Citrus Sinensis ID: 012031


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470--
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHccHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccHHHEEHHHHHHHHHHHHHHHHcccHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
msrvgsecFRWRLLAAAFIGLLVVASVSVsaqsnlkpeatsknkndhvepnivikvsapksrsgykhvwpdikfgWRIVVGTIIGFFGtacgsvggvggggifVPMLNLIvgfdakssaAVSKFSAVVYNLrqrhptldipviDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLgngyqteeckcdpeylsndttpeetrepkksKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKiaskgdegtkWRASQLVFYCACGITAGMVGgllglgggfilgplflelgippqvssaTALFAITFSSSMSVVEYYLLkrfpvpyaLYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEhkeymgfdnicyt
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSnlkpeatsknkndhvepnivikvsapksrsgykhVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGngyqteeckcdpeylsndttpeetrepkkskvSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKiaskgdegtkwRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKriehkeymgfdnicyt
MSRVGSECFRWRLLAAAFIGLLvvasvsvsaqsNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACgsvggvggggIFVPMLNLIVGFDakssaavskfsavvYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITvllivlflvlSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGllvavwaiilalqiaKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVggllglgggfilgplflelgipPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRAsiiiftlsfiifvsALSLGGVGLAKMIKRIEHKEYMGFDNICYT
******ECFRWRLLAAAFIGLLVVASVSV**********************IVIKVS****RSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCD********************VSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICY*
******E*FRWRLLAAAFIGLLVVASVSVSAQS********************IKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVE**********************************************************NIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICY*
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLS**************KVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRK*********KWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
**RVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKP*********HVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAK*******************************TREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query472
255549968483 conserved hypothetical protein [Ricinus 0.985 0.962 0.671 1e-160
225442593481 PREDICTED: uncharacterized protein LOC10 0.989 0.970 0.672 1e-159
224070901426 predicted protein [Populus trichocarpa] 0.862 0.955 0.735 1e-154
337733644353 hypothetical protein [Citrus trifoliata] 0.726 0.971 0.835 1e-151
225430021478 PREDICTED: uncharacterized protein LOC10 0.944 0.933 0.661 1e-148
224092328479 predicted protein [Populus trichocarpa] 0.961 0.947 0.628 1e-146
255551046476 conserved hypothetical protein [Ricinus 0.957 0.949 0.616 1e-144
356556244476 PREDICTED: uncharacterized protein LOC10 0.959 0.951 0.631 1e-143
356547396487 PREDICTED: uncharacterized protein LOC10 0.930 0.901 0.622 1e-142
224059076424 predicted protein [Populus trichocarpa] 0.862 0.959 0.704 1e-141
>gi|255549968|ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis] gi|223544940|gb|EEF46455.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 325/484 (67%), Positives = 389/484 (80%), Gaps = 19/484 (3%)

Query: 1   MSRVGSE--CFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSA 58
           M+ +GSE      R + A+ I  + V S+++ +++  + E +S   ++ VE   +++V  
Sbjct: 1   MAMIGSEWKSLSLRYVKASLICFIGVVSMTIVSEARQQQEGSSDRNSEDVESAFLMRVVN 60

Query: 59  ---PKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDA 115
               K + GY HVWPD+KFGW+IVVG+IIGFFG A GSVGGVGGGGIFVPML LI+GFDA
Sbjct: 61  FLWQKGQLGYTHVWPDMKFGWQIVVGSIIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDA 120

Query: 116 KSSAAVSKF-------SAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVI 168
           KSS A+SK        S V YNL+ RHPTLD+P+IDYDLALLFQP+LVLGISIGVAFNVI
Sbjct: 121 KSSTAISKCMITGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPVLVLGISIGVAFNVI 180

Query: 169 FADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEEC--K 226
           FADWMITVLLI+LF+  ST+AFLKGVETWKKETI K+EAA++L      NG  +EE   K
Sbjct: 181 FADWMITVLLIILFIGTSTKAFLKGVETWKKETIIKKEAARRLA----SNGGASEEVEYK 236

Query: 227 CDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVL 286
             P   +N T PE + EPK+ +VSIIEN+ WKE G+L AVW IILAL+I KNYTTTCSV+
Sbjct: 237 PLPGGPTNGTGPE-SNEPKREEVSIIENVRWKELGILFAVWLIILALEITKNYTTTCSVV 295

Query: 287 YWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGG 346
           YWV NLLQIPVA GVS+Y+AV+LYKG+R+IASKG+ GT WR  QLV YCACG+ AGMVGG
Sbjct: 296 YWVCNLLQIPVALGVSSYQAVSLYKGKRRIASKGEAGTNWRVHQLVLYCACGVLAGMVGG 355

Query: 347 LLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFAL 406
           LLGLGGGFILGPLFLELG+PPQVSSATA FA+TFS+SMSV+EYYLLKRFPVPYALYF A+
Sbjct: 356 LLGLGGGFILGPLFLELGVPPQVSSATATFAMTFSASMSVIEYYLLKRFPVPYALYFVAV 415

Query: 407 SIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGF 466
           S IAAFVGQHV+++LI ILGRAS+IIF LSF IFVSA+SLGGVG+A MI++IE+ EYMGF
Sbjct: 416 STIAAFVGQHVVRRLISILGRASLIIFILSFTIFVSAISLGGVGIANMIEKIENHEYMGF 475

Query: 467 DNIC 470
           DNIC
Sbjct: 476 DNIC 479




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442593|ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera] gi|297743252|emb|CBI36119.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224070901|ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|337733644|gb|AEI72271.1| hypothetical protein [Citrus trifoliata] Back     alignment and taxonomy information
>gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356556244|ref|XP_003546436.1| PREDICTED: uncharacterized protein LOC100816528 [Glycine max] Back     alignment and taxonomy information
>gi|356547396|ref|XP_003542098.1| PREDICTED: uncharacterized protein LOC100789733 [Glycine max] Back     alignment and taxonomy information
>gi|224059076|ref|XP_002299704.1| predicted protein [Populus trichocarpa] gi|222846962|gb|EEE84509.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query472
TAIR|locus:504956017476 AT2G25737 [Arabidopsis thalian 0.847 0.840 0.514 1.6e-102
TAIR|locus:2040605459 AT2G36630 [Arabidopsis thalian 0.847 0.871 0.386 2.8e-73
TAIR|locus:2127343449 AT4G21250 "AT4G21250" [Arabido 0.739 0.777 0.243 6.4e-22
TAIR|locus:2195773458 AT1G61740 [Arabidopsis thalian 0.815 0.840 0.207 1.7e-15
TAIR|locus:2200061367 AT1G11540 "AT1G11540" [Arabido 0.396 0.509 0.248 2.2e-15
DICTYBASE|DDB_G0269644549 DDB_G0269644 [Dictyostelium di 0.819 0.704 0.202 4.6e-15
TAIR|locus:2127348393 AT4G21260 "AT4G21260" [Arabido 0.137 0.165 0.369 2.3e-11
TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
 Identities = 213/414 (51%), Positives = 254/414 (61%)

Query:    64 GYKHVWPDIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXXXX- 122
             GY+HVWP+ +F W+IV+GT++GFFG A           IFVPML+LI+GFD         
Sbjct:    66 GYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISK 125

Query:   123 ------XXXXXXYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITX 176
                         YNLR RHPTLD+P+IDYDLALL QP+L+LGISIGVAFNVIF DW++T 
Sbjct:   126 CMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTV 185

Query:   177 XXXXXXXXXSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDT 236
                      ST+AFLKG ETW KETI K+EAAK+LE     NG    E +  P   +  T
Sbjct:   186 LLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLE----SNGVSGTEVEYVPLPAAPST 241

Query:   237 TPEETREPKKSKVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTTCSVLYWVLNLLQIP 296
              P      KK +VSIIEN+YWKE G               K     CSV YWV+NLLQIP
Sbjct:   242 NPGNK---KKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIP 298

Query:   297 VAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVXXXXXXXXXXXX 356
             VA GVS YEAVALY+GRR IASKG   + +   QLV YC  GI AG+V            
Sbjct:   299 VAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIM 358

Query:   357 XXXXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQH 416
                       PQVSSATA FA+TFSSSMSVVEYYLLKRFPVPYALY   ++ IAA+VGQH
Sbjct:   359 GPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQH 418

Query:   417 VLKKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGFDNIC 470
             V+++LI  +GRA              A+SLGGVG+  MI +I+  EYMGF+N+C
Sbjct:   419 VVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLC 472




GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query472
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 2e-10
COG0730 258 COG0730, COG0730, Predicted permeases [General fun 1e-08
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 3e-08
COG0730258 COG0730, COG0730, Predicted permeases [General fun 1e-06
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 2e-04
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 0.001
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 27/108 (25%), Positives = 44/108 (40%)

Query: 334 YCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLK 393
               G+ AG + GL G GGG I  PL L L  PP V+  T+L A+  +S    + +    
Sbjct: 1   LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60

Query: 394 RFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFV 441
                  L      ++ A +G  +L  L   + +    +  L   + +
Sbjct: 61  NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108


This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 472
PRK10621266 hypothetical protein; Provisional 99.95
COG0730258 Predicted permeases [General function prediction o 99.95
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.93
PRK10621 266 hypothetical protein; Provisional 99.31
COG0730 258 Predicted permeases [General function prediction o 99.24
PF01925 240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 98.95
PF04018257 DUF368: Domain of unknown function (DUF368); Inter 80.35
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
Probab=99.95  E-value=1.4e-26  Score=229.53  Aligned_cols=226  Identities=19%  Similarity=0.239  Sum_probs=186.7

Q ss_pred             HHHHHHHHHHHHHHHhhccccchhhhHHHHHHHHhCCChhhHhHHHHHH-------HHHHHHHhhCCCCCCCccchHHHH
Q 012031           77 RIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKFS-------AVVYNLRQRHPTLDIPVIDYDLAL  149 (472)
Q Consensus        77 ~~l~~~~iG~l~g~i~~~~GiGGG~i~vP~L~~~~g~~~~~Av~ts~~s-------~~~~~~~~~~~~~~~~~Id~~l~~  149 (472)
                      ..++.+++|+++|+++++.| |||.+.+|+|.. +|+||++|++||++.       +...+.+++       .+||+.+.
T Consensus        11 ~~~~l~~~g~~aG~l~gl~G-GGg~i~vP~L~~-~g~~~~~Av~tsl~~~~~~~~~~~~~~~~~~-------~v~~~~~~   81 (266)
T PRK10621         11 LLGVLFFVAMLAGFIDSIAG-GGGLLTIPALLA-AGMSPAQALATNKLQACGGSFSASLYFIRRK-------VVNLADQK   81 (266)
T ss_pred             HHHHHHHHHHHHHHHhhhcc-ccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCHHHHH
Confidence            45667778999999999999 999999999974 799999999999871       233333444       59999999


Q ss_pred             HHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCccccCCC
Q 012031          150 LFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDP  229 (472)
Q Consensus       150 ~~~~~~llG~~iGa~l~~~lp~~~l~~ll~ilLl~~~~~~~~k~~~~~kke~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  229 (472)
                      .+.+++++|+.+|+++..++|++.++.++++++++.+.+++.+.    +++   +++                       
T Consensus        82 ~l~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ll~~~~~~l~~~----~~~---~~~-----------------------  131 (266)
T PRK10621         82 LNIAMTFVGSMSGALLVQYVQADILRQILPILVIGIGLYFLLMP----KLG---EED-----------------------  131 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC----ccc---ccc-----------------------
Confidence            99999999999999999999999999999999998888775441    000   000                       


Q ss_pred             CCCCCCCCCccccCccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHhhhhhhhhHHHHHHHHHH
Q 012031          230 EYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVAL  309 (472)
Q Consensus       230 ~~~~l~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~v~~~~l~~~i~~~~~~~cs~~yWi~~~l~~pv~~~~~~~~~~~l  309 (472)
                        +             .++..   +                                                       
T Consensus       132 --~-------------~~~~~---~-------------------------------------------------------  138 (266)
T PRK10621        132 --R-------------QRRLY---G-------------------------------------------------------  138 (266)
T ss_pred             --c-------------ccccc---c-------------------------------------------------------
Confidence              0             00000   0                                                       


Q ss_pred             HhhhhhhccCCCCCcccchhhHHHHHHHHHHHHHHHhhhcccchhhHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHHH
Q 012031          310 YKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLF-LELGIPPQVSSATALFAITFSSSMSVVE  388 (472)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~G~lsGl~GiGGG~i~vP~l-l~~gl~~~~A~ATs~~~~~~~s~~s~~~  388 (472)
                                           .......|+++|+++|++|+|||.+++|.+ ..++.|++++++|+.+..++++..+...
T Consensus       139 ---------------------~~~~~~~G~~~G~lsG~~G~GgG~~~v~~l~~~~~~~~~~a~~ts~~~~~~~~~~~~~~  197 (266)
T PRK10621        139 ---------------------LPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAKVLNATSNIGGLLL  197 (266)
T ss_pred             ---------------------hHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 001234688999999999999999999877 5789999999999999999999999999


Q ss_pred             HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 012031          389 YYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTL  435 (472)
Q Consensus       389 ~~~~G~i~~~~~l~l~~ga~iGa~iG~~l~~~i~~~~~r~~lii~il  435 (472)
                      |...|.+||..++.+.+++++|+++|+++.+|++++.+|+.+..+++
T Consensus       198 ~~~~G~v~~~~~l~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~ll~  244 (266)
T PRK10621        198 FILGGKVIWATGFVMLVGQFLGARLGARLVLSKGQKLIRPMIVIVSA  244 (266)
T ss_pred             HHhCCeehHHHHHHHHHHHHHHHHHHHHHHHHcCchHhHHHHHHHHH
Confidence            99999999999999999999999999999999999999998776643



>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00