Citrus Sinensis ID: 012821

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
Protein Sequence
MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNNSNYKNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEccccccccccccccccccccEEEEEEEccccccccEEEEEEcccccccccccccHHHHEEEEEEcccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccEEHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mtscysrltagsaashsllqspkpspkapvscylrdhhanqrlpttllfrsskrnyyhnnsnyknnNVIYIVASAAaaersdgheaavgdlvdkrksgertvEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAgivtdemlsmpkapFVAVGLLEALAAATGMAAGAilsgasipilSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVasgsnpghslkgaGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPflsklwgipfsqlpiylRDGAACFLnlgtlssgcdgapllPLLFVLVNMGFNISLLHLLKISSAIVSSLAstfsvpisvyvftlplpylgvasslptgFVAGAVILVMGLLIyswtptaspssacsssan
Flexible Loop (DISEMBL)
MTSCYSRltagsaashsllqspkpsPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYhnnsnyknnnVIYIVASAAAAERSDGHEAAVgdlvdkrksgertvefnvisksndrrvEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWtptaspssacsssan
Low Complexity Region (SEG)
MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFrsskrnyyhnnsnyknnnVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVavgllealaaatgmaagaILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYswtptaspssacsssaN
Disordered region (IsUnstruct)
*******************************CYLRDHHANQRLPTTLLFRSSKRNYYHNNSNYKNNNVIYIVASAAA************************VEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT**************
Disordered Region (DISOPRED)
**********************************************************************************************************ISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV***************FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIY*****************
Disordered Region (DISEMBL)
****************************PVSCYLRDHHANQRLPTTLLFRSSKRNYYHNNSNYKNNNVIYIVASAA*********AAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTP*************
Disordered Region (DISPRO)
*****SR****SAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRN****NSNYKNNNVIYIVASAAA**********************RTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT**************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNNSNYKNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	456	2.2.26 [Sep-21-2011]
Q9GSB0	473	Crt homolog 1 OS=Dictyost	yes	no	0.695	0.670	0.274	9e-23
Q55C66	478	Crt homolog 3 OS=Dictyost	no	no	0.638	0.608	0.261	3e-20
Q550A6	484	Crt homolog 2 OS=Dictyost	no	no	0.734	0.692	0.261	5e-20
Q9GSD8	425	Putative chloroquine resi	N/A	no	0.646	0.694	0.218	1e-06
Q7REK3	424	Putative chloroquine resi	N/A	no	0.662	0.712	0.213	2e-05
Q9N623	424	Chloroquine resistance tr	yes	no	0.616	0.662	0.215	4e-05
Q8IBZ9	424	Putative chloroquine resi	yes	no	0.616	0.662	0.215	4e-05
Q9GSD3	424	Putative chloroquine resi	N/A	no	0.530	0.570	0.217	0.0001
Q7Z0V9	424	Putative chloroquine resi	N/A	no	0.666	0.716	0.199	0.0001

>sp|Q9GSB0|CRTP1_DICDI Crt homolog 1 OS=Dictyostelium discoideum GN=crtp1 PE=2 SV=1

 Score =  108 bits (270), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 169/354 (47%), Gaps = 37/354 (10%)

Query: 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSIL-YLRYHA 171
             + I+I   + V  GV N VL K  +    +Y FFL+QL  FGYV ++ ++  Y  +  
Sbjct: 48  ETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGAVTAYKIFFT 107

Query: 172 GIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFL 231
             +  E    P   F  +G L+A+     +  G   SG    +L+Q  + + ++ S IFL
Sbjct: 108 KDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFL 167

Query: 232 GRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEV 291
             RY + QL G  LV IG ++T    S  G S  G   FW+   ++S +  A   V K++
Sbjct: 168 KERYSLIQLGGA-LVIIGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPGALSNVYKDI 226

Query: 292 IFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPIYLRDGAA 348
            F   A      +D++ +  + S +Q++F   L P   +L     + F Q+  ++++GA 
Sbjct: 227 GFQAVAD-----MDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQILPFMKEGAE 281

Query: 349 CFLNLGTL-------------------------SSGCDGAPLLPLLFVLVNMGFNISLLH 383
           C   + ++                            C  A ++ +L++ +N+ +NI +L 
Sbjct: 282 CLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIILYMTINIIYNIFILL 341

Query: 384 LLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF-VAGAVILVMGL 436
           +LK + A V S+A+T  +P++  VF++    +G A S  +G  VAG VI+++GL
Sbjct: 342 VLKHAGATVYSIANTLRLPLTNIVFSIHF-IMGSAVSPFSGLSVAGLVIILVGL 394

May regulate endogenous transporter.
Dictyostelium discoideum (taxid: 44689)

>sp|Q55C66|CRTP3_DICDI Crt homolog 3 OS=Dictyostelium discoideum GN=crtp3 PE=3 SV=1

 Score =  100 bits (248), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 160/325 (49%), Gaps = 34/325 (10%)

Query: 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYF-SILYLRYHA 171
             + I+I   + ++ GV N VL K  ++   +Y FFL+Q+  +GY+ ++  ++ Y  Y  
Sbjct: 51  ETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNYGYLPIFLVAMWYKMYCT 110

Query: 172 GIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFL 231
             V  E  + P+  FV +GLL+A+     +  G   SG    +L+Q  + + ++ S IFL
Sbjct: 111 SDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFL 170

Query: 232 GRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEV 291
             RY + QL G  ++  GVI+++   S  G S  G  +F++   ++S +  A   V K++
Sbjct: 171 RERYSLFQLGGAAVILGGVIVSLIP-SLVGGSSGGNILFYNFFYLISVIPGALSNVYKDI 229

Query: 292 IFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPIYLRDGAA 348
            F    Q +   +D++ +  +   +Q+LF  +L P   +L     I F+++   +RDGA 
Sbjct: 230 AF----QSID--MDVWYLQFWDCLYQSLFGSILFPVNNWLPPPATIKFTEIIPSMRDGAL 283

Query: 349 CF-----------------------LNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLL 385
           C                        +N   +   C    ++ L+++ VN+ +NI +L +L
Sbjct: 284 CLGGKNTILPIFNGTTSTLAFGSCGINDNFVCDDCHNTWIIVLIYMTVNIAYNIFILLVL 343

Query: 386 KISSAIVSSLASTFSVPISVYVFTL 410
           K + A V S+A+T  +P++   F++
Sbjct: 344 KHAGATVYSIANTVILPLTNIFFSI 368

May regulate endogenous transporter.

Dictyostelium discoideum (taxid: 44689)

>sp|Q550A6|CRTP2_DICDI Crt homolog 2 OS=Dictyostelium discoideum GN=crtp2 PE=3 SV=1

 Score = 99.4 bits (246), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 184/375 (49%), Gaps = 40/375 (10%)

Query: 92  VDKRKSGERTVEF--NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFL 149
           V K+   +R  ++  N ISK   +   +++   + +L GV N +L K  +    +Y FFL
Sbjct: 36  VKKQSIIQRFKDYLKNSISK---QTATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFL 92

Query: 150 AQLATFGYVAVYFSI-LYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208
            QL  +GYV ++ +I LY       +  +  S P+  FV +G L+A+     +  G   +
Sbjct: 93  NQLTNYGYVPIFGAIVLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTT 152

Query: 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAG 268
           G    +L+Q+ + + +LLS IFL  RY + QL G  ++  GV++++      G++  G  
Sbjct: 153 GPLQQLLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNT-SGNM 211

Query: 269 IFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP-- 326
           +F++   ++S +  A   V K + F          +D++ +  + + +Q+L   +L P  
Sbjct: 212 LFYNFFYLISMIPYAFSNVYKAIGFSTVED-----MDVWYLQYFDALYQSLVGTVLFPIN 266

Query: 327 -FLSKLWGIPFSQLPIYLRDGAACFLNLGTL--------------------SSGCD---G 362
            +L     + F+Q+   L+ G  C   + TL                    + GCD   G
Sbjct: 267 NWLPPPSDMKFNQVIPQLKAGGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHG 326

Query: 363 APLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLP 422
           A ++ L+++ VN+ +N+ +L +LK + A V S+A+T  +P++   F+     +G  S+  
Sbjct: 327 AWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFKF-IMGSDSNPF 385

Query: 423 TGF-VAGAVILVMGL 436
           +G  VAG  I+++GL
Sbjct: 386 SGLSVAGLCIILLGL 400

May regulate endogenous transporter.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9GSD8|CRT_PLABE Putative chloroquine resistance transporter OS=Plasmodium berghei GN=CG10 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 39/334 (11%)

Query: 95  RKSGERTVE--FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL 152
             SG   V+  F +I       V + + + + + + V N+V  K  L  + +Y F  ++ 
Sbjct: 35  NNSGRSCVKRFFKIIGNEMKNNVYVYLLSILYLCVCVMNKVFAKRTLNKMGNYSFVTSET 94

Query: 153 ATFGYVAVYFSILYLRYH----AGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208
                + V F +LY  Y     + +  +E        F  + LL+A      M      +
Sbjct: 95  HNIICIIV-FQLLYFIYRKTSSSSVYKNESQKNFGWQFFLISLLDASTVIISMIGLTRTT 153

Query: 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIITVASGSNPGHSLKG 266
           G     + Q  +   +    +FLG RY +    G F  L+ I V+ T  S    G +   
Sbjct: 154 GNIQSFIMQLIIPVNMYFWFMFLGYRYHLFNYLGAFIILITIAVVETFLSFETQGEN--- 210

Query: 267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-- 324
             I ++L+MI +F   +   + +EV+F       K  +++  +N+    FQ  F  LL  
Sbjct: 211 -SIIFNLIMISAFNTLSFSNMTREVVF------KKHKINILRLNAMVVLFQ-FFTSLLVL 262

Query: 325 ----LPFLSKLWGIPFSQLPIYLRDGAACFL--------NLGT----LSSGCDGAPLLPL 368
               +PFL +++ +PFS++   + +G  C          N G     +   C+GA    +
Sbjct: 263 PVYNIPFLKEIY-MPFSEMSTNINNGLRCLFYGENTIVENCGVGMVKMCDNCEGAWKTFI 321

Query: 369 LFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
            F   N+  N+   +++   S +  ++ S    P
Sbjct: 322 TFSFFNICDNLLACYIIDKFSTMTYTIVSCIQGP 355

May regulate endogenous transporter.

Plasmodium berghei (taxid: 5821)

>sp|Q7REK3|CRT_PLAYO Putative chloroquine resistance transporter OS=Plasmodium yoelii yoelii GN=PY05061 PE=3 SV=1

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 45/347 (12%)

Query: 81  SDGHEAAVGDLVDKRKSGERTVE--FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLA 138
           ++G E  +GD      SG   ++  F +I       V +   + + + + V N+V  K  
Sbjct: 28  TNGSE--IGD-----NSGRSCIKRFFKIIGNEMKNNVYVYFLSILYLCVCVMNKVFAKRT 80

Query: 139 LVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVT---DEMLSMPKAPFVAVGLLEAL 195
           L  + +Y F  ++      + V F +LY  Y     +   +E        F  + LL+A 
Sbjct: 81  LNKMGNYSFVTSETHNIICIVV-FQLLYFIYRKTSTSGYKNESQKNFGWQFFLISLLDAS 139

Query: 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIIT 253
                M      +G     + Q  +   +    +FLG RY +    G F  L+ I V+ T
Sbjct: 140 TVIISMIGLTRTTGNIQSFIMQLIIPVNMYFCFMFLGYRYHLFNYLGAFIILITIAVVET 199

Query: 254 VASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYG 313
             S      +     I ++L+MI + +  +   + +EV+F       K  +++  +N+  
Sbjct: 200 FLSFETQSEN----SIIFNLIMISALIPLSFSNMTREVVF------KKHKINILRLNAMV 249

Query: 314 SAFQALFICLL------LPFLSKLWGIPFSQLPIYLRDGAACFL--------NLGT---- 355
             FQ  F  LL      +PFL +++ +PFS++   + +G  C          N G     
Sbjct: 250 VLFQ-FFTSLLVLPVYNIPFLKEIY-MPFSEMSTNINNGLRCLFYGQNTVVENCGVGMVK 307

Query: 356 LSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
           +   C+GA    + F   N+  N+   +++   S +  ++ S    P
Sbjct: 308 MCDNCEGAWKTFITFSFFNICDNLLACYIIDKFSTMTYTIVSCIQGP 354

May regulate endogenous transporter.

Plasmodium yoelii yoelii (taxid: 73239)

>sp|Q9N623|CRT_PLAFA Chloroquine resistance transporter OS=Plasmodium falciparum GN=CRT PE=1 SV=1

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 44/325 (13%)

Query: 104 FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFS 163
           F +I K     + I I + + + + V N++  K  L  + +Y F  ++   F  + ++F 
Sbjct: 48  FKLIFKEIKDNIFIYILSIIYLSVCVMNKIFAKRTLNKIGNYSFVTSETHNFICMIMFFI 107

Query: 164 ILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA---------LAAATGMAAGAILSGASIPI 214
           +  L  +    + E        F A+ +L+A         L   TG     +L   SIPI
Sbjct: 108 VYSLFGNKKGNSKERHRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQ-LSIPI 166

Query: 215 LSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274
                    +    + L  RY +    G   V I V I +        + +   I ++L+
Sbjct: 167 --------NMFFCFLILRYRYHLYNYLGA--VIIVVTIALVEMKLSFETQEENSIIFNLV 216

Query: 275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-----LPFLS 329
           +I + +      + +E++F       K  +D+  +N+  S FQ    CL+     LPFL 
Sbjct: 217 LISALIPVCFSNMTREIVF------KKYKIDILRLNAMVSFFQLFTSCLILPVYTLPFLK 270

Query: 330 KLWGIPFSQLPIYLRDGAACF------------LNLGTLSSGCDGAPLLPLLFVLVNMGF 377
           +L  +P++++   +++G AC             L +  L   CDGA     LF   N+  
Sbjct: 271 QL-HLPYNEIWTNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGAWKTFALFSFFNICD 329

Query: 378 NISLLHLLKISSAIVSSLASTFSVP 402
           N+   +++   S +  ++ S    P
Sbjct: 330 NLITSYIIDKFSTMTYTIVSCIQGP 354

May regulate endogenous transporter.

Plasmodium falciparum (taxid: 5833)

>sp|Q8IBZ9|CRT_PLAF7 Putative chloroquine resistance transporter OS=Plasmodium falciparum (isolate 3D7) GN=CG10 PE=3 SV=1

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 44/325 (13%)

Query: 104 FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFS 163
           F +I K     + I I + + + + V N++  K  L  + +Y F  ++   F  + ++F 
Sbjct: 48  FKLIFKEIKDNIFIYILSIIYLSVCVMNKIFAKRTLNKIGNYSFVTSETHNFICMIMFFI 107

Query: 164 ILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA---------LAAATGMAAGAILSGASIPI 214
           +  L  +    + E        F A+ +L+A         L   TG     +L   SIPI
Sbjct: 108 VYSLFGNKKGNSKERHRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQ-LSIPI 166

Query: 215 LSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274
                    +    + L  RY +    G   V I V I +        + +   I ++L+
Sbjct: 167 --------NMFFCFLILRYRYHLYNYLGA--VIIVVTIALVEMKLSFETQEENSIIFNLV 216

Query: 275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-----LPFLS 329
           +I + +      + +E++F       K  +D+  +N+  S FQ    CL+     LPFL 
Sbjct: 217 LISALIPVCFSNMTREIVF------KKYKIDILRLNAMVSFFQLFTSCLILPVYTLPFLK 270

Query: 330 KLWGIPFSQLPIYLRDGAACF------------LNLGTLSSGCDGAPLLPLLFVLVNMGF 377
           +L  +P++++   +++G AC             L +  L   CDGA     LF   N+  
Sbjct: 271 QL-HLPYNEIWTNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGAWKTFALFSFFNICD 329

Query: 378 NISLLHLLKISSAIVSSLASTFSVP 402
           N+   +++   S +  ++ S    P
Sbjct: 330 NLITSYIIDKFSTMTYTIVSCIQGP 354

May regulate endogenous transporter.

Plasmodium falciparum (isolate 3D7) (taxid: 36329)

>sp|Q9GSD3|CRT_PLAVS Putative chloroquine resistance transporter OS=Plasmodium vivax (strain Salvador I) GN=CG10 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 15/257 (5%)

Query: 111 NDRRVEIVIAAAVTVLLGVG--NRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLR 168
           N+ R  I I   + V L V   N++L K  L  + +Y F  ++      + V+F++ ++ 
Sbjct: 52  NEIRENISIYLLIIVYLCVCVMNKLLAKRTLKKIGNYSFVTSETHNCICMVVFFALYFMF 111

Query: 169 YHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSI 228
               +   E        F+ + LL+A +           +G     + Q  +   +    
Sbjct: 112 GRRVMSAKERHRNFGVQFLLISLLDACSVIIAFIGLTRTTGNIQSFVMQLSIPINMFFCF 171

Query: 229 IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL 288
           + L  RY +    G F+  I V I V        + +   I ++L++I S +  +   + 
Sbjct: 172 LILRYRYHLFNYVGAFI--IVVTIAVVEFMLSFETQEENSIVFNLVLIASLIPLSFSNMT 229

Query: 289 KEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLS----KLWGIPFSQLPIYLR 344
           +E++F       K  +++  +N+  S FQ    CL+LP  +    K   +PFS++   ++
Sbjct: 230 REIVF------KKYKINILRLNAVVSFFQIFTSCLMLPMYTLPFLKQINLPFSEIGTNIK 283

Query: 345 DGAAC-FLNLGTLSSGC 360
           +G  C FL   T+   C
Sbjct: 284 NGFRCLFLGQNTIVENC 300

May regulate endogenous transporter.

Plasmodium vivax (strain Salvador I) (taxid: 126793)

>sp|Q7Z0V9|CRT_PLACH Putative chloroquine resistance transporter OS=Plasmodium chabaudi GN=CG10 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/341 (19%), Positives = 139/341 (40%), Gaps = 37/341 (10%)

Query: 84  HEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLK 143
           +++ +G+  + R  G + +   +I       + + + + + + + V N+V  K  L  + 
Sbjct: 29  NDSEIGN--NSRWGGAKRI-CKLIGNEMRNNIYVYLLSILYLCVSVMNKVFSKRTLNKIG 85

Query: 144 HYPFFLAQLATFGYVAVYFSILYLRYHAG---IVTDEMLSMPKAPFVAVGLLEALAAATG 200
           +Y F  +++       + F +LY  Y         +E        F  + LL+A      
Sbjct: 86  NYSFVTSEVHNM-ICTIVFQLLYFIYRKTSNPASRNESQKNFGWQFFLISLLDASTVIIT 144

Query: 201 MAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIITVASGS 258
           M      +G     + Q  +   +    IFLG RY +    G F  L+ I  + TV S  
Sbjct: 145 MIGLTRTTGNIQSFIMQLIIPVNMYFCFIFLGYRYHLFNYLGAFIILITIAAVETVLSYE 204

Query: 259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQA 318
               +     I ++L+MI + +  +   + +EV+F       K  +++  +N+  + FQ 
Sbjct: 205 TQSDN----SIIFNLIMIFALIPLSFSNMTREVVF------KKHKINIIRLNAMVALFQF 254

Query: 319 LFICLLLP-----FLSKLWGIPFSQLPIYLRDGAACFL--------NLGT----LSSGCD 361
               L+LP     FL +++ +PFS++   + DG  C          N G     +   C+
Sbjct: 255 FTSLLVLPVYNISFLKEIY-MPFSEMGTNINDGLRCLFYGQSTIVENCGVGMVKMCDQCE 313

Query: 362 GAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
           GA    + +   N+  N+ + +++   S +  ++ S    P
Sbjct: 314 GAWKTFITYSFFNICDNLLVCYIIDKFSTMTYTIVSCIQGP 354

May regulate endogenous transporter.

Plasmodium chabaudi (taxid: 5825)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	456
359479254	453	PREDICTED: crt homolog 1-like [Vitis vin	0.754	0.759	0.833	1e-153
296083866	344	unnamed protein product [Vitis vinifera]	0.743	0.985	0.836	1e-150
449444865	459	PREDICTED: crt homolog 2-like [Cucumis s	0.962	0.956	0.677	1e-149
224103963	451	predicted protein [Populus trichocarpa]	0.942	0.953	0.693	1e-149
357505093	432	hypothetical protein MTR_7g054190 [Medic	0.826	0.872	0.752	1e-146
356519872	426	PREDICTED: crt homolog 1-like [Glycine m	0.820	0.877	0.762	1e-144
357493893	432	Crt-like protein [Medicago truncatula] g	0.760	0.803	0.784	1e-142
356553645	438	PREDICTED: crt homolog 1-like [Glycine m	0.802	0.835	0.771	1e-141
356577341	428	PREDICTED: crt homolog 1-like [Glycine m	0.824	0.878	0.768	1e-141
145334387	452	CRT (chloroquine-resistance transporter)	0.971	0.980	0.585	1e-134

>gi|359479254|ref|XP_002276436.2| PREDICTED: crt homolog 1-like [Vitis vinifera]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 290/348 (83%), Positives = 319/348 (91%), Gaps = 4/348 (1%)

Query: 110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRY 169
             DRR+++VIAAA TV+LGVGNRVLYKLALVPLKHYPFFLAQLAT GYV VYFSIL LRY
Sbjct: 105 EGDRRMKVVIAAAFTVVLGVGNRVLYKLALVPLKHYPFFLAQLATVGYVLVYFSILSLRY 164

Query: 170 HAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSII 229
           +AGIVTDEMLS+PK P+VAVGLLEAL AATGMAAGAILSGASIPILSQ+FLVWQ+LLS I
Sbjct: 165 NAGIVTDEMLSLPKTPYVAVGLLEALGAATGMAAGAILSGASIPILSQSFLVWQLLLSAI 224

Query: 230 FLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLK 289
           FLGRRY+VNQL GCFLV IGVIITVASGS+ G SLKGAGIFWSLLM+VSFL QAADTVLK
Sbjct: 225 FLGRRYKVNQLLGCFLVAIGVIITVASGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLK 284

Query: 290 EVIFLDAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAA 348
           E IFL AA+RLKGG VDLFVVNSYGSAFQALFICLLLPFLSKLWG+PFS LP YL+DGAA
Sbjct: 285 ERIFLKAAERLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAA 344

Query: 349 CFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVF 408
           CFLN+G+LSSGCDGAPLLPLLFV+VNMGFNISLLHLLKISSA+VS LASTFSVPI+VY+F
Sbjct: 345 CFLNIGSLSSGCDGAPLLPLLFVVVNMGFNISLLHLLKISSAVVSCLASTFSVPIAVYMF 404

Query: 409 TLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN 456
           TLPLPYLGVASSLP  FV GA+IL++GL+IY+WTP   PS   +SS++
Sbjct: 405 TLPLPYLGVASSLPPAFVTGAIILLVGLMIYAWTP---PSMDLNSSSS 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083866|emb|CBI24254.3| unnamed protein product [Vitis vinifera]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 287/343 (83%), Positives = 316/343 (92%), Gaps = 4/343 (1%)

Query: 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIV 174
           +++VIAAA TV+LGVGNRVLYKLALVPLKHYPFFLAQLAT GYV VYFSIL LRY+AGIV
Sbjct: 1   MKVVIAAAFTVVLGVGNRVLYKLALVPLKHYPFFLAQLATVGYVLVYFSILSLRYNAGIV 60

Query: 175 TDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRR 234
           TDEMLS+PK P+VAVGLLEAL AATGMAAGAILSGASIPILSQ+FLVWQ+LLS IFLGRR
Sbjct: 61  TDEMLSLPKTPYVAVGLLEALGAATGMAAGAILSGASIPILSQSFLVWQLLLSAIFLGRR 120

Query: 235 YRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFL 294
           Y+VNQL GCFLV IGVIITVASGS+ G SLKGAGIFWSLLM+VSFL QAADTVLKE IFL
Sbjct: 121 YKVNQLLGCFLVAIGVIITVASGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLKERIFL 180

Query: 295 DAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNL 353
            AA+RLKGG VDLFVVNSYGSAFQALFICLLLPFLSKLWG+PFS LP YL+DGAACFLN+
Sbjct: 181 KAAERLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAACFLNI 240

Query: 354 GTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLP 413
           G+LSSGCDGAPLLPLLFV+VNMGFNISLLHLLKISSA+VS LASTFSVPI+VY+FTLPLP
Sbjct: 241 GSLSSGCDGAPLLPLLFVVVNMGFNISLLHLLKISSAVVSCLASTFSVPIAVYMFTLPLP 300

Query: 414 YLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN 456
           YLGVASSLP  FV GA+IL++GL+IY+WTP   PS   +SS++
Sbjct: 301 YLGVASSLPPAFVTGAIILLVGLMIYAWTP---PSMDLNSSSS 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444865|ref|XP_004140194.1| PREDICTED: crt homolog 2-like [Cucumis sativus] gi|449480984|ref|XP_004156047.1| PREDICTED: crt homolog 2-like [Cucumis sativus]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 311/459 (67%), Positives = 361/459 (78%), Gaps = 20/459 (4%)

Query: 1   MTSCYSRLTAGSAA---SHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYY 57
           MTS   R +AG+A+      L Q P+  P+  VS Y  D   +      ++ R+ K    
Sbjct: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPE--VSIYRNDDLRSG--CGCVILRAPK---- 52

Query: 58  HNNSNYKNNNVIYIVASAAAAERSDGHEAAVGDL----VDKRKSGE--RTVEFNVISKSN 111
           H        +  + ++ +   +R      AVGD     + + KSGE    +    + +S 
Sbjct: 53  HRRLEAVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRS- 111

Query: 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHA 171
           DR+VEIV+AAA TV+ GV NRVLYKLALVPLKHYPFFLAQLATFGYV VYFSILYLRYHA
Sbjct: 112 DRKVEIVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHA 171

Query: 172 GIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFL 231
           GIVTDEMLS PKAP++  GLLEAL AATGMAA AILSGASIP+LSQTFLVWQILLS IFL
Sbjct: 172 GIVTDEMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFL 231

Query: 232 GRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEV 291
           GRRY+ +QLFGCF V IGVIITVASGSN G+SLK AGIFWSLLMI+SFL QAADTVLKE+
Sbjct: 232 GRRYKTSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEI 291

Query: 292 IFLDAAQRLKG-GVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACF 350
           IFLDA+++LKG  +DLFVVNS+GSAFQA+FI  LLPFLSKLWGIPF+QLP YLRDGAACF
Sbjct: 292 IFLDASRQLKGRTIDLFVVNSFGSAFQAVFILALLPFLSKLWGIPFTQLPSYLRDGAACF 351

Query: 351 LNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTL 410
           LN G+L SGCDGAPLLPLLF+LVN+GFNISLLHLLKISSA+VSSLASTFSVPISVY+FTL
Sbjct: 352 LNYGSL-SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPISVYMFTL 410

Query: 411 PLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSS 449
           PLPY+GVAS+LP+GFVAGAVILV+GLLIY+WTP+ S  +
Sbjct: 411 PLPYIGVASALPSGFVAGAVILVLGLLIYAWTPSGSSDT 449

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103963|ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|222849671|gb|EEE87218.1| predicted protein [Populus trichocarpa]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 322/464 (69%), Positives = 367/464 (79%), Gaps = 34/464 (7%)

Query: 1   MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNN 60
           MTSC+ RLT G        QS + S    +S  L+    NQ+    +L RSS R Y  + 
Sbjct: 1   MTSCFRRLTTGPTPPSGPAQSRQRSTADILSLPLKRISINQQ--PGILLRSS-RQYSRS- 56

Query: 61  SNYKNNNVIYIVASAAAAERSDGHEAA---------VGDLV--DKRKSGERTVEFN---V 106
                    +I+ +    +RS G   A         VGD       +S +RTVE N    
Sbjct: 57  ---------FIIEAVEPGDRSGGGNEAEKAGPCACLVGDQTVGGVVESIDRTVEINGKRT 107

Query: 107 ISKSN-----DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVY 161
           IS S+     DR VE+ +AAAVTV+LGVGNRVLYKLAL+PLKHYPFFLAQLATFGYV VY
Sbjct: 108 ISGSDSRSKEDRAVEVAVAAAVTVVLGVGNRVLYKLALLPLKHYPFFLAQLATFGYVIVY 167

Query: 162 FSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLV 221
           F+IL++R+ AGIVTDEMLSMPKAP++ VGLLEAL AATGMAAGAILSGASIPILSQTFLV
Sbjct: 168 FTILHIRHRAGIVTDEMLSMPKAPYILVGLLEALGAATGMAAGAILSGASIPILSQTFLV 227

Query: 222 WQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLL 281
           WQILLS IFLGRRY+VNQL GCFLV +GVIITVASG + G SL+ AGIFWSLLM+ SF L
Sbjct: 228 WQILLSTIFLGRRYKVNQLLGCFLVAVGVIITVASGPSAG-SLREAGIFWSLLMMFSFFL 286

Query: 282 QAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLP 340
           QAADTVLKEVIF DAA++LKGG VDLFV+NSYGSAFQALF+CLLLPF+SKLWGIPFSQLP
Sbjct: 287 QAADTVLKEVIFSDAAKQLKGGSVDLFVINSYGSAFQALFVCLLLPFMSKLWGIPFSQLP 346

Query: 341 IYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFS 400
            YL+DGA CFLN+G+LSSGCDGAPLLPLLFV+VNMGFNISLLHLLKISSA+VSSLASTFS
Sbjct: 347 NYLKDGAVCFLNIGSLSSGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLASTFS 406

Query: 401 VPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPT 444
           VPI+VYVFTLPLPYLGVASSLPTGFVAGA++LV+GLLIY+WTP+
Sbjct: 407 VPIAVYVFTLPLPYLGVASSLPTGFVAGAIVLVLGLLIYAWTPS 450

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505093|ref|XP_003622835.1| hypothetical protein MTR_7g054190 [Medicago truncatula] gi|355497850|gb|AES79053.1| hypothetical protein MTR_7g054190 [Medicago truncatula]

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/388 (75%), Positives = 330/388 (85%), Gaps = 11/388 (2%)

Query: 64  KNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAV 123
           +    I +V ++ A ERSD  E       D++K   R VE N   KS ++ V++V+AAA 
Sbjct: 49  RRRTWIPVVEASGARERSDVSEE------DEKK---RIVEDNC-RKSENQTVKVVVAAAA 98

Query: 124 TVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK 183
             + GVGNRVLYKLALVPLK YPFFLAQ +TF YV VYFSILY+RY AGIVTDEML++PK
Sbjct: 99  VGVFGVGNRVLYKLALVPLKQYPFFLAQFSTFVYVIVYFSILYIRYRAGIVTDEMLAVPK 158

Query: 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGC 243
            PF+ VGLLEAL AATGMAAGA+LSGASIPILSQTFLVWQILLS IFLGRRY+VNQL GC
Sbjct: 159 TPFLIVGLLEALGAATGMAAGAMLSGASIPILSQTFLVWQILLSTIFLGRRYKVNQLLGC 218

Query: 244 FLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG 303
           FLV IGVIITVASGS  G SL+ AGIFWSLLM+VSFL QAADTVLKEVIF DA Q+LKGG
Sbjct: 219 FLVAIGVIITVASGSGAGKSLQEAGIFWSLLMMVSFLFQAADTVLKEVIFSDATQKLKGG 278

Query: 304 -VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDG 362
            +DLFVVNS+GSAFQALFICLLLPFLSKLWGIPFSQLP YL+DGAACFLN+G LSSGCDG
Sbjct: 279 SLDLFVVNSFGSAFQALFICLLLPFLSKLWGIPFSQLPNYLKDGAACFLNIGKLSSGCDG 338

Query: 363 APLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLP 422
           APLLPLLF++VNMGFNISLLHLLKISSA+VS LA+T +VPIS+Y+FTLPLPYLGVASSLP
Sbjct: 339 APLLPLLFIIVNMGFNISLLHLLKISSAVVSCLATTVAVPISIYMFTLPLPYLGVASSLP 398

Query: 423 TGFVAGAVILVMGLLIYSWTPTASPSSA 450
           TGF+AGA+IL+MGLLIY+WTP    S+A
Sbjct: 399 TGFLAGAIILIMGLLIYTWTPPNVSSNA 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519872|ref|XP_003528593.1| PREDICTED: crt homolog 1-like [Glycine max]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/379 (76%), Positives = 321/379 (84%), Gaps = 5/379 (1%)

Query: 73  ASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNR 132
           A    A    G +  V      R  G    E     +S +R  E+++AAAVTV++G GNR
Sbjct: 49  AKCGGAWERSGEKKVVAP--RPRSVGRFAAESG--RESGNRLAEVMLAAAVTVVMGAGNR 104

Query: 133 VLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLL 192
           VLYKLALVPL++YPFFLAQLATFGYV VYFSILY+RY AGIVTDEMLS+PK PF+ VGLL
Sbjct: 105 VLYKLALVPLRNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDEMLSVPKTPFLVVGLL 164

Query: 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252
           EAL AATGMAAGA+LSGASIPILSQ FLVWQILLS  FLGRRY+VNQL GC LV IGVI+
Sbjct: 165 EALGAATGMAAGAMLSGASIPILSQAFLVWQILLSYFFLGRRYKVNQLVGCSLVAIGVIL 224

Query: 253 TVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNS 311
           TV SGS  GHSLK AGIFWSLLMIVSFL QAADTVLKEVIFLDA Q+LKGG +D+FVVNS
Sbjct: 225 TVVSGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATQKLKGGSLDMFVVNS 284

Query: 312 YGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFV 371
           +GSAFQALFICLLLPFLSKLWGIPF QLP YL+DGAACFLN+GTLS  CDGAPLLPLLFV
Sbjct: 285 FGSAFQALFICLLLPFLSKLWGIPFGQLPNYLKDGAACFLNVGTLSRACDGAPLLPLLFV 344

Query: 372 LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVI 431
           +VNMGFNISLLHLLKISSA+VS LASTFSVPI++YVFTLPLPYLGVASSLPTGFVAGA+I
Sbjct: 345 IVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIYVFTLPLPYLGVASSLPTGFVAGAII 404

Query: 432 LVMGLLIYSWTPTASPSSA 450
           L++GLLIY+WTP+   S+A
Sbjct: 405 LIIGLLIYAWTPSNGSSTA 423

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493893|ref|XP_003617235.1| Crt-like protein [Medicago truncatula] gi|355518570|gb|AET00194.1| Crt-like protein [Medicago truncatula]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/353 (78%), Positives = 315/353 (89%), Gaps = 6/353 (1%)

Query: 105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
           +V  +S ++  E+ +AAA TV++GVGNRVLYKLALVPLK YPFFLAQ     YV VYF I
Sbjct: 84  DVAGRSGNKAAEVAVAAAATVVMGVGNRVLYKLALVPLKQYPFFLAQ-----YVIVYFGI 138

Query: 165 LYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQI 224
           +Y+R+ AGIVTDEMLS+PK PFV +GLLEALAAATGMAAGAILSGASIPILSQTFLVWQI
Sbjct: 139 MYIRHRAGIVTDEMLSLPKTPFVVIGLLEALAAATGMAAGAILSGASIPILSQTFLVWQI 198

Query: 225 LLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAA 284
           LLSIIFLGRRY+VN L GCFLV IGV++TVASG + G+SLK  G+FWSLLMIVSFLLQAA
Sbjct: 199 LLSIIFLGRRYKVNHLLGCFLVTIGVVVTVASGPDAGNSLKDGGLFWSLLMIVSFLLQAA 258

Query: 285 DTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYL 343
           DTVLKE+IFLDA ++LKGG VDLFVVNSYGSAFQALFICLLLPFLSKLWG+PFSQLP YL
Sbjct: 259 DTVLKELIFLDANKKLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVPFSQLPNYL 318

Query: 344 RDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPI 403
           +DGAACFLN+GTLSSGCDGAPLLPLLF++VN+GFNI+LLHLLKISSA+VS LASTFSVPI
Sbjct: 319 KDGAACFLNVGTLSSGCDGAPLLPLLFIIVNIGFNIALLHLLKISSAVVSCLASTFSVPI 378

Query: 404 SVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN 456
           S+YVFTL LPYLGVASSLPTGFVAGA++L++GLLIY+WTP+   S A  S  +
Sbjct: 379 SIYVFTLQLPYLGVASSLPTGFVAGAIVLIIGLLIYAWTPSNGSSGASFSEGS 431

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553645|ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max]

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/372 (77%), Positives = 327/372 (87%), Gaps = 6/372 (1%)

Query: 78  AERSDGHEAAVGDL---VDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVL 134
           ++   G E  VG     V+ R+  E     + +  S +R VE+  AA  TV+LGVGNRVL
Sbjct: 55  SDDVGGREEKVGPCSYAVEDRRVAEDGGS-DAVVGSRNRVVEVAAAAVATVVLGVGNRVL 113

Query: 135 YKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA 194
           YKLALVPLKHYPFFLAQLATFGYV VYF+ILY+R+HAGIVTDEML  PKAPF+ VGLLEA
Sbjct: 114 YKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHHAGIVTDEMLDAPKAPFIVVGLLEA 173

Query: 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254
           LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRY+VNQL GCFLV IGV++TV
Sbjct: 174 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNQLLGCFLVTIGVVVTV 233

Query: 255 ASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG--VDLFVVNSY 312
           ASG+  G+ LK  G+FWSLLMIVSF LQAADTVLKE+IFLD++++LKGG  +DLFVVNSY
Sbjct: 234 ASGAGAGNLLKEGGMFWSLLMIVSFFLQAADTVLKEIIFLDSSRKLKGGCCMDLFVVNSY 293

Query: 313 GSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVL 372
           GSAFQALF+CLLLPFLSKLWGIPFSQLP YL+DGAACFLN GTLSSGCDGAPLLPLLF++
Sbjct: 294 GSAFQALFVCLLLPFLSKLWGIPFSQLPNYLKDGAACFLNFGTLSSGCDGAPLLPLLFII 353

Query: 373 VNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVIL 432
           VN+GFNI+LLHLLKISSA+VS LASTFSVPIS+YVFT+PLPYLGVASSLPTGF+AGA+IL
Sbjct: 354 VNIGFNIALLHLLKISSAVVSCLASTFSVPISIYVFTMPLPYLGVASSLPTGFMAGAIIL 413

Query: 433 VMGLLIYSWTPT 444
           ++GLLIY+WTP+
Sbjct: 414 ILGLLIYAWTPS 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577341|ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 292/380 (76%), Positives = 328/380 (86%), Gaps = 4/380 (1%)

Query: 72  VASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGN 131
           V    A +RS   +AAV      R      +      +S +R  E+V+AAAVTV++G GN
Sbjct: 49  VKCGGAWKRSGEKKAAVAA---PRPCAVGRLAAESGRESGNRSAEVVLAAAVTVVMGAGN 105

Query: 132 RVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL 191
           RVLYKLALVPLK+YPFFLAQLATFGYV VYFSILY+RY AGIVTDEMLS+PK PF+ VGL
Sbjct: 106 RVLYKLALVPLKNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDEMLSVPKTPFLVVGL 165

Query: 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251
           LEAL AATGMAAGA+LSGASIPILSQ FLVWQILLS IFLGRRY+VNQL GCFLV IGVI
Sbjct: 166 LEALGAATGMAAGAMLSGASIPILSQAFLVWQILLSYIFLGRRYKVNQLVGCFLVAIGVI 225

Query: 252 ITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVN 310
           +TVASGS  GHSLK AGIFWSLLMIVSFL QAADTVLKEVIFLDA ++LKGG +D+FVVN
Sbjct: 226 LTVASGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLDMFVVN 285

Query: 311 SYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLF 370
           S+GSAFQALFICLLLPFLSKLWG+PF QLP YL+DGAACFLN+GTLS GCDGAPLLPLLF
Sbjct: 286 SFGSAFQALFICLLLPFLSKLWGVPFGQLPNYLKDGAACFLNVGTLSRGCDGAPLLPLLF 345

Query: 371 VLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAV 430
           ++VNMGFNISLLHLLKISSA+VS LASTFSVPI++YVFTLPLPY+GVASSLP GFVAGA+
Sbjct: 346 IIVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIYVFTLPLPYIGVASSLPAGFVAGAI 405

Query: 431 ILVMGLLIYSWTPTASPSSA 450
           IL++GLLIY+WTP+ S S+A
Sbjct: 406 ILIIGLLIYAWTPSNSSSTA 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334387|ref|NP_001078575.1| CRT (chloroquine-resistance transporter)-like transporter 3 [Arabidopsis thaliana] gi|20260240|gb|AAM13018.1| unknown protein [Arabidopsis thaliana] gi|22136522|gb|AAM91339.1| unknown protein [Arabidopsis thaliana] gi|51971016|dbj|BAD44200.1| unnamed protein product [Arabidopsis thaliana] gi|332004387|gb|AED91770.1| CRT (chloroquine-resistance transporter)-like transporter 3 [Arabidopsis thaliana]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/454 (58%), Positives = 332/454 (73%), Gaps = 11/454 (2%)

Query: 1   MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNN 60
           M +   R T G  AS + ++S   +    +S  +R +H + RLP  L+  SS+R      
Sbjct: 1   MATTSRRFTTGLFASITSVKSHSANRPQSISL-IRRNHIDHRLP--LIVPSSRRWIIQAA 57

Query: 61  SNYKNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA 120
            ++      +   + A  ++   +  A+GD       G  +   +VI   + +  EIVI 
Sbjct: 58  RSWDG----FDDGAEAEIKKPGAYGYAIGD---NEIEGSSSSTVHVIDGEHVKTAEIVIW 110

Query: 121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS 180
           AAVT   GVGNRV+YKLALVPLK YPFFLAQL+TFGYVAVY++ILY RY AG VTD MLS
Sbjct: 111 AAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTDAMLS 170

Query: 181 MPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL 240
           +PK+PF+ VG+LEALAAA GMAA A LSG S  +LSQTFLVWQI  SIIFLGRRY VNQ+
Sbjct: 171 VPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYSVNQI 230

Query: 241 FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL 300
            GC LV +GVI++VASGS   HSL  AG+ W LLM++SFLLQ A TVLKEVIF+D+ +RL
Sbjct: 231 LGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDSQRRL 290

Query: 301 KGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSG 359
           KG  +DLF+VNSYGSAFQA+ I LLLPFLSKLWGIPF+QL  YL+DGA CFLN GT++ G
Sbjct: 291 KGASLDLFIVNSYGSAFQAICIALLLPFLSKLWGIPFNQLGTYLKDGAVCFLNNGTITKG 350

Query: 360 CDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVAS 419
           CDGAP LPLLFV++N+G+NI+LL LLKISSA+VS LAST SVPI+V++FT+PLPYLGVAS
Sbjct: 351 CDGAPFLPLLFVIMNIGYNIALLRLLKISSAVVSCLASTVSVPIAVFLFTMPLPYLGVAS 410

Query: 420 SLPTGFVAGAVILVMGLLIYSWTPTASPSSACSS 453
           SLP GF+ G +ILV+G+++YSWTP  + SS   S
Sbjct: 411 SLPKGFMGGTIILVLGMILYSWTPHGANSSHTDS 444

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	456
TAIR|locus:2150250	507	CLT1 "CRT (chloroquine-resista	0.620	0.558	0.686	9.5e-120
TAIR|locus:2177008	452	CLT3 "CRT (chloroquine-resista	0.940	0.949	0.554	4.2e-118
TAIR|locus:2136032	431	CLT2 "CRT (chloroquine-resista	0.741	0.784	0.530	3.4e-93
DICTYBASE|DDB_G0270204	478	crtp3 "chloroquine resistance	0.532	0.508	0.258	2.4e-20
DICTYBASE|DDB_G0277321	484	crtp2 "chloroquine resistance	0.532	0.502	0.246	2.6e-19
DICTYBASE|DDB_G0276943	473	crtp1 "chloroquine resistance	0.532	0.513	0.257	1.3e-14

TAIR|locus:2150250 CLT1 "CRT (chloroquine-resistance transporter)-like transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1005 (358.8 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
 Identities = 195/284 (68%), Positives = 227/284 (79%)

Query:   157 YVAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILS 216
             YVAVYFSILY RY AGIVT EMLS+PK PF+                   LSG S  +LS
Sbjct:   205 YVAVYFSILYFRYRAGIVTKEMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLS 264

Query:   217 QTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276
             QTFLVWQIL SIIFLGRRYR+NQ+ GC LV  GVI++VASGS   HS K  GI WSLLM+
Sbjct:   265 QTFLVWQILFSIIFLGRRYRINQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMV 324

Query:   277 VSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIP 335
              SFLLQ ADTV+KEVIFLD+ +RLKG  +DLFVVNSYGS FQ + I LLLPFLSKLWGIP
Sbjct:   325 FSFLLQGADTVMKEVIFLDSKKRLKGASLDLFVVNSYGSIFQVICIALLLPFLSKLWGIP 384

Query:   336 FSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSL 395
             F+QLP Y+RDG ACFLN+G+  +GC+GAPLLP++FV++NM +NISLL L+KISSA+VSSL
Sbjct:   385 FNQLPSYIRDGGACFLNIGSRITGCEGAPLLPVMFVMMNMAYNISLLRLIKISSAVVSSL 444

Query:   396 ASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIY 439
             AST SVPI+VY FTLPLPYLGVAS+LP GFVAG +ILV+G+L+Y
Sbjct:   445 ASTVSVPIAVYCFTLPLPYLGVASTLPRGFVAGTIILVVGMLLY 488

GO:0009507 "chloroplast" evidence=ISM

GO:0002229 "defense response to oomycetes" evidence=IGI

GO:0009536 "plastid" evidence=IDA

GO:0034635 "glutathione transport" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IMP

TAIR|locus:2177008 CLT3 "CRT (chloroquine-resistance transporter)-like transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
 Identities = 244/440 (55%), Positives = 305/440 (69%)

Query:     1 MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFXXXXXXXXXXX 60
             M +   R T G  AS + ++S   +    +S  +R +H + RLP  L+            
Sbjct:     1 MATTSRRFTTGLFASITSVKSHSANRPQSISL-IRRNHIDHRLP--LIVPSSRRWIIQAA 57

Query:    61 XXXXXXXVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA 120
                      +   + A  ++   +  A+GD  +   S   TV  +VI   + +  EIVI 
Sbjct:    58 RSWDG----FDDGAEAEIKKPGAYGYAIGDN-EIEGSSSSTV--HVIDGEHVKTAEIVIW 110

Query:   121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS 180
             AAVT   GVGNRV+YKLALVPLK YPFFLAQL+TFGYVAVY++ILY RY AG VTD MLS
Sbjct:   111 AAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTDAMLS 170

Query:   181 MPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL 240
             +PK+PF+                   LSG S  +LSQTFLVWQI  SIIFLGRRY VNQ+
Sbjct:   171 VPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYSVNQI 230

Query:   241 FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL 300
              GC LV +GVI++VASGS   HSL  AG+ W LLM++SFLLQ A TVLKEVIF+D+ +RL
Sbjct:   231 LGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDSQRRL 290

Query:   301 KGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSG 359
             KG  +DLF+VNSYGSAFQA+ I LLLPFLSKLWGIPF+QL  YL+DGA CFLN GT++ G
Sbjct:   291 KGASLDLFIVNSYGSAFQAICIALLLPFLSKLWGIPFNQLGTYLKDGAVCFLNNGTITKG 350

Query:   360 CDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVAS 419
             CDGAP LPLLFV++N+G+NI+LL LLKISSA+VS LAST SVPI+V++FT+PLPYLGVAS
Sbjct:   351 CDGAPFLPLLFVIMNIGYNIALLRLLKISSAVVSCLASTVSVPIAVFLFTMPLPYLGVAS 410

Query:   420 SLPTGFVAGAVILVMGLLIY 439
             SLP GF+ G +ILV+G+++Y
Sbjct:   411 SLPKGFMGGTIILVLGMILY 430

GO:0009507 "chloroplast" evidence=ISM

GO:0002229 "defense response to oomycetes" evidence=IGI

GO:0009536 "plastid" evidence=IDA

GO:0034635 "glutathione transport" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IMP

TAIR|locus:2136032 CLT2 "CRT (chloroquine-resistance transporter)-like transporter 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 182/343 (53%), Positives = 236/343 (68%)

Query:    98 GERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY 157
             G  T E ++ S  N     IV  + V V L V NRVLYKLALVP+K YPFF+AQL TFGY
Sbjct:    79 GASTEESSIPSNRN----LIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGY 134

Query:   158 VAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQ 217
             V +YF+ILY R   GIVT+EM+ +PK  F                   +L G  IPIL+Q
Sbjct:   135 VLIYFTILYTRRRLGIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQ 194

Query:   218 TFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV 277
             T+LVWQ+L +++ LGRR+ +NQ+ GC LV +GV++ V+SGS    +L G G  W  +++ 
Sbjct:   195 TYLVWQLLFALLILGRRFLLNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVA 254

Query:   278 SFLLQAADTVLKEVIFLDAAQRLKG-GVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPF 336
             S   QA  +++KE +F DAA+RL+G  +D+FVVNS+GS FQALF+ LLLPFLS L GIPF
Sbjct:   255 SAAFQAGASIIKEFVFNDAAKRLEGKSLDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPF 314

Query:   337 SQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLA 396
             + LP YL+DGA CF N G   SGCDGAP+LPLL++  N+ FNISLLHL+KISSAIVSSL 
Sbjct:   315 ASLPSYLKDGAGCFFNTGAKISGCDGAPILPLLYISTNLAFNISLLHLVKISSAIVSSLT 374

Query:   397 STFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIY 439
                SVP++VY+ + PLPYL   SSL + F  G ++LV+GLL+Y
Sbjct:   375 MMLSVPLAVYIMSKPLPYLPGGSSLSSNFTMGCIVLVLGLLLY 417

GO:0009507 "chloroplast" evidence=IDA

GO:0002229 "defense response to oomycetes" evidence=IGI

GO:0009536 "plastid" evidence=IDA

GO:0034635 "glutathione transport" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IMP

DICTYBASE|DDB_G0270204 crtp3 "chloroquine resistance transporter-like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 204 (76.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
 Identities = 66/255 (25%), Positives = 121/255 (47%)

Query:   107 ISKSNDRR-VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYF-SI 164
             + KS  +  + I+I   + ++ GV N VL K  ++   +Y FFL+Q+  +GY+ ++  ++
Sbjct:    44 LKKSMTKETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNYGYLPIFLVAM 103

Query:   165 LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQI 224
              Y  Y    V  E  + P+  FV                    SG    +L+Q  + + +
Sbjct:   104 WYKMYCTSDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTM 163

Query:   225 LLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAA 284
             + S IFL  RY + QL G  ++  GVI+++   S  G S  G  +F++   ++S +  A 
Sbjct:   164 IASFIFLRERYSLFQLGGAAVILGGVIVSLIP-SLVGGSSGGNILFYNFFYLISVIPGAL 222

Query:   285 DTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPI 341
               V K++ F    Q +   +D++ +  +   +Q+LF  +L P   +L     I F+++  
Sbjct:   223 SNVYKDIAF----QSID--MDVWYLQFWDCLYQSLFGSILFPVNNWLPPPATIKFTEIIP 276

Query:   342 YLRDGAACFLNLGTL 356
              +RDGA C     T+
Sbjct:   277 SMRDGALCLGGKNTI 291

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0277321 crtp2 "chloroquine resistance transporter-like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 192 (72.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
 Identities = 63/256 (24%), Positives = 116/256 (45%)

Query:   105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
             N ISK       +++   + +L GV N +L K  +    +Y FFL QL  +GYV ++ +I
Sbjct:    51 NSISKQT---ATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFLNQLTNYGYVPIFGAI 107

Query:   165 -LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
              LY       +  +  S P+  FV                    +G    +L+Q+ + + 
Sbjct:   108 VLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFT 167

Query:   224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
             +LLS IFL  RY + QL G  ++  GV++++      G++  G  +F++   ++S +  A
Sbjct:   168 MLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNT-SGNMLFYNFFYLISMIPYA 226

Query:   284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLP 340
                V K + F          +D++ +  + + +Q+L   +L P   +L     + F+Q+ 
Sbjct:   227 FSNVYKAIGFSTVED-----MDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVI 281

Query:   341 IYLRDGAACFLNLGTL 356
               L+ G  C   + TL
Sbjct:   282 PQLKAGGKCLGGINTL 297

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0276943 crtp1 "chloroquine resistance transporter-like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 66/256 (25%), Positives = 114/256 (44%)

Query:   105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
             N +SK     + I+I   + V  GV N VL K  +    +Y FFL+QL  FGYV ++ ++
Sbjct:    43 NSMSKET---ITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGAV 99

Query:   165 L-YLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
               Y  +    +  E    P   F                     SG    +L+Q  + + 
Sbjct:   100 TAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFT 159

Query:   224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
             ++ S IFL  RY + QL G  ++ IG ++T    S  G S  G   FW+   ++S +  A
Sbjct:   160 MIASFIFLKERYSLIQLGGALVI-IGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPGA 218

Query:   284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLP 340
                V K++ F   A      +D++ +  + S +Q++F   L P   +L     + F Q+ 
Sbjct:   219 LSNVYKDIGFQAVAD-----MDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQIL 273

Query:   341 IYLRDGAACFLNLGTL 356
              ++++GA C   + ++
Sbjct:   274 PFMKEGAECLAGINSI 289

GO:0012506 "vesicle membrane" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022281001 SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (453 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	456
pfam08627	130	pfam08627, CRT-like, CRT-like	6e-05

>gnl|CDD|117200 pfam08627, CRT-like, CRT-like

 Score = 42.2 bits (99), Expect = 6e-05
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
           N +SK     + I+I   + ++ GV N VL K  +    +Y FFL+QL  +GYV ++ + 
Sbjct: 49  NSMSKET---LTILIYVVLYIISGVINSVLLKKVMNKFTNYGFFLSQLTNYGYVPIFGAA 105

Query: 165 -LYLRYHAGIVTDEMLSMPKAPFV 187
             Y  Y    +  E  + P+  FV
Sbjct: 106 MWYKIYFTSDIPKETRNFPQYKFV 129

This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT). Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	456
KOG3912	372	consensus Predicted integral membrane protein [Gen	100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.94
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.91
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.89
KOG2766	336	consensus Predicted membrane protein [Function unk	99.87
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.72
PF08627	130	CRT-like: CRT-like; InterPro: IPR013936 This regio	99.58
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.5
KOG1581	327	consensus UDP-galactose transporter related protei	99.43
PLN00411	358	nodulin MtN21 family protein; Provisional	99.39
KOG2765	416	consensus Predicted membrane protein [Function unk	99.32
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.2
KOG1582	367	consensus UDP-galactose transporter related protei	99.13
PRK11272	292	putative DMT superfamily transporter inner membran	99.09
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.07
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.05
PRK11689	295	aromatic amino acid exporter; Provisional	99.01
PRK15430	296	putative chloramphenical resistance permease RarD;	98.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.83
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.79
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.69
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.61
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.58
KOG1580	337	consensus UDP-galactose transporter related protei	98.54
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.37
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.35
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.29
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.12
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.02
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.0
COG2510	140	Predicted membrane protein [Function unknown]	97.65
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.42
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.31
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.09
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.9
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	96.84
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.35
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.32
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.25
PLN00411	358	nodulin MtN21 family protein; Provisional	96.21
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.69
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.59
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.43
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.33
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	95.11
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.08
PRK11689	295	aromatic amino acid exporter; Provisional	94.81
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.58
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.54
COG0697	292	RhaT Permeases of the drug/metabolite transporter	94.46
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.44
PRK11272	292	putative DMT superfamily transporter inner membran	94.32
PRK10650	109	multidrug efflux system protein MdtI; Provisional	94.07
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	93.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	93.71
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.64
PRK11431	105	multidrug efflux system protein; Provisional	93.58
PRK15430	296	putative chloramphenical resistance permease RarD;	93.49
COG2076	106	EmrE Membrane transporters of cations and cationic	92.98
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	92.47
COG2962	293	RarD Predicted permeases [General function predict	91.43
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	90.97
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	90.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	89.91
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	88.87
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	86.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	85.54
KOG2765	416	consensus Predicted membrane protein [Function unk	85.31
KOG1580	337	consensus UDP-galactose transporter related protei	80.67

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=100.00  E-value=3.1e-50  Score=389.36  Aligned_cols=308  Identities=21%  Similarity=0.253  Sum_probs=254.3

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHhC------cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCC---cc-------cccccC
Q 012821          118 VIAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGI---VT-------DEMLSM  181 (456)
Q Consensus       118 ~il~~~~v~~G~~N~V~~K~~~~------~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~---i~-------~e~~~~  181 (456)
                      .++.+.||++|+.|+++.||+++      +-|+||+.|+..|++|+..++..+.++|.+...   ..       ++..++
T Consensus         5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf   84 (372)
T KOG3912|consen    5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF   84 (372)
T ss_pred             hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence            46789999999999999999996      469999999999999987776666666554322   22       122245


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC---C
Q 012821          182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG---S  258 (456)
Q Consensus       182 p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg---~  258 (456)
                      ++..|+.|++||++++.++|+|+++|+++++||+|++.|+||.++|..||+|+.+..||+|++.+.+|++++...+   .
T Consensus        85 ~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~  164 (372)
T KOG3912|consen   85 NPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV  164 (372)
T ss_pred             CcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence            6677889999999999999999999999999999999999999999999999999999999999999999997653   2


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHH-HHHHHhhhhhcccCCCCC
Q 012821          259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQAL-FICLLLPFLSKLWGIPFS  337 (456)
Q Consensus       259 ~~~~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i-~~~lllP~~~~~~g~~~~  337 (456)
                      ++.-..-.+.+.|+++++++|++.|+|+|+|||.++++      ++++.+.+||||+||+. ++.+.+|++..+.|.+++
T Consensus       165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~------nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS  238 (372)
T KOG3912|consen  165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS------NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFS  238 (372)
T ss_pred             cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc------cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCc
Confidence            22111112457899999999999999999999999987      88899999999999965 455779998888887887


Q ss_pred             Cchhh-hhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccC
Q 012821          338 QLPIY-LRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLG  416 (456)
Q Consensus       338 ~~~~~-l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G  416 (456)
                      ..|+. ++|..+.+...+..+.    .......+++..++||+.++.++|+.||++|++.|++|+ ..+|++.++.   |
T Consensus       239 ~~~~g~~eD~~~~~~~~~e~p~----l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt-~~IWv~si~m---~  310 (372)
T KOG3912|consen  239 CNPRGVLEDWGDAFAALQESPS----LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRT-YVIWVFSIAM---G  310 (372)
T ss_pred             CCCCcchhhHHHHHHHhcCCch----hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhh-hhhhHhHHHH---H
Confidence            77776 7777766654443320    011224456677799999999999999999999999997 8999999885   7


Q ss_pred             CCCCCchhhHHHHHHHHHhhhhcc
Q 012821          417 VASSLPTGFVAGAVILVMGLLIYS  440 (456)
Q Consensus       417 ~~~~~~~~~liG~vilv~G~liYn  440 (456)
                      |+ .++..|+.||++++.|+++||
T Consensus       311 ~E-~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  311 WE-YFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHHH
Confidence            74 577799999999999999999

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=1.1e-33  Score=287.35  Aligned_cols=285  Identities=21%  Similarity=0.213  Sum_probs=218.3

Q ss_pred             hhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhc
Q 012821          128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL  207 (456)
Q Consensus       128 G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~t  207 (456)
                      ...|+....+..+ ..|.|.+|+..+.+..+++|.+++.+|+..++. .+..+.++|+|+++|+||+.+|.+.+.|+.||
T Consensus        26 ~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~-~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT  103 (334)
T PF06027_consen   26 TGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW-LKVLKRPWWKYFLLALLDVEANYLVVLAYQYT  103 (334)
T ss_pred             HhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccc-hhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3345555556655 899999999998555566666666666554332 23456789999999999999999999999999


Q ss_pred             chhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC--CCCCcchHHHHHHHHHHHHHHHH
Q 012821          208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAAD  285 (456)
Q Consensus       208 s~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~--s~~~~~iig~lLiilS~i~~A~~  285 (456)
                      +.++.|+|+|+.||+++++|++|||+||++.|++|++++++|+++++.++...++  +.+++.+.|++++++|++++|++
T Consensus       104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~  183 (334)
T PF06027_consen  104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS  183 (334)
T ss_pred             cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998876533221  22356799999999999999999


Q ss_pred             HHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcch
Q 012821          286 TVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPL  365 (456)
Q Consensus       286 ~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~l  365 (456)
                      +|+||+.+|++        |..++.||+|+||+++..+.++++..      +++.+.-+++               ....
T Consensus       184 nV~~E~~v~~~--------~~~~~lg~~Glfg~ii~~iq~~ile~------~~i~~~~w~~---------------~~~~  234 (334)
T PF06027_consen  184 NVLEEKLVKKA--------PRVEFLGMLGLFGFIISGIQLAILER------SGIESIHWTS---------------QVIG  234 (334)
T ss_pred             HHHHHHhcccC--------CHHHHHHHHHHHHHHHHHHHHHheeh------hhhhccCCCh---------------hhHH
Confidence            99999999875        33456799999999987776665431      1111111111               1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCCC
Q 012821          366 LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTA  445 (456)
Q Consensus       366 l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~~  445 (456)
                      +.+.|.++.+.++.....+++++||+..++......|.+. ++.+.+  .|  .+++|++++|++++++|.++|+..+++
T Consensus       235 ~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~al-i~~i~~--f~--~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  235 LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYAL-IIDIFF--FG--YKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHH-HHHHHh--cC--ccccHHHHHHHHHHHHHhheEEccCCc
Confidence            5567888888899999999999999999997654444333 333332  23  357899999999999999999987765


Q ss_pred             CCC
Q 012821          446 SPS  448 (456)
Q Consensus       446 ~~~  448 (456)
                      ..+
T Consensus       310 ~~~  312 (334)
T PF06027_consen  310 EEE  312 (334)
T ss_pred             ccc
Confidence            543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.94  E-value=7.8e-25  Score=219.81  Aligned_cols=289  Identities=22%  Similarity=0.272  Sum_probs=211.0

Q ss_pred             HhhhhHHHHHHHHhC-cCCC-hhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHH
Q 012821          126 LLGVGNRVLYKLALV-PLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAA  203 (456)
Q Consensus       126 ~~G~~N~V~~K~~~~-~~f~-yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia  203 (456)
                      +.-..|.+..+.... +.++ ||.+++...++.+.++.+.......     .++.++.|.+++++++++|++++.+++.+
T Consensus        10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   84 (303)
T PF08449_consen   10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHHHHHH
Confidence            333446566655444 4455 7999999876655544433322211     33456788899999999999999999999


Q ss_pred             hhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCC---CCcchHHHHHHHHHHH
Q 012821          204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSL---KGAGIFWSLLMIVSFL  280 (456)
Q Consensus       204 ~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~---~~~~iig~lLiilS~i  280 (456)
                      +.|+|.|.++++|++.++++|+++++++||||++.||+|++++++|+++...++..+++..   ......|.+++++|.+
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~  164 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLL  164 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999887654332211   1122348999999999


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCC
Q 012821          281 LQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGC  360 (456)
Q Consensus       281 ~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c  360 (456)
                      ++|+++++|||++++|      +.+.++...++.+|+.++..+..+.+.  .        ....++.+-......     
T Consensus       165 ~~a~~~~~qe~~~~~~------~~~~~~~mfy~n~~~~~~~~~~~~~l~--~--------~~~~~~~~f~~~~p~-----  223 (303)
T PF08449_consen  165 LDAFTGVYQEKLFKKY------GKSPWELMFYTNLFSLPFLLILLFLLP--T--------GEFRSAIRFISAHPS-----  223 (303)
T ss_pred             HHHHHHHHHHHHHHHh------CCcHHHHHHHHHHHHHHHHHHHHHHHH--h--------hHhhHHHHHHHHhHH-----
Confidence            9999999999999998      444566667777777765544333211  1        111222221111111     


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821          361 DGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS  440 (456)
Q Consensus       361 ~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn  440 (456)
                        ......++.++..+.+.+...++|+.||++.+++.++|.++++.+..+.|   |+  .+++.+++|.++++.|+.+|+
T Consensus       224 --~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f---~~--~~~~~~~~G~~lv~~g~~~~~  296 (303)
T PF08449_consen  224 --VLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIF---GH--PLSPLQWIGIVLVFAGIFLYS  296 (303)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhc---CC--cCChHHHHHHHHhHHHHHHHH
Confidence              12233556666677777888889999999999999999877766655444   44  478899999999999999999


Q ss_pred             CCCCCCC
Q 012821          441 WTPTASP  447 (456)
Q Consensus       441 ~~~~~~~  447 (456)
                      ...+|++
T Consensus       297 ~~~~k~~  303 (303)
T PF08449_consen  297 YAKKKKN  303 (303)
T ss_pred             HhhccCC
Confidence            9877653

; GO: 0055085 transmembrane transport

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.91  E-value=1.4e-23  Score=205.60  Aligned_cols=216  Identities=22%  Similarity=0.295  Sum_probs=169.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC---
Q 012821          184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP---  260 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~---  260 (456)
                      +++++||++|+++|.+.++++.+++++++|+++|+.|++|+++|+++||||+++.||++++++++|++++..++..+   
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~   97 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN   97 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence            77899999999999999999999999999999999999999999999999999999999999999999997643221   


Q ss_pred             --CCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccC
Q 012821          261 --GHS-----LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWG  333 (456)
Q Consensus       261 --~~s-----~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g  333 (456)
                        +..     .....+.|.++++++++++|+++||+||.+|+.      +.++|..|.+..+|+.++..+......   +
T Consensus        98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~------~~s~~~~N~qL~~~gi~~~~~~~~~~~---~  168 (244)
T PF04142_consen   98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS------NVSLWIQNMQLYLFGILFNLLALLLSD---G  168 (244)
T ss_pred             ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc------chhHHHHHHHHHHHHHHHHHHHHhccc---c
Confidence              111     123457899999999999999999999999985      478899999999999877655433211   1


Q ss_pred             CCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhcccccc
Q 012821          334 IPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLP  413 (456)
Q Consensus       334 ~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~  413 (456)
                      .+.      .++|+  |.|++          .+.++-++.+.+..+....++||.|++++.++.++.+.++..+....| 
T Consensus       169 ~~~------~~~g~--f~G~~----------~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf-  229 (244)
T PF04142_consen  169 SAI------SESGF--FHGYS----------WWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLF-  229 (244)
T ss_pred             ccc------ccCCc--hhhcc----------hHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence            111      12222  22222          245667778889999999999999999999999988876666555444 


Q ss_pred             ccCCCCCCchhhHHHHHH
Q 012821          414 YLGVASSLPTGFVAGAVI  431 (456)
Q Consensus       414 ~~G~~~~~~~~~liG~vi  431 (456)
                        |  .+++..+++|..+
T Consensus       230 --~--~~~s~~f~lg~~~  243 (244)
T PF04142_consen  230 --G--FPPSLSFLLGAAL  243 (244)
T ss_pred             --C--CCCchHHhhheec
Confidence              2  3356667777654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.4e-21  Score=196.73  Aligned_cols=297  Identities=16%  Similarity=0.189  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHH---HHHHHHHHHHHHhc------CCcccccccCC--C
Q 012821          115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY---VAVYFSILYLRYHA------GIVTDEMLSMP--K  183 (456)
Q Consensus       115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y---~~v~f~il~~~~~~------~~i~~e~~~~p--~  183 (456)
                      ++-+.+ +.+.+.-++=..+-|...... ..+|+-+..-++.+   +++++..++...+.      +..+++-..-|  -
T Consensus        15 ~k~~~l-~~~t~~~~~l~l~l~ys~~~~-~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~   92 (345)
T KOG2234|consen   15 MKYLSL-IVLTAQNTALTLLLRYSRTRE-KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRET   92 (345)
T ss_pred             HHHHHH-HHHHHHHhhHHHHHHHHhcCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHH
Confidence            443333 333333444455555555443 44555544443344   33333333332211      11222222333  3


Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCC--CC
Q 012821          184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN--PG  261 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~--~~  261 (456)
                      .+..+|+++++++|.+.++++.+.++..+|+..|..|..|+++++++|+||+++.||.+.++.++|++++..+..+  ++
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a  172 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA  172 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence            6789999999999999999999999999999999999999999999999999999999999999999999743211  11


Q ss_pred             C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCc
Q 012821          262 H--SLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQL  339 (456)
Q Consensus       262 ~--s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~  339 (456)
                      +  ....+.+.|...++.+|..+++++||.||++|+.      +.+.|..|-.-.+||.++.++.+-      +.+.+..
T Consensus       173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s------~~s~wi~NiqL~~~g~~f~~l~~~------~~d~~~i  240 (345)
T KOG2234|consen  173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS------NVSLWIRNIQLYFFGILFNLLTIL------LQDGEAI  240 (345)
T ss_pred             cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHHHHHh------hcccccc
Confidence            1  2245779999999999999999999999999874      578899998888888765543221      1222222


Q ss_pred             hhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCC
Q 012821          340 PIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVAS  419 (456)
Q Consensus       340 ~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~  419 (456)
                      .   ++|+  |.|++          ...|+-++.|.+..+....++||.+++++..+.++.+.++.++....+   |  .
T Consensus       241 ~---~~gf--f~G~s----------~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf---~--~  300 (345)
T KOG2234|consen  241 N---EYGF--FYGYS----------SIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALF---D--F  300 (345)
T ss_pred             c---cCCc--ccccc----------HHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHc---c--C
Confidence            1   3444  55554          345677788889999999999999999999999988777766653222   2  2


Q ss_pred             CCchhhHHHHHHHHHhhhhccCCCCC
Q 012821          420 SLPTGFVAGAVILVMGLLIYSWTPTA  445 (456)
Q Consensus       420 ~~~~~~liG~vilv~G~liYn~~~~~  445 (456)
                      .++..+++|..+++..+.+|+..|..
T Consensus       301 ~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  301 QLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             CchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            35668899999999999999976664

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.87  E-value=1.1e-23  Score=202.69  Aligned_cols=272  Identities=20%  Similarity=0.192  Sum_probs=205.3

Q ss_pred             HhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhh
Q 012821          126 LLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGA  205 (456)
Q Consensus       126 ~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~  205 (456)
                      ++.+.|....-.+..+.-|-|-+|+...-..-.++|..+..+|+.       -.+..|+.|++.|+.|..+|.+..-|+.
T Consensus        28 L~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~~DVEaNy~vV~AyQ  100 (336)
T KOG2766|consen   28 LLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAFVDVEANYFVVKAYQ  100 (336)
T ss_pred             HHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeEEeecccEEEeeehh
Confidence            344555666666667778999999887722224455555555541       2455667799999999999999999999


Q ss_pred             hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCC-CCCcchHHHHHHHHHHHHHHH
Q 012821          206 ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS-LKGAGIFWSLLMIVSFLLQAA  284 (456)
Q Consensus       206 ~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s-~~~~~iig~lLiilS~i~~A~  284 (456)
                      ||+..+.++|++..||..+++||+|||.||++.|+.|+++|++|+++++.++-.+++. .+.|.+.|+.+++++.-++|+
T Consensus       101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaV  180 (336)
T KOG2766|consen  101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAV  180 (336)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeee
Confidence            9999999999999999999999999999999999999999999999999876433322 235778999999999999999


Q ss_pred             HHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcc
Q 012821          285 DTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAP  364 (456)
Q Consensus       285 ~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~  364 (456)
                      +||.||.+.|+        .|..++.|+.|+||.+++.+. +++...      +...-.||+                +.
T Consensus       181 SNv~EEflvkn--------~d~~elm~~lgLfGaIIsaIQ-~i~~~~------~~~tl~w~~----------------~i  229 (336)
T KOG2766|consen  181 SNVSEEFLVKN--------ADRVELMGFLGLFGAIISAIQ-FIFERH------HVSTLHWDS----------------AI  229 (336)
T ss_pred             ccccHHHHHhc--------CcHHHHHHHHHHHHHHHHHHH-Hhhhcc------ceeeEeehH----------------HH
Confidence            99999999986        456677899999999998887 443321      111111221                12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCC
Q 012821          365 LLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT  442 (456)
Q Consensus       365 ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~  442 (456)
                      ...+.|.++.++++-+...+.|..||+..++..--+   -.|...+  ..+|.+  ..|++++.|+.+..|.++|...
T Consensus       230 ~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTs---Dmwsl~i--~~FgYh--v~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  230 FLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTS---DMWSLLI--RTFGYH--VDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHH---HHHHHHH--HHHhcc--hhhhhHHHHHHHHHhhEEeecc
Confidence            233457777788999999999999999988854322   1222111  123554  6889999999999999999654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.2e-21  Score=188.74  Aligned_cols=291  Identities=18%  Similarity=0.186  Sum_probs=195.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH--HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHH
Q 012821          118 VIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL--ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL  195 (456)
Q Consensus       118 ~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~--m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l  195 (456)
                      .++++..+..|.+..+.+--...+.  +|-=.+..  .+|.|+.....+..-+..     .-+.++|.+.|++.....++
T Consensus         4 a~~ai~~vf~GCcsnvv~lE~L~~~--~pgsgNLITFaqFlFia~eGlif~skf~-----~~k~kiplk~Y~i~V~mFF~   76 (330)
T KOG1583|consen    4 AAAAISLVFGGCCSNVVFLELLVRN--EPGSGNLITFAQFLFIATEGLIFTSKFF-----TVKPKIPLKDYAITVAMFFI   76 (330)
T ss_pred             HHHHHHHHHHhhhchHHHHHHHHHh--CCCCeeehHHHHHHHHHHhceeeecccc-----ccCCCCchhhhheehheeee
Confidence            3456666777776555544333322  22222332  233344443332221211     12367888889998888999


Q ss_pred             HHHHHHHHhh-hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC----------CC
Q 012821          196 AAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH----------SL  264 (456)
Q Consensus       196 ~~~L~~ia~~-~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~----------s~  264 (456)
                      .|+.++.|+. ++|.|+|+++|++....||.++++++||||+..|+.+++++++|+++....++.+.+          ..
T Consensus        77 vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~  156 (330)
T KOG1583|consen   77 VNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQ  156 (330)
T ss_pred             eeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccc
Confidence            9999998885 599999999999999999999999999999999999999999999998542221110          11


Q ss_pred             CC--cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhh
Q 012821          265 KG--AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIY  342 (456)
Q Consensus       265 ~~--~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~  342 (456)
                      ++  .-.+|+.++.+|.+.+|..++|||.++++|+|||||.  +|+        .+   ++.+|.+..+.+    |+.+.
T Consensus       157 ~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~Ea--lFy--------tH---~LsLP~Flf~~~----div~~  219 (330)
T KOG1583|consen  157 SDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEA--LFY--------TH---FLSLPLFLFMGD----DIVSH  219 (330)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH--HHH--------HH---HhccchHHHhcc----hHHHH
Confidence            11  1257889999999999999999999999999998887  243        33   344666554321    23222


Q ss_pred             hhhhHHhhhccCC-CCCCCCCcchHHHHHHHHHHHHHHHHHHHH----hhhcHHHHHHHHHhhhhhhhhhccccccccCC
Q 012821          343 LRDGAACFLNLGT-LSSGCDGAPLLPLLFVLVNMGFNISLLHLL----KISSAIVSSLASTFSVPISVYVFTLPLPYLGV  417 (456)
Q Consensus       343 l~dg~~cf~g~~~-~~~~c~ga~ll~~lyii~ni~~N~~~~~v~----K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~  417 (456)
                          +.-+..... ..+..+......+.|+++|.++|..++.-+    .+.+|++.+++.++|. ....++++..  +  
T Consensus       220 ----~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRK-FvSLl~Siiy--F--  290 (330)
T KOG1583|consen  220 ----WRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRK-FVSLLFSIIY--F--  290 (330)
T ss_pred             ----HHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHH-HHHHhheeeE--e--
Confidence                222222211 122233333466899999999999976544    5678888888889996 3444444442  1  


Q ss_pred             CCCCchhhHHHHHHHHHhhhhccC
Q 012821          418 ASSLPTGFVAGAVILVMGLLIYSW  441 (456)
Q Consensus       418 ~~~~~~~~liG~vilv~G~liYn~  441 (456)
                      ++++.+.-.+|..+++.|+++|..
T Consensus       291 ~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  291 ENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344666677899999999999983

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.73  E-value=6.5e-16  Score=154.62  Aligned_cols=297  Identities=15%  Similarity=0.152  Sum_probs=196.0

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhh-HHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH
Q 012821          116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATF-GYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA  194 (456)
Q Consensus       116 ~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~-~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~  194 (456)
                      +...+.+..-.+.+.-++..|+..+. +++|.+++....+ +.+...   +.++....+ .++..+..+++.++.|++..
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~   76 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCL---LSWSSGLPK-RLKISSALLKLLLPVAIVHT   76 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHH---HHHHhCCCC-CCCCCHHHHHHHHHHHHHHH
Confidence            34556677777888888999998874 8999999988522 222211   111111100 00111112345678899988


Q ss_pred             HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHH
Q 012821          195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL  274 (456)
Q Consensus       195 l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lL  274 (456)
                      ....+.+.++.+++++..++++.+..+++++++++++|+|+++.+++|+++.++|+++..  +.+.     +....|+++
T Consensus        77 ~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~--~~~~-----~~~~~G~~~  149 (302)
T TIGR00817        77 IGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS--DTEL-----SFNWAGFLS  149 (302)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc--CCcc-----cccHHHHHH
Confidence            888899999999999999999999999999999999999999999999999999997643  1111     123678999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccC
Q 012821          275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLG  354 (456)
Q Consensus       275 iilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~  354 (456)
                      .++|.+..|+..++.++..+++      +.|++....|...++.+   .++|+.....+.+.  .++...+.    ....
T Consensus       150 ~l~a~~~~a~~~v~~k~~~~~~------~~~~~~~~~~~~~~~~~---~l~p~~~~~~~~~~--~~~~~~~~----~~~~  214 (302)
T TIGR00817       150 AMISNITFVSRNIFSKKAMTIK------SLDKTNLYAYISIMSLF---LLSPPAFITEGPPF--LPHGFMQA----ISGV  214 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhccC------CCCcccHHHHHHHHHHH---HHHHHHHHHcchHH--HHHHHHHh----hccc
Confidence            9999999999999999877632      35666666655555543   23454321111110  01000000    0000


Q ss_pred             CCCCCCCCcch-HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHH
Q 012821          355 TLSSGCDGAPL-LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILV  433 (456)
Q Consensus       355 ~~~~~c~ga~l-l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv  433 (456)
                      ..    +.... .......+..++|.+....+|+.||++.++...+. |+...+++..+  .||  +.+..+++|.++++
T Consensus       215 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~--lge--~lt~~~~~G~~lil  285 (302)
T TIGR00817       215 NV----TKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILF--FGT--KISPQQVFGTGIAI  285 (302)
T ss_pred             Cc----hHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhh--cCC--CCchhHHHHHHHHH
Confidence            00    00000 11112224446777777889999999999998777 66665555443  466  48889999999999


Q ss_pred             HhhhhccCCCCCCCC
Q 012821          434 MGLLIYSWTPTASPS  448 (456)
Q Consensus       434 ~G~liYn~~~~~~~~  448 (456)
                      .|+++|+..+.+++.
T Consensus       286 ~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       286 AGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHHHHHHhccCcC
Confidence            999999976554443

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.72  E-value=1.3e-15  Score=156.38  Aligned_cols=304  Identities=13%  Similarity=0.094  Sum_probs=199.8

Q ss_pred             CcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccc-ccccCCCchhhHHH
Q 012821          112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTD-EMLSMPKAPFVAVG  190 (456)
Q Consensus       112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~-e~~~~p~~~f~i~a  190 (456)
                      +.++++.+++++--.+.+.-.+..|+..+. ++||++++....+.-.+........++++  .++ +..+..+++.+.+|
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRK--IPRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999998876 67999999985333221111111111111  010 00112334577889


Q ss_pred             HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchH
Q 012821          191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIF  270 (456)
Q Consensus       191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~ii  270 (456)
                      +|........++|..+++++..++++.+..++|++++++++|+|+++.+++|++++++|++++...+.       +..+.
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~  194 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWL  194 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHH
Confidence            99988888888999999999999999999999999999999999999999999999999999764211       12367


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhh
Q 012821          271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACF  350 (456)
Q Consensus       271 g~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf  350 (456)
                      |.++.++|.+..|+.+++-++..++++. +.++.+....-.+...++++   +++|+.....+.   +..... +..  .
T Consensus       195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~l---~~lp~~~~~e~~---~~~~~~-~~~--~  264 (350)
T PTZ00343        195 AFWCAMLSNLGSSLRSIFAKKTMKNKSE-IGENLTASNIYMLLTLIASL---ISLPLVLFFEGK---KWVPVW-TNY--T  264 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccc-ccccCCHHHHHHHHHHHHHH---HHHHHHHHHhhH---HHHHHH-HHh--h
Confidence            8999999999999999999998876521 00123322111111223332   345553211100   000100 000  0


Q ss_pred             hccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHH
Q 012821          351 LNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAV  430 (456)
Q Consensus       351 ~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~v  430 (456)
                      .......  ........+...+...++|.+....+|+.|+++.++...++ |+..++++..+  .|+  +.++.+++|.+
T Consensus       265 ~~~~~~~--~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk-~V~~iv~s~l~--~ge--~lt~~~~iG~~  337 (350)
T PTZ00343        265 ANMTNYT--KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK-RVVIIVSSIII--FQT--QVTLLGYLGMA  337 (350)
T ss_pred             hcccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-HHHHhhhhHHH--hCC--CCchHhHHHHH
Confidence            0000000  00000122233445567888888899999999999999988 55565555443  354  48889999999


Q ss_pred             HHHHhhhhccCC
Q 012821          431 ILVMGLLIYSWT  442 (456)
Q Consensus       431 ilv~G~liYn~~  442 (456)
                      +++.|+++|+..
T Consensus       338 lii~Gv~lYs~~  349 (350)
T PTZ00343        338 VAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHhhc
Confidence            999999999864

>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT)

Probab=99.58  E-value=1.5e-15  Score=132.12  Aligned_cols=81  Identities=41%  Similarity=0.742  Sum_probs=76.0

Q ss_pred             ccCCCcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHH-HHhcCCcccccccCCCchh
Q 012821          108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAPF  186 (456)
Q Consensus       108 ~~~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~-~~~~~~i~~e~~~~p~~~f  186 (456)
                      .+-.+++.++++++++|++.|++|+|++|++..+|.|||||++|+.++||+++||+++++ +|+++.+++||+++|+++|
T Consensus        49 ~s~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyKF  128 (130)
T PF08627_consen   49 QSYSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYKF  128 (130)
T ss_pred             HhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCccccc
Confidence            445688999999999999999999999999999999999999999999999999999876 5889999999999999999


Q ss_pred             hH
Q 012821          187 VA  188 (456)
Q Consensus       187 ~i  188 (456)
                      ++
T Consensus       129 aI  130 (130)
T PF08627_consen  129 AI  130 (130)
T ss_pred             cC
Confidence            74

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.50  E-value=5.6e-13  Score=134.87  Aligned_cols=298  Identities=20%  Similarity=0.267  Sum_probs=204.0

Q ss_pred             cchHHHHHHHHHHHhhhhHHHHHHHHhCc-CCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHH
Q 012821          113 RRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL  191 (456)
Q Consensus       113 ~~~~v~il~~~~v~~G~~N~V~~K~~~~~-~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~al  191 (456)
                      +.....+....-.++.++..+..|+..++ .|+||++++..+++.=.+.+...-..+..+.  .+-..+.+++..+.+|+
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~--~~~~~~~~~~~llpl~~   91 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP--SKISSKLPLRTLLPLGL   91 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--CccccccchHHHHHHHH
Confidence            44555566677777888888889988886 8999999999963332322221111121111  11114466777889999


Q ss_pred             HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHH
Q 012821          192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFW  271 (456)
Q Consensus       192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig  271 (456)
                      +..++.++++.++.++|.+-.|+...+..|+|.++++++.+++|++.-++.++.++.|+.+......       +..+.|
T Consensus        92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G  164 (316)
T KOG1441|consen   92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFG  164 (316)
T ss_pred             HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHH
Confidence            9999999999999999999999999999999999999999999999999999999999998765111       123788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhh
Q 012821          272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFL  351 (456)
Q Consensus       272 ~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~  351 (456)
                      .+..++|.+..++++++.|+.+++.    ++++|...+-...+-.+++  ++++|......+.         .. . ++.
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~ll~y~ap~s~~--~Ll~P~~~~~~~~---------~~-~-~~~  227 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSK----GESLNSMNLLYYTAPISLI--FLLIPFLDYVEGN---------KF-V-GFL  227 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHHHHHhhhHHHH--HHhcchHhhhccc---------ce-e-eee
Confidence            8899999999999999999999642    1235433322222222222  1223654322110         00 0 110


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhcc-ccccccCCCCCCchhhHHHHH
Q 012821          352 NLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFT-LPLPYLGVASSLPTGFVAGAV  430 (456)
Q Consensus       352 g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~-l~~~~~G~~~~~~~~~liG~v  430 (456)
                      . .+.  +- +...+ ++--++..+.|++...++.+.||++.+++..++.. .+++.+ +.|   ++  +.++.++.|..
T Consensus       228 ~-~~~--~~-~~~~~-~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~-~vi~~s~~iF---~~--pvt~~n~~G~~  296 (316)
T KOG1441|consen  228 T-APW--FV-TFLIL-LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRI-VVIVVSWLIF---GN--PVTFLNALGYA  296 (316)
T ss_pred             c-ccc--ch-hhHHH-HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEE-EEEEeEeeee---cC--CCchhhHHHHH
Confidence            0 000  00 01111 11125667899999999999999999999988864 444444 333   44  57889999999


Q ss_pred             HHHHhhhhccCCCCCCC
Q 012821          431 ILVMGLLIYSWTPTASP  447 (456)
Q Consensus       431 ilv~G~liYn~~~~~~~  447 (456)
                      +=++|+++|+..+.+..
T Consensus       297 iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  297 IAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHHHHHHHHHhhhhh
Confidence            99999999998765544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.43  E-value=6.5e-12  Score=124.61  Aligned_cols=265  Identities=15%  Similarity=0.171  Sum_probs=192.0

Q ss_pred             cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhH
Q 012821          141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFL  220 (456)
Q Consensus       141 ~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~I  220 (456)
                      ..|+||-|+.....++..++-...  .+.++.   +.+.+.|+|+|...++-..+++.+++-|+-|++=|.+.+-..+.+
T Consensus        46 ~rF~~~~fL~~~q~l~~~~~s~~~--l~~~k~---~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKm  120 (327)
T KOG1581|consen   46 ERFEHSLFLVFCQRLVALLVSYAM--LKWWKK---ELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKM  120 (327)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHH--Hhcccc---cCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhh
Confidence            358999999999877777666333  222221   134467899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012821          221 VWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG--HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQ  298 (456)
Q Consensus       221 p~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~--~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~  298 (456)
                      +-+|++..+.-||||+.++++.++++.+|+.+-...+++++  ++..++.+.|.+|+.....+.++-+..|.++|++|  
T Consensus       121 IPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~--  198 (327)
T KOG1581|consen  121 IPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY--  198 (327)
T ss_pred             hHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC--
Confidence            99999999999999999999999999999988765433332  22345789999999999999999999999999987  


Q ss_pred             hhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHH
Q 012821          299 RLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFN  378 (456)
Q Consensus       299 ~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N  378 (456)
                          ++..+.+.....+|.+++..+-+    ...|.        +.++.. |....+   +|   +.-..+|-.+++..|
T Consensus       199 ----k~s~~~mM~~vNLf~~i~~~~~l----i~qg~--------~~~av~-F~~~hp---~~---~~Di~l~s~~gavGQ  255 (327)
T KOG1581|consen  199 ----KVSSLHMMFGVNLFSAILNGTYL----ILQGH--------LLPAVS-FIKEHP---DV---AFDILLYSTCGAVGQ  255 (327)
T ss_pred             ----CccHhHHHHHHHHHHHHHHHHhh----hcCCC--------CchHHH-HHHcCh---hH---HHHHHHHHHhhhhhh
Confidence                44444444444555554433210    01110        011110 111111   11   223467888889999


Q ss_pred             HHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821          379 ISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS  440 (456)
Q Consensus       379 ~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn  440 (456)
                      .+..+-++.-++++...+++.|...++.+.++.+   |+  +..+.|..|..+++.|+.+=.
T Consensus       256 ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f---~h--~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  256 LFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVF---GH--PLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             heehhhHhhcccHHHHHHHHHHHHHHHHHHHHHh---CC--ccchhhccCeeeehHHHHHHH
Confidence            9999888988999999999999766666655554   33  467788888877766655433

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.39  E-value=8e-11  Score=121.69  Aligned_cols=298  Identities=13%  Similarity=0.161  Sum_probs=176.9

Q ss_pred             cchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH-HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHH
Q 012821          113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL-ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL  191 (456)
Q Consensus       113 ~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~-m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~al  191 (456)
                      |+.+.....+++-+.-....++.|...+.-- .|+..... ..++.++. +.+.+.+.+....++.. ...+.++++.|+
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~-~~~~~~~~R~~iA~l~L-l~~~~~~~~~~~~~~~~-~~~~~~l~l~g~   86 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGL-NIYPFLGYSYLLASLLL-LPSLFFTNRSRSLPPLS-VSILSKIGLLGF   86 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCC-CccHHHHHHHHHHHHHH-HHHHHHHHHhcccCcch-HHHHHHHHHHHH
Confidence            4556666666666666677888888885422 22322222 22222222 22222332211111100 001134566777


Q ss_pred             HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHH------hcCcccchhhhHHHHHhhheeeEEecCCCC-----
Q 012821          192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP-----  260 (456)
Q Consensus       192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iF------LkrRy~~~q~lGv~lVi~Gviivv~sg~~~-----  260 (456)
                      +-.+...+.+.|+.++++..-.++..+.-++|++++++|      +|+|.++.|++|+++.++|+.++...+...     
T Consensus        87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~  166 (358)
T PLN00411         87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVAS  166 (358)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence            665555678899999999999999999999999999999      699999999999999999998765321110     


Q ss_pred             ----------C--CCC-CCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhh
Q 012821          261 ----------G--HSL-KGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPF  327 (456)
Q Consensus       261 ----------~--~s~-~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~  327 (456)
                                .  ... .+..++|+++.++|++..|+.++++.+..++|       .+......|.++++.+...  +|.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~-------~~~~~~t~~~~~~~~~~~~--~~~  237 (358)
T PLN00411        167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY-------PAAFTVSFLYTVCVSIVTS--MIG  237 (358)
T ss_pred             ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CcHhHHHHHHHHHHHHHHH--HHH
Confidence                      0  001 11225688999999999999999999988776       2223333343333322111  111


Q ss_pred             hhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHH-HHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhh
Q 012821          328 LSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVL-VNMGFNISLLHLLKISSAIVSSLASTFSVPISVY  406 (456)
Q Consensus       328 ~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii-~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~  406 (456)
                      .. ..+.+.   .... .             .- ....+.++|.. +..+.+.+-...+|+.++...++...+. |+...
T Consensus       238 l~-~~~~~~---~~~~-~-------------~~-~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~-PV~a~  297 (358)
T PLN00411        238 LV-VEKNNP---SVWI-I-------------HF-DITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLS-ILIAV  297 (358)
T ss_pred             HH-HccCCc---ccce-e-------------cc-chHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHH-HHHHH
Confidence            11 100000   0000 0             00 00112233322 1223444555677899998888877766 66666


Q ss_pred             hccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCCCC
Q 012821          407 VFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTAS  446 (456)
Q Consensus       407 ~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~~~  446 (456)
                      +++..+  +||.  +++.+++|.++++.|+.+-.+++.++
T Consensus       298 llg~l~--LgE~--lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        298 VMGAIF--LNDS--LYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHH--hCCC--CcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            655444  4664  88899999999999999988764433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.32  E-value=7e-11  Score=120.09  Aligned_cols=237  Identities=22%  Similarity=0.262  Sum_probs=165.1

Q ss_pred             hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCC-CC
Q 012821          187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS-LK  265 (456)
Q Consensus       187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s-~~  265 (456)
                      +..+.+=++++...+.|+.+|+.++..++..+.=.||+.++.+|.+.|+++.+.+++++.+.|++++...++.+.++ ..
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a  242 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA  242 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence            45566778899999999999999999999999999999999999999999999999999999999998866543222 12


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhh
Q 012821          266 GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRD  345 (456)
Q Consensus       266 ~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~d  345 (456)
                      .....|+++-++|++.+|.-.|.--+...+++    +++|+-.+-|++|+|-+++..+.+-++... +.|--++|.... 
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg----~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q-  316 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEG----ERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQ-  316 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccccc----ccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCce-
Confidence            34589999999999999999888777666642    247776667888998887554322121222 222223433211 


Q ss_pred             hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821          346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF  425 (456)
Q Consensus       346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~  425 (456)
                       +.|                ..+...+.+++--.+=..-+-..|.++.++.+++.+||+.++=. .+  .|  ...++.+
T Consensus       317 -~~~----------------vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~-l~--k~--~~~S~~~  374 (416)
T KOG2765|consen  317 -FSL----------------VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADV-LI--KG--KHPSALY  374 (416)
T ss_pred             -eEe----------------eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHH-HH--cC--CCCCHHH
Confidence             000                11111122222122212222346888889999999998876533 22  23  3467799


Q ss_pred             HHHHHHHHHhhhhccCCCCCCCCCCC
Q 012821          426 VAGAVILVMGLLIYSWTPTASPSSAC  451 (456)
Q Consensus       426 liG~vilv~G~liYn~~~~~~~~~~~  451 (456)
                      ++|.+-++.|.++=|...+..+.+.+
T Consensus       375 iiGsi~Ifv~Fv~vn~~~~~~~~~~~  400 (416)
T KOG2765|consen  375 IIGSIPIFVGFVIVNISSENSKKDPL  400 (416)
T ss_pred             HHHHHHHHHHHhheeccccccccccc
Confidence            99999999999999987666555543

>TIGR00803 nst UDP-galactose transporter

Probab=99.23  E-value=8.5e-11  Score=112.87  Aligned_cols=221  Identities=17%  Similarity=0.165  Sum_probs=154.2

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCC
Q 012821          186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK  265 (456)
Q Consensus       186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~  265 (456)
                      ..+|+...+.++.+..+++....+.-.+.. |..+..+++++...++|+++..||.+......|+.++......+.....
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~   80 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF   80 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence            457889999999999999999888889988 9999999999999999999999999998888888876543222111112


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhh
Q 012821          266 GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRD  345 (456)
Q Consensus       266 ~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~d  345 (456)
                      ++.+.+..+++.+++..++..+|+|+.+|++      +..     .|+..++.-+..+...+..... .+.         
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------~~~-----~~~~~~~l~~~~~~~~~~~~~~-~~~---------  139 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDG------DTM-----FWSRNLQLPLFGLFSTFSVLLW-SDG---------  139 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcccCC------CCc-----hHHHHHHHHHHHHHHHHHHHhh-ccc---------
Confidence            3456777888899999999999999987764      222     2333333321111100100000 000         


Q ss_pred             hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821          346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF  425 (456)
Q Consensus       346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~  425 (456)
                       -.+ .+.    +.+++-+...+..++.+...+++...++|+.|+++.+++.++|..++..+..+.|   |+  +++..+
T Consensus       140 -~~~-~~~----~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f---~~--~ls~~~  208 (222)
T TIGR00803       140 -TLI-SNF----GFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLF---DA--KISSTF  208 (222)
T ss_pred             -chh-hcc----CcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHh---cC--CccHHH
Confidence             000 000    0122334455666677778888899999999999999999999776666654443   43  477889


Q ss_pred             HHHHHHHHHhhhhc
Q 012821          426 VAGAVILVMGLLIY  439 (456)
Q Consensus       426 liG~vilv~G~liY  439 (456)
                      ++|..+++.|+.+|
T Consensus       209 ~~g~~lV~~~~~lY  222 (222)
T TIGR00803       209 YLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHeeeEeC
Confidence            99999999999988

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.20  E-value=2.7e-09  Score=103.68  Aligned_cols=213  Identities=20%  Similarity=0.145  Sum_probs=143.3

Q ss_pred             chhhHHHH-HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC
Q 012821          184 APFVAVGL-LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH  262 (456)
Q Consensus       184 ~~f~i~al-lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~  262 (456)
                      +++++.|. +..+...+.+.|..+++.+.-.++.+..-+++++++.+|+|+|.++.||.|+.+.++|++++...+..   
T Consensus        47 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~---  123 (260)
T TIGR00950        47 LRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL---  123 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---
Confidence            34455554 56777788889999999999999999999999999999999999999999999999999887643211   


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhh
Q 012821          263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIY  342 (456)
Q Consensus       263 s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~  342 (456)
                         +....|.++.++|.+..+..+++.-+..+++      +++....+.|....+.+   .++|..... +.+.. .  .
T Consensus       124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~---~l~~~~~~~-~~~~~-~--~  187 (260)
T TIGR00950       124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKE------GPELLQFTGWVLLLGAL---LLLPFAWFL-GPNPQ-A--L  187 (260)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcC------CchHHHHHHHHHHHHHH---HHHHHHHhc-CCCCC-c--c
Confidence               1235788999999999999999988776543      32223333333333332   234442211 11110 0  0


Q ss_pred             hhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCc
Q 012821          343 LRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLP  422 (456)
Q Consensus       343 l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~  422 (456)
                      ..+ +                .....+.++...+.+.+-...+|+.++...++..... |+...+++..+  .+|  +.+
T Consensus       188 ~~~-~----------------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~-pv~~~ll~~~~--~~E--~~~  245 (260)
T TIGR00950       188 SLQ-W----------------GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAE-PLVALLLGLLI--LGE--TLS  245 (260)
T ss_pred             hHH-H----------------HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH-HHHHHHHHHHH--hCC--CCC
Confidence            000 0                0012233344455666667778999999999988877 55555555443  344  477


Q ss_pred             hhhHHHHHHHHHhhh
Q 012821          423 TGFVAGAVILVMGLL  437 (456)
Q Consensus       423 ~~~liG~vilv~G~l  437 (456)
                      ..+++|.++++.|++
T Consensus       246 ~~~~~G~~li~~g~~  260 (260)
T TIGR00950       246 LPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            889999999998863

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.13  E-value=1.7e-09  Score=106.15  Aligned_cols=292  Identities=15%  Similarity=0.215  Sum_probs=190.7

Q ss_pred             CcchHHHHHHHHHHHhhhhHHHHHHHHhCc--CCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHH
Q 012821          112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP--LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV  189 (456)
Q Consensus       112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~--~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~  189 (456)
                      .+-.+..++.....+.=..|..+.-+..+.  +..|-|+++...++.|..+....     .. .++.+++.+||+.|.+.
T Consensus        39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie-----~~-~~~~k~r~iP~rtY~~l  112 (367)
T KOG1582|consen   39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIE-----LQ-LIQTKRRVIPWRTYVIL  112 (367)
T ss_pred             chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheE-----EE-eecccceecchhHhhhh
Confidence            344455666555555556677777766654  44588999999877775543321     11 13445678999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcch
Q 012821          190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI  269 (456)
Q Consensus       190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~i  269 (456)
                      +++-+-.--|.+-.+.|+.=|.|.|+.+..++=.|+-+.++=||||.++.+.++.+..+|++.-.+.+++.+   .+..+
T Consensus       113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s---PNF~~  189 (367)
T KOG1582|consen  113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS---PNFNL  189 (367)
T ss_pred             HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC---CCcce
Confidence            998887777777777889999999999999999999999999999999999999999999998765544332   23457


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCC-CC-eeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhH
Q 012821          270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VD-LFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGA  347 (456)
Q Consensus       270 ig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~-~~-lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~  347 (456)
                      +|.+++-.|-+..|+-+=+|||.+|++..    . .. +|+--+    .|+  .+++.|+.-  .|.-+       ...-
T Consensus       190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~----ss~EmvfySy~----iG~--vflf~~mvl--Tge~f-------~a~~  250 (367)
T KOG1582|consen  190 IGVMMISGALLADAVIGNVQEKAMKMNPA----SSSEMVFYSYG----IGF--VFLFAPMVL--TGELF-------SAWT  250 (367)
T ss_pred             eeHHHHHHHHHHHHHhhHHHHHHHhhCCC----CcceEEEeeec----ccH--HHHHHHHHh--cccch-------hhhH
Confidence            88888889999999999999999998722    2 22 222111    122  223334321  12111       1111


Q ss_pred             HhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHH
Q 012821          348 ACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVA  427 (456)
Q Consensus       348 ~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~li  427 (456)
                      .|..+--..       --..+++...-.+...+++.++|..+|.+...+.+.|..+++.+..+.|     ..++.-..+-
T Consensus       251 fcaehp~~t-------yGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllF-----sKPfT~qy~~  318 (367)
T KOG1582|consen  251 FCAEHPVRT-------YGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLF-----SKPFTEQYVW  318 (367)
T ss_pred             HHHhCcHhH-------HHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHH-----cCchHHHHhh
Confidence            232211000       0022333344445667778888999999999998888655555444444     1112334455


Q ss_pred             HHHHHHHhhhhccCCC
Q 012821          428 GAVILVMGLLIYSWTP  443 (456)
Q Consensus       428 G~vilv~G~liYn~~~  443 (456)
                      |..++++|+++=-+..
T Consensus       319 ~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  319 SGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hhHHHHHHHHhhcccC
Confidence            6677888988744433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.09  E-value=6.8e-08  Score=96.61  Aligned_cols=274  Identities=15%  Similarity=0.139  Sum_probs=162.7

Q ss_pred             HHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHH-HHHHH
Q 012821          120 AAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE-ALAAA  198 (456)
Q Consensus       120 l~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD-~l~~~  198 (456)
                      +.+++.+.=..|-+..|...+.+  -|+..+..=.+.-.++.+.+...  ++++.+   .+..+....+.|.+- .....
T Consensus        12 ~~~~~~~iWg~~~~~~K~~~~~~--~p~~~~~~R~~~a~l~ll~~~~~--~~~~~~---~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         12 ALFALYIIWGSTYLVIRIGVESW--PPLMMAGVRFLIAGILLLAFLLL--RGHPLP---TLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHhhHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHH--hCCCCC---cHHHHHHHHHHHHHHHHHHHH
Confidence            34444444555999999887743  34433333211112222222222  111111   111223345566554 45566


Q ss_pred             HHHHHh-hhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHH
Q 012821          199 TGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV  277 (456)
Q Consensus       199 L~~ia~-~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiil  277 (456)
                      +.+.+. .+++.+.-.++..+.-+++++++.+ +|+|++++||+|+++.++|+.++...+..  +    ....|+++.++
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--~----~~~~G~l~~l~  157 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--S----GNPWGAILILI  157 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--c----cchHHHHHHHH
Confidence            777887 8898888889999999999999985 69999999999999999998876432111  1    12468899999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHH-HhhhhhcccCCCCCCchhhhhhhHHhhhccCCC
Q 012821          278 SFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICL-LLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTL  356 (456)
Q Consensus       278 S~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~l-llP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~  356 (456)
                      |.+..|+.+++.++.-++       + +.     ....+|..+..+ ++|+.. ..+.+....++ .++ +         
T Consensus       158 a~~~~a~~~~~~~~~~~~-------~-~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~---------  212 (292)
T PRK11272        158 ASASWAFGSVWSSRLPLP-------V-GM-----MAGAAEMLAAGVVLLIASL-LSGERLTALPT-LSG-F---------  212 (292)
T ss_pred             HHHHHHHHHHHHHhcCCC-------c-ch-----HHHHHHHHHHHHHHHHHHH-HcCCcccccCC-HHH-H---------
Confidence            999999999998874321       1 11     123344443332 333322 11111110000 000 0         


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhh
Q 012821          357 SSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGL  436 (456)
Q Consensus       357 ~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~  436 (456)
                             ..+..+.++...+.+.+-...+|+.++...++...+. |+...+++..+  .||  +.+..+++|.++++.|+
T Consensus       213 -------~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~-Pi~a~i~~~~~--l~E--~~t~~~iiG~~lIi~gv  280 (292)
T PRK11272        213 -------LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVN-PVVAVLLGTGL--GGE--TLSPIEWLALGVIVFAV  280 (292)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH-HHHHHHHHHHH--cCC--CCcHHHHHHHHHHHHHH
Confidence                   0112223334456666777788999998888887766 55555444333  355  47888999999999999


Q ss_pred             hhccCCCC
Q 012821          437 LIYSWTPT  444 (456)
Q Consensus       437 liYn~~~~  444 (456)
                      ++-+..+.
T Consensus       281 ~~~~~~~~  288 (292)
T PRK11272        281 VLVTLGKY  288 (292)
T ss_pred             HHHHHHHh
Confidence            99877544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.07  E-value=9.2e-08  Score=96.01  Aligned_cols=213  Identities=16%  Similarity=0.167  Sum_probs=131.0

Q ss_pred             HHHHHhhh-cchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHH
Q 012821          199 TGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV  277 (456)
Q Consensus       199 L~~ia~~~-ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiil  277 (456)
                      +.+.+..+ +|.+.-.++.++..+++++++++++|+|++++||+|+++.++|+.+....+.++    .+....|+++.++
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~----~~~~~~G~~l~l~  150 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG----QHVAMLGFMLTLA  150 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC----cchhHHHHHHHHH
Confidence            44566666 577777888888889999999999999999999999999999988776332111    1123568999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCC
Q 012821          278 SFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLS  357 (456)
Q Consensus       278 S~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~  357 (456)
                      |.+..|..+++..+..+++     +.++......|....+.+   ++.+......+ +. ...+..       ...    
T Consensus       151 aal~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~-~~~~~~-------~~~----  209 (299)
T PRK11453        151 AAFSWACGNIFNKKIMSHS-----TRPAVMSLVVWSALIPII---PFFVASLILDG-SA-TMIHSL-------VTI----  209 (299)
T ss_pred             HHHHHHHHHHHHHHHhccc-----CccchhHHHHHHHHHHHH---HHHHHHHHhcC-ch-hhhhhh-------ccC----
Confidence            9999999999999865543     112222222222222221   11111000011 00 000000       000    


Q ss_pred             CCCCCcchHHHHH--HHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHh
Q 012821          358 SGCDGAPLLPLLF--VLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMG  435 (456)
Q Consensus       358 ~~c~ga~ll~~ly--ii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G  435 (456)
                         +...+..++|  ++...+-+.+-....|+.++...++...+. |+...++...+  .||.  +++.+++|.++++.|
T Consensus       210 ---~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~-Pv~a~~~~~l~--lgE~--~~~~~~iG~~lI~~g  281 (299)
T PRK11453        210 ---DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLV-PVVGLASAALL--LDER--LTGLQFLGAVLIMAG  281 (299)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHHHHH--hCCC--ccHHHHHHHHHHHHH
Confidence               0001122334  334445555666677888888777766655 77666666443  4654  788999999999999


Q ss_pred             hhhccCCCC
Q 012821          436 LLIYSWTPT  444 (456)
Q Consensus       436 ~liYn~~~~  444 (456)
                      +++=.++.+
T Consensus       282 v~l~~~~~~  290 (299)
T PRK11453        282 LYINVFGLR  290 (299)
T ss_pred             HHHHhcchh
Confidence            987655443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.05  E-value=1.9e-07  Score=90.86  Aligned_cols=269  Identities=25%  Similarity=0.243  Sum_probs=159.7

Q ss_pred             HhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCch-hhHHHHHHHHHHHHHHHHh
Q 012821          126 LLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAP-FVAVGLLEALAAATGMAAG  204 (456)
Q Consensus       126 ~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~-f~i~allD~l~~~L~~ia~  204 (456)
                      +....+....|...+.  +.|++......+......  .+...++.. ......+.++++ ...-+++......+.+.+.
T Consensus        17 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (292)
T COG0697          17 LLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL--LLPLLLLEP-RGLRPALRPWLLLLLLALLGLALPFLLLFLAL   91 (292)
T ss_pred             HHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH--HHHHHHhhc-ccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455566666666665  566666555322222222  111222211 001111222233 3445566777777778889


Q ss_pred             hhcchhHHHHhcchhHHHHHHHHH-HHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHHHHHHHH
Q 012821          205 AILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA  283 (456)
Q Consensus       205 ~~ts~s~~~mLrq~~Ip~T~llS~-iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiilS~i~~A  283 (456)
                      .+++.+...++..+..+++.+++. +++|+|.++.+|.|.++..+|++++..++..+...    ...|.++.+++.+..|
T Consensus        92 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~----~~~g~~~~l~a~~~~a  167 (292)
T COG0697          92 KYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL----SLLGLLLALAAALLWA  167 (292)
T ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH----HHHHHHHHHHHHHHHH
Confidence            999999999999999999999996 77799999999999999999999988654332110    4678899999999999


Q ss_pred             HHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHH-HHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCC
Q 012821          284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQAL-FICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDG  362 (456)
Q Consensus       284 ~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i-~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~g  362 (456)
                      +..++.++.. ++      +  ......+   ++.+ ...+.+|......  +   .+....+ .               
T Consensus       168 ~~~~~~~~~~-~~------~--~~~~~~~---~~~~~~~~~~~~~~~~~~--~---~~~~~~~-~---------------  214 (292)
T COG0697         168 LYTALVKRLS-RL------G--PVTLALL---LQLLLALLLLLLFFLSGF--G---APILSRA-W---------------  214 (292)
T ss_pred             HHHHHHHHhc-CC------C--hHHHHHH---HHHHHHHHHHHHHHhccc--c---ccCCHHH-H---------------
Confidence            9999999877 32      1  1111111   3332 1112222211100  0   0000000 0               


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCC
Q 012821          363 APLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT  442 (456)
Q Consensus       363 a~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~  442 (456)
                       .....+.++.....+.+-....+..++...+...... |+....+...+  .||  .....+++|.++++.|.++.+..
T Consensus       215 -~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~l~--~~e--~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         215 -LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLE-PVFAALLGVLL--LGE--PLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHHHHHH--hCC--CCcHHHHHHHHHHHHHHHHHhcc
Confidence             0111222222224555666677888887777766444 33333323222  244  46778999999999999999876

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.01  E-value=2.7e-07  Score=92.52  Aligned_cols=266  Identities=14%  Similarity=0.041  Sum_probs=156.1

Q ss_pred             HHHhhhhHHHHHHHHhCcCCChhHHHHHHH-hhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH-HHHHHHH
Q 012821          124 TVLLGVGNRVLYKLALVPLKHYPFFLAQLA-TFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGM  201 (456)
Q Consensus       124 ~v~~G~~N~V~~K~~~~~~f~yPff~~~~m-~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~-l~~~L~~  201 (456)
                      -.+.=..|-+..|...+.  -.|+.++..= .++.++. +.   ++.++    + .++. +++..+.+.+-. ....+.+
T Consensus        12 a~~~Wg~~~~~~k~~~~~--~~P~~~~~~R~~~a~l~l-~~---~~~~~----~-~~~~-~~~~~~~~~l~~~~~~~~~~   79 (295)
T PRK11689         12 AILLWSTMVGLIRGVSES--LGPVGGAAMIYSVSGLLL-LL---TVGFP----R-LRQF-PKRYLLAGGLLFVSYEICLA   79 (295)
T ss_pred             HHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHH-HH---Hcccc----c-cccc-cHHHHHHHhHHHHHHHHHHH
Confidence            333345678888887765  3566666553 2222222 11   11111    1 1122 234455555533 3333444


Q ss_pred             HHhh----hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCC--C--CCCCcchHHHH
Q 012821          202 AAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG--H--SLKGAGIFWSL  273 (456)
Q Consensus       202 ia~~----~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~--~--s~~~~~iig~l  273 (456)
                      .|..    .+++..-.++..+.-+++++++++++|+|.++.||+|+++.++|+.+...++.+.+  +  ........|++
T Consensus        80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~  159 (295)
T PRK11689         80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG  159 (295)
T ss_pred             HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence            5554    35555667888888999999999999999999999999999999988764432110  0  00012346889


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhcc
Q 012821          274 LMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNL  353 (456)
Q Consensus       274 LiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~  353 (456)
                      +.++|.++.|+.+++-++.-+++        |....      ++......+.+... ..+.+..+..   .+.+      
T Consensus       160 ~~l~aa~~~A~~~v~~k~~~~~~--------~~~~~------~~~~~~~~l~~~~~-~~~~~~~~~~---~~~~------  215 (295)
T PRK11689        160 LAFIGAFIWAAYCNVTRKYARGK--------NGITL------FFILTALALWIKYF-LSPQPAMVFS---LPAI------  215 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCC--------CchhH------HHHHHHHHHHHHHH-HhcCccccCC---HHHH------
Confidence            99999999999999999964432        32221      11111112222111 1111100000   0111      


Q ss_pred             CCCCCCCCCcchHHHHHH-HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHH
Q 012821          354 GTLSSGCDGAPLLPLLFV-LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVIL  432 (456)
Q Consensus       354 ~~~~~~c~ga~ll~~lyi-i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vil  432 (456)
                                  ..++|. +...+.+.+-...+|+.++...++...+. |+...++...+  .||.  .++.+++|.+++
T Consensus       216 ------------~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~i~~~~~--lgE~--~~~~~~iG~~lI  278 (295)
T PRK11689        216 ------------IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFT-PVLSAALAALL--LSTP--LSFSFWQGVAMV  278 (295)
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhH-HHHHHHHHHHH--hCCC--CcHHHHHHHHHH
Confidence                        112222 23345677777888999999999887766 67666666544  4554  788999999999


Q ss_pred             HHhhhhccCC
Q 012821          433 VMGLLIYSWT  442 (456)
Q Consensus       433 v~G~liYn~~  442 (456)
                      +.|+++-.+.
T Consensus       279 ~~gv~~~~~~  288 (295)
T PRK11689        279 TAGSLLCWLA  288 (295)
T ss_pred             HHhHHHHhhh
Confidence            9998766543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.91  E-value=1.4e-07  Score=94.54  Aligned_cols=207  Identities=12%  Similarity=0.085  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCc
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA  267 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~  267 (456)
                      .-+++-..+..+.+.|..++|.+.-.++..+.-+++++++++|+|+|.++.||+|+++.++|++++..++  + +    .
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~--~-~----~  150 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF--G-S----L  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc--C-C----c
Confidence            3345566677888899999999999999999999999999999999999999999999999998865321  1 0    1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHH-hhhhhcccCCCCCCchhhhhhh
Q 012821          268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-LPFLSKLWGIPFSQLPIYLRDG  346 (456)
Q Consensus       268 ~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~ll-lP~~~~~~g~~~~~~~~~l~dg  346 (456)
                          ..+.++|.+..|+..++.++.-++      +..+.+    ....++..+..+. +|...    .+..+..   .+.
T Consensus       151 ----~~~~l~aa~~~a~~~i~~r~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~  209 (296)
T PRK15430        151 ----PIIALGLAFSFAFYGLVRKKIAVE------AQTGML----IETMWLLPVAAIYLFAIAD----SSTSHMG---QNP  209 (296)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHhcCCC------CchhHH----HHHHHHHHHHHHHHHHHcc----CCccccc---CCc
Confidence                135667889999999988874321      111111    1123333322221 12110    0000000   000


Q ss_pred             HHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhH
Q 012821          347 AACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFV  426 (456)
Q Consensus       347 ~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~l  426 (456)
                      .              ..+.+.....+...+.+++.....|+.+|...++...+. |+...+++..+  .||  +.++.++
T Consensus       210 ~--------------~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~-Pv~a~~~g~l~--l~E--~~~~~~~  270 (296)
T PRK15430        210 M--------------SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIG-PTLMFLLAVTF--YGE--KPGADKM  270 (296)
T ss_pred             H--------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH-HHHHHHHHHHH--HcC--CCCHHHH
Confidence            0              000011111123446677788888999999999987766 44444444332  244  4788899


Q ss_pred             HHHHHHHHhhhhccC
Q 012821          427 AGAVILVMGLLIYSW  441 (456)
Q Consensus       427 iG~vilv~G~liYn~  441 (456)
                      +|.++++.|..+...
T Consensus       271 ~G~~lI~~~~~v~~~  285 (296)
T PRK15430        271 VTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999888777654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.83  E-value=3e-07  Score=91.40  Aligned_cols=213  Identities=14%  Similarity=0.026  Sum_probs=126.4

Q ss_pred             hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCC
Q 012821          187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKG  266 (456)
Q Consensus       187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~  266 (456)
                      +.-+........+.+.|+.+++.+.-.++..+..+++++++++++|+|++++||+|+.+.++|+.++..++.+.  .   
T Consensus        67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~--~---  141 (281)
T TIGR03340        67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ--H---  141 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc--c---
Confidence            33455677777888899999999999999999999999999999999999999999999999998765432111  1   


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHH-HHHhhhhhcccCCCCCCchhhhhh
Q 012821          267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFI-CLLLPFLSKLWGIPFSQLPIYLRD  345 (456)
Q Consensus       267 ~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~-~lllP~~~~~~g~~~~~~~~~l~d  345 (456)
                       ...+..+.+++.+..|+.+++..+.-++        .+......+...++.+.. .++.+........+..  +.   +
T Consensus       142 -~~~g~~~~l~aal~~a~~~i~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~  207 (281)
T TIGR03340       142 -RRKAYAWALAAALGTAIYSLSDKAAALG--------VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF--PY---A  207 (281)
T ss_pred             -chhHHHHHHHHHHHHHHhhhhccccccc--------hhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh--hh---H
Confidence             1234567788888899988865553222        121111111112333221 1111110000000000  00   0


Q ss_pred             hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821          346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF  425 (456)
Q Consensus       346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~  425 (456)
                       .              ....+.....+...+-+.+-....++.++...+....+. |+...+++..+  .||  +.++.+
T Consensus       208 -~--------------~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~--lgE--~~~~~~  267 (281)
T TIGR03340       208 -R--------------QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWF--LNE--RWYLTR  267 (281)
T ss_pred             -H--------------HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHH--hCC--CccHHH
Confidence             0              000111222333445566666677777775555444333 54444444332  355  478899


Q ss_pred             HHHHHHHHHhhhh
Q 012821          426 VAGAVILVMGLLI  438 (456)
Q Consensus       426 liG~vilv~G~li  438 (456)
                      ++|.++++.|+.+
T Consensus       268 ~iG~~lil~Gv~l  280 (281)
T TIGR03340       268 LMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhHHh
Confidence            9999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.79  E-value=1.2e-05  Score=80.68  Aligned_cols=271  Identities=13%  Similarity=-0.023  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH-HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHH
Q 012821          117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL-ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL  195 (456)
Q Consensus       117 v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~-m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l  195 (456)
                      +..+.+.++..+ .|.++.|...+..  -|+..... +.++.+.+ +.  +.+.++...++    ..++..+..|++...
T Consensus        14 ~~~~~la~~~~~-~~~~~~K~~~~~~--~~~~~~~~R~~~a~l~l-~~--~~~~~~~~~~~----~~~~~~~~~g~~~~~   83 (293)
T PRK10532         14 ILLLLIAMASIQ-SGASLAKSLFPLV--GAPGVTALRLALGTLIL-IA--IFKPWRLRFAK----EQRLPLLFYGVSLGG   83 (293)
T ss_pred             HHHHHHHHHHHH-hhHHHHHHHHHHc--CHHHHHHHHHHHHHHHH-HH--HHhHHhccCCH----HHHHHHHHHHHHHHH
Confidence            455556666666 5556799887742  23333332 33332222 11  12211111111    112335577888788


Q ss_pred             HHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHH
Q 012821          196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLM  275 (456)
Q Consensus       196 ~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLi  275 (456)
                      .+.+.+.|..++|.+.-.++..+.-.++++++    +||..+  +.++.+.++|+.+....+.+.+    +....|+++.
T Consensus        84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~----~~~~~G~ll~  153 (293)
T PRK10532         84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVS----HVDLTGAALA  153 (293)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcc----cCChHHHHHH
Confidence            88888889999999987777777777777766    355544  4556677888877653332211    1235689999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCC
Q 012821          276 IVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGT  355 (456)
Q Consensus       276 ilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~  355 (456)
                      ++|.+..|+..++-.|.-+++        ++... .+..+++.   .+++|+.....+ +.   ... ....        
T Consensus       154 l~aa~~~a~~~v~~r~~~~~~--------~~~~~-~~~~~~~~---~~l~~~~~~~~~-~~---~~~-~~~~--------  208 (293)
T PRK10532        154 LGAGACWAIYILSGQRAGAEH--------GPATV-AIGSLIAA---LIFVPIGALQAG-EA---LWH-WSIL--------  208 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhccC--------CchHH-HHHHHHHH---HHHHHHHHHccC-cc---cCC-HHHH--------
Confidence            999999999999877764432        22221 22222222   233443221111 00   000 0000        


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHh
Q 012821          356 LSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMG  435 (456)
Q Consensus       356 ~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G  435 (456)
                              .....+.++..++.+.+....+|+.+|...++...+. |+...+++..+  +||  +.++.+++|.++++.|
T Consensus       209 --------~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~-Pv~a~l~~~l~--lgE--~~~~~~~iG~~lIl~~  275 (293)
T PRK10532        209 --------PLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSME-PALAAVSGMIF--LGE--TLTLIQWLALGAIIAA  275 (293)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhH-HHHHHHHHHHH--hCC--CCcHHHHHHHHHHHHH
Confidence                    0112344555566777778888999999999988766 55555555443  355  4788999999999999


Q ss_pred             hhhccCCCCC
Q 012821          436 LLIYSWTPTA  445 (456)
Q Consensus       436 ~liYn~~~~~  445 (456)
                      .+.+.+..++
T Consensus       276 ~~~~~~~~~~  285 (293)
T PRK10532        276 SMGSTLTIRR  285 (293)
T ss_pred             HHHHHhcCCC
Confidence            9999765443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.69  E-value=2.5e-06  Score=85.95  Aligned_cols=292  Identities=18%  Similarity=0.196  Sum_probs=186.3

Q ss_pred             CCCcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHH--HHhhHHHHHHHHHHHHHHhcCCcccccccCC-Cchh
Q 012821          110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMP-KAPF  186 (456)
Q Consensus       110 ~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~--~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p-~~~f  186 (456)
                      .++...+.+..++.+.+....=++.-|+.... ++||-.+..  ...+..+++    ++..++.|-++.|+.... .+++
T Consensus         6 ~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~----v~~lk~~~lv~~~~l~~~~~kk~   80 (314)
T KOG1444|consen    6 GSKKQSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLV----VLVLKRLGLVNFRPLDLRTAKKW   80 (314)
T ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHH----HHHHHHhceeecCCcChHHHHHH
Confidence            34444566788889999999999999988753 445444433  332222222    233344445554443322 2667


Q ss_pred             hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCC
Q 012821          187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKG  266 (456)
Q Consensus       187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~  266 (456)
                      +.+.++....-..+..++.|++.+.+.++|...++.|++.=..|+|+|.++.-|.+++..++|-.+...++.+-      
T Consensus        81 ~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf------  154 (314)
T KOG1444|consen   81 FPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF------  154 (314)
T ss_pred             ccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee------
Confidence            77888888877777788899999999999999999999999999999999999999999998866654332211      


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhh
Q 012821          267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDG  346 (456)
Q Consensus       267 ~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg  346 (456)
                       ...|-..+...++..+.-+++-++..+..+.   ++.+....|       -+++.+.+++....+|    |.. .+   
T Consensus       155 -~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l---~~~~lv~yN-------nl~~L~~l~~~~~~~g----e~~-~l---  215 (314)
T KOG1444|consen  155 -NLRGYSWALANCLTTAAFVVYVKKSVDSANL---NKFGLVFYN-------NLLSLPPLLILSFITG----ELD-AL---  215 (314)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHHHhhccccc---cceeEEeeh-------hHHHHHHHHHHHHHhc----chH-HH---
Confidence             1223344567888899999999988875311   123333333       3333444455444443    211 11   


Q ss_pred             HHhhhccCCCCCCCCCcch--HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchh
Q 012821          347 AACFLNLGTLSSGCDGAPL--LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTG  424 (456)
Q Consensus       347 ~~cf~g~~~~~~~c~ga~l--l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~  424 (456)
                         ..+.+    .|.....  ...+--++-++.|++...-+...||++.+++...-. +...+-.+.    +++...++.
T Consensus       216 ---~~~~~----~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~-l~t~l~~ll----~~d~~~~~~  283 (314)
T KOG1444|consen  216 ---SLNFD----NWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNK-LLTYLGGLL----FGDKPFTFL  283 (314)
T ss_pred             ---Hhhcc----cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhh-HHHHHHHHh----cCCceechh
Confidence               01111    1111111  222333455678888999999999999999984333 222222211    234457888


Q ss_pred             hHHHHHHHHHhhhhccCCC
Q 012821          425 FVAGAVILVMGLLIYSWTP  443 (456)
Q Consensus       425 ~liG~vilv~G~liYn~~~  443 (456)
                      -++|..+=++|-++|++.+
T Consensus       284 n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  284 NVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             hhHHHHHHhhhhhHHhhhh
Confidence            8999999999999999875

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.61  E-value=2.5e-06  Score=85.39  Aligned_cols=291  Identities=16%  Similarity=0.213  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHH-HHHHHHHHhcCCcccccccCCCchh----hHHHH
Q 012821          117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVY-FSILYLRYHAGIVTDEMLSMPKAPF----VAVGL  191 (456)
Q Consensus       117 v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~-f~il~~~~~~~~i~~e~~~~p~~~f----~i~al  191 (456)
                      ++.+++++-.+...=+-.+|+.... +.+|-|.+...   +.+-| |+.+..+-+....++....+.|..+    +.-|+
T Consensus        17 ~L~lVl~yY~~Si~Ltf~~~~~~~~-f~fPLf~ts~h---~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal   92 (349)
T KOG1443|consen   17 TLALVLLYYFLSIGLTFYFKWLTKN-FHFPLFVTSLH---LAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL   92 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcC-cCCchHHHHHH---HHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh
Confidence            3334455555555556666666554 89999998886   43333 4444333222222332234444322    34455


Q ss_pred             HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHH
Q 012821          192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFW  271 (456)
Q Consensus       192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig  271 (456)
                      +-++---+.+.++.|++.+.+.|.+.+.|+|..+||.+|-=.|+++.=.+-++++.+|+++......+       ..+.|
T Consensus        93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq-------f~i~G  165 (349)
T KOG1443|consen   93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ-------FNIEG  165 (349)
T ss_pred             hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc-------eeehh
Confidence            54444458899999999999999999999999999999988888888888888888888887764322       34778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhh
Q 012821          272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFL  351 (456)
Q Consensus       272 ~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~  351 (456)
                      -.++..|...+++--.+-++++++..- +|  -+|+...   .--|-.+...++|.....-|..     ........-++
T Consensus       166 f~lv~~aS~~sGlRW~~tQ~ll~~~~~-~~--~~P~~ti---~~l~p~M~~~Ll~~~l~fEG~~-----~~~~s~~f~~~  234 (349)
T KOG1443|consen  166 FFLVLAASLLSGLRWAFTQMLLRNQPS-AK--RNPIDTI---FHLQPWMSIGLLPLSLLFEGLH-----LITSSSIFRFQ  234 (349)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhcCcc-cc--CCCeeeH---HHhhhHHHHHHHHHHHHHcccc-----cchhhhHHHhc
Confidence            899999999999999999999998632 12  2334322   1122233334556533332211     11111110011


Q ss_pred             ccCCCCCCCCCcchHHHHHH----HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHH
Q 012821          352 NLGTLSSGCDGAPLLPLLFV----LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVA  427 (456)
Q Consensus       352 g~~~~~~~c~ga~ll~~lyi----i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~li  427 (456)
                      +.+        ..+.++.++    ...++.-++...++...|.++.+++.-+.- +...++.+..  .+++  ++.....
T Consensus       235 d~~--------~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Ke-l~tl~la~ii--~~d~--ls~lN~~  301 (349)
T KOG1443|consen  235 DTG--------LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKE-VCTLLLAIII--LKDQ--LSLLNWL  301 (349)
T ss_pred             Ccc--------HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHH-HHHHHHHHHH--hhcc--hhhhHHH
Confidence            100        011111111    122334455566677889999999877663 3333333332  2333  5667889


Q ss_pred             HHHHHHHhhhhccCC
Q 012821          428 GAVILVMGLLIYSWT  442 (456)
Q Consensus       428 G~vilv~G~liYn~~  442 (456)
                      |+.+-+.|+.+|+.+
T Consensus       302 Gl~i~~agi~~~~~~  316 (349)
T KOG1443|consen  302 GLAICLAGILLHRNE  316 (349)
T ss_pred             HHHHHHHHHHHhccC
Confidence            999999999999543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.58  E-value=7.4e-07  Score=79.87  Aligned_cols=152  Identities=20%  Similarity=0.262  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhh
Q 012821          271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACF  350 (456)
Q Consensus       271 g~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf  350 (456)
                      |.++.++|.+++|+..|+.|+.+++..+ -+.+.|.+.+..+.+...+++..+..++....      +..+...+..   
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~-~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~------~~~~~~~~~~---   70 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSS-NSKKLNPLNLLYYNSPISFIILLPLAFLLEGP------QLSSFFSEIF---   70 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHhhh------hhhhHHHHhh---
Confidence            3567889999999999999999988421 01236666666666666665444333332211      1111111000   


Q ss_pred             hccCCCCCCCC-CcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHH
Q 012821          351 LNLGTLSSGCD-GAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGA  429 (456)
Q Consensus       351 ~g~~~~~~~c~-ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~  429 (456)
                      . .+ .  +.+ ......+..-+...+.|++...++|+.|+++.+++..++.++.+.+..+.+   |++  .++.+++|.
T Consensus        71 ~-~~-~--~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f---~~~--~t~~~~~G~  141 (153)
T PF03151_consen   71 G-EE-L--SSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFF---GEP--ITPLQIIGI  141 (153)
T ss_pred             h-hh-h--cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhc---CCc--CCHHHHHHH
Confidence            0 00 0  000 111223334455668999999999999999999999999876665555444   543  788999999


Q ss_pred             HHHHHhhhhccC
Q 012821          430 VILVMGLLIYSW  441 (456)
Q Consensus       430 vilv~G~liYn~  441 (456)
                      ++.+.|.++|++
T Consensus       142 ~l~~~G~~~Ysy  153 (153)
T PF03151_consen  142 VLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHheeeC
Confidence            999999999985

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.54  E-value=5.1e-07  Score=87.40  Aligned_cols=232  Identities=14%  Similarity=0.148  Sum_probs=156.6

Q ss_pred             ccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCC
Q 012821          179 LSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS  258 (456)
Q Consensus       179 ~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~  258 (456)
                      .+.|-|.|+.-++-+.++-+-.+-|+.+.|-|.+.+=....-+=.|++.+.|+||+|++.+|.+++++++|+++-.....
T Consensus        81 D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen   81 DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence            45677778777777778777788889999999866655555555899999999999999999999999999999875421


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCC
Q 012821          259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQ  338 (456)
Q Consensus       259 ~~~~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~  338 (456)
                      .-++.......+|-+|+++|--..++-++.||++=+.|.+  .+.--+++.|-|..++--.    -+-+    .|    |
T Consensus       161 Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~--~g~~MM~~~NlwStL~Lg~----g~lf----TG----E  226 (337)
T KOG1580|consen  161 KVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR--TGTSMMFYTNLWSTLYLGA----GLLF----TG----E  226 (337)
T ss_pred             ccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc--CchhhHHHHHHHHHHHhhh----hhee----hh----h
Confidence            1110000112467799999999999999999998777744  1222245566555444211    0111    11    2


Q ss_pred             chhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCC
Q 012821          339 LPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVA  418 (456)
Q Consensus       339 ~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~  418 (456)
                      +.+.+     .|...-+.      .+.-..++-+...+.+++...-+.+.+-++.+++.+-|.-+++++..+.|     +
T Consensus       227 lweF~-----yF~~RhP~------~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf-----~  290 (337)
T KOG1580|consen  227 LWEFF-----YFVQRHPY------VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLF-----N  290 (337)
T ss_pred             HHHHH-----HHHHhccH------HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHh-----c
Confidence            22322     12111110      01122345567778888888888999999999999888766666655555     2


Q ss_pred             CCCchhhHHHHHHHHHhhhhcc
Q 012821          419 SSLPTGFVAGAVILVMGLLIYS  440 (456)
Q Consensus       419 ~~~~~~~liG~vilv~G~liYn  440 (456)
                      +.++..|.+|.++++.|+..=-
T Consensus       291 npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  291 NPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             CcCcHHHHHHHHHHHHHhhhHh
Confidence            3467789999999999986544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.37  E-value=0.00026  Score=71.24  Aligned_cols=212  Identities=17%  Similarity=0.028  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcc-hhHHHHHHHHHHHhcCcccchh----hhHHHHHhhheeeEEecCCCCCC
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGH  262 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq-~~Ip~T~llS~iFLkrRy~~~q----~lGv~lVi~Gviivv~sg~~~~~  262 (456)
                      +.|++-..++...+.+..++..+.-..+.+ ...++..+++.+++|+|.++.|    ++|++++++|++++...+.++.+
T Consensus        64 l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~  143 (290)
T TIGR00776        64 LSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG  143 (290)
T ss_pred             HHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc
Confidence            445568889999999999999998877777 6677899999999999999999    99999999998887654322211


Q ss_pred             CCC-CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchh
Q 012821          263 SLK-GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPI  341 (456)
Q Consensus       263 s~~-~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~  341 (456)
                      ..+ .+...|++.-++|.+.++...+.-++.  +|        |++....+...-.++.+.++.+.+ . ...|+  .++
T Consensus       144 ~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~--------~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~~--~~~  209 (290)
T TIGR00776       144 IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV--------DGLSVLLPQAIGMVIGGIIFNLGH-I-LAKPL--KKY  209 (290)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC--------CcceehhHHHHHHHHHHHHHHHHH-h-cccch--HHH
Confidence            000 122458888899999999999988853  23        334432111111111122222222 1 10111  011


Q ss_pred             hhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHh-hhcHHHHHHHHHhhhhhhhhhccccccccCCCCC
Q 012821          342 YLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLK-ISSAIVSSLASTFSVPISVYVFTLPLPYLGVASS  420 (456)
Q Consensus       342 ~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K-~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~  420 (456)
                      ..   +                 ...+..++ -.+-|++-..-.+ +..+....+.+.+- |++..+++..+  .+|  .
T Consensus       210 ~~---~-----------------~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~-pvia~~~~v~~--l~E--~  263 (290)
T TIGR00776       210 AI---L-----------------LNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLG-VIISTLGGILI--LGE--K  263 (290)
T ss_pred             HH---H-----------------HHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHH-HHHHHHHHHHH--hcc--C
Confidence            11   1                 01111222 2333333333445 66777777776666 55555555443  344  3


Q ss_pred             CchhhH----HHHHHHHHhhhhc
Q 012821          421 LPTGFV----AGAVILVMGLLIY  439 (456)
Q Consensus       421 ~~~~~l----iG~vilv~G~liY  439 (456)
                      ..+.++    +|.++++.|.++=
T Consensus       264 ~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       264 KTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             CCcceeehhHHHHHHHHHHHHHH
Confidence            566666    9999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.35  E-value=1.1e-06  Score=76.04  Aligned_cols=97  Identities=21%  Similarity=0.203  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH-HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccch
Q 012821          160 VYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVN  238 (456)
Q Consensus       160 v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~-l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~  238 (456)
                      +...+...+.+.++..++.++.|+......|.+.. .+..+.+.|..++|+ ...++.+...+++++++.+++|+|.++.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~   89 (113)
T PF13536_consen   11 FLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPR   89 (113)
T ss_pred             HHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence            33333444433333333444444444455588876 778888899999995 6679999999999999999999999999


Q ss_pred             hhhHHHHHhhheeeEEecC
Q 012821          239 QLFGCFLVGIGVIITVASG  257 (456)
Q Consensus       239 q~lGv~lVi~Gviivv~sg  257 (456)
                      +|+|++++++|++++..++
T Consensus        90 ~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   90 RWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHhhhh
Confidence            9999999999999987654

>TIGR00688 rarD rarD protein

Probab=98.29  E-value=0.00015  Score=70.80  Aligned_cols=96  Identities=17%  Similarity=0.124  Sum_probs=78.6

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCC
Q 012821          186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK  265 (456)
Q Consensus       186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~  265 (456)
                      ..+.|.+-.....+.+.|..+++.+.-.++..+.-+++++++.+|+|+|.+++||+|+++.++|++++..++   ++   
T Consensus        73 ~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~~---  146 (256)
T TIGR00688        73 LLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---GS---  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---CC---
Confidence            455677777778888899999999999999999999999999999999999999999999999988764321   11   


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHh
Q 012821          266 GAGIFWSLLMIVSFLLQAADTVLKEVI  292 (456)
Q Consensus       266 ~~~iig~lLiilS~i~~A~~~V~eEk~  292 (456)
                       ..    .+.+++.+..|+.+++.++.
T Consensus       147 -~~----~~~l~aa~~~a~~~i~~~~~  168 (256)
T TIGR00688       147 -LP----WEALVLAFSFTAYGLIRKAL  168 (256)
T ss_pred             -ch----HHHHHHHHHHHHHHHHHhhc
Confidence             11    34567889999988888774

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.12  E-value=1.4e-05  Score=68.07  Aligned_cols=119  Identities=23%  Similarity=0.198  Sum_probs=81.2

Q ss_pred             hHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHH-HHHHHHHHHHHhhhcc
Q 012821          130 GNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLL-EALAAATGMAAGAILS  208 (456)
Q Consensus       130 ~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~all-D~l~~~L~~ia~~~ts  208 (456)
                      ...+..|...++  ..|...+....+.-.+ .+.+.....+.+  .++.....+...++.+.+ -.++..+.+.|..+++
T Consensus         5 ~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    5 IYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            456677777776  3344444444222222 222222332221  111111122334566766 4888888899999999


Q ss_pred             hhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       209 ~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      ++...++.....+++++++++++|+|+++.|++|++++++|++++
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.02  E-value=1.5e-06  Score=85.74  Aligned_cols=204  Identities=15%  Similarity=0.219  Sum_probs=132.8

Q ss_pred             HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHHH
Q 012821          199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVS  278 (456)
Q Consensus       199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiilS  278 (456)
                      .++.-+.|.+.+-+++=|+...|||.++++.+||.|=+..-..||+++++|..+    |.+++.+.+...+.|.++=+.|
T Consensus       118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVla  193 (347)
T KOG1442|consen  118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLA  193 (347)
T ss_pred             ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHH
Confidence            344556789999999999999999999999999999999999999999999877    3344333344668888888999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCC
Q 012821          279 FLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSS  358 (456)
Q Consensus       279 ~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~  358 (456)
                      ++..|+-.+|-.|..-.-     ++ .+|.+..+..++..+   +++|..... |    ++.+        ..+....  
T Consensus       194 Sl~vAlnaiytkk~l~~v-----~~-~iw~lt~ynnv~a~l---Lflpll~ln-g----e~~~--------v~~~~~l--  249 (347)
T KOG1442|consen  194 SLAVALNAIYTKKVLPPV-----GD-CIWRLTAYNNVNALL---LFLPLLILN-G----EFQA--------VVGFPHL--  249 (347)
T ss_pred             HHHHHHHHHhhheecccc-----cC-eehhhHHHHHHHHHH---HHHHHHHHc-c----hHHH--------HcCcccc--
Confidence            999999888877655332     11 245555555555543   345543321 1    1111        1111111  


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHH----hhhcHHHHHHHHHhhh----hhhhhhccccccccCCCCCCchhhHHHHH
Q 012821          359 GCDGAPLLPLLFVLVNMGFNISLLHLL----KISSAIVSSLASTFSV----PISVYVFTLPLPYLGVASSLPTGFVAGAV  430 (456)
Q Consensus       359 ~c~ga~ll~~lyii~ni~~N~~~~~v~----K~~SA~~~~lv~svr~----pLsi~~f~l~~~~~G~~~~~~~~~liG~v  430 (456)
                         . ...+|+-+...-++|+..-+++    |-.|.++.++..+.+-    .+.+..       .+|  +.+.++.-|-+
T Consensus       250 ---~-a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~-------y~E--~ks~lwwtsn~  316 (347)
T KOG1442|consen  250 ---P-AIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAY-------YSE--TKSGLWWTSNI  316 (347)
T ss_pred             ---h-HHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHH-------HHH--HhhhheeeeeE
Confidence               0 1133444555556777777776    7788888888765552    222221       122  34555666777


Q ss_pred             HHHHhhhhccCCC
Q 012821          431 ILVMGLLIYSWTP  443 (456)
Q Consensus       431 ilv~G~liYn~~~  443 (456)
                      +++.|...|.+..
T Consensus       317 ~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  317 VVLVGSLAYTLVK  329 (347)
T ss_pred             EEEehhHHHHHHH
Confidence            8899999999753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.00  E-value=6.5e-05  Score=76.21  Aligned_cols=70  Identities=23%  Similarity=0.391  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC
Q 012821          191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP  260 (456)
Q Consensus       191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~  260 (456)
                      .++.++..++++|+.+.|.++.+-|....++++++++..+||+|+++.++.|+.++++|.++.+..++.+
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            3578889999999999999999999999999999999999999999999999999999998877655433

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.65  E-value=0.00075  Score=60.11  Aligned_cols=132  Identities=24%  Similarity=0.272  Sum_probs=84.6

Q ss_pred             HHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHH-HHHHHHHH
Q 012821          119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALAA  197 (456)
Q Consensus       119 il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~-allD~l~~  197 (456)
                      +++++--.+-....++.|+-.+.+  -|-|.+..=++.-... ...+...+.+-+...| .....|.|++. |+.-.++-
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl~~v--dp~~At~IRtiVi~~~-l~~v~~~~g~~~~~~~-~~~k~~lflilSGla~glsw   81 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGLEGV--DPDFATTIRTIVILIF-LLIVLLVTGNWQAGGE-IGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccc--CccHHHHHHHHHHHHH-HHHHHHhcCceecccc-cCcceehhhhHHHHHHHHHH
Confidence            344455556677899999988732  3444544432222211 1111222222111111 11222556554 54555555


Q ss_pred             HHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821          198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV  254 (456)
Q Consensus       198 ~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv  254 (456)
                      .+-|-|+..=.+|...-++....+++.++|++|||.|++..||+|+.++++|++++-
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            566678888888877888999999999999999999999999999999999988763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.42  E-value=0.0024  Score=57.02  Aligned_cols=67  Identities=27%  Similarity=0.392  Sum_probs=60.5

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ++..+++-...|...+....++++-.++++.....+.+.++|+++++.+.+..|++|+.+.++|+++
T Consensus        84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            4556777778888888888899999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.31  E-value=0.00052  Score=68.02  Aligned_cols=132  Identities=16%  Similarity=0.202  Sum_probs=87.3

Q ss_pred             CcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHH-HHHHHHHHHHHHhcCCcccccccCCCchhh-HH
Q 012821          112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY-VAVYFSILYLRYHAGIVTDEMLSMPKAPFV-AV  189 (456)
Q Consensus       112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y-~~v~f~il~~~~~~~~i~~e~~~~p~~~f~-i~  189 (456)
                      +.+...+.+.+. ..+.++-.+..|...+.    |--+++.-.++= .+.|-|.+++++-   +   --+.++++++ +=
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~----p~e~a~~r~l~~mlit~pcliy~~~~---v---~gp~g~R~~LiLR  103 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND----PMELASFRLLVRMLITYPCLIYYMQP---V---IGPEGKRKWLILR  103 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccC----hhHhhhhhhhhehhhhheEEEEEeee---e---ecCCCcEEEEEee
Confidence            666777777666 66677777777766542    222222221111 1111111111211   1   1122334443 44


Q ss_pred             HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821          190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV  254 (456)
Q Consensus       190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv  254 (456)
                      |+.-..+-.++|.|+.|++.+=-.+..-+.-++|.++++++||.+|++.+-+|..+.+.|+++.+
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv  168 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV  168 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence            77777888899999999998877777778889999999999999999999999999999999875

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.09  E-value=0.0093  Score=57.81  Aligned_cols=65  Identities=25%  Similarity=0.318  Sum_probs=56.9

Q ss_pred             hHHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhhee
Q 012821          187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI  251 (456)
Q Consensus       187 ~i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvi  251 (456)
                      +..+.+ -.++..+.+.+..+++++....+.....+++++++++++|.+++..|++|+.+++.|+.
T Consensus       195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            445555 45677777789999999999999999999999999999999999999999999999863

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.90  E-value=0.0071  Score=52.54  Aligned_cols=63  Identities=13%  Similarity=0.066  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      .+..++..+...++..+|.+.-..+-+...+++++++++++|.|.+..|++|+.++++|++++
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            456666777778888899987666667999999999999999999999999999999998764

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=96.84  E-value=0.0075  Score=57.63  Aligned_cols=218  Identities=18%  Similarity=0.220  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHH
Q 012821          193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS  272 (456)
Q Consensus       193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~  272 (456)
                      -..+|.+-..|+..++++.-.-+....--|.-+++++.||.|+...+++++.+.+.|+++.-..+..  +.   .+++|+
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~--~a---~e~iGi  137 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE--HA---DEIIGI  137 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch--hh---hhhhhH
Confidence            3456777777888888888888888888999999999999999999999999999998887654322  22   358898


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhc
Q 012821          273 LLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLN  352 (456)
Q Consensus       273 lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g  352 (456)
                      ..-+.|...+|+--|...++.....-   ++...|  .+--|+|.+.+.. +-|......|++.  +...-...+.|+. 
T Consensus       138 ~~AV~SA~~aAlYKV~FK~~iGnAn~---Gdaa~F--mS~LGF~NL~~~~-~~~lIL~~T~VE~--~qsFA~~PWG~l~-  208 (290)
T KOG4314|consen  138 ACAVGSAFMAALYKVLFKMFIGNANF---GDAAHF--MSCLGFFNLCFIS-FPALILAFTGVEH--LQSFAAAPWGCLC-  208 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCcc---hhHHHH--HHHHHHHHHHHHh-hhHHHHHHhchHH--HHHHhhCCchhhh-
Confidence            88888888888877777666644210   122222  2344555443322 1122222333221  1001111122222 


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHH
Q 012821          353 LGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVIL  432 (456)
Q Consensus       353 ~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vil  432 (456)
                               |+   ..+.+.+|+..|+-...    ..-++-++-+.+.+|.-.. ..+.+    ++..+..++++|.+++
T Consensus       209 ---------G~---A~L~lAFN~~iN~GiaL----~~PilISiG~l~~iP~Naa-iDiL~----q~l~~ntl~La~T~iI  267 (290)
T KOG4314|consen  209 ---------GA---AGLSLAFNFLINFGIAL----LNPILISIGMLCGIPGNAA-IDILF----QELEFNTLFLAATCII  267 (290)
T ss_pred             ---------hH---HHHHHHHhhheeehhhh----hchhhheehheecCcchhH-HHHHH----HHHHHHHHHHHHHHHH
Confidence                     21   12344445544443322    2233333333333443221 12222    2223566889999999


Q ss_pred             HHhhhhccCCCCC
Q 012821          433 VMGLLIYSWTPTA  445 (456)
Q Consensus       433 v~G~liYn~~~~~  445 (456)
                      .+|.++--.+.++
T Consensus       268 ~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  268 CIGFILIIIPEDK  280 (290)
T ss_pred             HHhHHheecccch
Confidence            9998887665444

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.35  E-value=0.025  Score=57.65  Aligned_cols=74  Identities=19%  Similarity=0.304  Sum_probs=62.4

Q ss_pred             hHHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC
Q 012821          187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP  260 (456)
Q Consensus       187 ~i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~  260 (456)
                      +..|++ -.++...++.|+.+-|+++..-|....++.+++++..|||+|++..-.+||+++++|-.+.+...+.+
T Consensus        67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            344554 45677777888899999999999999999999999999999999999999999999977766544433

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.32  E-value=0.031  Score=56.37  Aligned_cols=135  Identities=19%  Similarity=0.189  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccccc---ccCCC--chhhHHH
Q 012821          116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM---LSMPK--APFVAVG  190 (456)
Q Consensus       116 ~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~---~~~p~--~~f~i~a  190 (456)
                      -+.++.+.+ ++.....+..|...++...+|+-+-..+++--++..+.....-. .++..+..   .+.|.  ...++.+
T Consensus       155 G~~ll~~sl-~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s  232 (303)
T PF08449_consen  155 GIILLLLSL-LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS  232 (303)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence            444554444 44555556666666666667743333332222222222211101 11111100   11121  2223445


Q ss_pred             HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ++-.++....+.-....++....+....--+.|+++|+++.+++++..||+|++++..|+.+
T Consensus       233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~  294 (303)
T PF08449_consen  233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence            55555555555444567777778888888899999999999999999999999999999765

; GO: 0055085 transmembrane transport

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.25  E-value=0.015  Score=57.79  Aligned_cols=65  Identities=28%  Similarity=0.400  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ..+++..++..+.+.+..+.+++....+.....+++.+++++++|.+.+..|++|+.++++|+.+
T Consensus       216 ~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       216 LGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            44556777777888899999999989999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=96.21  E-value=0.037  Score=57.63  Aligned_cols=62  Identities=13%  Similarity=0.160  Sum_probs=53.5

Q ss_pred             HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEec
Q 012821          195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS  256 (456)
Q Consensus       195 l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~s  256 (456)
                      ++-.+.+.+..+.+++.-.++.-..-++++++++++|+.+++..|++|++++++|+.++...
T Consensus       268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            34444556777899999999999999999999999999999999999999999999887643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.69  E-value=0.028  Score=49.19  Aligned_cols=70  Identities=14%  Similarity=0.095  Sum_probs=62.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhcchhHH-HHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~-~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      |+|++|=++...++.+-+..+...+.|+- ++.+....++|++.++++.++..++..|+|+.+++.|+.++
T Consensus        42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            67889999999999999999999998854 55579999999999998888888889999999999999875

Many members are annotated as potential transmembrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.59  E-value=0.036  Score=49.04  Aligned_cols=72  Identities=10%  Similarity=0.149  Sum_probs=60.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          184 APFVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      +++++...+..++-.+...++..+|.+ -+.+..+..++.+.+.+++|+|.+++..|++|+.++++|++..-.
T Consensus        31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            445666677777777777888888888 577778999999999999999999999999999999999987643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.43  E-value=0.1  Score=52.50  Aligned_cols=71  Identities=20%  Similarity=0.146  Sum_probs=63.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHhh-hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhh----hHHHHHhhheeeEE
Q 012821          184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITV  254 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~-~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~----lGv~lVi~Gviivv  254 (456)
                      +..++.|.+..++..+.+.+.. +.+.+...++.+.-.+.+.+++++++|++.++.|+    +|+++++.|+++..
T Consensus       212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            4456688888888888888888 99999999999999999999999999999999999    99999999987754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00803 nst UDP-galactose transporter

Probab=95.33  E-value=0.17  Score=48.40  Aligned_cols=67  Identities=13%  Similarity=0.155  Sum_probs=57.3

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      .+.+.++-+++..+......+.+.....+....-++++.++|+++.+++++..||+|+.+|+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3455666777777777777888888888999999999999999999999999999999999999764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=95.11  E-value=0.25  Score=51.06  Aligned_cols=65  Identities=14%  Similarity=0.122  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ..+++..+.|...+.+...+++..+.+.....-+++.++|+++++.+.+..|++|++++++|+.+
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            34556666666666788899999999999999999999999999999999999999999999865

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.08  E-value=0.24  Score=49.56  Aligned_cols=68  Identities=21%  Similarity=0.144  Sum_probs=58.0

Q ss_pred             HHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          188 AVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       188 i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      ..|.+ -.++-.+.+.+..+++++...++.....+++.++++++++.+++..|++|+.++++|++....
T Consensus       213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            34444 445555667889999999999999999999999999999999999999999999999877643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=94.81  E-value=0.3  Score=48.98  Aligned_cols=68  Identities=12%  Similarity=-0.019  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      ..++.-.++-.+.+.++.+++++...++.-...++++++++++++.+++..|++|++++++|+.+...
T Consensus       220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            34444555566667888999999999999999999999999999999999999999999999877543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.58  E-value=0.14  Score=51.35  Aligned_cols=62  Identities=19%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821          193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV  254 (456)
Q Consensus       193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv  254 (456)
                      ....+.+.+.+..++++....++....-++++++++++++.+.+..|++|..++++|+.+..
T Consensus       231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            33344455567889999999999888888888999999999999999999999999987753

specificities overlap.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=94.54  E-value=0.57  Score=41.89  Aligned_cols=66  Identities=14%  Similarity=0.075  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHH--HhcCcccchhhhHHHHHhhheeeEEe
Q 012821          190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~i--FLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      -.+..++..+-..++...|.+.-.-+.....+++++.++.  ++|.+.+..||+|+.++++|++++..
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            3456666667777777788775555545555667777774  89999999999999999999988653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=94.46  E-value=0.5  Score=45.70  Aligned_cols=69  Identities=28%  Similarity=0.402  Sum_probs=59.0

Q ss_pred             hhHHHHHHH-HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821          186 FVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV  254 (456)
Q Consensus       186 f~i~allD~-l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv  254 (456)
                      ....+++-. ++..+.+.+....++....++.-..+++++++++++++.+++..|++|+.+++.|+.+..
T Consensus       217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            445566655 577777889999999999999988899999999999999999999999999999987653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.44  E-value=0.13  Score=44.77  Aligned_cols=65  Identities=22%  Similarity=0.201  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821          190 GLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV  254 (456)
Q Consensus       190 allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv  254 (456)
                      -.+..++-.+...++..+|.+ -+.+..+..++.+.+++++++|.+.+..|++|+.++++|++..-
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            333444444444556666666 56777888999999999999999999999999999999988763

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=94.32  E-value=0.62  Score=46.58  Aligned_cols=61  Identities=13%  Similarity=0.014  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      -.++..+-+.+..+.+++...++.-...+++++++++++|.+++..|++|+++++.|+.+.
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence            3455556667888999999999999999999999999999999999999999999998764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=94.07  E-value=0.17  Score=44.07  Aligned_cols=67  Identities=12%  Similarity=0.035  Sum_probs=56.6

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          186 FVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       186 f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ..+...+..++-.+.-.+...+|.+ -+.+..+..+..+.+.++++.|.+.+..|++|+.++++|++.
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            3455556666666667777788877 688999999999999999999999999999999999999875

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=93.94  E-value=7.8  Score=39.02  Aligned_cols=146  Identities=16%  Similarity=0.105  Sum_probs=93.6

Q ss_pred             cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHh-cchh
Q 012821          141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPIL-SQTF  219 (456)
Q Consensus       141 ~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mL-rq~~  219 (456)
                      +.+-+|.=|...|++|-.++-.....++ +. ..+.  .....+.-++-|++-.+++..++.+..+...|.-+=+ .+.=
T Consensus         7 k~gG~~~~Q~lG~t~Gali~alv~~~~~-~p-~~~~--~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q   82 (269)
T PF06800_consen    7 KIGGKPANQILGTTIGALIFALVVFLFR-QP-AFSM--SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ   82 (269)
T ss_pred             eeCCcHHHHHHHHHHHHHHHHHHHHHHh-CC-Ccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence            4566777788888888765544333332 11 1000  0012222357799999999999999988777744333 3556


Q ss_pred             HHHHHHHHHHHhcCcccchhhh----HHHHHhhheeeEEecCCCCCCC-CCCcchHHHHHHHHHHHHHHHHHHHHH
Q 012821          220 LVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSNPGHS-LKGAGIFWSLLMIVSFLLQAADTVLKE  290 (456)
Q Consensus       220 Ip~T~llS~iFLkrRy~~~q~l----Gv~lVi~Gviivv~sg~~~~~s-~~~~~iig~lLiilS~i~~A~~~V~eE  290 (456)
                      ++.+.++.+++++.--+..|++    +++++++|+++....+.+++++ ...+.--+.+..++|.+-+..-.+.-.
T Consensus        83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~  158 (269)
T PF06800_consen   83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPK  158 (269)
T ss_pred             HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999977766665    7788888988876654433321 122334566777788887776555533

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=93.71  E-value=1.1  Score=45.05  Aligned_cols=58  Identities=19%  Similarity=0.116  Sum_probs=48.2

Q ss_pred             HHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       198 ~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      .+.+.+..++++....++.....++++++++++|+.+++..|++|..++++|+.+...
T Consensus       230 ~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        230 GIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            3334556678887777777788888999999999999999999999999999887543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.64  E-value=0.29  Score=47.83  Aligned_cols=128  Identities=14%  Similarity=0.155  Sum_probs=82.4

Q ss_pred             HHHHHHHhhhhHHHHHHHHhC-cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHH
Q 012821          120 AAAVTVLLGVGNRVLYKLALV-PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAA  198 (456)
Q Consensus       120 l~~~~v~~G~~N~V~~K~~~~-~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~  198 (456)
                      ..+.+......-|+.-|.... +.||--|.+....+..++.- .+++-+   .+-++-+.++.  ++++++.++=..--.
T Consensus        10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~-l~iLk~---l~~~~fR~t~a--K~WfpiSfLLv~MIy   83 (309)
T COG5070          10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVG-LLILKF---LRLVEFRLTKA--KKWFPISFLLVVMIY   83 (309)
T ss_pred             HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHH-HHHHHH---HhHhheehhhh--hhhcCHHHHHHHHHH
Confidence            345555666667788886654 66777777666655555432 222211   11111111222  234455555443333


Q ss_pred             HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      ..-.++.|++.|++.++....|+..+..=+.|.|+|.+-.+.++-+++++.-++.
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va  138 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVA  138 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHh
Confidence            3346678999999999999999999999999999999999999988877664443

>PRK11431 multidrug efflux system protein; Provisional

Probab=93.58  E-value=0.23  Score=42.95  Aligned_cols=67  Identities=16%  Similarity=0.071  Sum_probs=56.2

Q ss_pred             hHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821          187 VAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT  253 (456)
Q Consensus       187 ~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv  253 (456)
                      ++...+..++-.+...+...+|.+ -+.+..+..++.+.+.++++.|.+.+..|++|+.++++|++..
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            444555666666666777777777 6889999999999999999999999999999999999998764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=93.49  E-value=1.3  Score=44.38  Aligned_cols=68  Identities=16%  Similarity=0.217  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      ..+..-.++..+.+.++.+.+++.-.++.-...+++.++++++++.+++..|++|+.++++|+.+...
T Consensus       218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34556667777778888999999999999999999999999999999999999999999988777654

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=92.98  E-value=0.37  Score=41.77  Aligned_cols=69  Identities=19%  Similarity=0.127  Sum_probs=56.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          184 APFVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       184 ~~f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      ++..+...+...+=.+.-.+...+|.+ -+.+..+..++-|.+.+++++|.+.+..+++|+.++++|++.
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~  100 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIG  100 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHH
Confidence            344555555555555566677777776 688999999999999999999999999999999999999875

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=92.47  E-value=0.86  Score=45.79  Aligned_cols=70  Identities=21%  Similarity=0.198  Sum_probs=58.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhh----hHHHHHhhheee
Q 012821          183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVII  252 (456)
Q Consensus       183 ~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~----lGv~lVi~Gvii  252 (456)
                      .|+=.+.|++..++|..++++....-...--.|.|..++++.+.+.++||.+=+++|+    +|++++++|.++
T Consensus       195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            3556899999999999999999998888888899999999999999999987666655    466667666543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=91.43  E-value=5.4  Score=40.48  Aligned_cols=77  Identities=21%  Similarity=0.092  Sum_probs=50.3

Q ss_pred             ccCCCch-hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhH-HHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          179 LSMPKAP-FVAVGLLEALAAATGMAAGAILSGASIPILSQTFL-VWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       179 ~~~p~~~-f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~I-p~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      ++.|+.. .+..+.+++..|...|+-..+-.-.+-.=|.=..- .+..++..+|||.|+++.||+++.+..+||.+-..
T Consensus        66 ~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          66 LKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            4455433 34567777887877775443321111111222223 35667899999999999999999999999987543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=90.97  E-value=0.78  Score=38.43  Aligned_cols=58  Identities=16%  Similarity=0.094  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHH
Q 012821          189 VGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV  246 (456)
Q Consensus       189 ~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lV  246 (456)
                      .-.+..++-.+...++.++|.+ .+.+..+..++.+.+.++++.|.+.+..|++|+.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3335666666666778888887 578999999999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=90.45  E-value=5  Score=39.60  Aligned_cols=129  Identities=14%  Similarity=0.064  Sum_probs=82.3

Q ss_pred             hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccccc--ccCCCchhhHHHHH
Q 012821          115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFVAVGLL  192 (456)
Q Consensus       115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~--~~~p~~~f~i~all  192 (456)
                      +-+...++..++.|......-|.+-++. .-.|.|+..+.+.=+++.+.....+. .+.+.++.  ....++ .+++-++
T Consensus       114 ~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~~~g~f~G~~~~-~~~~i~~  190 (244)
T PF04142_consen  114 LGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSD-GSAISESGFFHGYSWW-VWIVIFL  190 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhccc-ccccccCCchhhcchH-HHHHHHH
Confidence            3344444555666777777777766654 55777777762222222222222221 11222221  112222 3456678


Q ss_pred             HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHH
Q 012821          193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV  246 (456)
Q Consensus       193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lV  246 (456)
                      -++++.+.-+-.-|.+.-.--.-....++.|.++|+.+.+.+++....+|+.+|
T Consensus       191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            888888887778888877777777888999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=89.91  E-value=1.1  Score=37.66  Aligned_cols=64  Identities=20%  Similarity=0.277  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821          372 LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS  440 (456)
Q Consensus       372 i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn  440 (456)
                      +...+.+.+...-.|+.++...+...... |+...+++..+  .+|  +.++.+++|.++++.|+++-+
T Consensus        62 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-pv~~~i~~~~~--~~e--~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   62 LGTALAYLLYFYALKYISASIVSILQYLS-PVFAAILGWLF--LGE--RPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             cceehHHHHHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHH--cCC--CCCHHHHHHHHHHHHHHHHHH
Confidence            33456667777778999888888888766 55555555443  244  477889999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=88.87  E-value=6.8  Score=35.28  Aligned_cols=117  Identities=21%  Similarity=0.210  Sum_probs=65.9

Q ss_pred             HHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHh
Q 012821          125 VLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAG  204 (456)
Q Consensus       125 v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~  204 (456)
                      .+-+..|.-+.|...     .|+.-+...+..=.++...+.....+.  -.++..+.|||.|+ -|++-...-..+....
T Consensus        14 ~~q~~~N~~L~~~~g-----s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~v   85 (138)
T PF04657_consen   14 ALQAAFNGQLGKALG-----SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLGVFFVLSNIILV   85 (138)
T ss_pred             HHHHHHHHHHHHHhC-----ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHHHHHHHHHHHHh
Confidence            334555665555433     366666554322222223332332222  12334567877665 7777777666777666


Q ss_pred             hhcchhHHHHhcchhHHHHHHHHHHH--------hcCcccchhhhHHHHHhhheee
Q 012821          205 AILSGASIPILSQTFLVWQILLSIIF--------LGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       205 ~~ts~s~~~mLrq~~Ip~T~llS~iF--------LkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      +.+.+.....+.   +.=+++.|.++        -|++.+..+++|+.++++|+.+
T Consensus        86 p~lG~~~~~~l~---~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   86 PRLGAALTTILI---VAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hhhhHHHHHHHH---HHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            666665544332   22233333333        4789999999999999999763

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=86.96  E-value=9.9  Score=39.44  Aligned_cols=58  Identities=14%  Similarity=0.177  Sum_probs=45.8

Q ss_pred             HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEec
Q 012821          199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS  256 (456)
Q Consensus       199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~s  256 (456)
                      +.-+.+.++++....+=--+..|+++++.+++-|.++++..++|.+++++|+++--..
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            3334455666665555445679999999999999999999999999999999987543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=85.54  E-value=1  Score=46.30  Aligned_cols=66  Identities=14%  Similarity=0.171  Sum_probs=57.3

Q ss_pred             hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821          187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII  252 (456)
Q Consensus       187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii  252 (456)
                      .+.+.|-...|...+.....+++-.++++....-.+..+.|+++++++.+..|.+|+++.++|+.+
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~  304 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL  304 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence            444566666677777777899999999999999988999999999999999999999999999765

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=85.31  E-value=9.5  Score=40.14  Aligned_cols=106  Identities=15%  Similarity=0.232  Sum_probs=71.2

Q ss_pred             HHHHHhhHHHHHHHHHHH-----HHHhcCCcccccccCCC-chhhHHHHHHHHHH----HHHHHHhhhcchhHHHHhcch
Q 012821          149 LAQLATFGYVAVYFSILY-----LRYHAGIVTDEMLSMPK-APFVAVGLLEALAA----ATGMAAGAILSGASIPILSQT  218 (456)
Q Consensus       149 ~~~~m~~~y~~v~f~il~-----~~~~~~~i~~e~~~~p~-~~f~i~allD~l~~----~L~~ia~~~ts~s~~~mLrq~  218 (456)
                      +..-++|||+++|-.+++     .-.+.+   +|..+.|. .++..+-+-..+++    .+=..|...|++-+-.+=-..
T Consensus       277 vdi~lffGfvGLfnllllwP~l~iL~~~~---~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSl  353 (416)
T KOG2765|consen  277 VDIQLFFGFVGLFNLLLLWPPLIILDFFG---EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSL  353 (416)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHhc---cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeE
Confidence            455577888777644322     223332   24445554 23322222223444    444567777887776666677


Q ss_pred             hHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC
Q 012821          219 FLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG  257 (456)
Q Consensus       219 ~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg  257 (456)
                      .||..|+.=.++-+|.|+..+++|...+.+|.+++-.++
T Consensus       354 tIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  354 TIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             eeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            899999999999999999999999999999988886544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=80.67  E-value=7.2  Score=38.75  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=56.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC
Q 012821          183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG  257 (456)
Q Consensus       183 ~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg  257 (456)
                      +|...+.|.+..++....+.-..+-.+-.-.+....-=.||.+.|+++.+..++..||+|..+|..|+..-+..|
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            355678899999998888755544443333344444457899999999999999999999999999988755443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	456
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.03
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.7

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.03  E-value=0.0012  Score=55.99  Aligned_cols=71  Identities=24%  Similarity=0.210  Sum_probs=59.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhcchhHH-HHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          185 PFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       185 ~f~i~allD~l~~~L~~ia~~~ts~s~~-~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      +.+....+..++-.+...++.+.|.+.- .+.++...+++++++++++|.+.+..|++|+.++++|+++...
T Consensus        32 ~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3445556677777777788899999965 5559999999999999999999999999999999999887644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.70  E-value=0.0015  Score=57.68  Aligned_cols=71  Identities=24%  Similarity=0.224  Sum_probs=49.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821          185 PFVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA  255 (456)
Q Consensus       185 ~f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~  255 (456)
                      ++++..++..++..+...++...|.+ .+.+.++...+++++++++|+|.+++..|++|++++++|++++..
T Consensus        32 ~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             --CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34566677888888888999999999 455559999999999999999999999999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00