Citrus Sinensis ID: 012747


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------
MGKTTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGANDEGSKASNSKGTKRASHELLFINGSSCSSCQNYLLKMWGS
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHccccccccEEccccccccccccHHHHHHHHccccEEEEEEEEcccccccccccccccccccEEEEEEEEcHHHHHHHccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEEEEEEEccHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHccccccHHHHHHHHHHcc
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccEEEEEcccccccccccHHHHHHHcccccccEEEEccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccccHHHccccEEEEEEcHHHHHHHHHcccccccccccEEEEEEEEEEccccccccHHHccccccccHHHHccccEEEEEEEccEEEEccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHccccccccHHHHHHccccccEEccccHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccEEccccccHHHHHHHHHccc
mgkttpckipllfqSKLLCFSLLYLASTLFFALrnslspsqcgfkdppfdpiqtplftyphsygehkyalparrsscsssvlfsDYKVVFKEIQDlcgnssafppvlkymqgnadsfgghfgtkksiayfdhqnnsldlpcgffkkfpisdsdrtamenCHGVVVVSAIFnnhdkirqprglgsktLETVCFFMFVddttlkgleHHHLIyeksnefkiGAWRIVKVSSknlyenpamngvipkylvhrlfpnskfsIWVDAKLQLTADPLLLIHALVVsenvdmaiskhpfFIHTMEEAMATARWKKWRDVNALLMQMETYCenglqpwssnklpypsdvpdsalILRKHGLRSNLFSCLMFseleafnprdQLAFAYVRdnmspklklnMFEEQVFEDIAVEYRHSLkrvgigandegskasnskgtkraSHELLfingsscssCQNYLLKMWGS
mgkttpckipllFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIyeksnefkigAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKrvgigandegskasnskgtKRASHELlfingsscsscQNYLLKMWGS
MGKTTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRsscsssVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGANDEGSKASNSKGTKRASHELLFINGSSCSSCQNYLLKMWGS
******CKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGI*********************LLFINGSSCSSCQNYLLKMW**
**********LLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDP*F*P**TPLFTYPHSYGE**YALPARRSSCSSSVLFSDYKVVFK***********************DSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHS****************************LFINGSSCSSCQNYLLKMWGS
MGKTTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGA***************ASHELLFINGSSCSSCQNYLLKMWGS
******CKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKR**************SKGTKRASHELLFINGSSCSSCQNYLLKMWGS
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGKTTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYPHSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGANDEGSKASNSKGTKRASHELLFINGSSCSSCQNYLLKMWGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query457
224142389450 predicted protein [Populus trichocarpa] 0.975 0.991 0.701 0.0
225444551450 PREDICTED: uncharacterized protein LOC10 0.975 0.991 0.690 0.0
297740691456 unnamed protein product [Vitis vinifera] 0.975 0.978 0.690 0.0
255557313456 conserved hypothetical protein [Ricinus 0.989 0.991 0.701 0.0
356557813458 PREDICTED: uncharacterized protein LOC10 0.991 0.989 0.682 0.0
356510790458 PREDICTED: uncharacterized protein LOC10 0.960 0.958 0.690 1e-180
449434260467 PREDICTED: uncharacterized protein LOC10 0.995 0.974 0.672 1e-179
357447307457 hypothetical protein MTR_2g019450 [Medic 0.984 0.984 0.660 1e-179
449518601467 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.995 0.974 0.670 1e-179
147860064545 hypothetical protein VITISV_037979 [Viti 0.938 0.787 0.664 1e-177
>gi|224142389|ref|XP_002324541.1| predicted protein [Populus trichocarpa] gi|222865975|gb|EEF03106.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/456 (70%), Positives = 376/456 (82%), Gaps = 10/456 (2%)

Query: 1   MGKTTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFTYP 60
           MGK    K PL+FQSKLLC SLLYL +TLF AL  S+ P++C F+  PFDPIQTP F+YP
Sbjct: 1   MGKAKLSK-PLIFQSKLLCISLLYLITTLFLALYTSIYPTKCLFRSSPFDPIQTPFFSYP 59

Query: 61  HSYGEHKYALPARRSSCSSSVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFGGH 120
            SYGEHKY +P  RSSCSS + FSDY +V KEI  LC NSS     L+YM+GN+ +FGG+
Sbjct: 60  SSYGEHKYVIPTHRSSCSSPIYFSDYWMVLKEILQLCQNSSVSSHALRYMKGNSKNFGGN 119

Query: 121 FGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQPR 180
           FGT+K I+YFD  N+S+++PCGFF++FP+SDSDR AME+CHGVVVVSAIFN+HDKIRQP+
Sbjct: 120 FGTQKRISYFDLLNDSVEVPCGFFQRFPVSDSDRMAMESCHGVVVVSAIFNDHDKIRQPK 179

Query: 181 GLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNLYENPAMNG 240
            LGSKTL+ VCFFMFVDD TLKGL+HH +I   S+E+ +G WRI+KVSSK+LY+NPAMNG
Sbjct: 180 SLGSKTLDNVCFFMFVDDITLKGLDHHEVISRNSHEYNVGVWRIIKVSSKDLYDNPAMNG 239

Query: 241 VIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEA 300
           VIPKYLVHRLFPNSKFSIWVDAKLQL  DPL+LIHALVVSE VDMAISKHPFFIHTMEEA
Sbjct: 240 VIPKYLVHRLFPNSKFSIWVDAKLQLMVDPLILIHALVVSEKVDMAISKHPFFIHTMEEA 299

Query: 301 MATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSNLFSC 360
           +ATARWKKW+DV+ L  QMETYCENGLQPW+  K PYPSDVPDSALILR+HGL SNLFSC
Sbjct: 300 LATARWKKWKDVDGLRNQMETYCENGLQPWTPKK-PYPSDVPDSALILRQHGLNSNLFSC 358

Query: 361 LMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGANDEG 420
           L+F+ELEAFNPRDQL FAYVRD M PKLKLNMFE +VFE +A+EYRH+LK+       +G
Sbjct: 359 LVFNELEAFNPRDQLPFAYVRDRMKPKLKLNMFEVEVFEQVALEYRHNLKK-------DG 411

Query: 421 SKASNSKGTKRASHELLFINGSSCSSCQNYLLKMWG 456
           + A     +K  S++ L+IN S CS C NYLL+MWG
Sbjct: 412 TSAGGIPSSKSVSND-LYINSSCCSKCHNYLLEMWG 446




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444551|ref|XP_002269609.1| PREDICTED: uncharacterized protein LOC100246938 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740691|emb|CBI30873.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255557313|ref|XP_002519687.1| conserved hypothetical protein [Ricinus communis] gi|223541104|gb|EEF42660.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356557813|ref|XP_003547205.1| PREDICTED: uncharacterized protein LOC100809755 [Glycine max] Back     alignment and taxonomy information
>gi|356510790|ref|XP_003524117.1| PREDICTED: uncharacterized protein LOC100792354 [Glycine max] Back     alignment and taxonomy information
>gi|449434260|ref|XP_004134914.1| PREDICTED: uncharacterized protein LOC101215259 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357447307|ref|XP_003593929.1| hypothetical protein MTR_2g019450 [Medicago truncatula] gi|355482977|gb|AES64180.1| hypothetical protein MTR_2g019450 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449518601|ref|XP_004166325.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101215259 [Cucumis sativus] Back     alignment and taxonomy information
>gi|147860064|emb|CAN78735.1| hypothetical protein VITISV_037979 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query457
TAIR|locus:2162065462 AT5G46220 [Arabidopsis thalian 0.993 0.982 0.612 5.6e-155
TAIR|locus:2032137581 AT1G28240 [Arabidopsis thalian 0.765 0.602 0.347 3.3e-47
TAIR|locus:2037053540 AT1G53040 [Arabidopsis thalian 0.606 0.512 0.361 2.5e-42
TAIR|locus:2121194499 AT4G38500 [Arabidopsis thalian 0.623 0.571 0.325 1.2e-40
TAIR|locus:2056750460 AT2G02910 [Arabidopsis thalian 0.590 0.586 0.376 1.6e-40
TAIR|locus:2009253735 EMB2756 "EMBRYO DEFECTIVE 2756 0.614 0.382 0.347 3.9e-37
TAIR|locus:2136907711 AT4G09630 [Arabidopsis thalian 0.614 0.395 0.340 9.2e-37
TAIR|locus:2165457463 AT5G42660 [Arabidopsis thalian 0.638 0.630 0.331 2.8e-34
TAIR|locus:2162065 AT5G46220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
 Identities = 284/464 (61%), Positives = 357/464 (76%)

Query:     1 MGK--TTPCKIPLLFQSKLLCFSLLYLASTLFFALRNSLSPSQCGFKDPPFDPIQTPLFT 58
             MGK  TT    PL  +SKLLCFSLLYL ST+F  L  SLS +QC F+  PFDPIQ  LF+
Sbjct:     1 MGKFITTTLSPPLYARSKLLCFSLLYLFSTIFLFLYVSLSRNQCIFRYSPFDPIQAKLFS 60

Query:    59 YPHSYGEHKYALPARRXXXXXXVLFSDYKVVFKEIQDLCGNSSAFPPVLKYMQGNADSFG 118
             YP SYGEHKYALP  R      + FSDY  V KEIQ +   SS     L+Y+ G ++SFG
Sbjct:    61 YPSSYGEHKYALPTHRSSCSSPIFFSDYWTVLKEIQSILSGSSP-KENLRYINGKSESFG 119

Query:   119 GHFGTKKSIAYFDHQNNSLDLPCGFFKKFPISDSDRTAMENCHGVVVVSAIFNNHDKIRQ 178
             G+F T+K  +YF+H N  +++PCGFF+ FP+S+SDR  ME C G+VV SAIFN+HDKIRQ
Sbjct:   120 GNFSTQKRFSYFNHSNIDVEVPCGFFRDFPVSNSDRVEMEKC-GLVVASAIFNDHDKIRQ 178

Query:   179 PRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKS-NEFKIGAWRIVKVS-SKNLYENP 236
             P GLG KTLETVCF+MF+DD TL  L HH++I + + +++++GAWRI+K+S S+NLY NP
Sbjct:   179 PVGLGVKTLETVCFYMFIDDKTLNSLFHHNVILKNNPSDYRVGAWRIIKISKSENLYLNP 238

Query:   237 AMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHT 296
             AMNGVIPKYL+HRLFPNSKFSIWVDAK+QL  DPLLLIH+++V   VDMAISKHPFF++T
Sbjct:   239 AMNGVIPKYLIHRLFPNSKFSIWVDAKIQLMIDPLLLIHSMLVVPEVDMAISKHPFFVNT 298

Query:   297 MEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKLPYPSDVPDSALILRKHGLRSN 356
             MEEAMATARWKKW DV+ L +QMETYCE+GL+PWSS+KLPYP+DVPD+ALILR+HG+RSN
Sbjct:   299 MEEAMATARWKKWGDVDGLRIQMETYCEHGLKPWSSSKLPYPTDVPDTALILRRHGIRSN 358

Query:   357 LFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRHSLKRVGIGA 416
             LFSC MF+ELEAFNPRDQLAFA+VRD+++PK+K+NMFE +VFE + VEYRH+LK++    
Sbjct:   359 LFSCFMFNELEAFNPRDQLAFAFVRDHINPKVKMNMFEVEVFEQVVVEYRHNLKKIESST 418

Query:   417 NDEGSKASNSKGTKRASHELLFINGSSCS----SCQNYLLKMWG 456
              +E  +    +  +       +++  S S    SC+NYL  MWG
Sbjct:   419 YEEQEEEQKQESLRTIQKRRKWLDHESWSLNRSSCKNYLTDMWG 462




GO:0006672 "ceramide metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2032137 AT1G28240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037053 AT1G53040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121194 AT4G38500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056750 AT2G02910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009253 EMB2756 "EMBRYO DEFECTIVE 2756" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136907 AT4G09630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165457 AT5G42660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query457
pfam04765306 pfam04765, DUF616, Protein of unknown function (DU 1e-150
>gnl|CDD|218253 pfam04765, DUF616, Protein of unknown function (DUF616) Back     alignment and domain information
 Score =  429 bits (1106), Expect = e-150
 Identities = 151/312 (48%), Positives = 200/312 (64%), Gaps = 18/312 (5%)

Query: 107 LKYMQGNA-------DSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKK---FPISDSDRTA 156
           L Y++            FGG+   ++  + FDH+   + + CGF K    F IS+SDR  
Sbjct: 2   LTYIEEEEKNKGYGGPLFGGNQSLEERESSFDHKET-MTVHCGFVKPNTGFDISESDRKY 60

Query: 157 MENCHGVVVVSAIFNNHDKIRQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNE 216
           ME C  VVV SAIF ++DKIRQP+G+  ++ + VCF MFVD+ TL  L+    + +    
Sbjct: 61  MEKCR-VVVASAIFGDYDKIRQPKGISKRSKKNVCFVMFVDEETLSTLKSEGHVPDD--N 117

Query: 217 FKIGAWRIVKVSSKNL-YENPAMNGVIPKYLVHRLFPNSKFSIWVDAKLQLTADPLLLIH 275
            ++G WRIV V  KNL Y +P  NG +PKYL+HRLFPN+++SIWVDAKLQL  DPLL++ 
Sbjct: 118 GRVGLWRIVVV--KNLPYTDPRRNGKVPKYLLHRLFPNARYSIWVDAKLQLVVDPLLILE 175

Query: 276 ALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKL 335
             +   N D AISKH F     EEA A  RWKK+ D  ++  QME YC +GL PWS  KL
Sbjct: 176 RFLWRTNSDFAISKHYFRHCVYEEAEANKRWKKYGD-ASIDEQMEFYCSDGLTPWSDPKL 234

Query: 336 PYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEE 395
           P PSDVP+ A+I+R+H   SNLFSCL F+E++ F  RDQL+FAYVRD + PK K+NMF++
Sbjct: 235 PLPSDVPEGAVIVREHTPMSNLFSCLWFNEVDRFTSRDQLSFAYVRDKLRPKFKMNMFKD 294

Query: 396 QVFEDIAVEYRH 407
                + V YRH
Sbjct: 295 CERRSLVVLYRH 306


Family of uncharacterized proteins. Length = 306

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 457
PF04765305 DUF616: Protein of unknown function (DUF616); Inte 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 81.92
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function Back     alignment and domain information
Probab=100.00  E-value=2.1e-111  Score=837.66  Aligned_cols=295  Identities=51%  Similarity=0.842  Sum_probs=284.4

Q ss_pred             ceeeecCC-------CCCCCCCCchhhhhhhhhcccCcccccccccc--CCCCCHhhHHHHhccCcEEEEEEeeCCCCcC
Q 012747          106 VLKYMQGN-------ADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFK--KFPISDSDRTAMENCHGVVVVSAIFNNHDKI  176 (457)
Q Consensus       106 ~l~y~~~~-------~~~FgG~~s~~~R~~sf~~~~~~~~vhCGF~~--~F~i~~~d~~~m~~c~kvVVyTAIFG~YD~L  176 (457)
                      +|+|+.++       .++|||||||+||++||++ .++|+|||||++  ||||+|.|+.+|++|+ |||||||||+||+|
T Consensus         1 nl~y~~~~~~~~~~~~~~f~g~~s~~~R~~sf~~-~~~~~v~Cgf~~~~gf~i~~~d~~~m~~c~-vvV~saIFG~yD~l   78 (305)
T PF04765_consen    1 NLTYIEEENKPESGRGPSFGGNQSLEERESSFDI-QEDMTVHCGFVKNTGFDISESDRRYMEKCR-VVVYSAIFGNYDKL   78 (305)
T ss_pred             CCcccccccccccCCCCCcCCcCCHHHHHHhcCC-CCCceeccccccCCCCCCCHHHHHHHhcCC-EEEEEEecCCCccc
Confidence            35666555       5999999999999999995 688999999999  9999999999999995 99999999999999


Q ss_pred             CCCCCCCCCCCCceeEEEEeeccchhhhccccccccccCcccccceEEEEecCCCc-CCCcccccccceeeccccCCCCC
Q 012747          177 RQPRGLGSKTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVKVSSKNL-YENPAMNGVIPKYLVHRLFPNSK  255 (457)
Q Consensus       177 ~~P~~i~~~s~d~VCF~mFtDe~tl~~l~~~g~~~~~~~~~~~g~WrIV~V~~~nL-y~D~rrngRipKiLpHrLFPny~  255 (457)
                      +||+++++.++++|||+||||+.|+++|+++|.++  ++++++|+||||+|+  ++ |.|+||+||+||+|||+|||||+
T Consensus        79 ~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~--~~~~~ig~WrIv~v~--~lp~~d~rr~~r~~K~lpHrlfp~y~  154 (305)
T PF04765_consen   79 RQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIP--DENKKIGIWRIVVVK--NLPYDDPRRNGRIPKLLPHRLFPNYD  154 (305)
T ss_pred             cCchhhCHHHhcCccEEEEEehhhHHHHHhcCCcc--ccccccCceEEEEec--CCCCcchhhcCcccceeccccCCCCc
Confidence            99999999999999999999999999999999986  788899999999996  78 99999999999999999999999


Q ss_pred             eEEEEeCceeEecCHHHHHHHHHhcCCCcEEEecCCCCCChHHHHHHHHHhhccCChHHHHHHHHHHHHcCCCCCCCCCC
Q 012747          256 FSIWVDAKLQLTADPLLLIHALVVSENVDMAISKHPFFIHTMEEAMATARWKKWRDVNALLMQMETYCENGLQPWSSNKL  335 (457)
Q Consensus       256 ySIWIDgkiqL~~DP~~lIe~~L~r~~~~~AiskHp~R~ciYEEA~ac~r~~Kydd~~~I~~Qm~~Yk~eGlp~~s~~kl  335 (457)
                      |||||||||+|++||++||+++||+++++|||++||.|+||||||+||++++|++ ++.|++||++|+++|||+|+++|+
T Consensus       155 ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~cvyeEa~a~~~~~k~~-~~~I~~Qm~~Y~~eGlp~~s~~k~  233 (305)
T PF04765_consen  155 YSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNCVYEEAEACKRLGKYD-PERIDEQMEFYKQEGLPPWSPAKL  233 (305)
T ss_pred             eEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCcccHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCCccccccc
Confidence            9999999999999999999999999999999999999999999999999999965 699999999999999999999999


Q ss_pred             CCCCCCCcccEEEeccCCcchhhHHHHHHHHhhCCCCCCchHHHHHHhhCCCcccccchhHHHHHHHHhhcc
Q 012747          336 PYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKLKLNMFEEQVFEDIAVEYRH  407 (457)
Q Consensus       336 P~~sgLpE~~vIIR~Ht~~snlfmclWfnEv~rfs~RDQLSF~YVl~k~~~~~~lnmF~~~~~~~~~~~~rH  407 (457)
                      |+.+|||||+||||+|++++|+|||+|||||++||+||||||+||+||+++++++|||++|+|++++++|+|
T Consensus       234 ~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLSF~Yv~wk~~~~~~~~mf~~~~~~~~~~~~~h  305 (305)
T PF04765_consen  234 PLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLSFPYVLWKLGPKFKLNMFKDCERRQLVVLYRH  305 (305)
T ss_pred             ccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccchHHHHHHHhCCcccchhhhHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999



The function of is unknown although a number of the members are thought to be glycosyltransferases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query457
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 64/446 (14%), Positives = 126/446 (28%), Gaps = 140/446 (31%)

Query: 33  LRNSLSPSQCG--FKDPPFDPIQTP--LFTYPHSYGEHKYALPARRSSCSSSVLFSDYKV 88
            ++ LS  +          D +     LF    S  E               VL  +YK 
Sbjct: 42  PKSILSKEEIDHIIMSK--DAVSGTLRLFWTLLSKQEEMVQ------KFVEEVLRINYKF 93

Query: 89  VFKEIQDLCGNSSAFPPVLKYMQGNADSFGGHFGTKKSIAYFDHQNNSLDLPCGFFKKFP 148
           +   I+      S                     T+  I   D   N   +    F K+ 
Sbjct: 94  LMSPIKTEQRQPSM-------------------MTRMYIEQRDRLYNDNQV----FAKYN 130

Query: 149 ISDSD-----RTAMEN--------CHG-------VVVVSAIFNNHDKIRQPRG-----LG 183
           +S        R A+            G        V +    +   + +         L 
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 184 S--------KTLETVCFFMFVDDTTLKGLEHHHLIYEKSNEFKIGAWRIVK--------- 226
           +        + L+ + + +  D       +H   I  + +  +    R++K         
Sbjct: 191 NCNSPETVLEMLQKLLYQI--DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 227 ----VSSKNLYENPAMNG-----VIPKY--LVHRLFPNSKFSIWVDAKLQ-LTADPLLLI 274
               V +   +   A N      +  ++  +   L   +   I +D     LT D +  +
Sbjct: 249 VLLNVQNAKAWN--AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 275 HALVVSENVDM----AISKHPFFIHTMEEAM--ATARWKKWRDVNALLMQMETYCENGLQ 328
               +           ++ +P  +  + E++    A W  W+ VN    ++ T  E+ L 
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN--CDKLTTIIESSL- 363

Query: 329 PWSSNKLPYPSDVPDSALILRKHGLRSNLFSCLMFSELEAFNPRDQLAFAYVRDNMSPKL 388
               N L  P++        RK           MF  L  F P           ++   L
Sbjct: 364 ----NVLE-PAE-------YRK-----------MFDRLSVF-PPS------A--HIPTIL 391

Query: 389 KLNMF----EEQVFEDIAVE-YRHSL 409
            L++      +     +  + +++SL
Sbjct: 392 -LSLIWFDVIKSDVMVVVNKLHKYSL 416


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00