Citrus Sinensis ID: 012690
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 458 | ||||||
| 255554903 | 433 | conserved hypothetical protein [Ricinus | 0.914 | 0.967 | 0.75 | 0.0 | |
| 302144145 | 456 | unnamed protein product [Vitis vinifera] | 0.943 | 0.947 | 0.709 | 1e-175 | |
| 449454732 | 457 | PREDICTED: uncharacterized GPI-anchored | 0.945 | 0.947 | 0.670 | 1e-170 | |
| 225444507 | 478 | PREDICTED: uncharacterized GPI-anchored | 0.901 | 0.864 | 0.702 | 1e-166 | |
| 356555660 | 454 | PREDICTED: uncharacterized GPI-anchored | 0.917 | 0.925 | 0.680 | 1e-165 | |
| 356546412 | 436 | PREDICTED: uncharacterized GPI-anchored | 0.901 | 0.947 | 0.686 | 1e-165 | |
| 224115734 | 440 | predicted protein [Populus trichocarpa] | 0.919 | 0.956 | 0.696 | 1e-161 | |
| 30696637 | 433 | uncharacterized protein [Arabidopsis tha | 0.908 | 0.960 | 0.616 | 1e-151 | |
| 334183569 | 429 | uncharacterized protein [Arabidopsis tha | 0.899 | 0.960 | 0.609 | 1e-149 | |
| 3367523 | 421 | ESTs gb|AA728658 and gb|N95943 come from | 0.895 | 0.973 | 0.612 | 1e-149 |
| >gi|255554903|ref|XP_002518489.1| conserved hypothetical protein [Ricinus communis] gi|223542334|gb|EEF43876.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/424 (75%), Positives = 371/424 (87%), Gaps = 5/424 (1%)
Query: 34 YNLKGHISVNRRVDDLLPEIPPSEAPQPFLPLLAPSPLAPFTNSTVPKLSGHCLLNFTAA 93
Y ++G+ +NRR+DD LPEI P+ PQPFLP+LAPSPL PFTN ++PKLSG C LNFTAA
Sbjct: 14 YFMRGYALINRRLDDFLPEISPNAGPQPFLPILAPSPLQPFTNGSIPKLSGLCTLNFTAA 73
Query: 94 ESLMSMTSIDCHAVFAPLLANVVCCPQLEATILILIGQSSRKTNMLALNGTLAEHCLSDF 153
ESLMSMTSIDC VFAPLLANV+CCPQLEAT+ ILIGQSS++TN+LALNGT+++HCLSD
Sbjct: 74 ESLMSMTSIDCLGVFAPLLANVICCPQLEATLAILIGQSSKETNVLALNGTVSKHCLSDI 133
Query: 154 EQILVGQGAADDLKKICSINASNLTEASCPVKDVNEFESTVDSSKLLAACQKVDPVKECC 213
EQILVGQGAAD++K+ICS++ SNLTE SCPVKDVNEFESTVDSSKLLAAC K+DPV+ECC
Sbjct: 134 EQILVGQGAADNVKRICSVHPSNLTEGSCPVKDVNEFESTVDSSKLLAACMKIDPVRECC 193
Query: 214 DQICQNAILEAATKIAMKASDPLNMEGHNVLSDHSTRINDCKSIVLRWLGSKLDPSRSKE 273
DQ+CQNAI EAAT+IA+KAS+ L++ G + L +HSTRINDCK IVLRWL SKLDPS +KE
Sbjct: 194 DQVCQNAISEAATRIALKASEILSLGGAHGLPEHSTRINDCKHIVLRWLASKLDPSHAKE 253
Query: 274 VLRGLSNCNVNKVCPLSFPSTKHLAKSCGDNISNQSACCNAMESYVSHLQKQSLITNLQA 333
VLRGLSNCNVNKVCPL FP H+AK CG+ +SN + CC+A++SYVSHLQKQ+LITNLQA
Sbjct: 254 VLRGLSNCNVNKVCPLVFPDMSHVAKGCGNGVSNTAGCCSAVDSYVSHLQKQTLITNLQA 313
Query: 334 LDCATLLGTKLQKSSITADVFKLCHISLKDFTLQAAGNQESGCLLPSLPSDATFDKSSGI 393
LDCAT LG +LQKS+IT +V+ LCHISLKDF+L QESGCLLPSLPSDAT DKSSGI
Sbjct: 314 LDCATTLGMELQKSNITRNVYSLCHISLKDFSL-----QESGCLLPSLPSDATLDKSSGI 368
Query: 394 SFICDLNDNIPAPWPSSSRLPTQSCNSSVRIPALPAAASAQSGLYNEALKFYQLFASSAI 453
SFICDLNDNIPAPWPSSS+L SCN +V+IPALPAAASAQSGLYNE + FY LFA+SA
Sbjct: 369 SFICDLNDNIPAPWPSSSQLSASSCNKTVKIPALPAAASAQSGLYNEDVVFYVLFAASAT 428
Query: 454 LLML 457
++ML
Sbjct: 429 MMML 432
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302144145|emb|CBI23250.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449454732|ref|XP_004145108.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Cucumis sativus] gi|449472189|ref|XP_004153520.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Cucumis sativus] gi|449488360|ref|XP_004158012.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225444507|ref|XP_002268681.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356555660|ref|XP_003546148.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356546412|ref|XP_003541620.1| PREDICTED: uncharacterized GPI-anchored protein At1g61900-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224115734|ref|XP_002317109.1| predicted protein [Populus trichocarpa] gi|222860174|gb|EEE97721.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|30696637|ref|NP_176382.2| uncharacterized protein [Arabidopsis thaliana] gi|75150628|sp|Q8GUI4.1|UGPI6_ARATH RecName: Full=Uncharacterized GPI-anchored protein At1g61900; Flags: Precursor gi|27311769|gb|AAO00850.1| Unknown protein [Arabidopsis thaliana] gi|30387511|gb|AAP31921.1| At1g61900 [Arabidopsis thaliana] gi|110740384|dbj|BAF02087.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|332195779|gb|AEE33900.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334183569|ref|NP_001185289.1| uncharacterized protein [Arabidopsis thaliana] gi|332195781|gb|AEE33902.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3367523|gb|AAC28508.1| ESTs gb|AA728658 and gb|N95943 come from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 458 | ||||||
| TAIR|locus:2036788 | 433 | AT1G61900 "AT1G61900" [Arabido | 0.888 | 0.939 | 0.610 | 1.2e-136 | |
| TAIR|locus:2054472 | 480 | AT2G30700 "AT2G30700" [Arabido | 0.829 | 0.791 | 0.417 | 2.9e-80 |
| TAIR|locus:2036788 AT1G61900 "AT1G61900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 254/416 (61%), Positives = 323/416 (77%)
Query: 43 NRRVDDLLPEIPPSEXXXXXXXXXXXXXXXXFTNSTVPKLSGHCLLNFTAAESLMSMTSI 102
+++ ++ LPEI P + NST+PKLSG C LNF+A+ESL+ TS
Sbjct: 26 SQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLIQTTSH 85
Query: 103 DCHAVFAPLLANVVCCPQLEATILILIGQSSRKTNMLALNGTLAEHCLSDFEQILVGQGA 162
+C VFAPLLANV+CCPQL+AT+ I++G++S++T +LALN T ++HCLSD EQILVG+GA
Sbjct: 86 NCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGA 145
Query: 163 ADDLKKICSINASNLTEASCPVKDVNEFESTVDSSKLLAACQKVDPVKECCDQICQNAIL 222
+ L KICSI++SNLT +SCPV +V+EFESTVD++KLL AC+K+DPVKECC++ CQNAIL
Sbjct: 146 SGQLNKICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAIL 205
Query: 223 EAATKIAMKASDPLNMEGHNVLSDHSTRINDCKSIVLRWLGSKLDPSRSKEVLRGLSNCN 282
+AAT I++KAS+ L+D+S RINDCK++V RWL +KLDPSR KE LRGL+NC
Sbjct: 206 DAATNISLKASE--------TLTDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCK 257
Query: 283 VNKVCPLSFPSTKHLAKSCGDNISNQSACCNAMESYVSHLQKQSLITNLQALDCATLLGT 342
+N+VCPL FP KH+ +C + +SNQ+ CC AMESYVSHLQKQ+LITNLQALDCAT LGT
Sbjct: 258 INRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGT 317
Query: 343 KLQKSSITADVFKLCHISLKDFTLQAAGNQESGCLLPSLPSDATFDKSSGISFICDLNDN 402
KLQK +IT ++F +CHISLKDF+LQ GNQESGCLLPSLPSDA FDK +GISF CDLNDN
Sbjct: 318 KLQKLNITKNIFSVCHISLKDFSLQV-GNQESGCLLPSLPSDAIFDKDTGISFTCDLNDN 376
Query: 403 IPAPWPSSSRLPTQSCNSSVRIPALPAAASAQSGLYNEALKFYQLFASSAILLMLI 458
IPAPWPSSS +C VRIPALPAAAS+Q L++E + +F S +L+ML+
Sbjct: 377 IPAPWPSSSLSSASTCKKPVRIPALPAAASSQPRLHDEGVTRLVIFVLSMLLVMLL 432
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| TAIR|locus:2054472 AT2G30700 "AT2G30700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 458 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 54.9 bits (131), Expect = 4e-08
Identities = 66/383 (17%), Positives = 113/383 (29%), Gaps = 102/383 (26%)
Query: 85 HCLLNFTAAESLMSMTSIDCHAVFAP-LLANVVC--CPQLEATIL------ILIGQSSRK 135
H ++F E D +VF + N C + +IL +I
Sbjct: 4 HHHMDFETGE--HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 136 TNMLALNGTL---AEHCLSDFEQILVGQGAADDLKKICSINASNL-TEASCPVKDVNEFE 191
+ L L TL E + F V + + K + S + TE P +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKF----VEEVLRINYKFL----MSPIKTEQRQPSMMTRMYI 113
Query: 192 STVDSSKLLAACQKVDP--V--KECCDQICQNAILEA--ATKIA---MKASDPLNMEGHN 242
D +L Q V + ++ + A+LE A + + S G
Sbjct: 114 EQRD--RLYNDNQVFAKYNVSRLQPYLKL-RQALLELRPAKNVLIDGVLGS------GKT 164
Query: 243 VL-----SDHSTRINDCKSIVLRWL--GSKLDPSRSKEVLRGLSNCNVNKVCPLSFPSTK 295
+ + + I WL + P + VL L L +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIF--WLNLKNCNSP---ETVLEMLQK--------LLYQIDP 211
Query: 296 HLAKSCGDNISNQSACCNAMESYVSHLQKQ-----SLI--------TNLQALD--CATLL 340
+ D+ SN +++++ + L K L+ A + C LL
Sbjct: 212 NWTSRS-DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL 270
Query: 341 GTKLQKSSITADV--FKLCHISLKD----FTLQAAGNQES--------GCLLPSLPSDAT 386
T+ +T + HISL T E C LP +
Sbjct: 271 TTR--FKQVTDFLSAATTTHISLDHHSMTLTP-----DEVKSLLLKYLDCRPQDLPREVL 323
Query: 387 FDKSS--GISFICDLNDNIPAPW 407
++ +S I + + A W
Sbjct: 324 --TTNPRRLSIIAESIRDGLATW 344
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00