Citrus Sinensis ID: 013040


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
MKSPKNSGDETRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHDQCRDSTSSSSDSDSSSDINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHccEEEEc
cccccccccccEEEccccHcHccccccccccHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHcHEEEHHHHHHHHHHHHHHHHHHHHHcHHHEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHccEEEEc
mkspknsgdetrVDIQFNLQqenvplllqpsyarSKSLLFDELRNFRISLKWCaldhsscigkFISYFAFIFLAIIVPLISSlcikvpsstqdcaqdgpvsfnklvqfpesglaLVGFFILSRFFSKYGLRHLLFldglqedslfVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTvrvsfpggggdpwiNSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNmfegrrsgsdagfiFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGthadksffssgeLVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATcasvggsdsgkgnageaadhdqcrdstssssdsdsssdinikvlssqeppsFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
mkspknsgdetrVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHDQCRDStssssdsdsssDINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
MKSPKNSGDETRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHDQCRdstssssdsdsssdINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
**************IQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCAS************************************************FQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVL*
****************************************DELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQ*CAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCA****************************************VLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
**********TRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCAS***********************************INIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
**********TRVDIQFNLQ*ENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCAS*************************************IKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
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MKSPKNSGDETRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHDQCRDSTSSSSDSDSSSDINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVVLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
224115706440 predicted protein [Populus trichocarpa] 0.913 0.936 0.700 1e-168
255574165436 conserved hypothetical protein [Ricinus 0.946 0.979 0.683 1e-165
224121452409 predicted protein [Populus trichocarpa] 0.895 0.987 0.708 1e-162
356554454455 PREDICTED: uncharacterized protein LOC10 0.957 0.949 0.637 1e-155
356565842454 PREDICTED: uncharacterized protein LOC10 0.929 0.922 0.642 1e-151
225429856460 PREDICTED: uncharacterized protein LOC10 0.931 0.913 0.672 1e-150
357436689482 hypothetical protein MTR_1g009230 [Medic 0.955 0.894 0.559 1e-148
356518296437 PREDICTED: uncharacterized protein LOC10 0.922 0.951 0.610 1e-146
296081799435 unnamed protein product [Vitis vinifera] 0.895 0.928 0.651 1e-143
297821303414 hypothetical protein ARALYDRAFT_480957 [ 0.893 0.973 0.598 1e-130
>gi|224115706|ref|XP_002332122.1| predicted protein [Populus trichocarpa] gi|222874942|gb|EEF12073.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/444 (70%), Positives = 356/444 (80%), Gaps = 32/444 (7%)

Query: 11  TRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAF 70
           T+ + Q +  Q NVPLLLQPSYARSKSLLFDELRNFR+SL+WCALDHSSCIGK +SYF F
Sbjct: 26  TKENDQSDQLQANVPLLLQPSYARSKSLLFDELRNFRMSLRWCALDHSSCIGKTVSYFVF 85

Query: 71  IFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGL 130
           IFLAIIVP++SSL I+VPSS      D P+S+NKLVQ PES LA + FF L RFF +YGL
Sbjct: 86  IFLAIIVPIVSSLSIRVPSSA---PADDPISYNKLVQVPESALAFIAFFTLFRFFKRYGL 142

Query: 131 RHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFP-- 188
           R LLFLDGLQ+DSLFVR+GY+RELDKAFRYLACILLPSFFVELAHKII+FSTV++  P  
Sbjct: 143 RQLLFLDGLQDDSLFVRQGYSRELDKAFRYLACILLPSFFVELAHKIIFFSTVKIWLPYN 202

Query: 189 -GGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSG 247
               G P +NSI MFVLVLASWVYRTG++LLVCV+FRLTCEL ILRFEGLH +FEG   G
Sbjct: 203 ISPHGIP-LNSI-MFVLVLASWVYRTGVFLLVCVLFRLTCELQILRFEGLHKLFEG--CG 258

Query: 248 SDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGE 307
           S AG IFREH+RI+KQLS TSHRYRFFII+ LV I++SQ GALLL+LG +  KSFF+SG+
Sbjct: 259 SGAGVIFREHVRIKKQLSLTSHRYRFFIISCLVTITVSQFGALLLVLGFNTQKSFFNSGD 318

Query: 308 LVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAAD 367
           LV+CSAV+LSGFFLC+LGAARITHRAQGI S+ATRWHM  T A     D GK ++     
Sbjct: 319 LVICSAVQLSGFFLCLLGAARITHRAQGIVSIATRWHMNVTSA-FARVDQGKNHS----- 372

Query: 368 HDQCRDSTSSSSDSDSSSDINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLFGFALDRG 427
                           SSD  I + SSQ+P +FQ RQALVAYLQHNNGGITLFGFALDRG
Sbjct: 373 ---------------DSSDFFIAI-SSQDPCTFQTRQALVAYLQHNNGGITLFGFALDRG 416

Query: 428 LLHTIFAFEFSLVLWILSKVVVLS 451
           LLHT+FAFEFSL +WI+SKVVVLS
Sbjct: 417 LLHTLFAFEFSLGMWIMSKVVVLS 440




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574165|ref|XP_002527998.1| conserved hypothetical protein [Ricinus communis] gi|223532624|gb|EEF34410.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224121452|ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|222872633|gb|EEF09764.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356554454|ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783743 [Glycine max] Back     alignment and taxonomy information
>gi|356565842|ref|XP_003551145.1| PREDICTED: uncharacterized protein LOC100775945 [Glycine max] Back     alignment and taxonomy information
>gi|225429856|ref|XP_002280927.1| PREDICTED: uncharacterized protein LOC100262807 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357436689|ref|XP_003588620.1| hypothetical protein MTR_1g009230 [Medicago truncatula] gi|355477668|gb|AES58871.1| hypothetical protein MTR_1g009230 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356518296|ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804399 [Glycine max] Back     alignment and taxonomy information
>gi|296081799|emb|CBI20804.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297821303|ref|XP_002878534.1| hypothetical protein ARALYDRAFT_480957 [Arabidopsis lyrata subsp. lyrata] gi|297324373|gb|EFH54793.1| hypothetical protein ARALYDRAFT_480957 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
TAIR|locus:2047032414 AT2G21080 "AT2G21080" [Arabido 0.700 0.763 0.621 1.4e-120
TAIR|locus:2092424452 AT3G20300 [Arabidopsis thalian 0.913 0.911 0.363 2.2e-66
TAIR|locus:2008046453 AT1G50630 [Arabidopsis thalian 0.889 0.885 0.358 2.3e-64
TAIR|locus:2141481453 AT4G03820 "AT4G03820" [Arabido 0.847 0.843 0.318 1.1e-52
TAIR|locus:2132045437 MRB1 "AT4G22270" [Arabidopsis 0.858 0.885 0.325 6.5e-51
TAIR|locus:2008828456 AT1G67570 "AT1G67570" [Arabido 0.822 0.813 0.294 4e-42
TAIR|locus:2047032 AT2G21080 "AT2G21080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 976 (348.6 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
 Identities = 205/330 (62%), Positives = 239/330 (72%)

Query:    23 NVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISS 82
             N PL  QPS    KSL  D+LRNFR+ LKWCALDHSS  GK +SY  F+   ++VPLIS 
Sbjct:    18 NTPL--QPS----KSLPSDDLRNFRLLLKWCALDHSSSCGKAVSYMMFVVFTLLVPLISC 71

Query:    83 LCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQED 142
             L IK P +      D   SFN LVQFPESGLA++GF  L  FF  Y L  LLFLD    D
Sbjct:    72 LFIKTPRNRPSAVMDAN-SFNVLVQFPESGLAVIGFLTLICFFRIYSLTKLLFLD----D 126

Query:   143 SLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMF 202
             S  VR GY+RELDKA RYLA IL+PSF VEL HK I+F +  VSFP         + VMF
Sbjct:   127 STLVRLGYSRELDKALRYLAYILVPSFLVELVHKSIFFYSAEVSFPFIKSSCAALNFVMF 186

Query:   203 VLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDA-GFIFREHLRIR 261
              LVL SWVYRTG++LLVC++FRLTCEL ILRF GLH +F+  R GSD    + +EH+RI+
Sbjct:   187 FLVLFSWVYRTGVFLLVCILFRLTCELQILRFRGLHKLFD--RCGSDTIEDVCKEHVRIK 244

Query:   262 KQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFL 321
             KQLSATSHRYRFFII + VVIS SQ  ALLL+L + ++KSF SSG+LVVCSAV+LSGFFL
Sbjct:   245 KQLSATSHRYRFFIITAFVVISTSQFVALLLVLASKSEKSFLSSGDLVVCSAVQLSGFFL 304

Query:   322 CVLGAARITHRAQGITSVATRWHMTATCAS 351
             C+LGAARITHRAQG+  +ATRWHM  TCAS
Sbjct:   305 CLLGAARITHRAQGVVCIATRWHMALTCAS 334


GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005773 "vacuole" evidence=IDA
TAIR|locus:2092424 AT3G20300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008046 AT1G50630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141481 AT4G03820 "AT4G03820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132045 MRB1 "AT4G22270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008828 AT1G67570 "AT1G67570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.147.212.1
hypothetical protein (409 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query451
pfam12056398 pfam12056, DUF3537, Protein of unknown function (D 1e-142
>gnl|CDD|221398 pfam12056, DUF3537, Protein of unknown function (DUF3537) Back     alignment and domain information
 Score =  412 bits (1062), Expect = e-142
 Identities = 178/403 (44%), Positives = 239/403 (59%), Gaps = 16/403 (3%)

Query: 41  DELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPV 100
           DELR+FR  L+W   DHSS  G  +S+  F  LA+ VP IS   +       DC  D   
Sbjct: 4   DELRSFRSLLRWVCFDHSSPCGAALSWSVFFLLAVAVPAISHFLLPCR----DCDFDHRR 59

Query: 101 SFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRY 160
            F+ LVQ   S  A V F  LSR+F KYGLR  LFLD L +DS  VR GYT E+ ++FR 
Sbjct: 60  PFDVLVQLSLSAFAAVSFLCLSRWFRKYGLRKFLFLDKLSDDSDRVRLGYTAEIKRSFRL 119

Query: 161 LACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVC 220
           LA  +LP F +E  +KI ++++     P  G      S+   +  LASW+YRT ++LLVC
Sbjct: 120 LAYFVLPCFLLEAVYKIWWYASGGSQIPFIGNPVLSLSVACTLE-LASWMYRTTIFLLVC 178

Query: 221 VMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLV 280
           V+FRL C L ILR +    +FEG    SD   + +EHLRIR+QLS  SHR+R FI+ SL+
Sbjct: 179 VLFRLICHLQILRLDDFAKLFEGE---SDVESVLKEHLRIRRQLSIISHRFRKFILLSLL 235

Query: 281 VISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVA 340
           +++ SQ  ALLL      + +  + GEL +CS V +SG F+C+  AA+ITH+AQ +TS+A
Sbjct: 236 LVTASQFAALLLTTAASGEVNILNGGELALCSVVLVSGLFICLHSAAKITHKAQAVTSLA 295

Query: 341 TRWHMTATCASVGGSD--SGKGNAGEAADHDQCRDSTSSSSDSDSSSDI-----NIKVLS 393
           ++WH  ATC+S   +   +       AA +   R  +SSSS SD S D      N K++ 
Sbjct: 296 SKWHACATCSSFDTTVDETPTSVLLPAASNLVLRPVSSSSSSSDESGDEEDDLDNTKIMP 355

Query: 394 SQEPP-SFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAF 435
           S     SFQ RQALV YL++N  GIT++GF +DR  LHTIF  
Sbjct: 356 SYARTISFQKRQALVTYLENNRAGITVYGFTVDRTWLHTIFMI 398


This family of transmembrane proteins are functionally uncharacterized. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length. Length = 398

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 451
PF12056398 DUF3537: Protein of unknown function (DUF3537); In 100.0
PF08395372 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013 95.89
PF02949313 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 A 80.09
>PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised Back     alignment and domain information
Probab=100.00  E-value=1.1e-166  Score=1251.62  Aligned_cols=389  Identities=51%  Similarity=0.848  Sum_probs=355.8

Q ss_pred             chHHHHHHHHhhhhhhcccCCCcchhHHHHHHHHHHHHHHhhhhhhhccCCCCCCcccCCCCcccccccccchhhHHHHH
Q 013040           38 LLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVG  117 (451)
Q Consensus        38 ~~~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~~lav~vP~~~~~~~~~~~c~~~cd~~~~~~f~~~Vq~s~s~lAavS  117 (451)
                      |++||||+||++|+|||+||||++++++||++|+++|++||++++++++||    +||++|++|||++||+|||++|+||
T Consensus         1 h~~deL~~fr~~L~w~~~dqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~----~cd~~~~~~f~~~Vq~s~s~lAavs   76 (398)
T PF12056_consen    1 HARDELRSFRSFLRWCGLDQSSPLSAALSWSVFLLLAVAVPAASHFLLSCP----SCDKYHIRPFEKLVQLSQSALAAVS   76 (398)
T ss_pred             CchhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CchhcCCCchhHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999777    7899999999999999999999999


Q ss_pred             HHHHhhhhhhcccceeecccccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhheeEEEeecccCCCCCCCCcch
Q 013040          118 FFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWIN  197 (451)
Q Consensus       118 f~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~wy~~v~~~iP~~~~~~~~~  197 (451)
                      |+|||+|+||||||||||+||++|||++||+||++||++|||+|++|+||||++|+|||||||++|++++||++|++||+
T Consensus        77 f~cLS~~~rkyGlRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~~~ki~~~~~~~~~~P~~~~~~~~~  156 (398)
T PF12056_consen   77 FLCLSHFLRKYGLRRFLFLDKLRDDSEEVRRGYTRQLNRSFRLLACWVLPCFLVEAAYKIWWYSSVAVQIPYIGHPSWWN  156 (398)
T ss_pred             HHHHHHHhHhcCceeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEeeccccCCccCCccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeccchhhhhcccCCCCCHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 013040          198 SIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIA  277 (451)
Q Consensus       198 s~v~~~l~l~SW~YrT~ifll~CVLFrLiC~LQILR~e~~~klfe~~~~~sDv~~il~EH~RIR~qL~~ISHRfR~Fil~  277 (451)
                      + ++|+++++||+|||+|||++||||||+|||||||||||+|+||+   ++||++||+||+|||+||+|||||||+|||+
T Consensus       157 s-va~~l~l~SW~YrT~ifl~~CvLFrLiC~LQiLr~~~~~klfe~---~sdv~~il~EH~RiR~qL~~ISHRfR~Fil~  232 (398)
T PF12056_consen  157 S-VACLLELASWLYRTTIFLLVCVLFRLICNLQILRFEGYAKLFER---DSDVGVILEEHLRIRRQLSKISHRFRIFILL  232 (398)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheehHhHHHHHcc---CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            9 99999999999999999999999999999999999999999988   6999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCccceeccCceeeehhhHhHHHHHhhhhhhHHHhhhhhhhhHhhhhhhheeecccCCCC-
Q 013040          278 SLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSD-  356 (451)
Q Consensus       278 ~l~~VTaSQf~sLl~~t~~~~~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHRAQ~I~siAskWHa~aT~~s~~~~~-  356 (451)
                      ||++||+|||++||+||++++++||+|+|||||||+|||+|++||||||||||||||+|||+||||||+|||+|+|.++ 
T Consensus       233 ~l~~VTaSQf~sLl~~t~~~~~inf~~~GdlavcS~vqv~Gl~iCL~~AaKITHrAQ~I~siAskWHa~aTc~s~d~~~~  312 (398)
T PF12056_consen  233 SLLLVTASQFVSLLQTTRSKGDINFFNAGDLAVCSVVQVSGLFICLHGAAKITHRAQAITSIASKWHACATCSSFDSDQG  312 (398)
T ss_pred             HHHHHHHHHHHHHHHHhccccceeEeeccceeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheecccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999986332 


Q ss_pred             CCCCCC-CCccCCCC-CCCCCCCCCC-----CCCCcccccccCCCC-CCchHHhHHHHHHHhhcCCCceEEEEEEeehhh
Q 013040          357 SGKGNA-GEAADHDQ-CRDSTSSSSD-----SDSSSDINIKVLSSQ-EPPSFQIRQALVAYLQHNNGGITLFGFALDRGL  428 (451)
Q Consensus       357 ~~~~~~-~~~~~~~~-~~~~~~~~sd-----~e~~~~~~~~~~~~~-~~~SfqkRQAlVtYLq~N~~GITvfGf~lDR~~  428 (451)
                      ++|++. .+.+.++. ....++|+||     +||+.++ ++..+.+ +++||||||||||||||||||||||||+|||||
T Consensus       313 ~~p~~~~~~~~~~~~~~~~~~~~~sd~es~d~~~~~~~-~~~~~~~~~~~SfqKRQALVtYLq~N~aGITvfGf~lDR~~  391 (398)
T PF12056_consen  313 ETPTSDSLSAAANPFPSAGINSSSSDDESGDEEDDLDN-TKQLPSYADMISFQKRQALVTYLQNNRAGITVFGFVLDRGL  391 (398)
T ss_pred             cCCCCCccccccccccCCCCCCCccchhhcccCCCCCc-cccccccchhHHHHHHHHHHHHHhcCCCCeEEEEEEeehHH
Confidence            344432 11111111 1112222222     2333333 4554544 599999999999999999999999999999999


Q ss_pred             HHHHHHH
Q 013040          429 LHTIFAF  435 (451)
Q Consensus       429 LhTIF~~  435 (451)
                      ||||||+
T Consensus       392 LhTIF~i  398 (398)
T PF12056_consen  392 LHTIFMI  398 (398)
T ss_pred             HHHHhhC
Confidence            9999985



This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length.

>PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly) Back     alignment and domain information
>PF02949 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 All known members of this group are seven-transmembrane proteins that are candidate odorant receptors in Drosophila Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00