Citrus Sinensis ID: 011920


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-----
MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPSVNSSASEDDSSEEEDVDYVCESKTVTPVVDNSVNKVALHPSVRSSKLAARNVQYRSSLNSRAIQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSKLRSSLQHSSVLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVGSSDQPGYSFLSGSPT
ccHHHHHHHHHHccccccccccccEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEccEEEEEcccEEEEcccEEEEEEcccccEEEEEEEcccEEEEEccccccccccccccEEEEEEEccccEEEEccccccHHHHHHHHHHHHHHcccccccccccccccEEEcccccccccccccccccEEEEccHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccccc
ccHHHHHHHHHHHHHccccHHcccEEEEccccccccEEEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEcccccEEEcccccccccccccccHHccccccccHccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccHccccccHHHHccccccccEEEEEEEEEEEcccccEEcccEEEEEEcccccEEEEEEEcccEEEEEcHHHcccccccccccHHEEEEcccccEEEcccHHHHHHHHHHHHHHHHccccHcHcccccccccEEEcccccccccccccccHEEEEccccHHHHcccccEcccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHEccccEEcEEEEccccccccEEcccccc
MLSIFICAFLWSilyqdppiartgmcrifgtmqlipmfsldfsavpscfmYIHHCMLvrfmrppsvnssaseddsseeedvdyvcesktvtpvvdnsvnkvalhpsvrssklaARNVQYRSSLNSRAIQKRRSSLRRrrarnpsligsqkasgALVSdltscrkssipsssavsKSKLRSSLQHSSVLSIKEVSSTVDSLMLdldrscccvSILVMESDRCCRVEGANVILEMSHSKEWHLVVKkdgetrysfkaqrimrpssfnrfTHAILWagddnwklefsnrqdwlDFKDLYKecsdrnaqvsvskvipipgvcevlgyedsntvpfcrpdsyisvnVDEVSRALAKrtanydmdsedEEWLKKFNNEFVTEnelhehvsedTFELIVDAFEKayfcspddysnEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLvgssdqpgysflsgspt
MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPSVNSSASEDDSSEEEDVDYVCESKtvtpvvdnsvnkvalhpsvrssklaarnvqyrsslnsraiqkrrsslrrrrarnpsligsqkasgalVSDLTSCRkssipsssavsksklrsslqhssvlsIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVIlemshskewhlvvkKDGETRYSFkaqrimrpssfnRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDrnaqvsvskvipIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRtanydmdsedeEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLvgssdqpgysflsgspt
MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPsvnssaseddsseeedvdyvcesKTVTPVVDNSVNKVALHPSVRSSKLAARNVQYRSSLNSRAIQKrrsslrrrrarNPSLIGSQKASGALVSDLTSCRkssipsssavsksklrssLQHSSVLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVGSSDQPGYSFLSGSPT
**SIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFM*********************YVCESKTVTPVVDN*V************************************************************************************************STVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYD*****EEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVG***************
*LSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPP***********************************************************************************************************************************************CCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKD*******************IPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNN**********HVSEDTFELIVDAFEKAYFCSPD*******AVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVL**************FL*****
MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPP*******************VCESKTVTPVVDNSVNKVALHPSVRSSKLAARNVQYRSSLNSR**************RNPSLIGSQ************************************SVLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVGSSDQPGYSFLSGSPT
MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPSVNS************VDYVCESKTVTPVVDNSVNKVALHPS************************************************************************************************DLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVGSSDQP**********
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SSSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooo
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MLSIFICAFLWSILYQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPSVNSSASEDDSSEEEDVDYVCESKTVTPVVDNSVNKVALHPSVRSSKLAARNVQYRSSLNSRAIQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSKLRSSLQHSSVLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALLVGSSDQPGYSFLSGSPT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query475 2.2.26 [Sep-21-2011]
Q4I5V3 590 Enhancer of polycomb-like yes no 0.261 0.210 0.322 5e-06
>sp|Q4I5V3|EPL1_GIBZE Enhancer of polycomb-like protein 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=EPL1 PE=3 SV=2 Back     alignment and function desciption
 Score = 53.1 bits (126), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 31/155 (20%)

Query: 302 RNAQVSVSKVIPIPGVCEV-LGYEDSNTVPFCRPDSYI--SVNVDEVSRALAKRTANYDM 358
           + A  S  + IP+P   E  + Y+D   VPF +P SYI  S  V+E    L      YDM
Sbjct: 58  KEAGTSNDQEIPVPPPQESDINYDDLYPVPFHKPSSYIRFSQTVEECITCL------YDM 111

Query: 359 DSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAF-----EKAYFCSPDDYSNEEAAV 413
            +ED+E+LK++N++      L    SED FE I++ F     E+  F + D   N  AA 
Sbjct: 112 TTEDDEFLKQYNSKPPATGVL----SEDDFEHIMEVFEDTAAEQTPFAAVD---NTVAAY 164

Query: 414 NLCL----ELGQK------EVVLAVYNHWKQKRKQ 438
           ++ L     L Q       +    VY +WK +R++
Sbjct: 165 DMMLPGLTHLNQSVSTDVLQHAKPVYEYWKSRRQE 199




Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair. Involved in gene silencing by neighboring heterochromatin, blockage of the silencing spreading along the chromosome, and required for cell cycle progression through G2/M.
Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
255582452 781 conserved hypothetical protein [Ricinus 0.951 0.578 0.568 1e-135
296090424 734 unnamed protein product [Vitis vinifera] 0.928 0.600 0.528 1e-131
225449685 791 PREDICTED: uncharacterized protein LOC10 0.928 0.557 0.528 1e-130
224110218443 predicted protein [Populus trichocarpa] 0.863 0.925 0.551 1e-130
224097668448 predicted protein [Populus trichocarpa] 0.907 0.962 0.528 1e-127
356502924 726 PREDICTED: uncharacterized protein LOC10 0.922 0.603 0.477 1e-115
449446275 819 PREDICTED: uncharacterized protein LOC10 0.905 0.525 0.492 1e-114
449519555 819 PREDICTED: uncharacterized LOC101207239 0.905 0.525 0.489 1e-113
297810551 766 hypothetical protein ARALYDRAFT_908352 [ 0.894 0.554 0.479 7e-95
15238266 766 Enhancer of polycomb-like transcription 0.892 0.553 0.481 2e-94
>gi|255582452|ref|XP_002532013.1| conserved hypothetical protein [Ricinus communis] gi|223528325|gb|EEF30368.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/461 (56%), Positives = 330/461 (71%), Gaps = 9/461 (1%)

Query: 7   CAFLWSIL--YQDPPIARTGMCRIFGTMQLIPMFSLDFSAVPSCF--MYIHHCMLVRFMR 62
           CAF    L   QD    R G+C+IFG M  +P+FSLDFSAVP CF  M++     V+ + 
Sbjct: 215 CAFASDGLRFLQDTTANRNGICKIFGGMSTVPIFSLDFSAVPFCFLCMHLRLAFRVKCLS 274

Query: 63  PPSVNSSASEDDSSE---EEDVDYVCE-SKTVTPVV-DNSVNKVALHPSVRSSKLAARNV 117
              VN+S  ED S E   E + D+ C   +T T ++ DNS  KV+LHPS+ +SKLA R+ 
Sbjct: 275 FEPVNNSLDEDSSQEVISESEEDHSCGLVRTDTFLLTDNSGGKVSLHPSLIASKLAGRHS 334

Query: 118 QYRSSLNSRAIQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSK 177
           QYR+ LNSR IQKRRS+ RRRRARNPS +G  KA+GALVSDL S RK+ IP S+ VSK K
Sbjct: 335 QYRNVLNSRGIQKRRSAFRRRRARNPSGVGIHKANGALVSDLISSRKNGIPFSTVVSKDK 394

Query: 178 LRSSLQHSSVLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSK 237
           LR SL+ +   ++KEV+ T       +D S C  ++LV+ESDRC R+ GA V LE+S  K
Sbjct: 395 LRRSLRLTPAANLKEVNPTAVQTSRVMDSSSCSANLLVIESDRCYRMVGATVALEISDLK 454

Query: 238 EWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYK 297
           EW LVVKKDG TR +  AQ+ MRP S NR TH ++W GDD+WKLEF NRQDWL FKDLYK
Sbjct: 455 EWVLVVKKDGLTRCTHLAQKSMRPCSSNRITHDVIWTGDDSWKLEFPNRQDWLIFKDLYK 514

Query: 298 ECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYD 357
           EC DRN    +SK IP+PGV EVLGYEDS+++PF R D+YIS N DEV RAL KRTANYD
Sbjct: 515 ECYDRNVPAPISKAIPVPGVREVLGYEDSSSLPFSRQDAYISFNNDEVVRALTKRTANYD 574

Query: 358 MDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCL 417
           MD EDEEWLKKFN+EF  E+E  EH+SE+ FEL++D  E+A++ SPDD+ +  AAVN C+
Sbjct: 575 MDCEDEEWLKKFNSEFFVESEEQEHLSEEKFELMIDTLERAFYSSPDDFVDGRAAVNFCI 634

Query: 418 ELGQKEVVLAVYNHWKQKRKQKRAALLRVFQAHGVVLAALL 458
           +LG++EVV AVY +W +K+KQ+R+ALLRVFQ H    A+L+
Sbjct: 635 DLGRREVVEAVYGYWMKKQKQRRSALLRVFQLHQGKKASLI 675




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090424|emb|CBI40243.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225449685|ref|XP_002265036.1| PREDICTED: uncharacterized protein LOC100266152 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224110218|ref|XP_002315450.1| predicted protein [Populus trichocarpa] gi|222864490|gb|EEF01621.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224097668|ref|XP_002311034.1| predicted protein [Populus trichocarpa] gi|222850854|gb|EEE88401.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356502924|ref|XP_003520264.1| PREDICTED: uncharacterized protein LOC100789136 [Glycine max] Back     alignment and taxonomy information
>gi|449446275|ref|XP_004140897.1| PREDICTED: uncharacterized protein LOC101207239 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449519555|ref|XP_004166800.1| PREDICTED: uncharacterized LOC101207239 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297810551|ref|XP_002873159.1| hypothetical protein ARALYDRAFT_908352 [Arabidopsis lyrata subsp. lyrata] gi|297318996|gb|EFH49418.1| hypothetical protein ARALYDRAFT_908352 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15238266|ref|NP_196087.1| Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana] gi|7413529|emb|CAB86009.1| putative protein [Arabidopsis thaliana] gi|332003387|gb|AED90770.1| Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
TAIR|locus:2180218766 AT5G04670 "AT5G04670" [Arabido 0.92 0.570 0.430 6.9e-86
TAIR|locus:2125682 1540 AT4G32620 [Arabidopsis thalian 0.532 0.164 0.361 4.8e-37
DICTYBASE|DDB_G0283859 1678 DDB_G0283859 "BRD group protei 0.145 0.041 0.402 0.00013
ZFIN|ZDB-GENE-081104-468 1222 brpf3 "bromodomain and PHD fin 0.204 0.079 0.310 0.00071
UNIPROTKB|G4MNE5 578 MGG_06932 "Uncharacterized pro 0.275 0.226 0.277 0.00098
TAIR|locus:2180218 AT5G04670 "AT5G04670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
 Identities = 193/448 (43%), Positives = 253/448 (56%)

Query:    19 PIARTGMCRIFGTMQLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPXXXXXXXXXXXXXX 78
             P++  G+C+ FG M  +P+FS DF+ +P  FM +H  + VR + P               
Sbjct:   218 PLSSRGVCKFFGAMSCLPLFSADFAVIPRWFMDMHFTLFVRVL-PRSFFFVEKSLYLLNN 276

Query:    79 XXXXXXXXXKTVTPVVDNSVNKVA--LHPSVRSSKLAARNVQYRSSLNSRAIQKXXXXXX 136
                      +   P      N V   LHPSVR+SKL   N QYR +L S + QK      
Sbjct:   277 PIEESDSESELALPEPCTPRNGVVVGLHPSVRASKLTGGNAQYRGNLGSHSFQKRRSSLR 336

Query:   137 XXXXXNPSLIGSQKASGALVSDLTSCRXXXXXXXXXXXXXXXXXXLQHSSVLSIKEVSST 196
                  N S    +  +G  V D++  R                  L +SS +S       
Sbjct:   337 RRRARNLSHNAHKLNNGTPVFDISGSRKNRTAAVSSKKLRSSV--LSNSSPVSNGISIIP 394

Query:   197 VDSLMLDLDRSCCCVSILVMESDRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQ 256
             +     +LD  CC  +IL++ SDRC R EG +V+LE S SKEW LV+KKDG  RYS  AQ
Sbjct:   395 MTKTKEELDSICCSANILMIHSDRCTREEGFSVMLEASSSKEWFLVIKKDGAIRYSHMAQ 454

Query:   257 RIMRPSSFNRFTHAILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPG 316
             R MRP S NR THA +W G DNWKLEF +RQDWL FKD+YKEC +RN      KVIPIPG
Sbjct:   455 RTMRPFSSNRITHATVWMGGDNWKLEFCDRQDWLGFKDIYKECYERNLLEQSVKVIPIPG 514

Query:   317 VCEVLGYED--SNTVPFCRPD-SYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEF 373
             V EV GY +   N   F RP  SYISVN DEVSRA+A+  A YDMDSEDEEWL++ N + 
Sbjct:   515 VREVCGYAEYIDNFPSFSRPPVSYISVNEDEVSRAMARSIALYDMDSEDEEWLERQNQKM 574

Query:   374 VTE-NELHEHVSEDTFELIVDAFEKAYFCSP-DDYSNEEAA-VNLCLELGQKEVVLAVYN 430
             + E ++ +  +  + FEL++D FEK +F SP DD  +E+AA +     LG++EVV AV++
Sbjct:   575 LNEEDDQYLQLQREAFELMIDGFEKYHFHSPADDLLDEKAATIGSISYLGRQEVVEAVHD 634

Query:   431 HWKQKRKQKRAALLRVFQAHGVVLAALL 458
             +W +KRKQ++A LLR+FQ H V    LL
Sbjct:   635 YWLKKRKQRKAPLLRIFQGHQVKKTQLL 662




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2125682 AT4G32620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283859 DDB_G0283859 "BRD group protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081104-468 brpf3 "bromodomain and PHD finger containing, 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G4MNE5 MGG_06932 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
grail3.0106015501
hypothetical protein (443 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
pfam10513145 pfam10513, EPL1, Enhancer of polycomb-like 2e-25
COG5141 669 COG5141, COG5141, PHD zinc finger-containing prote 0.001
>gnl|CDD|220792 pfam10513, EPL1, Enhancer of polycomb-like Back     alignment and domain information
 Score =  101 bits (253), Expect = 2e-25
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 253 FKAQRIMRPSSFNRFTHAILWAGDDNWKLEF-SNRQDWLDFKDLYK-ECSDRNAQVSVSK 310
           F+ +R+      +      ++  +D   LE  ++ +       + K E  +++ QV +S 
Sbjct: 1   FRPRRL------SIKKPLPVFREEDLPDLEKSADIEVPQIPTGVEKEEEWEKHLQVPISA 54

Query: 311 -------VIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDE 363
                   IP P   E+  Y+      F RP SYI  +   V    +     YDMD EDE
Sbjct: 55  AQVAKKLYIPTPEAREIEDYDKPYAPKFKRPKSYIRFSEKSVEELDS--GVEYDMDEEDE 112

Query: 364 EWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKA 398
            WL++ N +   + E    +SED FE ++D  EK 
Sbjct: 113 AWLEELNEKR--KEEGLAPLSEDDFEKLMDRLEKE 145


This is a family of EPL1 (Enhancer of polycomb-like) proteins. The EPL1 protein is a member of a histone acetyltransferase complex which is involved in transcriptional activation of selected genes. Length = 145

>gnl|CDD|227470 COG5141, COG5141, PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 475
PF10513160 EPL1: Enhancer of polycomb-like; InterPro: IPR0195 99.84
KOG2261716 consensus Polycomb enhancer protein, EPC [Transcri 99.12
KOG0954 893 consensus PHD finger protein [General function pre 98.96
KOG2261 716 consensus Polycomb enhancer protein, EPC [Transcri 98.64
KOG0955 1051 consensus PHD finger protein BR140/LIN-49 [General 98.37
COG5141 669 PHD zinc finger-containing protein [General functi 96.81
>PF10513 EPL1: Enhancer of polycomb-like; InterPro: IPR019542 This domain is found at the N-terminal of EPL1 (Enhancer of polycomb-like) proteins Back     alignment and domain information
Probab=99.84  E-value=2e-21  Score=177.40  Aligned_cols=142  Identities=31%  Similarity=0.386  Sum_probs=102.7

Q ss_pred             ceEEEEE--EecccccchhccccccccCCCccccc--eeeecCCCCcccccCCccchhhhhhhHHHhhhcCCCCC-----
Q 011920          237 KEWHLVV--KKDGETRYSFKAQRIMRPSSFNRFTH--AILWAGDDNWKLEFSNRQDWLDFKDLYKECSDRNAQVS-----  307 (475)
Q Consensus       237 ~~~ri~I--kL~~~t~~~~kAq~~ir~~~SNr~th--~~~w~~~~~wklEfpd~~~~~~fK~~~eEe~Ernlqaa-----  307 (475)
                      |.++|.|  +|.++...++... +..++++|+.+.  ...-...+.-.+              .+.++++|+|++     
T Consensus         2 R~~~ld~~~~l~I~~~~d~~~~-~~~~~~~~~~~~~~~~~~gv~~~~~~--------------~~~e~e~~~q~~~~~~~   66 (160)
T PF10513_consen    2 RPRRLDIKKPLPIFREEDLDDL-DESEDSSNKNQAVPQSPTGVEKEEKL--------------SKQEWEKHLQKPISASQ   66 (160)
T ss_pred             CCCCCCCCCCeeEEechhcccc-cccccccccccccccccCCccchhhc--------------cccccccccccccchhh
Confidence            3456777  8888887777777 677777777652  111111111000              223567777765     


Q ss_pred             --------CCCCCCCCeeeEecCccCCCCCCCCCCCccEEeehhhhhHhhhCCCcccCCChhhHHHHHHhhhhhcccccC
Q 011920          308 --------VSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENEL  379 (475)
Q Consensus       308 --------s~~~IPtP~Vr~V~~Yd~~Y~~~F~rP~sYIR~s~eEv~~ald~~~veYDMDeEDEeWL~~~N~kr~~k~dg  379 (475)
                              ....||+|.++.++ |+..|...|.+|.+||||+...+. .++ ..|+||||++|+.||+.+|+++  +..+
T Consensus        67 ~~~~~~~~~~~~IP~P~~~~~~-~~~~~~~~f~~p~~yi~~~~~~~e-~~~-~~veYDmDeeD~~wL~~~N~~r--~~~~  141 (160)
T PF10513_consen   67 NSKSKKKKEKKKIPTPSVRVVD-YEKPYSPPFKRPSSYIRFSEKSVE-DLD-EGVEYDMDEEDEEWLELLNKKR--KSDG  141 (160)
T ss_pred             hhhcccccccccCCCCceEEec-CcCCCCCcccCCccccccccCCHH-Hhc-cCcCCCCchHHHHHHHHHHHHh--hhcC
Confidence                    23559999999878 998899999999999999941111 112 2899999999999999999986  3456


Q ss_pred             CCCCCHHHHHHHHHHHHhc
Q 011920          380 HEHVSEDTFELIVDAFEKA  398 (475)
Q Consensus       380 ~~~LSEd~FE~IMDrFEK~  398 (475)
                      ..+||++.||.|||+|||+
T Consensus       142 ~~~ls~~~FE~~md~lEke  160 (160)
T PF10513_consen  142 LEPLSEEDFEIIMDRLEKE  160 (160)
T ss_pred             CCCCCHHHHHHHHHHHhCC
Confidence            7899999999999999985



The EPL1 protein is a member of a histone acetyltransferase complex which is involved in transcriptional activation of selected genes []. It is also present at the N terminus of Jade family proteins.

>KOG2261 consensus Polycomb enhancer protein, EPC [Transcription] Back     alignment and domain information
>KOG0954 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>KOG2261 consensus Polycomb enhancer protein, EPC [Transcription] Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>COG5141 PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.6 bits (138), Expect = 6e-09
 Identities = 80/518 (15%), Positives = 161/518 (31%), Gaps = 157/518 (30%)

Query: 13  ILYQDPPIARTGMCRIFGTM-----QLIPMFSLDFSAVPSCFMYIHHCMLVRFMRPPSVN 67
           I+     ++ T   R+F T+     +++  F  +        + I++  L+  ++     
Sbjct: 54  IIMSKDAVSGT--LRLFWTLLSKQEEMVQKFVEEV-------LRINYKFLMSPIKTEQRQ 104

Query: 68  SSASEDDSSEEEDVDYVCESKTVTPVVDNSVNKVALHPSVRSSKLAARNVQY-------- 119
            S       E+ D  Y             +V+++  +  +R + L  R  +         
Sbjct: 105 PSMMTRMYIEQRDRLY----NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 120 --RSSL-----NSRAIQKRRS------SLRRRRARNPSLIGSQKASGALVSDLTSC--RK 164
             ++ +      S  +Q +        +L+   +    L   QK    +  + TS     
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 165 SSIPSSSAVSKSKLRSSLQHS----SVLSIKEVSS--TVDSLMLDLDRSCCCVSILVMES 218
           S+I       +++LR  L+       +L +  V +    ++     + SC    IL+   
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF----NLSC---KILLTTR 273

Query: 219 DRCCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRI------MRPSSF-------N 265
            +        V   +S +   H+ +     T    + + +       RP          N
Sbjct: 274 FK-------QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 266 RFTHAILWAGD-------DNWK----------LEFS-NRQDWLDFKDLYKECSDRNAQVS 307
               +I+           DNWK          +E S N  +  +++ ++   S       
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS------- 379

Query: 308 VSKVIP----IP-GVCEVLGYEDSNTVPFCRPDSYISVNVDE-VSRALAKRTAN---YDM 358
              V P    IP  +  ++ ++   +           V V++    +L ++        +
Sbjct: 380 ---VFPPSAHIPTILLSLIWFDVIKSDV--------MVVVNKLHKYSLVEKQPKESTISI 428

Query: 359 DSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFE--KAYF---CSP---DDYSNEE 410
            S   E   K  NE+     LH          IVD +   K +      P   D Y    
Sbjct: 429 PSIYLELKVKLENEY----ALH--------RSIVDHYNIPKTFDSDDLIPPYLDQY---- 472

Query: 411 AAVNLCLELGQKEVVLAVYNHWKQKRKQKRAALLR-VF 447
                   +G        + H K     +R  L R VF
Sbjct: 473 ----FYSHIG--------H-HLKNIEHPERMTLFRMVF 497


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00