Citrus Sinensis ID: 013518

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-
MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKPSCPVVG
cccccccccEEEEccccEEEccccccccccccccccccccccccccccccccEEccccEEEEEEEEcccccccccEEcccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHcccccEEEcccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHcccccccccEEEEccccccccHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEcHHHHHHcccccccccHHHHHHHHHcccccccccHHHHHHHcccccccccc
cccccccccEEEEcccccEHHHHHHHHHHccccccccccccccccEEEccHHEccccHHHHHHHHHccccccccEHccccccEEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEcccccccccccEEEccHccHHHHHccccEEEccccccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccccEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHccccccccEEEEHccHHHHHHHHHHHHHHccccEEEEEEcccHEEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEHHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHccccccccc
mghsgnlqlkvvngdagyvledvphltdyipdlptypnplqfnAAYSVVKQYFVnvddtvsqkivvhkdsprgthfrragprqkvyfvSDEVHACIVTcgglcpglnTVIREIVCGLYHMYGVSKIlgidggyrgfyskntinltpkVVNDIHkrggtilgtsrgghdtskIVDSIqdrginqvyiiggdgtqkGAAVIYEEIRQRGLKVAvagipktidndipvidksfgFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATlgsrdvdcclipespfylegeeSLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINlkyidptymiraipsnasdnVYCTLLAQSAVHGavagytgftvgpvngrhayipfnrinerqNQVVITDRMWARVlsstnqpsflsANELAkfkrekpscpvvg
MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKivvhkdsprgthfrragprQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGgtilgtsrgghdtSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAvagipktidndipviDKSFGFDTAVEEAQRAINAahveaesiengiGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSStnqpsflsanelakfkrekpscpvvg
MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKPSCPVVG
*******QLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYL*****************KLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLS***************************
************NGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGE****************LQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQP**********************
MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKF***********
*******QLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKPSC****
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MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAxxxxxxxxxxxxxxxxxxxxxIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKPSCPVVG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query441 2.2.26 [Sep-21-2011]
Q94AA4489 6-phosphofructokinase 3 O yes no 0.961 0.867 0.770 0.0
Q9M076462 6-phosphofructokinase 6 O no no 0.943 0.900 0.779 0.0
Q9C5J7485 6-phosphofructokinase 7 O no no 0.975 0.886 0.752 0.0
Q9M0F9473 6-phosphofructokinase 1 O no no 0.941 0.877 0.755 0.0
Q9FKG3530 6-phosphofructokinase 4, no no 0.927 0.771 0.715 0.0
Q9FIK0444 6-phosphofructokinase 2 O no no 0.866 0.860 0.514 1e-117
Q8VYN6537 6-phosphofructokinase 5, no no 0.902 0.741 0.465 1e-105
P65690343 6-phosphofructokinase OS= yes no 0.430 0.553 0.409 3e-29
P65691343 6-phosphofructokinase OS= yes no 0.430 0.553 0.409 3e-29
Q59126341 Pyrophosphate--fructose 6 N/A no 0.605 0.782 0.321 6e-27
>sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 Back     alignment and function desciption
 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/457 (77%), Positives = 384/457 (84%), Gaps = 33/457 (7%)

Query: 10  KVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKD 69
           K++NG  GYVLEDVPHL+DY+P LPTYPNPLQ N AYSVVKQYFV+ DD+V QKIVVHKD
Sbjct: 10  KIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSVPQKIVVHKD 69

Query: 70  SPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGI 129
            PRG HFRRAGPRQKVYF SDEVHACIVTCGGLCPGLNTVIREIV  L +MYGV +ILGI
Sbjct: 70  GPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGI 129

Query: 130 DGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGG 189
           DGGYRGFY+KNT++L  KVVNDIHKRGGTILGTSRGGHDT+KIVDSIQDRGINQVYIIGG
Sbjct: 130 DGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRGINQVYIIGG 189

Query: 190 DGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE 249
           DGTQ+GA+VI+EEIR+RGLKVAV GIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE
Sbjct: 190 DGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE 249

Query: 250 AESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGE------------- 296
           AESIENGIGVVKLMGRY GFIAMYATL SRDVDCCLIPESPFYLEGE             
Sbjct: 250 AESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGLFEYIEKRLKE 309

Query: 297 ------------------ESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINL 338
                             +S++SM  +DASGNKLL+DVGLW+S  IKDHF +  KM +NL
Sbjct: 310 SGHMVLVIAEGAGQDLMSKSMESMTLKDASGNKLLKDVGLWLSQSIKDHFNQ-KKMVMNL 368

Query: 339 KYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINER 398
           KYIDPTYMIRA+PSNASDNVYCTLLAQSAVHGA+AGYTG+  G VNGR  YIPF RI E+
Sbjct: 369 KYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYISGLVNGRQTYIPFYRITEK 428

Query: 399 QNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKP 435
           QN VVITDRMWAR+LSSTNQPSFL   ++    +EKP
Sbjct: 429 QNHVVITDRMWARLLSSTNQPSFLGPKDVFD-NKEKP 464

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1
>sp|Q9M076|K6PF6_ARATH 6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0F9|K6PF1_ARATH 6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FKG3|K6PF4_ARATH 6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1 Back     alignment and function description
>sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYN6|K6PF5_ARATH 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1 Back     alignment and function description
>sp|P65690|K6PF_MYCTU 6-phosphofructokinase OS=Mycobacterium tuberculosis GN=pfkA PE=3 SV=1 Back     alignment and function description
>sp|P65691|K6PF_MYCBO 6-phosphofructokinase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pfkA PE=3 SV=1 Back     alignment and function description
>sp|Q59126|PFP_AMYME Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis methanolica GN=pfp PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query441
255550894485 phosphofructokinase, putative [Ricinus c 0.984 0.894 0.823 0.0
356515641507 PREDICTED: 6-phosphofructokinase 3-like 0.972 0.846 0.815 0.0
356507939509 PREDICTED: 6-phosphofructokinase 3-like 0.979 0.848 0.810 0.0
224092250480 predicted protein [Populus trichocarpa] 0.986 0.906 0.806 0.0
225445037539 PREDICTED: 6-phosphofructokinase 3-like 0.984 0.805 0.793 0.0
225429400488 PREDICTED: 6-phosphofructokinase 3 [Viti 0.972 0.879 0.801 0.0
147799033488 hypothetical protein VITISV_023326 [Viti 0.972 0.879 0.801 0.0
297738727491 unnamed protein product [Vitis vinifera] 0.984 0.883 0.793 0.0
255549790 543 phosphofructokinase, putative [Ricinus c 0.977 0.793 0.777 0.0
255546259 632 phosphofructokinase, putative [Ricinus c 0.961 0.670 0.800 0.0
>gi|255550894|ref|XP_002516495.1| phosphofructokinase, putative [Ricinus communis] gi|223544315|gb|EEF45836.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/469 (82%), Positives = 412/469 (87%), Gaps = 35/469 (7%)

Query: 1   MGHS-GNLQ---LKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNV 56
           MG++ GNLQ   +K+VNG+AGY+LEDVPHLTDYIPDLPTYPNPLQ N AYS VKQYFVNV
Sbjct: 1   MGNADGNLQSQMMKIVNGEAGYLLEDVPHLTDYIPDLPTYPNPLQDNPAYSAVKQYFVNV 60

Query: 57  DDTVSQKIVVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCG 116
           DDTV+QKIVVHKD PRGTHFRRAGPRQKVYF SDEVHACIVTCGGLCPGLNTVIREIVCG
Sbjct: 61  DDTVAQKIVVHKDGPRGTHFRRAGPRQKVYFKSDEVHACIVTCGGLCPGLNTVIREIVCG 120

Query: 117 LYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSI 176
           L+HMYGV+K+LGIDGGYRGFYSKNT+ LTPKVVNDIHKRGGTILGTSRGGHD SKIVDSI
Sbjct: 121 LHHMYGVTKVLGIDGGYRGFYSKNTVALTPKVVNDIHKRGGTILGTSRGGHDKSKIVDSI 180

Query: 177 QDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAV 236
           QDRGINQVYIIGGDGTQKGAAVIYEEI++RGLKVAVAGIPKTIDNDIPVIDKSFGFD+AV
Sbjct: 181 QDRGINQVYIIGGDGTQKGAAVIYEEIQRRGLKVAVAGIPKTIDNDIPVIDKSFGFDSAV 240

Query: 237 EEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGE 296
           EEAQRAINAAHVEAES ENGIGVVKLMGRY GFIAMYATL SRDVDCCLIPESPFYLEG+
Sbjct: 241 EEAQRAINAAHVEAESTENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGQ 300

Query: 297 -------------------------------ESLQSMNQQDASGNKLLQDVGLWISHKIK 325
                                          +SLQSMNQQDASGNKLLQDVGLWIS +IK
Sbjct: 301 GGLLEFIGKRLKENGHMVIVIAEGAGQDLVSKSLQSMNQQDASGNKLLQDVGLWISQRIK 360

Query: 326 DHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNG 385
           DHFAR H+M I LKYIDPTYMIRAIPSNASDNVYCTLLA SAVHGA+AGYTGFTVGPVNG
Sbjct: 361 DHFAREHRMNITLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAGYTGFTVGPVNG 420

Query: 386 RHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREK 434
           RHAYIPFNRI E+QN VVITDRMWAR+LSST+QPSF+S   L K K+++
Sbjct: 421 RHAYIPFNRITEKQNNVVITDRMWARLLSSTDQPSFMSPKVLTKVKKQE 469

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356515641|ref|XP_003526507.1| PREDICTED: 6-phosphofructokinase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356507939|ref|XP_003522720.1| PREDICTED: 6-phosphofructokinase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|224092250|ref|XP_002309528.1| predicted protein [Populus trichocarpa] gi|222855504|gb|EEE93051.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445037|ref|XP_002283274.1| PREDICTED: 6-phosphofructokinase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225429400|ref|XP_002275308.1| PREDICTED: 6-phosphofructokinase 3 [Vitis vinifera] gi|296081592|emb|CBI20597.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147799033|emb|CAN74837.1| hypothetical protein VITISV_023326 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738727|emb|CBI27972.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255549790|ref|XP_002515946.1| phosphofructokinase, putative [Ricinus communis] gi|223544851|gb|EEF46366.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255546259|ref|XP_002514189.1| phosphofructokinase, putative [Ricinus communis] gi|223546645|gb|EEF48143.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query441
TAIR|locus:2136849489 PFK3 "phosphofructokinase 3" [ 0.657 0.593 0.872 8.2e-190
TAIR|locus:2165046485 PFK7 "phosphofructokinase 7" [ 0.657 0.597 0.848 1.1e-187
TAIR|locus:2118249473 PFK1 "phosphofructokinase 1" [ 0.666 0.621 0.823 4.8e-183
TAIR|locus:2151571530 PFK4 "phosphofructokinase 4" [ 0.673 0.560 0.760 5.9e-174
TAIR|locus:2134108462 PFK6 "phosphofructokinase 6" [ 0.662 0.632 0.849 4.7e-135
TAIR|locus:2160897444 PFK2 "phosphofructokinase 2" [ 0.594 0.590 0.564 5.5e-111
TAIR|locus:2041208537 PFK5 "phosphofructokinase 5" [ 0.492 0.404 0.618 3.9e-102
TIGR_CMR|CHY_1349361 CHY_1349 "phosphofructokinase" 0.462 0.565 0.395 9.8e-32
UNIPROTKB|P65690343 pfkA "6-phosphofructokinase" [ 0.430 0.553 0.409 4.9e-30
TIGR_CMR|CHY_1143321 CHY_1143 "6-phosphofructokinas 0.428 0.588 0.380 1.6e-26
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1344 (478.2 bits), Expect = 8.2e-190, Sum P(2) = 8.2e-190
 Identities = 253/290 (87%), Positives = 269/290 (92%)

Query:    10 KVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKD 69
             K++NG  GYVLEDVPHL+DY+P LPTYPNPLQ N AYSVVKQYFV+ DD+V QKIVVHKD
Sbjct:    10 KIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSVPQKIVVHKD 69

Query:    70 SPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGI 129
              PRG HFRRAGPRQKVYF SDEVHACIVTCGGLCPGLNTVIREIV  L +MYGV +ILGI
Sbjct:    70 GPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGI 129

Query:   130 DGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGG 189
             DGGYRGFY+KNT++L  KVVNDIHKRGGTILGTSRGGHDT+KIVDSIQDRGINQVYIIGG
Sbjct:   130 DGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRGINQVYIIGG 189

Query:   190 DGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE 249
             DGTQ+GA+VI+EEIR+RGLKVAV GIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE
Sbjct:   190 DGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE 249

Query:   250 AESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESL 299
             AESIENGIGVVKLMGRY GFIAMYATL SRDVDCCLIPESPFYLEGE  L
Sbjct:   250 AESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGL 299
GO:0003872 "6-phosphofructokinase activity" evidence=IEA;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005945 "6-phosphofructokinase complex" evidence=IEA;ISS
GO:0006096 "glycolysis" evidence=ISS;IDA
GO:0005829 "cytosol" evidence=IDA
GO:0010053 "root epidermal cell differentiation" evidence=IMP
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151571 PFK4 "phosphofructokinase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134108 PFK6 "phosphofructokinase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041208 PFK5 "phosphofructokinase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1143 CHY_1143 "6-phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94AA4K6PF3_ARATH2, ., 7, ., 1, ., 1, 10.77020.96140.8670yesno
Q9C5J7K6PF7_ARATH2, ., 7, ., 1, ., 1, 10.75270.97500.8865nono
Q9M0F9K6PF1_ARATH2, ., 7, ., 1, ., 1, 10.75500.94100.8773nono
Q9M076K6PF6_ARATH2, ., 7, ., 1, ., 1, 10.77920.94330.9004nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.110.979
3rd Layer2.7.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_VI1611
6-phosphofructokinase (EC-2.7.1.11) (480 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VIII.2574.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)
     •• 0.932
gw1.II.3030.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)
     •• 0.914
gw1.XI.1644.1
hypothetical protein (551 aa)
  •  • •0.911
estExt_fgenesh4_pg.C_1660043
SubName- Full=Putative uncharacterized protein; (562 aa)
  •  • •0.911
fgenesh4_pg.C_LG_V001718
SubName- Full=Putative uncharacterized protein; (617 aa)
  •  • •0.910
eugene3.00020029
pyrophosphate--fructose-6-phosphate 1-phosphotransferase (617 aa)
  •  • •0.909
gw1.127.161.1
hypothetical protein (339 aa)
     •• 0.907
estExt_Genewise1_v1.C_LG_XIV0740
transketolase (EC-2.2.1.1) (635 aa)
     •• 0.903
eugene3.00021349
SubName- Full=Putative uncharacterized protein; (745 aa)
     •• 0.903
fgenesh4_pm.C_LG_X000906
transketolase (EC-2.2.1.1) (656 aa)
     •• 0.902

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
PLN02564484 PLN02564, PLN02564, 6-phosphofructokinase 0.0
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 1e-172
PTZ00286459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 1e-167
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 1e-148
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 1e-65
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 6e-45
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 2e-42
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 7e-42
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 3e-33
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 6e-32
pfam00365279 pfam00365, PFK, Phosphofructokinase 5e-30
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 3e-28
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 6e-21
TIGR02477 539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 8e-21
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 2e-19
cd00765 550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 1e-18
PRK07085 555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 6e-18
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 8e-17
PRK06555403 PRK06555, PRK06555, pyrophosphate--fructose-6-phos 3e-16
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 7e-16
cd00764762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 1e-15
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 4e-15
PRK14072416 PRK14072, PRK14072, 6-phosphofructokinase; Provisi 7e-14
PLN03028 610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 9e-13
PLN02251 568 PLN02251, PLN02251, pyrophosphate-dependent phosph 2e-12
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 0.001
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information 
 Score =  933 bits (2412), Expect = 0.0
 Identities = 376/463 (81%), Positives = 403/463 (87%), Gaps = 31/463 (6%)

Query: 5   GNLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKI 64
           G+ + K+V GDAGYVLEDVPHLTDY+PDLPTYPNPLQ N AYSVVKQYFVN DDTV+QKI
Sbjct: 1   GSSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKI 60

Query: 65  VVHKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVS 124
           VVHKDSPRGTHFRRAGPRQKVYF SDEV ACIVTCGGLCPGLNTVIREIVCGL +MYGV+
Sbjct: 61  VVHKDSPRGTHFRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVT 120

Query: 125 KILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 184
           +ILGIDGGYRGFYS+NTI LTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV
Sbjct: 121 RILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 180

Query: 185 YIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN 244
           YIIGGDGTQKGA+VIYEEIR+RGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN
Sbjct: 181 YIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN 240

Query: 245 AAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGE-------- 296
           AAHVEAES+ENGIG+VKLMGRY GFIAMYATL SRDVDCCLIPESPFYLEG+        
Sbjct: 241 AAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIE 300

Query: 297 -----------------------ESLQSMNQQDASGNKLLQDVGLWISHKIKDHFARLHK 333
                                  ES++S + QDASGNKLL DVGLW+S KIKDHF ++ K
Sbjct: 301 KRLKENGHMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKK 360

Query: 334 MAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFN 393
           M INLKYIDPTYMIRAIPSNASDNVYCTLLA SAVHGA+AGYTGFTVGPVNGRHAYIPF 
Sbjct: 361 MPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAGYTGFTVGPVNGRHAYIPFY 420

Query: 394 RINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKREKPS 436
           RI E+QN+VVITDRMWAR+LSSTNQPSFLS  ++ + KRE   
Sbjct: 421 RITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKREDEE 463

Length = 484
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 441
PLN02564484 6-phosphofructokinase 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PTZ00286459 6-phospho-1-fructokinase; Provisional 100.0
PLN02884411 6-phosphofructokinase 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
PRK14072416 6-phosphofructokinase; Provisional 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
TIGR02477539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
PRK07085555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
cd00765550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
PLN02251568 pyrophosphate-dependent phosphofructokinase 100.0
PLN03028610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 93.14
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 92.27
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 91.6
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.94
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.86
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.32
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.86
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.01
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.83
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.76
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 88.66
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 88.59
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 87.18
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 86.01
PLN02929301 NADH kinase 84.66
PF00532279 Peripla_BP_1: Periplasmic binding proteins and sug 84.62
TIGR01917431 gly_red_sel_B glycine reductase, selenoprotein B. 84.38
cd06321271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 84.16
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 83.56
TIGR01918431 various_sel_PB selenoprotein B, glycine/betaine/sa 83.33
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 83.04
PRK13054300 lipid kinase; Reviewed 82.62
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.55
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 81.52
PRK11914306 diacylglycerol kinase; Reviewed 81.0
PRK02231272 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 80.71
PRK13337304 putative lipid kinase; Reviewed 80.52
>PLN02564 6-phosphofructokinase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-110  Score=872.89  Aligned_cols=428  Identities=87%  Similarity=1.360  Sum_probs=400.4

Q ss_pred             CCCCceecCCCCcccccccchhhhCCCCCCCcCCCCCCcccccccccccccChhHHHHHHhccCCCCcccccccCCcccc
Q 013518            6 NLQLKVVNGDAGYVLEDVPHLTDYIPDLPTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDSPRGTHFRRAGPRQKV   85 (441)
Q Consensus         6 ~~~~~~~~~~~~~~~eav~~l~~~~p~~p~~~~~l~~n~~~~~~~~~~v~~t~~v~~~~~~~~~~~~~~~f~~~~~r~~~   85 (441)
                      ..+.|+++++..+.+|.||||.++.|+.|.+++||..|+.++.....||++++.|+..+...+...++..|+++|||+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~~~~agpr~~i   81 (484)
T PLN02564          2 SSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKIVVHKDSPRGTHFRRAGPRQKV   81 (484)
T ss_pred             CCcCccccCCCceeeccCcchhhcCCCcCCCCCccCCCcccccccceEeCCCCeEEEeecccccccCCccceecCCcceE
Confidence            45789999999999999999999999999999999999999988899999999999887765555678899999999999


Q ss_pred             cccCCCeeEEEEccCCCCcchhHHHHHHHHHHHHhcCCcEEEEEcccccccccCCeeeCChhhhhccccccccccccccC
Q 013518           86 YFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRG  165 (441)
Q Consensus        86 ~~~~~~~~iaIl~sGG~apGmNa~Ir~~v~~~~~~~~~~~v~Gi~~G~~GL~~~~~~~L~~~~v~~~~~~GGs~LGssR~  165 (441)
                      ||+|+++|||||||||||||||++||++|+.+.+.|++.+||||++||+||+++++++|+|+.|++|+++|||+|||||+
T Consensus        82 ~f~p~~~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~GGTiLGTsR~  161 (484)
T PLN02564         82 YFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRG  161 (484)
T ss_pred             EEcCcceEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCeEeCCHHHhhcHhhCCCceeccCCC
Confidence            99999999999999999999999999999988777787899999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhCCCEEEEEcCCCchHHHHHHHHHHHHcCCCceEEEeeccccCCCCCCCCCCChhhHHHHHHHHHHH
Q 013518          166 GHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINA  245 (441)
Q Consensus       166 ~~~~~~i~~~l~~~~Id~LvvIGGdgs~~~a~~L~~~~~~~~~~i~vvgIPkTIDNDi~~td~s~GfdTA~~~~~~~i~~  245 (441)
                      ++++++++++|++++||+||+|||||||++|++|+++++++|++|+||||||||||||++||+|||||||+++++++|++
T Consensus       162 ~~~~~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTAv~~~~~aI~~  241 (484)
T PLN02564        162 GHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINA  241 (484)
T ss_pred             cchHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCceEEEEEecCCCccHHHHHHhhccCCCCEEEcCCCCCChh---hH-HHHHh--------------------
Q 013518          246 AHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLE---GE-ESLQS--------------------  301 (441)
Q Consensus       246 i~~~a~s~~~rv~iVEvMGr~~G~LA~~~aLA~~~ad~iliPE~~~~l~---~~-e~l~~--------------------  301 (441)
                      ++++|.|+++||||||+|||+|||||++++||+++||+|||||.||+++   ++ +.+++                    
T Consensus       242 i~~tA~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~pf~le~~~~ll~~i~~rl~~~~~~VIVVAEGagq~~  321 (484)
T PLN02564        242 AHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVVAEGAGQDL  321 (484)
T ss_pred             HHHHHHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCCCCcchHHHHHHHHHHHHhccCCEEEEEeCCCccch
Confidence            9999999988999999999999999999999996699999999999999   34 11110                    


Q ss_pred             -------hhhhhccCCcchhhhHHHHHHHHHHHhccccceeeeeeeeCCCceeccCCCCcchHHHHHHHHHHHHHHHHcC
Q 013518          302 -------MNQQDASGNKLLQDVGLWISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAG  374 (441)
Q Consensus       302 -------~~~~d~~G~~~l~~i~~~l~~~I~~~~~~~~~~~~~~r~i~pgy~qRgg~p~a~Dr~~a~~lG~~AV~~~~~G  374 (441)
                             ..++|++||+++.+++.+|+++|+++++.+.++.+++|+++|||+|||++|+++||+||++||+.|||++++|
T Consensus       322 ~~~~~~~~~~~Da~Gn~~l~dig~~La~~I~~~~~~~~~~~~~~r~i~lgy~qRgg~p~a~Dri~a~~lG~~AV~~~~aG  401 (484)
T PLN02564        322 IAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKKMPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAG  401 (484)
T ss_pred             hhhhhcccccccccCCcccCcHHHHHHHHHHHHhhhcccCCceEEEecCCchhcCCCCcHHHHHHHHHHHHHHHHHHHcC
Confidence                   0236999999999999999999999985444556789999999999999999999999999999999999999


Q ss_pred             CCceEEEEECCeEEeechhhhhhcCCccCcCHHHHHHHHHhcCCCCCCChHHHHHhhhc
Q 013518          375 YTGFTVGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSFLSANELAKFKRE  433 (441)
Q Consensus       375 ~tg~mVg~~~~~~~~vPl~~v~~~~k~v~~~~~~~~~~l~~t~qp~~~~~~~~~~~~~~  433 (441)
                      +||+||+++|++++++||++++..+|+|++++.+|.++|++||||+|+.+++....+++
T Consensus       402 ~tg~mVg~~~~~~~~vPi~~~~~~~~~v~~~~~~w~~~l~~t~qp~f~~~~~~~~~~~~  460 (484)
T PLN02564        402 YTGFTVGPVNGRHAYIPFYRITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKRE  460 (484)
T ss_pred             CCCEEEEEECCEEEEEEHHHHhccCCccCCChHHHHHHHHHcCCCCccCchhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999998877665544

>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators Back     alignment and domain information
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
2hig_A487 Crystal Structure Of Phosphofructokinase Apoenzyme 2e-66
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 4e-21
3pfk_A319 Phosphofructokinase. Structure And Control Length = 1e-20
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 1e-20
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 2e-20
1pfk_A320 Crystal Structure Of The Complex Of Phosphofructoki 5e-20
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 7e-19
1kzh_A 555 Structure Of A Pyrophosphate-dependent Phosphofruct 2e-17
3opy_B 941 Crystal Structure Of Pichia Pastoris Phosphofructok 1e-12
3o8l_A 762 Structure Of Phosphofructokinase From Rabbit Skelet 2e-12
3o8o_A 787 Structure Of Phosphofructokinase From Saccharomyces 1e-10
3o8o_B 766 Structure Of Phosphofructokinase From Saccharomyces 2e-10
3opy_A989 Crystal Structure Of Pichia Pastoris Phosphofructok 2e-09
3k2q_A420 Crystal Structure Of Pyrophosphate-Dependent Phosph 3e-06
3hno_A419 Crystal Structure Of Pyrophosphate-Dependent Phosph 2e-04
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure 
Iteration: 1

 Score =  249 bits (637), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 214/371 (57%), Gaps = 37/371 (9%)
Query: 79  AGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYS 138
           A  R +++F   E    IVTCGG+CPGLN VIR I     ++Y V +++G   GY G   
Sbjct: 85  AAARSRIHFNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSK 144
Query: 139 KNT---INLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKG 195
           K +   I L    V +IH  GGTILG+SRG  D  ++VD+++  G+N ++ +GGDGTQ+G
Sbjct: 145 KGSQTAIELHRGRVTNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRG 204
Query: 196 AAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIEN 255
           A VI +E ++RG+ ++V G+PKTIDND+    ++FGF TAVE+A +AI AA+ EA S   
Sbjct: 205 ALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAAYAEAVSANY 264
Query: 256 GIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQ---------- 305
           G+GVVKLMGR  GFIA  A + S   + CL+PE+P     E+ + S+ ++          
Sbjct: 265 GVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPI---SEQEVMSLLERRFCHSRSCVI 321
Query: 306 -----------------DASGNKLLQDVGLWISHKIKDHFARLHKMAI---NLKYIDPTY 345
                            DASGNK L D+G+ ++ K+K  F + +K       +KYIDP+Y
Sbjct: 322 IVAEGFGQDWGRGSGGYDASGNKKLIDIGVILTEKVK-AFLKANKSRYPDSTVKYIDPSY 380
Query: 346 MIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQNQVVIT 405
           MIRA P +A+D ++C  LA  AVH A+AG TG  +   +  +  +P       +  + + 
Sbjct: 381 MIRACPPSANDALFCATLATLAVHEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLR 440
Query: 406 DRMWARVLSST 416
            ++W +V   T
Sbjct: 441 GQLWRQVREIT 451
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 Back     alignment and structure
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 Back     alignment and structure
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 Back     alignment and structure
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 Back     alignment and structure
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 Back     alignment and structure
>pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target Mqr88 Length = 420 Back     alignment and structure
>pdb|3HNO|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Nitrosospira Multiformis. Northeast Structural Genomics Consortium Target Id Nmr42 Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 0.0
2f48_A 555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 8e-87
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 1e-09
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 2e-51
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 6e-51
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 2e-50
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 1e-46
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 5e-38
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 5e-45
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 6e-39
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 5e-45
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 1e-38
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 1e-44
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 2e-40
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 2e-43
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 1e-42
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 1e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
 Score =  527 bits (1360), Expect = 0.0
 Identities = 155/454 (34%), Positives = 232/454 (51%), Gaps = 43/454 (9%)

Query: 1   MGHSGNLQLKVVNGDAGYVLEDVPHLTDYIPDLP--TYPNPLQFNAAYSVVKQYFVNVDD 58
           +     +  K+V      +L  V      +  LP   YPNP +  ++       F +  D
Sbjct: 3   VESRSRVTSKLVKAH-RAMLNSVTQEDLKVDRLPGADYPNPSKKYSSR----TEFRDKTD 57

Query: 59  TVSQKIVV-------HKDSPRGTHFRRAGPRQKVYFVSDEVHACIVTCGGLCPGLNTVIR 111
            +             +  S        A  R +++F   E    IVTCGG+CPGLN VIR
Sbjct: 58  YIMYNPRPRDEPSSENPVSVSPLLCELAAARSRIHFNPTETTIGIVTCGGICPGLNDVIR 117

Query: 112 EIVCGLYHMYGVSKILGIDGGYRGFY---SKNTINLTPKVVNDIHKRGGTILGTSRGGHD 168
            I     ++Y V +++G   GY G     S+  I L    V +IH  GGTILG+SRG  D
Sbjct: 118 SITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGPQD 177

Query: 169 TSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDK 228
             ++VD+++  G+N ++ +GGDGTQ+GA VI +E ++RG+ ++V G+PKTIDND+    +
Sbjct: 178 PKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHR 237

Query: 229 SFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPE 288
           +FGF TAVE+A +AI AA+ EA S   G+GVVKLMGR  GFIA  A + S   + CL+PE
Sbjct: 238 TFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPE 297

Query: 289 SPFYLE------------------------GEESLQSMNQQDASGNKLLQDVGLWISHKI 324
           +P   +                        G++  +     DASGNK L D+G+ ++ K+
Sbjct: 298 NPISEQEVMSLLERRFCHSRSCVIIVAEGFGQDWGRGSGGYDASGNKKLIDIGVILTEKV 357

Query: 325 KDHFARLH--KMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGP 382
           K              +KYIDP+YMIRA P +A+D ++C  LA  AVH A+AG TG  +  
Sbjct: 358 KAFLKANKSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAVHEAMAGATGCIIAM 417

Query: 383 VNGRHAYIPFNRINERQNQVVITDRMWARVLSST 416
            +  +  +P       +  + +  ++W +V   T
Sbjct: 418 RHNNYILVPIKVATSVRRVLDLRGQLWRQVREIT 451
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query441
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 94.83
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 93.1
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 91.91
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 85.37
3l49_A291 ABC sugar (ribose) transporter, periplasmic substr 82.06
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 81.38
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-96  Score=768.91  Aligned_cols=398  Identities=38%  Similarity=0.628  Sum_probs=352.6

Q ss_pred             ccccccchhhhCCCC--CCCcCCCCCCcccccccccccccChhHHHHHHhccCC-------CCcccccccCCcccccccC
Q 013518           19 VLEDVPHLTDYIPDL--PTYPNPLQFNAAYSVVKQYFVNVDDTVSQKIVVHKDS-------PRGTHFRRAGPRQKVYFVS   89 (441)
Q Consensus        19 ~~eav~~l~~~~p~~--p~~~~~l~~n~~~~~~~~~~v~~t~~v~~~~~~~~~~-------~~~~~f~~~~~r~~~~~~~   89 (441)
                      .++.|..+--..|.+  |++++||..|..    ...||.+++.|+..+....+.       .....|+++|||+++||++
T Consensus        20 ~~~~~~~~~~~i~~lg~~~~~~p~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~agpr~~i~f~~   95 (487)
T 2hig_A           20 MLNSVTQEDLKVDRLPGADYPNPSKKYSS----RTEFRDKTDYIMYNPRPRDEPSSENPVSVSPLLCELAAARSRIHFNP   95 (487)
T ss_dssp             SCSSCCTTTTCCEECSCCCEECTTCCGGG----GGGSBSSCCEEESCCCBCC-----CCBBSCCCEEEECCCBSEESSCG
T ss_pred             cccCCCccccccCcCCCCCCCCcccccCC----CCeeeCCCCEEEEeeeccCCCccccccccchHHHHHcCCcceeeecC
Confidence            356777664334433  778899966554    578999999987765432211       1234799999999999999


Q ss_pred             CCeeEEEEccCCCCcchhHHHHHHHHHHHHhcCCcEEEEEccccccccc---CCeeeCChhhhhccccccccccccccCC
Q 013518           90 DEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYS---KNTINLTPKVVNDIHKRGGTILGTSRGG  166 (441)
Q Consensus        90 ~~~~iaIl~sGG~apGmNa~Ir~~v~~~~~~~~~~~v~Gi~~G~~GL~~---~~~~~L~~~~v~~~~~~GGs~LGssR~~  166 (441)
                      +.+||||+||||||||||++||++|+++.+.++..+||||++||+||++   +++++|+|++|++|+++|||+|||+|++
T Consensus        96 ~~~rIgIltsGGdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~~~L~~~~V~~i~~~GGTiLGTsR~~  175 (487)
T 2hig_A           96 TETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGP  175 (487)
T ss_dssp             GGCEEEEEECSSCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSCCCCSC
T ss_pred             CCcEEEEEecCCCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCEEECCHHHHHHHHhCCCCeeccCCCC
Confidence            9999999999999999999999999998765676799999999999974   6999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhCCCEEEEEcCCCchHHHHHHHHHHHHcCCCceEEEeeccccCCCCCCCCCCChhhHHHHHHHHHHHH
Q 013518          167 HDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAA  246 (441)
Q Consensus       167 ~~~~~i~~~l~~~~Id~LvvIGGdgs~~~a~~L~~~~~~~~~~i~vvgIPkTIDNDi~~td~s~GfdTA~~~~~~~i~~i  246 (441)
                      ++.++++++|++++||+||+||||||+++|++|++++++++++|+||||||||||||++||+|||||||+++++++|+++
T Consensus       176 ~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~~~~eaId~i  255 (487)
T 2hig_A          176 QDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAA  255 (487)
T ss_dssp             CCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCceEEEEEecCCCccHHHHHHhhccCCCCEEEcCCCCCChhhH-HHHHh-----------------------h
Q 013518          247 HVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGE-ESLQS-----------------------M  302 (441)
Q Consensus       247 ~~~a~s~~~rv~iVEvMGr~~G~LA~~~aLA~~~ad~iliPE~~~~l~~~-e~l~~-----------------------~  302 (441)
                      ++||.||++||||||||||+|||||+++|||++.||+|||||.||+++++ +.++.                       .
T Consensus       256 ~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~~i~~~i~~r~~~k~~~IIvVaEGag~~~~~~~  335 (487)
T 2hig_A          256 YAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQEVMSLLERRFCHSRSCVIIVAEGFGQDWGRGS  335 (487)
T ss_dssp             HHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHHHHHHHHHHHTTSCSEEEEEEETTTTGGGCCC-
T ss_pred             HHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccc
Confidence            99999987899999999999999999999999339999999999999977 21111                       0


Q ss_pred             hhhhccCCcchhhhHHHHHHHHHHHhccccceee---eeeeeCCCceeccCCCCcchHHHHHHHHHHHHHHHHcCCCceE
Q 013518          303 NQQDASGNKLLQDVGLWISHKIKDHFARLHKMAI---NLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFT  379 (441)
Q Consensus       303 ~~~d~~G~~~l~~i~~~l~~~I~~~~~~~~~~~~---~~r~i~pgy~qRgg~p~a~Dr~~a~~lG~~AV~~~~~G~tg~m  379 (441)
                      ..+|++||+++.+++.+|+++|+++++.. +..+   ++|+++|||+|||++||++||+||++||.+||+++++|+||+|
T Consensus       336 ~~~Da~G~~~l~~i~~~l~~~i~~~~~~~-g~~~~~f~~R~~~lGh~QRgg~Psa~Dr~la~~lG~~AV~~l~~G~tg~m  414 (487)
T 2hig_A          336 GGYDASGNKKLIDIGVILTEKVKAFLKAN-KSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAVHEAMAGATGCI  414 (487)
T ss_dssp             -CBCTTSCBCCCCHHHHHHHHHHHHHHTT-TTTSSSCEEEEECCHHHHHSSCCCHHHHHHHHHHHHHHHHHHHTTEESEE
T ss_pred             cccccccCcchhHHHHHHHHHHHHHHhhc-CccccccceEEccCCcCccCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence            12588999999999999999999998522 2223   6899999999999999999999999999999999999999999


Q ss_pred             EEEECCeEEeechhhhhhcCCccCcCHHHHHHHHHhcCCCCC
Q 013518          380 VGPVNGRHAYIPFNRINERQNQVVITDRMWARVLSSTNQPSF  421 (441)
Q Consensus       380 Vg~~~~~~~~vPl~~v~~~~k~v~~~~~~~~~~l~~t~qp~~  421 (441)
                      |++++++++++||++++...|.+++++.||+++++.++||.-
T Consensus       415 Vgi~~~~i~~vPl~ev~~~~k~v~~~~~~w~~~~~~~~~~~~  456 (487)
T 2hig_A          415 IAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITVDLGS  456 (487)
T ss_dssp             EEEETTEEEEEEHHHHTTEEEEECTTSHHHHHHHHHSCCCC-
T ss_pred             EEEECCEEEEEEHHHHHccCCCcCcchHHHHHHHHHhCCcch
Confidence            999999999999999999999999999999999999999863
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 441
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 3e-56
d2f48a1 550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 8e-55
d2f48a1550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 4e-12
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 2e-54
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Escherichia coli [TaxId: 562]

 Score =  186 bits (474), Expect = 3e-56
 Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 18/322 (5%)

Query: 96  IVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKR 155
           ++T GG  PG+N  IR +V     +    +++GI  GY G Y    + L    V+D+  R
Sbjct: 7   VLTSGGDAPGMNAAIRGVV--RSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINR 64

Query: 156 GGTILGTSRGGHDTSK-----IVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKV 210
           GGT LG++R      +      +++++ RGI+ + +IGGDG+  GA  + E         
Sbjct: 65  GGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFP----- 119

Query: 211 AVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYCGFI 270
              G+P TIDNDI   D + GF TA+     AI+     + S    I VV++MGRYCG +
Sbjct: 120 -CIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS-HQRISVVEVMGRYCGDL 177

Query: 271 AMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKLLQDVGLWISHKIKDHFAR 330
            + A + +   +  ++PE  F  E   +           + ++             HF  
Sbjct: 178 TLAAAI-AGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIE 236

Query: 331 LHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYI 390
             +     +     ++ R       D +  + +   A+   +AGY G  VG  N +  + 
Sbjct: 237 -KETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHH 295

Query: 391 PFNRINERQNQVVITDRMWARV 412
                 E   +       W   
Sbjct: 296 DIIDAIENMKRPF--KGDWLDC 315
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query441
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d2f48a1550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 85.56
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 82.84
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 80.65
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=8.3e-79  Score=609.15  Aligned_cols=305  Identities=28%  Similarity=0.394  Sum_probs=268.8

Q ss_pred             eeEEEEccCCCCcchhHHHHHHHHHHHHhcCCcEEEEEcccccccccCCeeeCChhhhhccccccccccccccCCC----
Q 013518           92 VHACIVTCGGLCPGLNTVIREIVCGLYHMYGVSKILGIDGGYRGFYSKNTINLTPKVVNDIHKRGGTILGTSRGGH----  167 (441)
Q Consensus        92 ~~iaIl~sGG~apGmNa~Ir~~v~~~~~~~~~~~v~Gi~~G~~GL~~~~~~~L~~~~v~~~~~~GGs~LGssR~~~----  167 (441)
                      +|||||||||||||||++|+++++++.+ + +.+|||+++||+||+++++++|+++++++|+++|||+|||+|++.    
T Consensus         2 krIaIl~sGG~~pgiNa~i~~~v~~~~~-~-~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~~~~   79 (319)
T d4pfka_           2 KRIGVLTSGGDSPGMNAAIRSVVRKAIY-H-GVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTE   79 (319)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHH-T-TCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTSSSH
T ss_pred             CEEEEECcCCCcHHHHHHHHHHHHHHHH-C-CCEEEEEccchHHhcCCCcccCCHHHHHHHHhcCccccccCCCCccccc
Confidence            4999999999999999999999998864 3 469999999999999999999999999999999999999999853    


Q ss_pred             -CHHHHHHHHHHhCCCEEEEEcCCCchHHHHHHHHHHHHcCCCceEEEeeccccCCCCCCCCCCChhhHHHHHHHHHHHH
Q 013518          168 -DTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRQRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAA  246 (441)
Q Consensus       168 -~~~~i~~~l~~~~Id~LvvIGGdgs~~~a~~L~~~~~~~~~~i~vvgIPkTIDNDi~~td~s~GfdTA~~~~~~~i~~i  246 (441)
                       ++++++++|++++||+||+|||||||++|++|+++      .++|||||||||||+++||+||||+||+++++++|+++
T Consensus        80 ~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~Gf~TA~~~~~~~i~~l  153 (319)
T d4pfka_          80 EGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKI  153 (319)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBTHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCccccccHHHHHHHHHHHHHHH
Confidence             46889999999999999999999999999999763      46799999999999999999999999999999999999


Q ss_pred             HHhhhcCCceEEEEEecCCCccHHHHHHhhccCCCCEEEcCCCCCChhhHHHHHhhhhhhccCCcc---hhh----hHHH
Q 013518          247 HVEAESIENGIGVVKLMGRYCGFIAMYATLGSRDVDCCLIPESPFYLEGEESLQSMNQQDASGNKL---LQD----VGLW  319 (441)
Q Consensus       247 ~~~a~s~~~rv~iVEvMGr~~G~LA~~~aLA~~~ad~iliPE~~~~l~~~e~l~~~~~~d~~G~~~---l~~----i~~~  319 (441)
                      +++|+|+ +||||||+|||+|||||++++||+ +||+|||||.||+++++  +....+....|+..   +..    .+..
T Consensus       154 ~~~a~s~-~rv~ivEvMGR~aG~lA~~~~la~-~a~~iliPE~~~~~~~~--~~~i~~~~~~~k~~~ivvvsEG~~~~~~  229 (319)
T d4pfka_         154 RDTATSH-ERTYVIEVMGRHAGDIALWSGLAG-GAETILIPEADYDMNDV--IARLKRGHERGKKHSIIIVAEGVGSGVD  229 (319)
T ss_dssp             HHHHHHT-TCEEEEEECCSSCCHHHHHHHHHT-TCSEEECTTSCCCHHHH--HHHHHHHHHTTCSCEEEEEETTTCCHHH
T ss_pred             HhhcccC-cceEEEEecCCCCcHHHHHhhccC-CCcEEEecCCCCCHHHH--HHHHHHHHhhcCCeeEEEEecccchhhh
Confidence            9999986 579999999999999999999999 79999999999999987  22222222222221   111    1556


Q ss_pred             HHHHHHHHhccccceeeeeeeeCCCceeccCCCCcchHHHHHHHHHHHHHHHHcCCCceEEEEECCeEEeechhhhhhcC
Q 013518          320 ISHKIKDHFARLHKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAVAGYTGFTVGPVNGRHAYIPFNRINERQ  399 (441)
Q Consensus       320 l~~~I~~~~~~~~~~~~~~r~i~pgy~qRgg~p~a~Dr~~a~~lG~~AV~~~~~G~tg~mVg~~~~~~~~vPl~~v~~~~  399 (441)
                      +.+.+++..+.      .+|+..|||+|||++|+++||++|++||.+||+++++|+||+||+++++++.++||+++++++
T Consensus       230 ~~~~i~~~~g~------~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~mv~i~~~~~~~vpl~~v~~~~  303 (319)
T d4pfka_         230 FGRQIQEATGF------ETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQLVDHDIAEALANK  303 (319)
T ss_dssp             HHHHHHHHHCC------CEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEEEHHHHTTSC
T ss_pred             hhhhhhhhcCc------eeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCEEEEEcHHHHHhcC
Confidence            77777777653      468889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCcCHHHHHHHHH
Q 013518          400 NQVVITDRMWARVLS  414 (441)
Q Consensus       400 k~v~~~~~~~~~~l~  414 (441)
                      |+++++...+.+.|+
T Consensus       304 k~v~~~l~~~~~~l~  318 (319)
T d4pfka_         304 HTIDQRMYALSKELS  318 (319)
T ss_dssp             CCCCHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHhcC
Confidence            999987666666553
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure