Citrus Sinensis ID: 013416

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
Protein Sequence
MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDAEYSDDSTEYVDDDEEEF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHccccEEEEEEEEEEEEEEcccccccccccEEEEEccccccccEEcEEEEEEcccccEEEEEEEcccEEEEcccccEEEcccccccccccccccccHHHHHcccccccccccccccccccccccccccccEEEEEcccHHHHHHHccccEEEEEEEcccccccccccEEEEEccEEEEEEcccccccEEEEEcccccccccccccccEEEcccccEEEEEEEccccccccccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEcccEEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHcccccEccccccHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccEEEEccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcEEEEEEEEEEcccccEccccccEEEEcccccccccccEEEEEccccEEEEEEEEEccEEEEccccEEEEEEccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHcccEcccccEEEEEEEccHHHHHHccccccEEEEEEEEEEccccccEEEEEEcccEEEEEccccccEEEEEEEcHccHcccccccEEEEEccccEEEEEEEEcccccccccEEEEEEEEEEEEEEccccccccccccHHHHccccccccEEcccccccccccccccccccccEEEEEEcccccccEEEccccHccc
Coil and Loop (DISEMBL)
mrklcpnfdredgletvlevpipeemftgnknnnntthRSWQNVKswikphserstsmsttalfggknTEIQLLLGvvgapliplpipsshhdhhhpivdkdhpieASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEfcagegslndRLVKVRHlkkgvgggemggfvlwqkrpdlwCLELVVSGrkisagsdgklawrqtpwhhshasrgpprplrrflqgldprstanlfSNSVLCVMEktinnedcFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLkdshllriktpgnnnsiFWETTMESLIQDyrfidginvahtgrtsvslfrfgenseshtrtKMEEIWTIEEvdfnieglsmdcflppgdlrkeedhgcdvitsnpklpfkiraasfrVSASKVVAIdaeysddsteyvdddeeef
Flexible Loop (DISEMBL)
mrklcpnfdredgletvlevpipeemftgnknnnntthrsWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKgvgggemggfvlWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPwhhshasrgpprpLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLriktpgnnnsiFWETTMESLIQDYRFIDGINVAHTgrtsvslfrfgenseshtrtkmeeIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVItsnpklpfkiraasfrvsaskvvaidaeysddsteyvdddeEEF
Low Complexity Region (SEG)
MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLiplpipsshhdhhhpivdkdhpiEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKgvgggemggFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDAEYSDDSTEYVDDDEEEF
Disordered region (IsUnstruct)
*************************************************************ALFGGKNTEIQLLLGVVGAPLIPL***********************MAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPW****************L******STANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGE*******TKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDA*****************
Disordered Region (DISOPRED)
MRKLCPNFDREDGLETVLEVPIP********************VKSWIKP*******************EIQLLLGVVGAPLIPLPIPSSHHD************EASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAA****************************MGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQ*****************RFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEA**********VEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDL******************************SKVVAIDAEYSDDSTEYVD**E***
Disordered Region (DISEMBL)
MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQ*************RPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDAEY***************
Disordered Region (DISPRO)
**KLCPNFDREDGLETVLEVPIPEEMFTG**********SWQNVKSW*************TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDAEYSDDSTEYV*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASKVVAIDAEYSDDSTEYVDDDEEEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	443
224101077	428	predicted protein [Populus trichocarpa]	0.927	0.960	0.782	0.0
255579104	425	conserved hypothetical protein [Ricinus	0.923	0.962	0.766	0.0
225449248	426	PREDICTED: uncharacterized protein LOC10	0.925	0.962	0.753	0.0
147798421	426	hypothetical protein VITISV_019369 [Viti	0.925	0.962	0.751	1e-180
224109412	378	predicted protein [Populus trichocarpa]	0.851	0.997	0.798	1e-180
356539915	436	PREDICTED: uncharacterized protein LOC10	0.961	0.977	0.685	1e-177
356568803	439	PREDICTED: uncharacterized protein LOC10	0.963	0.972	0.690	1e-174
357461069	489	hypothetical protein MTR_3g069720 [Medic	0.966	0.875	0.660	1e-171
297810687	432	hypothetical protein ARALYDRAFT_487384 [	0.943	0.967	0.680	1e-168
15239255	439	uncharacterized protein [Arabidopsis tha	0.936	0.945	0.687	1e-168

>gi|224101077|ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1| predicted protein [Populus trichocarpa]

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/427 (78%), Positives = 373/427 (87%), Gaps = 16/427 (3%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           MRKLCPNFDREDGLETVLEVPIPEEMF  NK++N    RSWQN+K+W++PHSERS     
Sbjct: 1   MRKLCPNFDREDGLETVLEVPIPEEMFASNKHSN----RSWQNMKAWMRPHSERSM---- 52

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVAS 120
           T LFGGKNTEIQLLLGVVGAPLIPL I   H   +  I  KD PIEASMAKYIV+QY+A+
Sbjct: 53  TTLFGGKNTEIQLLLGVVGAPLIPLQIRCDHQLINCNI--KDQPIEASMAKYIVQQYIAA 110

Query: 121 VGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQK 180
           VGGE+ALNS+DSMYAMGKVKM ASEFCAGEGSLN   V +R   +  GGGEMGGFVLWQK
Sbjct: 111 VGGERALNSVDSMYAMGKVKMEASEFCAGEGSLNSNKV-LRVKNQNHGGGEMGGFVLWQK 169

Query: 181 RPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLF 240
           RPDLWCLELVVSG KISAGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDP+STANLF
Sbjct: 170 RPDLWCLELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLF 229

Query: 241 SNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKD 300
           SNSV C  EK INNEDCF+LK+EAE S+LRARS+SNVEIIRHT+WGYFSQRTGLLVQL+D
Sbjct: 230 SNSV-CTGEKAINNEDCFVLKLEAEPSSLRARSSSNVEIIRHTLWGYFSQRTGLLVQLED 288

Query: 301 SHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTK 360
           SHLLRIK  G N+SIFWETTMES IQDYR IDGIN+A+ GRTSVSLFRFGE SESH+RT+
Sbjct: 289 SHLLRIKASG-NDSIFWETTMESTIQDYRTIDGINIAYKGRTSVSLFRFGETSESHSRTR 347

Query: 361 MEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCD--VITSNPKLPFKIRAASFRVSA 418
           MEE+W IEEVDFNI+GLSMDCFLPP D++KEE+ GCD  VI++N +LPFKIR+AS R++A
Sbjct: 348 MEEVWAIEEVDFNIKGLSMDCFLPPSDIKKEEE-GCDNVVISNNARLPFKIRSASSRINA 406

Query: 419 SKVVAID 425
           SKVVA+D
Sbjct: 407 SKVVAVD 413

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579104|ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis] gi|223530049|gb|EEF31970.1| conserved hypothetical protein [Ricinus communis]

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/424 (76%), Positives = 370/424 (87%), Gaps = 15/424 (3%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           MRKLCPNFDREDGL+TVLEVPIPEEMF  NKN N    RSWQN+K+WI+P +++S +   
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFGSNKNGN----RSWQNMKAWIRPQTDKSIA--- 53

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVAS 120
             LFGGKNTEIQLLLGVVGAPLIPLPI   H   +  +  KD PIEASMAKYIV+QY+A+
Sbjct: 54  -NLFGGKNTEIQLLLGVVGAPLIPLPIRCDHQFINRNM--KDEPIEASMAKYIVQQYIAA 110

Query: 121 VGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQK 180
           VGGE ALNS+DSMYAMGKV+MAASEFCAGEGSLN++++KV++++ G  GGEMGGFVLWQK
Sbjct: 111 VGGEGALNSVDSMYAMGKVRMAASEFCAGEGSLNNKVLKVKNMRNG--GGEMGGFVLWQK 168

Query: 181 RPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLF 240
           RPDLWCLELVVSG KISAGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDP+STANLF
Sbjct: 169 RPDLWCLELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLF 228

Query: 241 SNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKD 300
           SNS+ C  EK IN EDCFILK+EAE S+LRARSTSNVE+IRHTVWGYFSQRTGLLVQL+D
Sbjct: 229 SNSI-CAGEKAINGEDCFILKLEAETSSLRARSTSNVEMIRHTVWGYFSQRTGLLVQLED 287

Query: 301 SHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTK 360
           SHLLRIK  G N+SIFWET+MES I DYR IDGIN+AH GRTSVSLFRFGENSESH+RT+
Sbjct: 288 SHLLRIKASG-NDSIFWETSMESTIHDYRTIDGINIAHGGRTSVSLFRFGENSESHSRTR 346

Query: 361 MEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSASK 420
           MEE+WTIEEVDFNI+GLSMDCFLPP DL+K+ +    V+T N KLP K+R+ S R+S+SK
Sbjct: 347 MEEVWTIEEVDFNIKGLSMDCFLPPSDLKKDGEESY-VVTGNAKLPLKMRSTSTRISSSK 405

Query: 421 VVAI 424
           VVAI
Sbjct: 406 VVAI 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449248|ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera] gi|296086114|emb|CBI31555.3| unnamed protein product [Vitis vinifera]

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/426 (75%), Positives = 361/426 (84%), Gaps = 16/426 (3%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           MRKLCPNFDREDGL+TVLEVPIPEEMF  +K    +T  SWQNVKSW+K + ERS     
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHK----STSLSWQNVKSWMKSNPERSA---- 52

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVAS 120
           T++FGG+NTEIQLLLGVVGAPLIPLP+    H  +  I  KDHPIEASMAKYIV+QY+A+
Sbjct: 53  TSIFGGRNTEIQLLLGVVGAPLIPLPVRCDRHPINQSI--KDHPIEASMAKYIVQQYIAA 110

Query: 121 VGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQK 180
            GGE ALNSIDSMYAMGKV+M  SEF AGE   N + +KV+ ++ G  GGEMGGFVLWQK
Sbjct: 111 AGGETALNSIDSMYAMGKVRMVTSEFSAGEVCKN-KAMKVKGVRHG--GGEMGGFVLWQK 167

Query: 181 RPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLF 240
           RP+LWCLELVVSG KISAGSDG +AWRQTPWHHSHASRGPPRPLRR LQGLDPRSTANLF
Sbjct: 168 RPELWCLELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLF 227

Query: 241 SNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKD 300
           SNSV C+ EKTIN EDCFILK+E E S LRARS+ NVEI+RHTVWGYFSQRTGLLVQL D
Sbjct: 228 SNSV-CIGEKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVWGYFSQRTGLLVQLAD 286

Query: 301 SHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTK 360
           +HLLRIK+   ++SIFWETTMESLIQDYR IDG+N+AH G T+VSLFRFGENSESH+RT+
Sbjct: 287 THLLRIKSSA-DDSIFWETTMESLIQDYRTIDGVNIAHAGTTAVSLFRFGENSESHSRTR 345

Query: 361 MEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVIT-SNPKLPFKIRAASFRVSAS 419
           MEE WTIEEVDFNI+GLS DCFLPPGDL+K ++ GCDV+  SN KLPFKI AAS RVSA+
Sbjct: 346 MEERWTIEEVDFNIKGLSTDCFLPPGDLKKVDEEGCDVVVGSNTKLPFKIPAASSRVSAA 405

Query: 420 KVVAID 425
           KVVAID
Sbjct: 406 KVVAID 411

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798421|emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/426 (75%), Positives = 359/426 (84%), Gaps = 16/426 (3%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           MRKLCPNFDREDGL+TVLEVPIPEEMF  +K    +T  SWQNVKSW+K + ERS     
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHK----STSLSWQNVKSWMKSNPERSA---- 52

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVAS 120
           T++FGG+N EIQLLLGVVGAPLIPL +    H  +  I  KDHPIEASMAKYIV+QY+A+
Sbjct: 53  TSIFGGRNXEIQLLLGVVGAPLIPLXVRCDRHPINQSI--KDHPIEASMAKYIVQQYIAA 110

Query: 121 VGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQK 180
            GGE ALNSIDSMYAMGKV M ASEF AGE   N + +KV+ ++ G  GGEMGGFVLWQK
Sbjct: 111 AGGETALNSIDSMYAMGKVTMMASEFSAGEVCKN-KAMKVKGVRHG--GGEMGGFVLWQK 167

Query: 181 RPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLF 240
           RP+LWCLELVVSG KISAGSDG +AWRQTPWHHSHASRGPPRPLRR LQGLDPRSTANLF
Sbjct: 168 RPELWCLELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLF 227

Query: 241 SNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKD 300
           SNSV C+ EKTIN EDCFILK+E E S LRARS+ NVEI+RHTVWGYFSQRTGLLVQL D
Sbjct: 228 SNSV-CIGEKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVWGYFSQRTGLLVQLAD 286

Query: 301 SHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTK 360
           +HLLRIK+   ++SIFWETTMESLIQDYR IDG+N+AH G T+VSLFRFGENSESH+RT+
Sbjct: 287 THLLRIKSSA-DDSIFWETTMESLIQDYRTIDGVNIAHAGTTAVSLFRFGENSESHSRTR 345

Query: 361 MEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVIT-SNPKLPFKIRAASFRVSAS 419
           MEE WTIEEVDFNI+GLS DCFLPPGDL+K ++ GCDV+  SN KLPFKI AAS RVSA+
Sbjct: 346 MEERWTIEEVDFNIKGLSXDCFLPPGDLKKVDEEGCDVVVGSNTKLPFKIPAASSRVSAA 405

Query: 420 KVVAID 425
           KVVAID
Sbjct: 406 KVVAID 411

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109412|ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1| predicted protein [Populus trichocarpa]

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/392 (79%), Positives = 347/392 (88%), Gaps = 15/392 (3%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           MRKLCPNFDREDGL+TVLEVPIPEEMF  NK+ N    RSWQN+K+W++PH+ERS     
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFASNKHGN----RSWQNMKAWMRPHNERSM---- 52

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVAS 120
           T  FGGKNTEIQ LLGVVGAPLIPLPI   H   +  I  KDHPIE+SMAKYIV+QY+A+
Sbjct: 53  TTRFGGKNTEIQFLLGVVGAPLIPLPILCDHQFINRNI--KDHPIESSMAKYIVQQYIAA 110

Query: 121 VGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLND-RLVKVRHLKKGVGGGEMGGFVLWQ 179
           VGGE+ALNS+DSMYAMGKVKM ASEFCAGEGSLN+ + +KV++ K G  GGEMGGFVLW+
Sbjct: 111 VGGERALNSVDSMYAMGKVKMVASEFCAGEGSLNNNKTLKVKNQKHG--GGEMGGFVLWK 168

Query: 180 KRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANL 239
           KRPDLWCLELVVSG KISAGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDP+STANL
Sbjct: 169 KRPDLWCLELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANL 228

Query: 240 FSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLK 299
           FSNSV C  EKTINNEDCF+LK+EA+ S+LRARSTSNVEIIRHTVWGYFSQRTGLLVQL+
Sbjct: 229 FSNSV-CTGEKTINNEDCFVLKLEADPSSLRARSTSNVEIIRHTVWGYFSQRTGLLVQLE 287

Query: 300 DSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRT 359
           DSHLLRIK PG N+SIFWETTMES IQDYR IDGIN+A+ GRTSVSLFRFGE SESH+RT
Sbjct: 288 DSHLLRIKAPG-NDSIFWETTMESSIQDYRTIDGINIAYKGRTSVSLFRFGETSESHSRT 346

Query: 360 KMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKE 391
           +MEEIW IEEVDFNI+GLSMDCFLPP DL+KE
Sbjct: 347 RMEEIWAIEEVDFNIKGLSMDCFLPPSDLKKE 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539915|ref|XP_003538438.1| PREDICTED: uncharacterized protein LOC100783667 [Glycine max]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/448 (68%), Positives = 366/448 (81%), Gaps = 22/448 (4%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSE-RSTSMS 59
           M+KLCPN DREDGLETVLEVPIPEE+ T    + + T ++W N+K+W+KPH+E RS S S
Sbjct: 1   MKKLCPNLDREDGLETVLEVPIPEEILT----HKSGTTKAWHNMKNWMKPHAESRSNSAS 56

Query: 60  TTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVA 119
             A+FGGKNTEIQLLLGVVGAPLIP PI S +      I  KD  IE SMAKYIVKQYVA
Sbjct: 57  MAAVFGGKNTEIQLLLGVVGAPLIPSPIASDNQPITRSI--KDQHIEVSMAKYIVKQYVA 114

Query: 120 SVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQ 179
           +VGGE+ALNS+DSMYAMG+VKMA SEF AGEGS+N + VK   +K     GE+GGFV+WQ
Sbjct: 115 AVGGERALNSVDSMYAMGQVKMATSEFSAGEGSVNSKKVKNLQMK-----GEVGGFVVWQ 169

Query: 180 KRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANL 239
           KRP+LWCLELVVSG KISAGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANL
Sbjct: 170 KRPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANL 229

Query: 240 FSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLK 299
           FSNS+ C+ EKT+NNEDCFILK+EAE+S LRARS SNVEI+RHTVWGYFSQRTGLLVQL+
Sbjct: 230 FSNSI-CIGEKTVNNEDCFILKLEAESSTLRARSNSNVEIVRHTVWGYFSQRTGLLVQLE 288

Query: 300 DSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRT 359
           DSHLL++K+   + SI+WET MESLIQDYR +DGI VAH G+T VSLFRFG   E+H+RT
Sbjct: 289 DSHLLKLKS-HESESIYWETNMESLIQDYRTVDGIQVAHAGKTWVSLFRFGGGPETHSRT 347

Query: 360 KMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDH--------GCDVITSNPKLPFKIRA 411
           +MEE+W +EEVDFN++GLS+DCFLPP DL++EE+         G  +  +N KLP+KIR+
Sbjct: 348 RMEEVWQVEEVDFNVKGLSIDCFLPPSDLKREEEENDQECGGGGVAISNNNAKLPYKIRS 407

Query: 412 ASFRVSASKVVAIDAEYSDDSTEYVDDD 439
           ASFR+SASKV A++ + S  ++   D+D
Sbjct: 408 ASFRISASKVAAVNLDDSSCTSSESDED 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568803|ref|XP_003552597.1| PREDICTED: uncharacterized protein LOC100782214 [Glycine max]

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/449 (69%), Positives = 371/449 (82%), Gaps = 22/449 (4%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSE-RSTSMS 59
           M+KLCPN DREDGLETVLEVPIPEE+ T    + + T ++W N+K+W+KPH+E RS S S
Sbjct: 1   MKKLCPNLDREDGLETVLEVPIPEEILT----HKSGTTKAWHNMKNWMKPHAESRSNSAS 56

Query: 60  TTALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHHHPIVDKDHPIEASMAKYIVKQYVA 119
             A+FGGKNTEIQLLLGVVGAPLIP PI   +      I  KD  IE SMAKYIVKQYVA
Sbjct: 57  MAAVFGGKNTEIQLLLGVVGAPLIPSPIAPDNQPITRSI--KDQHIEVSMAKYIVKQYVA 114

Query: 120 SVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDR-LVKVRHLKKGVGGGEMGGFVLW 178
           +VGGE+ALNS+DSMYAMG+VKMAASEF AGEGS+N + +VKV++L+     GE+GGFV+W
Sbjct: 115 AVGGERALNSVDSMYAMGQVKMAASEFSAGEGSVNSKKMVKVKNLQMK---GEVGGFVVW 171

Query: 179 QKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTAN 238
           QKRP+LWCLELVVSG KI+AGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTAN
Sbjct: 172 QKRPELWCLELVVSGYKITAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTAN 231

Query: 239 LFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQL 298
           LFSNS+ C+ EKT+NNEDCFILK+EAE+S LRARS SNVEI+RHTVWGYFSQRTGLLVQL
Sbjct: 232 LFSNSI-CIGEKTVNNEDCFILKLEAESSTLRARSNSNVEIVRHTVWGYFSQRTGLLVQL 290

Query: 299 KDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTR 358
           +DSHLL++K+   + SI+WET MESLIQDYR +DGI VAH G+T VSLFRFG   E+H+R
Sbjct: 291 EDSHLLKLKS-HESESIYWETNMESLIQDYRSVDGIQVAHAGKTRVSLFRFGGGPETHSR 349

Query: 359 TKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDH-----GCDVITS----NPKLPFKI 409
           T+MEE+W +EEVDFN++GLS+DCFLPP DL++EE+      G  V+ S    N KLP+KI
Sbjct: 350 TRMEEVWQVEEVDFNVKGLSIDCFLPPSDLKREEEENEESCGGGVVASNNNNNAKLPYKI 409

Query: 410 RAASFRVSASKVVAIDAEYSDDSTEYVDD 438
           R+ASFR+SASKV A++ + S  S+E  +D
Sbjct: 410 RSASFRISASKVAAVNLDDSCTSSESDED 438

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461069|ref|XP_003600816.1| hypothetical protein MTR_3g069720 [Medicago truncatula] gi|355489864|gb|AES71067.1| hypothetical protein MTR_3g069720 [Medicago truncatula]

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 299/453 (66%), Positives = 368/453 (81%), Gaps = 25/453 (5%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMST 60
           + KL PN DREDGLETVLEVPIPEE+FT    + + T ++WQNVK W+KP++  + + S 
Sbjct: 49  LDKLSPNLDREDGLETVLEVPIPEEIFT----HKSGTMKAWQNVKFWMKPNAAEAKAASM 104

Query: 61  TALFGGKNTEIQLLLGVVGAPLIPLPIPSSHHDHH--HPIVDKDHPIEASMAKYIVKQYV 118
           TA+FGG+N+EIQLLLGVVGAPLIP PI +S  ++    P + KD  IE SMAKYI+KQYV
Sbjct: 105 TAVFGGRNSEIQLLLGVVGAPLIPSPIINSSDNYQLITPSI-KDQRIEVSMAKYIMKQYV 163

Query: 119 ASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLND-----RLVKVRHLKKGVGGGEMG 173
           A+VGGE+ALNS+DSMYAMG+VKMA SEF +GE  +N      ++VKV++++     GEMG
Sbjct: 164 AAVGGERALNSVDSMYAMGQVKMATSEFSSGERGVNSNNNNKKMVKVKNVEMK---GEMG 220

Query: 174 GFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDP 233
           GFV+WQKRP+LWCLELVVSG KISAGSDGK+AWRQTPWHHSHASRGPPRPLRRFLQGLDP
Sbjct: 221 GFVVWQKRPELWCLELVVSGNKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDP 280

Query: 234 RSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTG 293
           RSTANLFS SV C+ EKT+N EDCFILK+EAE+SALRARS SNVEI+RHTVWGYFSQRTG
Sbjct: 281 RSTANLFSTSV-CIGEKTVNKEDCFILKLEAESSALRARSNSNVEIVRHTVWGYFSQRTG 339

Query: 294 LLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENS 353
           LLVQL+DSHLL++K+    + ++WET MESLIQDYR +DGI +AH G+T VSLFRFGE  
Sbjct: 340 LLVQLEDSHLLKLKS-SETDCVYWETNMESLIQDYRTVDGIQIAHAGKTKVSLFRFGEGP 398

Query: 354 ESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDH----GCDVIT-SNPKLPFK 408
           E+ +RT+MEE+W +EEVDFNI+GLS+DCFLPP DL++E++     G  V+T +N KLP+K
Sbjct: 399 ETRSRTRMEEVWQVEEVDFNIKGLSIDCFLPPSDLKREQEETGQCGGGVVTGTNAKLPYK 458

Query: 409 IRAASFRVSASKVVAIDAEYSDDSTEYVDDDEE 441
           IR+ASFR+S SKV A++    DDS    + DE+
Sbjct: 459 IRSASFRISTSKVAAVNL---DDSCTTSESDED 488

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810687|ref|XP_002873227.1| hypothetical protein ARALYDRAFT_487384 [Arabidopsis lyrata subsp. lyrata] gi|297319064|gb|EFH49486.1| hypothetical protein ARALYDRAFT_487384 [Arabidopsis lyrata subsp. lyrata]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/438 (68%), Positives = 359/438 (81%), Gaps = 20/438 (4%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKS-WIKPHSERSTSM- 58
           MRKLCPN++ EDGLETVLEVP+PEE+F  +K     T   W  +KS W KP +  + +  
Sbjct: 1   MRKLCPNYNLEDGLETVLEVPMPEELFAASK-----TKPGWNQMKSYWSKPTATATGTAT 55

Query: 59  --STTALFGGKNTEIQLLLGVVGAPLIPLPI-PSSHHDHHHPIVD--KDHPIEASMAKYI 113
             + T LFGG+N EIQLLLGVVGAPLIPLP+ P   +D+ +PI    KD P+E SMA+YI
Sbjct: 56  ATNMTRLFGGRNAEIQLLLGVVGAPLIPLPVQPEQQNDYENPIHKDIKDQPLEMSMAQYI 115

Query: 114 VKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMG 173
           VKQY+A+VGG++ALN+++SMYAMGKV+M ASEFC GEGSLN ++VK R +K G  GGE+G
Sbjct: 116 VKQYIAAVGGDRALNAVESMYAMGKVRMTASEFCTGEGSLNSKMVKARSIKSG--GGEVG 173

Query: 174 GFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDP 233
           GFVLWQK  +LWCLELVVSG KISAGSD K+AWRQTPWH SHASRGPPRPLRRFLQGLDP
Sbjct: 174 GFVLWQKGIELWCLELVVSGCKISAGSDAKVAWRQTPWHPSHASRGPPRPLRRFLQGLDP 233

Query: 234 RSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTG 293
           +STANLF+ SV C+ EK IN+EDCFILK++AE SAL+ARS+SNVEIIRHTVWG FSQRTG
Sbjct: 234 KSTANLFARSV-CMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGCFSQRTG 292

Query: 294 LLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENS 353
           LL+QL+DSHLLRIK   ++NSIFWETTMESLIQDYR +DGI VAH G++SVSLFRFGENS
Sbjct: 293 LLIQLEDSHLLRIKAQ-DDNSIFWETTMESLIQDYRTVDGIQVAHAGKSSVSLFRFGENS 351

Query: 354 ESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRK----EEDHGCDVITSNPKLPFKI 409
           ++H+RT+MEE W IEE+DFNI+GLSMDCFLPP DL+K    EE+  C +  +N KLP KI
Sbjct: 352 DNHSRTRMEETWEIEEMDFNIKGLSMDCFLPPSDLKKDDDEEEEIECGLAANNEKLPMKI 411

Query: 410 RAASFRVSASKVVAIDAE 427
           R+AS R+S+SK++AI  E
Sbjct: 412 RSASLRISSSKILAIMEE 429

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239255|ref|NP_196203.1| uncharacterized protein [Arabidopsis thaliana] gi|9759109|dbj|BAB09678.1| unnamed protein product [Arabidopsis thaliana] gi|332003548|gb|AED90931.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/435 (68%), Positives = 359/435 (82%), Gaps = 20/435 (4%)

Query: 1   MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKS-WIKPHSERSTSM- 58
           MRKLCPN++ EDGLETVLEVP+PEE+F  +K     T   W  +KS W KP +  + +  
Sbjct: 1   MRKLCPNYNLEDGLETVLEVPMPEELFAASK-----TKPGWNQMKSYWSKPTATATGTAT 55

Query: 59  --STTALFGGKNTEIQLLLGVVGAPLIPLPI-PSSHHDHHHPIVD--KDHPIEASMAKYI 113
             + T LFGG+N EIQLLLGVVGAPLIPLP+ P  H+D+ +PI    KD P+E SMA+YI
Sbjct: 56  ATNMTRLFGGRNAEIQLLLGVVGAPLIPLPVQPDHHNDYENPIHKDIKDQPLEMSMAQYI 115

Query: 114 VKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMG 173
           VKQY+A+VGG++ALN+++SMYAMGKV+M ASEFC GEGSLN ++VK R +K G  GGE+G
Sbjct: 116 VKQYIAAVGGDRALNAVESMYAMGKVRMTASEFCTGEGSLNSKMVKARSIKSG--GGEVG 173

Query: 174 GFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDP 233
           GFVLWQK  +LWCLELVVSG KISAGSD K+AWRQTPWH SHASRGPPRPLRRFLQGLDP
Sbjct: 174 GFVLWQKGIELWCLELVVSGCKISAGSDAKVAWRQTPWHPSHASRGPPRPLRRFLQGLDP 233

Query: 234 RSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTG 293
           +STANLF+ SV C+ EK IN+EDCFILK++AE SAL+ARS+SNVEIIRHTVWG FSQRTG
Sbjct: 234 KSTANLFARSV-CMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGCFSQRTG 292

Query: 294 LLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENS 353
           LL+QL+DSHLLRIK   ++NSIFWETTMESLIQDYR +DGI VAH G++SVSLFRFGENS
Sbjct: 293 LLIQLEDSHLLRIKAQ-DDNSIFWETTMESLIQDYRTVDGILVAHAGKSSVSLFRFGENS 351

Query: 354 ESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRK----EEDHGCDVITSNPKLPFKI 409
           ++H+RT+MEE W IEE+DFNI+GLSMDCFLPP DL+K    EE+  C +  +N KLP KI
Sbjct: 352 DNHSRTRMEETWEIEEMDFNIKGLSMDCFLPPSDLKKDDDEEEEIECGLAANNEKLPMKI 411

Query: 410 RAASFRVSASKVVAI 424
           R+AS R+S+SKV+AI
Sbjct: 412 RSASLRISSSKVLAI 426

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	443
TAIR|locus:2166414	439	AT5G05840 "AT5G05840" [Arabido	0.963	0.972	0.632	5.9e-144
TAIR|locus:2078946	438	AT3G55720 "AT3G55720" [Arabido	0.943	0.954	0.518	6.6e-113
TAIR|locus:2025207	395	AT1G75160 "AT1G75160" [Arabido	0.853	0.956	0.503	5.3e-95
TAIR|locus:2007268	494	AT1G49840 "AT1G49840" [Arabido	0.866	0.777	0.440	3e-85
TAIR|locus:2101510	485	AT3G19540 "AT3G19540" [Arabido	0.781	0.713	0.476	2.7e-84
TAIR|locus:2173634	370	AT5G66740 "AT5G66740" [Arabido	0.765	0.916	0.488	3.9e-83
TAIR|locus:2199191	433	AT1G27690 "AT1G27690" [Arabido	0.860	0.879	0.424	2.9e-80
TAIR|locus:2206425	417	AT1G79420 "AT1G79420" [Arabido	0.823	0.875	0.392	9.9e-71
TAIR|locus:2144128	368	AT5G06610 "AT5G06610" [Arabido	0.623	0.75	0.419	9.8e-66

TAIR|locus:2166414 AT5G05840 "AT5G05840" [Arabidopsis thaliana (taxid:3702)]

 Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
 Identities = 284/449 (63%), Positives = 343/449 (76%)

Query:     1 MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKS-WIKPHSERS---T 56
             MRKLCPN++ EDGLETVLEVP+PEE+F  +K     T   W  +KS W KP +  +   T
Sbjct:     1 MRKLCPNYNLEDGLETVLEVPMPEELFAASK-----TKPGWNQMKSYWSKPTATATGTAT 55

Query:    57 SMSTTALFGGKNTEIQLLLGVVGAPLX---XXXXXXXXXXXXXXXXXXXXXXEASMAKYI 113
             + + T LFGG+N EIQLLLGVVGAPL                          E SMA+YI
Sbjct:    56 ATNMTRLFGGRNAEIQLLLGVVGAPLIPLPVQPDHHNDYENPIHKDIKDQPLEMSMAQYI 115

Query:   114 VKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKXXXXXXXX 173
             VKQY+A+VGG++ALN+++SMYAMGKV+M ASEFC GEGSLN ++VK R +K         
Sbjct:   116 VKQYIAAVGGDRALNAVESMYAMGKVRMTASEFCTGEGSLNSKMVKARSIKSGGGEVGG- 174

Query:   174 XFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDP 233
              FVLWQK  +LWCLELVVSG KISAGSD K+AWRQTPWH SHASRGPPRPLRRFLQGLDP
Sbjct:   175 -FVLWQKGIELWCLELVVSGCKISAGSDAKVAWRQTPWHPSHASRGPPRPLRRFLQGLDP 233

Query:   234 RSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTG 293
             +STANLF+ SV C+ EK IN+EDCFILK++AE SAL+ARS+SNVEIIRHTVWG FSQRTG
Sbjct:   234 KSTANLFARSV-CMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGCFSQRTG 292

Query:   294 LLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENS 353
             LL+QL+DSHLLRIK   ++NSIFWETTMESLIQDYR +DGI VAH G++SVSLFRFGENS
Sbjct:   293 LLIQLEDSHLLRIKAQ-DDNSIFWETTMESLIQDYRTVDGILVAHAGKSSVSLFRFGENS 351

Query:   354 ESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHG----CDVITSNPKLPFKI 409
             ++H+RT+MEE W IEE+DFNI+GLSMDCFLPP DL+K++D      C +  +N KLP KI
Sbjct:   352 DNHSRTRMEETWEIEEMDFNIKGLSMDCFLPPSDLKKDDDEEEEIECGLAANNEKLPMKI 411

Query:   410 RAASFRVSASKVVAIDAEYSDDSTEYVDD 438
             R+AS R+S+SKV+AI  E  +D +E  ++
Sbjct:   412 RSASLRISSSKVLAIVEE--EDESEVTEE 438

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078946 AT3G55720 "AT3G55720" [Arabidopsis thaliana (taxid:3702)]

 Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
 Identities = 227/438 (51%), Positives = 303/438 (69%)

Query:     1 MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKS-WIKPHSERSTSMS 59
             MR LCPNFDREDGLETVLEVP+PEE+F  + N +     +W++VKS  ++   + S+S++
Sbjct:     1 MRTLCPNFDREDGLETVLEVPMPEELFCSDNNKSG----AWRSVKSSLLRSPPDNSSSLA 56

Query:    60 TTALFGGKNTEIQLLLGVVGAPLXXXXXXXXXXXXXX--XXXXXXXXXEASMAKYIVKQY 117
             T  LFGG++++IQ+LLG+VGAP                          E++MAKYIVKQY
Sbjct:    57 T--LFGGRDSQIQMLLGIVGAPSIPLPISSDQAKIDHPISNLIKNQSIESAMAKYIVKQY 114

Query:   118 VASVGGEKALNSIDSMYAMGKVKMAASEFCAGE---GSLNDRLVKVRHLKKXXXXXXXXX 174
              A+ GGE AL++++SMYAMGKVKM  +EFCA +   G    ++V++R++           
Sbjct:   115 TAAAGGEMALDAVESMYAMGKVKMGVTEFCAAKTLNGKRKKKMVRIRNVNNNNGNGGEMG 174

Query:   175 -FVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPW-HHSHASRGPPRPLRRFLQGLD 232
              FVLW+K    W LELVVSG K+SAG DG + WRQ+PW  HSHAS  P  PLRRFLQGLD
Sbjct:   175 GFVLWKKGSSQWSLELVVSGCKVSAGCDGNVDWRQSPWLAHSHASNEPSGPLRRFLQGLD 234

Query:   233 PRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRT 292
             P++TANLF+ SV CV EK +NNE+CF+LK+E + S L++RS S +E ++HTVWG F QRT
Sbjct:   235 PKTTANLFAGSV-CVGEKAVNNEECFVLKLETQPSGLKSRSKSGMETVKHTVWGCFGQRT 293

Query:   293 GLLVQLKDSHLLRIKTP-GNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGE 351
             GLLVQL+D++L+RIKT   + + + WETT E+LIQDY+ IDGI +AH G+T VSL R  E
Sbjct:   294 GLLVQLEDTYLVRIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSLLRLDE 353

Query:   352 NSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDL--RKEEDHGCDV--ITSNPKLPF 407
             + ESH++T MEE W IEEV FN++GLS D FLPPGDL  ++EE+ G      TS   LP 
Sbjct:   354 SLESHSKTTMEESWEIEEVGFNVKGLSSDFFLPPGDLCIKEEEETGFSFGDYTSPMLLPL 413

Query:   408 KIRAASFRVSASKVVAID 425
             K+   S+++ +SKV AI+
Sbjct:   414 KVSTTSWKIKSSKVTAIE 431

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2025207 AT1G75160 "AT1G75160" [Arabidopsis thaliana (taxid:3702)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 206/409 (50%), Positives = 264/409 (64%)

Query:     1 MRKLCPNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHS-------- 52
             MRKLCPN DREDGLETVLEVP+PEEMFT  K  +N   R W+N+ + +K H+        
Sbjct:     3 MRKLCPNLDREDGLETVLEVPVPEEMFT--KMGSNAQGR-WRNMHALMKAHAVVTAVATD 59

Query:    53 ----ERSTSMSTTALF--GGKNTEIQLLLGVVGAPLXXXXXXXXXXXXXXXXXXXXXXXE 106
                   S+SMS   +      + E   LL +VG+PL                       E
Sbjct:    60 VRTPASSSSMSNVNMHLQSKSDNEFVALLKIVGSPLIPFHVPLEFCLSRPINDTSI---E 116

Query:   107 ASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKX 166
             AS AKYIV+QYVA+ GG  ALN++ SMYA+G+V+M  SE  AGE       V+   L K 
Sbjct:   117 ASTAKYIVQQYVAACGGPTALNAVKSMYAVGQVRMQGSEMVAGEDEGTGTPVR---LGKG 173

Query:   167 XXXXXXXXFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRR 226
                     FVLWQK P+LW LELVVSG KISAGSDGK+AW Q+    S A RGPPRPLRR
Sbjct:   174 SFEVGG--FVLWQKNPNLWFLELVVSGFKISAGSDGKVAWNQSSTQPSQAHRGPPRPLRR 231

Query:   227 FLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWG 286
             F QGLDPR TA+LF ++V C+ E+ +N EDCF+LKVE  +  L+A+ + N E+I HTVWG
Sbjct:   232 FFQGLDPRCTASLFLDAV-CIGEQPVNGEDCFVLKVETPSDILKAQCSPNTEVIHHTVWG 290

Query:   287 YFSQRTGLLVQLKDSHLLRIKTP-GNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVS 345
             YFSQRTGLLV+  D+ L+R+K+  G N+ +FWET+MES+I DY F+D +N+AH G+T  +
Sbjct:   291 YFSQRTGLLVKFGDTKLVRVKSGRGKNDGVFWETSMESIIDDYIFVDAVNIAHGGQTVTT 350

Query:   346 LFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDH 394
             L+R+G  + +H R ++EE W IEEVDFNI GL ++ FLPP D+    DH
Sbjct:   351 LYRYG-GAVNHRR-RIEEKWRIEEVDFNICGLCLESFLPPSDINN--DH 395

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2007268 AT1G49840 "AT1G49840" [Arabidopsis thaliana (taxid:3702)]

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 177/402 (44%), Positives = 245/402 (60%)

Query:    39 RSWQNVKSWIKPHSERSTSM-STTALFGGKNTEIQLLLGVVGAPLXXXXXXXXXXXXXXX 97
             R    +  W+K    R+ S+ STT  +  + ++++LLLGV+GAPL               
Sbjct:   107 RLGSGLSHWVKGQWSRAPSVTSTTPAY--RKSDLRLLLGVMGAPLAPINVSSSSHLLHLT 164

Query:    98 XXXXXXXXEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRL 157
                     E S A+YI++QY A+ GG K  N+I + YAMGK+KM  SE     G++ +R 
Sbjct:   165 IRDSPT--ETSSAQYILQQYTAACGGHKLHNAIKNAYAMGKLKMITSELETPTGTVRNR- 221

Query:   158 VKVRHLKKXXXXXXXXXFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHAS 217
                              FVLWQ  PD+W +EL V G K+ AG +GKL WR TPW  SH +
Sbjct:   222 --------NSTKSETGGFVLWQMNPDMWYVELSVGGSKVRAGCNGKLVWRHTPWLGSHTA 273

Query:   218 RGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNV 277
             +GP RPLRR LQGLDPR+TA +F+ S  CV E+ +N EDCFILK+  +   LRARS    
Sbjct:   274 KGPVRPLRRALQGLDPRTTATMFAESK-CVGERKVNGEDCFILKLCTDPETLRARSEGPA 332

Query:   278 EIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINVA 337
             EI+RH ++GYFSQRTGLL Q++DS L RI++  + ++++WETT+ S + DY+ ++GI +A
Sbjct:   333 EIVRHILFGYFSQRTGLLAQIEDSQLTRIQS-NDGDAVYWETTINSSLDDYKQVEGIMIA 391

Query:   338 HTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEE-DHGC 396
             H+GR+ V+LFRFGE + SHTRTKMEE WTIEEV FN+ GLS+DCF+PP DLR       C
Sbjct:   392 HSGRSVVTLFRFGEVAMSHTRTKMEERWTIEEVAFNVPGLSLDCFIPPADLRSGSLTEAC 451

Query:   397 DVITSNPKLPFKIRAASFRVSASKVVAID-AEYSDDSTEYVD 437
             +      K    +  AS     +KV A++   + +D   ++D
Sbjct:   452 EYSGQEEKGKSSLALASTTAHRAKVAALEKGSFDNDPVWHID 493

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2101510 AT3G19540 "AT3G19540" [Arabidopsis thaliana (taxid:3702)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 172/361 (47%), Positives = 229/361 (63%)

Query:    29 GNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLXXXXXX 88
             G   N   + R    +  W+K    R+ S++ TA +  +  +++LLLGV+GAPL      
Sbjct:    90 GGGGNIGESKRLGSGLGHWVKGQLSRAPSVAATAAY--RRNDLRLLLGVMGAPLAPIHVS 147

Query:    89 XXXXXXXXXXXXXXXXXEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCA 148
                              E S A+YI++QY A+ GG+K  NSI + YAMGK+KM  SE   
Sbjct:   148 SSDPLPHLSIKNTPI--ETSSAQYILQQYTAASGGQKLQNSIKNAYAMGKLKMITSEL-- 203

Query:   149 GEGSLNDRLVKVRHLKKXXXXXXXXXFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQ 208
                    R V+ R+  K         FVLWQ  PD+W +EL V G K+ AG +GKL WR 
Sbjct:   204 ---ETATRTVRNRNPSKAETGG----FVLWQMNPDMWYVELAVGGSKVRAGCNGKLVWRH 256

Query:   209 TPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASA 268
             TPW  SH ++GP RPLRR LQGLDPR+TA +F+ +  C+ EK +N EDCFILK+  +   
Sbjct:   257 TPWLGSHTAKGPVRPLRRGLQGLDPRTTAAMFAEAK-CIGEKKVNGEDCFILKLCTDPET 315

Query:   269 LRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDY 328
             L+ARS    EIIRH ++GYFSQ+TGLLV ++DSHL RI++ G   ++FWETT  S + DY
Sbjct:   316 LKARSEGPAEIIRHVLFGYFSQKTGLLVHIEDSHLTRIQSNGGE-TVFWETTYNSSLDDY 374

Query:   329 RFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDL 388
             R ++GI +AH+G + V+LFRFGE + SHTRTKMEE WTIEEV FN+ GLS+DCF+PP DL
Sbjct:   375 RQVEGIMIAHSGHSVVTLFRFGEVATSHTRTKMEESWTIEEVAFNVPGLSLDCFIPPADL 434

Query:   389 R 389
             +
Sbjct:   435 K 435

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2173634 AT5G66740 "AT5G66740" [Arabidopsis thaliana (taxid:3702)]

 Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
 Identities = 175/358 (48%), Positives = 233/358 (65%)

Query:    35 NTTHRSWQNVKSWIKPHSERSTSMSTTALFGGKNTEIQLLLGVVGAPLXXXXXXXXXXXX 94
             N     WQN+ +W+K  +    S     L   +  E++ LL +VG+PL            
Sbjct:    32 NNVALRWQNMMTWMKAQTSDKWSQP---LIAARINELRFLLYLVGSPLIPLQVQVGHSVH 88

Query:    95 XXXXXXXXXXXEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLN 154
                        +AS AKYIV+QY+A+ GG +ALN+++SM   G+VKM ASEF  G+ S  
Sbjct:    89 KPVKDCSI---QASTAKYIVQQYIAATGGPQALNAVNSMCVTGQVKMTASEFHQGDDS-- 143

Query:   155 DRLVKVRHLKKXXXXXXXXXFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHS 214
                  V +LK          FVLWQK PDLWCLELVVSG K+  GS+G+L+WR +    +
Sbjct:   144 ----GV-NLKSNDEMGG---FVLWQKDPDLWCLELVVSGCKVICGSNGRLSWRHSSNQQT 195

Query:   215 HASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARST 274
              AS G PRPLRRFLQGLDPRSTANLF ++  C+ EK IN EDCFILK+E   +   A+S 
Sbjct:   196 PASTGTPRPLRRFLQGLDPRSTANLFLDAT-CIGEKIINGEDCFILKLETSPAVREAQSG 254

Query:   275 SNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGI 334
              N EII HT+WGYFSQR+GLL+Q +DS LLR++T   +  +FWET+ ES++ DYR++D +
Sbjct:   255 PNFEIIHHTIWGYFSQRSGLLIQFEDSRLLRMRTK-EDEDVFWETSAESVMDDYRYVDNV 313

Query:   335 NVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEE 392
             N+AH G+TSV++FR+GE S +H R +M E W IEEVDFN+ GLS+D FLPP +L+ E+
Sbjct:   314 NIAHGGKTSVTVFRYGEASANHRR-QMTEKWRIEEVDFNVWGLSVDHFLPPANLQIEK 370

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2199191 AT1G27690 "AT1G27690" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 171/403 (42%), Positives = 249/403 (61%)

Query:     6 PNFDREDGLETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERST-SMSTTALF 64
             P+    + L  V+E P P+   +G+  + +   R W N   W+K     +  S+S+++ F
Sbjct:    41 PDRHMSEMLAPVIEGPDPDAEDSGSSGDYSRFERRWYN---WMKCQLPVAPPSVSSSSDF 97

Query:    65 GGKNTEIQLLLGVVGAPLXXXXXXXXXXXXXXXXXXXXXXXEASMAKYIVKQYVASVGGE 124
               K T+++LLLGV+GAPL                       E S A+YI++QY A+ GG+
Sbjct:    98 --KRTDLRLLLGVLGAPLGPVHVSALDLLPHLSIKNTPM--ETSSAQYILQQYTAASGGQ 153

Query:   125 KALNSIDSMYAMGKVKMAASEFCAG-EGSLNDRLVKVRHLKKXXXXXXXXXFVLWQKRPD 183
             K  +S+ + Y MG+++  ASEF  G +GS        +             FVLW   PD
Sbjct:   154 KLHSSVQNGYVMGRIRTMASEFETGSKGS--------KSKNNSSKAVESGGFVLWHMNPD 205

Query:   184 LWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNS 243
             +W +ELV+ G K+ AG DGKL WR TPW   HA++GP RPLRR LQGLDPR+TA +F+N+
Sbjct:   206 MWYMELVLGGSKVLAGCDGKLVWRHTPWLGPHAAKGPVRPLRRALQGLDPRTTAYMFANA 265

Query:   244 VLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHL 303
               C+ EK I+ EDCFILK+ A+ + L+ARS    E IRHT++GYFSQ+TGLLV L+DS L
Sbjct:   266 -RCIGEKKIDGEDCFILKLCADPATLKARSEGASETIRHTLFGYFSQKTGLLVHLEDSQL 324

Query:   304 LRIKTPGNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESH-TRTKME 362
              RI+  G   +++WETT+ S ++DY+ ++GI +AH+GR+  +L RFG+ S  H T+T M+
Sbjct:   325 TRIQNNGGE-AVYWETTINSYLEDYKPVEGIMIAHSGRSVATLLRFGDMSSGHNTKTTMQ 383

Query:   363 EIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDHGCDVITSNPKL 405
             E W I+E+ FN+ GLS+DCF+PP +LR +  H  D ++  PK+
Sbjct:   384 EAWVIDEISFNVPGLSIDCFIPPSELRFDS-HVED-LSQGPKI 424

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2206425 AT1G79420 "AT1G79420" [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 153/390 (39%), Positives = 227/390 (58%)

Query:    14 LETVLEVPIPEEMFTGNKNNNNTTHRSWQNVKSWIKPHSERSTSMSTTAL--------FG 65
             L  ++E P P+      K  +     SW+ ++ W K H   S +MS+ ++          
Sbjct:    20 LTPLMEGPDPDMQDERTKKES-----SWEAIREWFKVHKGISGNMSSPSVQPLCNSYDVP 74

Query:    66 GKNTEIQLLLGVVGAPLXXXXXXXXXXX----XXXXXXXXXXXXEASMAKYIVKQYVASV 121
              K  +++LLLGV+G PL                           E S A YI++QY+A+ 
Sbjct:    75 AKGQDLRLLLGVLGCPLAPISVVVSDLFPDDPLLGSFQIKNVPFETSTAHYIIQQYLAAT 134

Query:   122 GGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKXXXXXXXXXFVLWQKR 181
             G  K   +  +MYA G +KM+  E     G    + VK               FVLWQ +
Sbjct:   135 GCLKRAKAAKNMYATGIMKMSCCETEIAAG----KSVKTLGGGGNGRSGDSGCFVLWQMQ 190

Query:   182 PDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFS 241
             P +W LELV+ G K+ +GSDGK  WR TPW  +HA++GP RPLRR +QGLDP++TA+LF+
Sbjct:   191 PGMWSLELVLGGTKLISGSDGKTVWRHTPWLGTHAAKGPQRPLRRLIQGLDPKTTASLFA 250

Query:   242 NSVLCVMEKTINNEDCFILKVEAEASALRARSTSNV--EIIRHTVWGYFSQRTGLLVQLK 299
              +  C+ E+ I ++DCF+LKV A+  +L  R+ +    E+IRH ++GYF Q++GLLV L+
Sbjct:   251 KAQ-CLGERRIGDDDCFVLKVSADRDSLLERNDAGAPAEVIRHALYGYFCQKSGLLVYLE 309

Query:   300 DSHLLRIKTPG-NNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTR 358
             DSHL R+ T    + +++WETT+ + I DYR +DG+ VAH GR   ++FRFGE S  ++R
Sbjct:   310 DSHLTRVMTISPEDEAVYWETTIGTSIGDYRDVDGVAVAHCGRAVATVFRFGETSLQYSR 369

Query:   359 TKMEEIWTIEEVDFNIEGLSMDCFLPPGDL 388
             T+MEEIW I++V F++ GLS+D F+PP D+
Sbjct:   370 TRMEEIWRIDDVVFDVPGLSLDSFIPPADI 399

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2144128 AT5G06610 "AT5G06610" [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
 Identities = 122/291 (41%), Positives = 182/291 (62%)

Query:   107 ASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKX 166
             +S A+YI++Q+ A+ G +K    I + +  GK+ M           +N        +   
Sbjct:    78 SSSAQYIIQQFAAATGCKKLAGEIKNTFVTGKITMTMVS------DINSSTA----VSSA 127

Query:   167 XXXXXXXXFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRR 226
                     FV+WQ  P+ W +ELV  G K+SAGSDG++ WR TPW   HA++G  RPLRR
Sbjct:   128 SSVSHKGCFVMWQMLPEKWLIELVGGGHKVSAGSDGEITWRYTPWLGDHAAKGAIRPLRR 187

Query:   227 FLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWG 286
              LQGLDP + +++FS++   V EK IN +DCFILK+  +   L  RS S  E+I+H  +G
Sbjct:   188 ALQGLDPLTISSVFSSAQF-VGEKEINGKDCFILKLSTDQIDLSKRSDSTAEMIKHVAFG 246

Query:   287 YFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDG--INVAHTGRTSV 344
             YFSQ++GLL+ L+DS L RI+ PG   + +WET+M S ++DYR I+G  + +AH+G+T V
Sbjct:   247 YFSQKSGLLICLEDSSLTRIQIPGTVPT-YWETSMSSWMEDYRAIEGSEVVIAHSGKTDV 305

Query:   345 SLFRFGENSESHTR-TKMEEIWTIEEVDFNIEGLSMDCFLPPGDLRKEEDH 394
              + RFGE  +     T+MEE WTI++V F++ GLS+DCF+PP +++ +  H
Sbjct:   306 LISRFGETLKGGISVTRMEEKWTIDDVAFDVPGLSVDCFIPPKEMKMDFHH 356

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	443
pfam04788	243	pfam04788, DUF620, Protein of unknown function (DU	1e-143

>gnl|CDD|191093 pfam04788, DUF620, Protein of unknown function (DUF620)

 Score =  409 bits (1052), Expect = e-143
 Identities = 151/253 (59%), Positives = 197/253 (77%), Gaps = 10/253 (3%)

Query: 133 MYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVS 192
           MYAMGKVKM ASEF  G G    R           G GE GGFVLWQ +PD+W +ELVV 
Sbjct: 1   MYAMGKVKMIASEFEIGNGKSVRRNSG--------GSGESGGFVLWQMKPDMWYVELVVG 52

Query: 193 GRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTI 252
           G K+SAGSDGK+ WR TPW  +HA++GP RPLRR LQGLDP++TA+LF+N+  CV EK +
Sbjct: 53  GSKVSAGSDGKVVWRHTPWLGAHAAKGPVRPLRRALQGLDPKTTASLFANAQ-CVGEKRV 111

Query: 253 NNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNN 312
           + EDCF+LK++A+ +AL ARS    E+IRHT++GYFSQR+GLLV+L+DSHL RI+TPG  
Sbjct: 112 DGEDCFVLKLDADPAALSARSDGPAEVIRHTLFGYFSQRSGLLVRLEDSHLTRIQTPG-A 170

Query: 313 NSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDF 372
           ++++WETT+ES + DYR +DG+ +AH+GR+ V+LFRFGE+S SH+RT+MEE WTI++V F
Sbjct: 171 DAVYWETTIESSLGDYRAVDGVMIAHSGRSVVTLFRFGEDSGSHSRTRMEEAWTIDDVAF 230

Query: 373 NIEGLSMDCFLPP 385
           N+ GLS D F+PP
Sbjct: 231 NVPGLSPDSFIPP 243

Family of uncharacterized proteins. Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	443
PF04788	245	DUF620: Protein of unknown function (DUF620); Inte	100.0
PF09865	214	DUF2092: Predicted periplasmic protein (DUF2092);	88.21

>PF04788 DUF620: Protein of unknown function (DUF620); InterPro: IPR006873 This is a family of uncharacterised proteins

Probab=100.00  E-value=9.2e-134  Score=950.09  Aligned_cols=244  Identities=73%  Similarity=1.254  Sum_probs=235.7

Q ss_pred             EEEeeeEEEEEEeeccCCCcccchheeccccccCCCccccccEEEEEecCCeEEEEEEeeCcEEEEccCCceeeeecCCC
Q 013416          133 MYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWH  212 (443)
Q Consensus       133 myA~GkVrM~~~e~~~g~~~~~~~~~~~~~~~~g~~~~e~GgFVlWQ~~Pd~W~~ELvV~G~KV~AGsDGkvaWRhtPw~  212 (443)
                      |||||||||.++||++|+..++.        ..+++.+|+||||||||+|||||+||||+|+||+||||||||||||||+
T Consensus         1 mya~GkVrM~~se~~~~~~~~~~--------~~~~~~~e~GgFVlWQ~~Pd~W~~ELvVgG~KV~AGsdGkvaWR~Tpw~   72 (245)
T PF04788_consen    1 MYAMGKVRMAASEFEGGSGSVTK--------VGPTGGGEKGGFVLWQMNPDMWYLELVVGGCKVSAGSDGKVAWRHTPWQ   72 (245)
T ss_pred             CceeeeEEEEEEeeccCCccccc--------cccCcccccccEEEEEeCCCeEEEEEEecceEEeeccCCeeeeecCccc
Confidence            89999999999999988766541        1237789999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCCchhhhhhccCCCcchhhcccccceeeeeeeeCCccceeEEeecchhhHhhhcCCCeeEEEeeeeecccccc
Q 013416          213 HSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRT  292 (443)
Q Consensus       213 ~sHAakGppRPLRR~lQGLDPr~tA~lF~~A~~cvGEk~I~geDCFiLKL~ad~~~l~ars~~~~EiIrH~~~GYFSQrT  292 (443)
                      ++||+|||||||||+||||||++||+||++|+ |||||+|||||||||||+||+++|++||++++|||||++||||||||
T Consensus        73 g~HAakGp~RPLRR~lQGLDPr~ta~lF~~A~-cvGEk~i~gedCFvLkl~ad~~~l~ars~~~~EiirH~~~GYFSQrt  151 (245)
T PF04788_consen   73 GSHAAKGPPRPLRRFLQGLDPRSTANLFSNAV-CVGEKRINGEDCFVLKLEADPSALKARSSGNAEIIRHTLWGYFSQRT  151 (245)
T ss_pred             cchhhcCCCchHHHHHhhcChhhHHHhhhhce-EeeeeccCCcccEEEEeeCCHHHHhhhcCCCcEEEEEeeeccccccc
Confidence            99999999999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             ceeEEeeceeeeeeecC-CCCCceEEeeccccccccceeccceeeecCCcceEEEEeecCCcccccccceeeeeeeeeee
Q 013416          293 GLLVQLKDSHLLRIKTP-GNNNSIFWETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVD  371 (443)
Q Consensus       293 GLLv~lEDs~L~riq~~-~~g~~vyWETtieS~i~DYR~VdGi~IAH~G~t~vtl~RfGe~~~~h~~TrmEE~WtIeev~  371 (443)
                      |||||||||||||||+. +++++|||||||||+|+|||+||||||||+|+|+||||||||++++|+||||||+|+|||||
T Consensus       152 GLLv~lEDS~L~ri~~~~~~~~~vyWETt~es~i~DYR~Vdgv~IAH~G~t~vtl~RfGe~~~~h~rTrmEE~W~Ieev~  231 (245)
T PF04788_consen  152 GLLVQLEDSHLTRIQSGRPGGDAVYWETTMESSIEDYRAVDGVNIAHSGRTVVTLFRFGENSMSHSRTRMEETWTIEEVD  231 (245)
T ss_pred             ceeeeeecceeEEeeecCCCCCceEEEEeecccccccccccceeeeccCCceEEEEecccccccCceeeEeeeeEeeeEE
Confidence            99999999999999993 57899999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCccccCCC
Q 013416          372 FNIEGLSMDCFLPP  385 (443)
Q Consensus       372 FNV~GLS~DcFiPP  385 (443)
                      ||||||||||||||
T Consensus       232 FNV~GLS~DcFiPP  245 (245)
T PF04788_consen  232 FNVPGLSMDCFIPP  245 (245)
T ss_pred             eccCCcchhcccCC
Confidence            99999999999999

>PF09865 DUF2092: Predicted periplasmic protein (DUF2092); InterPro: IPR019207 This entry represents various hypothetical prokaryotic proteins of unknown function

Probab=88.21  E-value=2.2  Score=41.19  Aligned_cols=91  Identities=16%  Similarity=0.154  Sum_probs=66.4

Q ss_pred             EEEecCCeEEEEEEeeCcEEEEccCCceeeeecCCCcCccCCCCCch----hhhhhccCCCcch-hhccc----------
Q 013416          177 LWQKRPDLWCLELVVSGRKISAGSDGKLAWRQTPWHHSHASRGPPRP----LRRFLQGLDPRST-ANLFS----------  241 (443)
Q Consensus       177 lWQ~~Pd~W~~ELvV~G~KV~AGsDGkvaWRhtPw~~sHAakGppRP----LRR~lQGLDPr~t-A~lF~----------  241 (443)
                      +|-.+||..++++.=++.....=+|||...-..|-...=|..--|-.    |.+..+-+.-..+ |.||.          
T Consensus        45 v~v~RPdklr~~~~gd~~~~~~~yDGkt~Tl~~~~~n~Ya~~~aP~tid~~i~~l~~~~gi~~P~aDll~~d~~~~l~~~  124 (214)
T PF09865_consen   45 VTVQRPDKLRIDRRGDGADREFYYDGKTFTLYDPNQNVYAQADAPGTIDAAIDYLRDKYGIELPLADLLYSDPYDALMDG  124 (214)
T ss_pred             EEEeCCCeEEEEEEcCCcceEEEECCCEEEEEcCcCCeEEeccCCCCHHHHHHHHHHhhCCCccHHHhcccCchHHHhhc
Confidence            68999999999998888999999999999999997766655544433    3333332222222 33332          


Q ss_pred             --ccceeeeeeeeCCccceeEEeecchhh
Q 013416          242 --NSVLCVMEKTINNEDCFILKVEAEASA  268 (443)
Q Consensus       242 --~A~~cvGEk~I~geDCFiLKL~ad~~~  268 (443)
                        .+. +||...|+|..|.+|-...+.-.
T Consensus       125 v~~~~-~vG~~~V~G~~c~HlAfr~~~~D  152 (214)
T PF09865_consen  125 VTSAK-YVGQSVVGGVECDHLAFRNDDVD  152 (214)
T ss_pred             ceEEE-EeeeEEECCEEeEEEEEecCCce
Confidence              456 99999999999999998866554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	443
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 3e-06
 Identities = 71/425 (16%), Positives = 126/425 (29%), Gaps = 130/425 (30%)

Query: 91  HHDHHHPIVDKDHPIEASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVK--MAASEFCA 148
           HH HHH  +D     E    +Y  K  + SV  +  +++ D        K  ++  E   
Sbjct: 1   HHHHHH--MD----FETGEHQYQYKD-ILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-- 51

Query: 149 GEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCLEL----VVSGRKISAGSDGKL 204
                 D ++  +    G          L       W L      +V  + +        
Sbjct: 52  ------DHIIMSKDAVSGT-------LRL------FWTLLSKQEEMVQ-KFVEEVLRINY 91

Query: 205 AWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFSNSVLCVMEKTINNEDCFILKVEA 264
            +  +P       R P    R +++  D      L+ N      +  ++    ++   + 
Sbjct: 92  KFLMSPIKTE--QRQPSMMTRMYIEQRDR-----LY-NDNQVFAKYNVSRLQPYL---KL 140

Query: 265 EASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFW------- 317
             + L  R   NV I    V G  S +T + + +  S+ ++ K       IFW       
Sbjct: 141 RQALLELRPAKNVLI--DGVLG--SGKTWVALDVCLSYKVQCKMDFK---IFWLNLKNCN 193

Query: 318 --ETTMESLIQDYRFIDGINVAHTGRTSVSLFRFGENSESHTRTKMEE------------ 363
             ET +E L +    ID  N       S ++     + ++  R  ++             
Sbjct: 194 SPETVLEMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 364 IWTIEEVD-FNI-------------------------------EGL----SMDCFL---- 383
           +   +  + FN+                                 L         L    
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 384 -PPGDLRKEEDHGCDVITSNPKLPFKIRAASFRVSAS-----KVVAIDA--EYSDDSTEY 435
             P DL +E      V+T+NP     I A S R   +     K V  D      + S   
Sbjct: 313 CRPQDLPRE------VLTTNP-RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 436 VDDDE 440
           ++  E
Sbjct: 366 LEPAE 370

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	443
3buu_A	229	Uncharacterized LOLA superfamily protein NE2245; P	98.26
3bk5_A	237	Putative outer membrane lipoprotein-sorting prote;	98.15
2yzy_A	200	Putative uncharacterized protein TTHA1012; unchara	90.7

>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}

Probab=98.26  E-value=3.4e-05  Score=68.72  Aligned_cols=207  Identities=13%  Similarity=0.137  Sum_probs=117.0

Q ss_pred             hhHHHHHhhhhhhcCChhhhccccEEEEeeeEEEEEEeeccCCCcccchheeccccccCCCccccccEEEEEecCCeEEE
Q 013416          108 SMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRPDLWCL  187 (443)
Q Consensus       108 SsA~YIvqQY~AAtGG~k~l~svksmyA~GkVrM~~~e~~~g~~~~~~~~~~~~~~~~g~~~~e~GgFVlWQ~~Pd~W~~  187 (443)
                      -+|+-||++.-++.+|.      ++..++.+  |.... . ++ ..                 ..--+.+|.+.++..++
T Consensus         7 ~~a~eil~~~~~~~~~~------~~~~~~~~--~~~~~-~-~~-~~-----------------~~~~~~~~~~~~~~~~~   58 (229)
T 3buu_A            7 VTAQSILEKADEIRFPQ------DSFQVNVA--IRTAA-P-DH-AE-----------------DLYRYQVLSKGNENSIV   58 (229)
T ss_dssp             CCHHHHHHHHHHHHSCS------SCEEEEEE--EEEEE-T-TE-EC-----------------CCEEEEEEEETTTEEEE
T ss_pred             CCHHHHHHHHHhhccCC------CCeEEEEE--EEEEc-C-CC-ce-----------------EEEEEEEEecCCceEEE
Confidence            46899999999988764      33334333  32221 1 10 00                 11124558888887776


Q ss_pred             EEE----eeCcEEEEccCCceeeeecCCCcCccCCCCCchhhhhhccCCCcchhhc----cc---ccceeeeeeeeCCcc
Q 013416          188 ELV----VSGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANL----FS---NSVLCVMEKTINNED  256 (443)
Q Consensus       188 ELv----V~G~KV~AGsDGkvaWRhtPw~~sHAakGppRPLRR~lQGLDPr~tA~l----F~---~A~~cvGEk~I~geD  256 (443)
                      .+.    +.|..++.  +|+-+|--.|-+.. .-+-++.  -+++ |  .++...+    |+   +.. ++|+++|+|.+
T Consensus        59 ~~~~P~~~~g~~~l~--~~~~~w~y~P~~~~-v~r~~~~--~~~~-g--~~~~~d~~~~~~~~~y~~~-l~g~~~v~g~~  129 (229)
T 3buu_A           59 MITEPASERGQAILM--KGRDLWVFMPSVSQ-PIRLSLS--QRLT-G--QVANGDIARANFTGDYHPQ-LLRNESIDDED  129 (229)
T ss_dssp             EEEESTTTTTCEEEE--ETTEEEEECTTCSS-CEEECTT--SEEE-T--TEEHHHHHCCCSBTTEEEE-EEEEEEETTEE
T ss_pred             EEeCChhhcCeEEee--cCCceEEECCCCCc-eEEccCc--cccc-c--cccccccccCCccccCceE-EeeeeeeCCee
Confidence            665    56777774  99999999997622 1011111  0111 2  1111111    11   224 89999999999


Q ss_pred             ceeEEeecchhhHhhhcCCCeeEEEeeeeeccccccceeEEeeceeeeeeecCCCCCceEEeeccccccccceeccceee
Q 013416          257 CFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDYRFIDGINV  336 (443)
Q Consensus       257 CFiLKL~ad~~~l~ars~~~~EiIrH~~~GYFSQrTGLLv~lEDs~L~riq~~~~g~~vyWETtieS~i~DYR~VdGi~I  336 (443)
                      |++|++...+..   +.     .=+  ..=|+++.|+|+++.+-         -+...--|++-.   +.+|+.++|+.+
T Consensus       130 ~~vl~~~pk~~~---~~-----y~k--~~lwiD~~t~~p~k~~~---------~d~~G~l~k~~~---~~~~~~~~g~~~  187 (229)
T 3buu_A          130 YYVLELTGIDRS---VT-----YQK--VLLWVNQSNFRPYKAEF---------YSVSGRLLKTSR---YENFDNILGEMR  187 (229)
T ss_dssp             EEEEEEEESSTT---SS-----CSE--EEEEEETTTCCEEEEEE---------ECTTSCEEEEEE---EEEEEEETTEEE
T ss_pred             EEEEEEEecCCC---Cc-----eEE--EEEEEECCCCcEEEEEE---------EcCCCCEEEEEE---eeccEEECCEEE
Confidence            999999887664   10     001  12378999999998732         111223455332   567888887665


Q ss_pred             ecCCcceEEEEeecCCcccccccceeeeeeeeeeeeccCCCCccccCCCc
Q 013416          337 AHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLPPG  386 (443)
Q Consensus       337 AH~G~t~vtl~RfGe~~~~h~~TrmEE~WtIeev~FNV~GLS~DcFiPP~  386 (443)
                      ++       -..+-+...+-..|.|+    +.++.||  +|+-+.|-|..
T Consensus       188 ~~-------~~~~~d~~~~g~~t~~~----~~~~~~~--~l~~~~Ft~~~  224 (229)
T 3buu_A          188 PT-------RIIMEDALKSGEVSVLD----YSDMKLR--DLPDKIFTKDY  224 (229)
T ss_dssp             EE-------EEEEEESSSSCCEEEEE----EEEEEEC--CCCGGGSSTGG
T ss_pred             eE-------EEEEEeCcCCCCEEEEE----EeeeEeC--CCChHhCCHHH
Confidence            53       22222212222345554    6688998  88888886543

>3bk5_A Putative outer membrane lipoprotein-sorting prote; putative outer membrane protein domain, PSI-2, protein struc initiative; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.15  E-value=9.3e-05  Score=66.59  Aligned_cols=211  Identities=14%  Similarity=0.117  Sum_probs=117.6

Q ss_pred             hhhHHHHHhhhhhhcCChhhhccccEEEEeeeEEEEEEeeccCCCcccchheeccccccCCCccccccEEEEEecC----
Q 013416          107 ASMAKYIVKQYVASVGGEKALNSIDSMYAMGKVKMAASEFCAGEGSLNDRLVKVRHLKKGVGGGEMGGFVLWQKRP----  182 (443)
Q Consensus       107 ~SsA~YIvqQY~AAtGG~k~l~svksmyA~GkVrM~~~e~~~g~~~~~~~~~~~~~~~~g~~~~e~GgFVlWQ~~P----  182 (443)
                      +-+|+.||++..++..|.      ++..+.++  |....- .|                   .....-|.+|.+.|    
T Consensus         3 a~~~~eil~~~~~~~~~~------~~~~~~~~--~~~~~~-~g-------------------~~~~~~~~~~~~~~~~~~   54 (237)
T 3bk5_A            3 AEKGLEIAQERKARDEGW------GDSIATME--MILKNA-QG-------------------ESSTRLMRLKSLEVEGDG   54 (237)
T ss_dssp             HHHHHHHHHHHHHTTCCC------CEEEEEEE--EEEECC-C--------------------CCEEEEEEEEEECCTTSC
T ss_pred             CCCHHHHHHHhHhhhccc------CCeEEEEE--EEEECC-CC-------------------CEEEEEEEeecccCCCCC
Confidence            457889999999987662      33344333  332111 11                   11123466677776    


Q ss_pred             CeEEEEEE----eeCcEEEE---ccCCceeeeecCCCcCccCCCCCchhhhhhccCCCcchh-------hcccccceeee
Q 013416          183 DLWCLELV----VSGRKISA---GSDGKLAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTA-------NLFSNSVLCVM  248 (443)
Q Consensus       183 d~W~~ELv----V~G~KV~A---GsDGkvaWRhtPw~~sHAakGppRPLRR~lQGLDPr~tA-------~lF~~A~~cvG  248 (443)
                      +..++++.    +.|..+..   -.+|+-+|-..|-+.. .-|-++.-....+-|.| ++..       .-| +.. ++|
T Consensus        55 ~~~~~~~~~P~~~~G~~~L~~~~~~~~~~~w~y~P~~~r-v~ri~~~~~~~~~~~s~-~~~~d~~~~~~~~y-~~~-l~g  130 (237)
T 3bk5_A           55 DKGLTIFDQPRDVTGTAFLNHSHTIGADDQWLYLPALKR-VKRISSRNKSGPFMGSE-FAYEDLSSFEIEKY-RFN-HLK  130 (237)
T ss_dssp             CEEEEEEEESTTTTTCEEEEECCSSSCCEEEEEETTTTE-EEECCGGGTTSBSTTSS-CBGGGGSCCCGGGE-EEE-EEE
T ss_pred             cEEEEEEECchHhCCcEEEEEEcCCCCccceeEccccCc-eEEcCccccCCCccccc-cChhHhhccccccc-ceE-Eee
Confidence            56666666    67888774   1299999999996621 11111100001111222 1110       111 234 899


Q ss_pred             eeeeCCccceeEEeecchhhHhhhcCCCeeEEEeeeeeccccccceeEEeeceeeeeeecCCCCCceEEeeccccccccc
Q 013416          249 EKTINNEDCFILKVEAEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQLKDSHLLRIKTPGNNNSIFWETTMESLIQDY  328 (443)
Q Consensus       249 Ek~I~geDCFiLKL~ad~~~l~ars~~~~EiIrH~~~GYFSQrTGLLv~lEDs~L~riq~~~~g~~vyWETtieS~i~DY  328 (443)
                      +++++|.+|++|++...+..   |     ..-+..  =|+++.|+++++++-  +    . .+|  --|++-   .+.+|
T Consensus       131 ~~~~~g~~~~vl~~~pk~~~---~-----~y~k~~--~wiD~~t~~~~k~~~--~----d-~~G--~l~~~~---~~~~~  188 (237)
T 3bk5_A          131 DEKFNGQDVFVLEQIPTDKN---S-----GYTKQV--VWLDKAHYRPLKVEF--Y----D-RKG--ALLKTL---TFANY  188 (237)
T ss_dssp             EEEETTEEEEEEEEEESCTT---S-----SEEEEE--EEEETTTCCEEEEEE--E----E-TTS--CEEEEE---EEEEE
T ss_pred             eeEECCeeEEEEEEEECCCC---C-----CceEEE--EEEECCCCeEEEEEE--E----c-CCC--CEEEEE---EEeee
Confidence            99999999999999887664   1     111122  378999999998742  1    1 122  134433   25578


Q ss_pred             eeccc-eeeecCCcceEEEEeecCCcccccccceeeeeeeeeeeeccCCCCccccCC
Q 013416          329 RFIDG-INVAHTGRTSVSLFRFGENSESHTRTKMEEIWTIEEVDFNIEGLSMDCFLP  384 (443)
Q Consensus       329 R~VdG-i~IAH~G~t~vtl~RfGe~~~~h~~TrmEE~WtIeev~FNV~GLS~DcFiP  384 (443)
                      +.++| +.+++       ...+-+ ...-..|.|+    +.++.||. +|.-+.|=|
T Consensus       189 ~~~~g~~~~~~-------~~~~~d-l~~g~~t~~~----~~~~~~~~-~~~~~~Ft~  232 (237)
T 3bk5_A          189 KQYLDKYWRAH-------TMAMTN-HQTGKSTELN----TSDLRFQT-GLEENDFNK  232 (237)
T ss_dssp             EEETTTEEEEE-------EEEEEE-TTTCCEEEEE----EEEEEECC-CCCGGGGCG
T ss_pred             EEEcceEEEEE-------EEEEEE-CCCCCEEEEE----EeeEEeCC-CCChHhCCH
Confidence            88888 65553       222222 1222345555    55899998 677666644

>2yzy_A Putative uncharacterized protein TTHA1012; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.60A {Thermus thermophilus}

Probab=90.70  E-value=1.3  Score=39.75  Aligned_cols=89  Identities=12%  Similarity=0.048  Sum_probs=46.5

Q ss_pred             eCcEEEEccCCceeeeecCCCcCccCCCCCchhhhhhc-cCCCcchhhcc-----c--ccceeeeeeeeCCccceeEEee
Q 013416          192 SGRKISAGSDGKLAWRQTPWHHSHASRGPPRPLRRFLQ-GLDPRSTANLF-----S--NSVLCVMEKTINNEDCFILKVE  263 (443)
Q Consensus       192 ~G~KV~AGsDGkvaWRhtPw~~sHAakGppRPLRR~lQ-GLDPr~tA~lF-----~--~A~~cvGEk~I~geDCFiLKL~  263 (443)
                      .|+.++  +||+-.|...|-.. .+   ..+|+-+.++ ++- ..-+.|.     .  -.+..+||+.++|.+|++|.+.
T Consensus        64 ~g~~~l--~~g~~~W~y~p~~~-qv---~i~~~~~~~~~~mg-~~~~~l~~~~~l~~~y~~~~~~~e~~~g~~~~~le~~  136 (200)
T 2yzy_A           64 EGNFTV--ITEKEVWNYLYLTN-QL---VISPREKAKIQGLG-FAPQGLGDLKALSEQVDLRLEGEVRLPEGMAWKLVGR  136 (200)
T ss_dssp             TTCEEE--ECSSCEEEEETTTT-EE---EEEC-------------------------CCEEEEEEEEEETTEEEEEEEEE
T ss_pred             cCeEEE--ecCchheeecCCcC-eE---EEeCcccccCcccC-cCHHHhhccccccccceEEEEEEEEeCCccEEEEEEE
Confidence            466665  59999999988651 11   2344433322 110 0011122     1  1123789999999999999988


Q ss_pred             cchhhHhhhcCCCeeEEEeeeeeccccccceeEEe
Q 013416          264 AEASALRARSTSNVEIIRHTVWGYFSQRTGLLVQL  298 (443)
Q Consensus       264 ad~~~l~ars~~~~EiIrH~~~GYFSQrTGLLv~l  298 (443)
                      .....       ..    +-+-=|+++.+++++++
T Consensus       137 Pk~~~-------~y----~k~~~wvdk~~~~~~k~  160 (200)
T 2yzy_A          137 SKENQ-------GF----AAMELYILKADPRPLRF  160 (200)
T ss_dssp             C---C-------CC----SEEEEEEETTTTEEEEE
T ss_pred             ECCCC-------ce----EEEEEEEECCCCeEEEE
Confidence            75432       11    12334678888888864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00