccCCChhhh-cceeeeeeeeCCCccccchHHH
Q 011095          319 MFGESDGEGMSLVLYFRVSETFEKEISVHFQDSIKRFVDDEMEKVKGFARESTVPFR-ERLKIMAGVVNPEDLHLSSTER  397 (494)
Q Consensus       319 ~Fg~~DGeg~SlVlYF~l~e~~~kei~~~f~~ll~Rfl~~e~Ekvkgf~~d~dd~fR-~RfKLIp~VVng~wl~L~~~~r  397 (494)
                      +|++.||+|||+|+||++++++.++..+.|.++++||++++.         .+|+|| +||||||+|+||+|+       
T Consensus        80 ~f~~~~~~~~s~V~Yf~~~~~~~~~~~~~~~~ll~rF~~gd~---------~~d~frn~RfKlIp~vv~gpwi-------  143 (227)
T PF07059_consen   80 MFGEIDGPGYSLVLYFRMPEPIEDDDSPPFGRLLHRFLNGDE---------VEDAFRNERFKLIPRVVNGPWI-------  143 (227)
T ss_pred             cccccccCCceEEEEEecCCccccccCchhHHHHHHHHhcCc---------cchhhhhccEEEEEEEcCCchh-------
Confidence            999999999999999999999988888889999999998631         137899 799999999999997       


Q ss_pred             HHHHhh-CCeeeeec--CceeeeeCCCEEEEEEeccCchHHHHHHHHhhhcccccEEEeeeEEeecCCCCCCccceecee
Q 011095          398 KLMQAY-NDKPVLSR--PQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTIQAQKPEELPEQVLCCV  474 (494)
Q Consensus       398 ~v~qav-n~KPvLir--~q~~y~~G~nY~EIDVDIhsFS~IAr~~l~lv~g~~k~LVVDlGFvIEGqteeELPErLLG~v  474 (494)
                       +++++ |+||||++  ++|+||+|+||||||||||+ |+|||++++++++|+|+|+|||||||||+++||||||||||+
T Consensus       144 -vr~~v~~~kP~lig~~~~~~y~~g~~y~E~dvdi~s-s~~a~~~~~~~~~~~~~lvvd~gf~ieg~~~~ELPE~lLg~~  221 (227)
T PF07059_consen  144 -VRKAVYNGKPVLIGKKLQHRYFRGPNYLEIDVDIHS-SYIARKVLHLVRGYLKKLVVDMGFVIEGQTEEELPERLLGCV  221 (227)
T ss_pred             -hhhhhcCCCceeecCccceEEeeCCCeEEEEEEecc-HHHHHHHHHHHHhhhceEEEEEEEEecCCChhhCchheEeEE
Confidence             67776 99999987  79999999999999999999 999999999999999999999999999999999999999999


Q ss_pred             eecccc
Q 011095          475 RLNKIG  480 (494)
Q Consensus       475 RL~~iD  480 (494)
                      ||++||
T Consensus       222 Rl~~id  227 (227)
T PF07059_consen  222 RLNHID  227 (227)
T ss_pred             EeeecC
Confidence            999998



>PLN00188 enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query494
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 55.6 bits (133), Expect = 2e-08
 Identities = 49/373 (13%), Positives = 108/373 (28%), Gaps = 110/373 (29%)

Query: 150 DTGS---KYEEFYESYLKIDGGKTDRECKGTNDS--------------GEKNHENRKKST 192
           +TG    +Y++    +   D    + +CK   D                 K+  +     
Sbjct: 10  ETGEHQYQYKDILSVFE--DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67

Query: 193 VIMLSVKRKSYDGEAATGFCQAERYL---YRPRAGFLVPRATGEKSNPGCWSELSPSVFR 249
              L  K++             ++++    R    FL+     E+  P     +   ++ 
Sbjct: 68  FWTLLSKQEE----------MVQKFVEEVLRINYKFLMSPIKTEQRQP----SMMTRMY- 112

Query: 250 LRGENYFRDKQKTPAPNYSPY-VPIGVDLFACSRKINHIAQHLELPQVKTNEKVP----- 303
                  RD+       ++ Y V          +    + Q L   +++  + V      
Sbjct: 113 ----IEQRDRLYNDNQVFAKYNVSR-------LQPYLKLRQALL--ELRPAKNVLIDGVL 159

Query: 304 ----SLLIVNIQLPTYPACMFG-----------ESDGEGMSLV--LYFRVSETFEKEISV 346
               + + +++ L     C               S    + ++  L +++   +      
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD- 218

Query: 347 HFQDSIKRFVDDEMEKVKGFARESTVPFRERLKIMAGVVNPE-----DLH---LSSTERK 398
               +IK  +     +++   +    P+   L ++  V N +     +L    L +T   
Sbjct: 219 -HSSNIKLRIHSIQAELRRLLKSK--PYENCLLVLLNVQNAKAWNAFNLSCKILLTT--- 272

Query: 399 LMQAYNDKPVLSRPQHDFFKGPNYFEIDLDIHRFSYISRKGFESFRNRLKEGIIDLGLTI 458
                  K V      DF        I LD H  +    +        L           
Sbjct: 273 -----RFKQVT-----DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD---------- 312

Query: 459 QAQKPEELPEQVL 471
              +P++LP +VL
Sbjct: 313 --CRPQDLPREVL 323


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00