Citrus Sinensis ID: 013794

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430------
Protein Sequence
MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFGNFHMSQSSYGSHYLSHEEKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHcccccccHHHHHHHHHHHHHHccccccccHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFaaprcseipelgAIRDIFEKKYGKDFvsaatdlrpnsgvnRMLIEKLsvrtptgeVKLKVMKEIAKEFQIDWDTTESEMELLKpaeeriggpdtffsasslpvkhvpvqsveqnrphtrsvvsnrergtmqfeDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFGnfhmsqssygshylsheekrptdvgsgnfhrrnsynassansdikfdvcdhdqdnkmegppggkvlrrhsynaptahsdiqwdesdydeeieveapsgctslppertpppippslgkqgsfhrvhpklpdyEDLAARFEALKYRK
Flexible Loop (DISEMBL)
MTLSVARTMKLSIFLFFKkfnsskckTAAKMAVARIKLLRNKREAVVRQMRRDIALLlqskqdatarIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIfaaprcseipELGAIRDIFEKKYGKDFVsaatdlrpnsgvnrmlieklsvrtptgevkLKVMKEIAKefqidwdttesEMELLKPAEERIGGPDTFFSASSLPVKhvpvqsveqnrphtrsvvsnrergtMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFGNFHMSQSSYGSHYLSHEEKRPTDVGSGNFHRRNSynassansdiKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEapsgctslppeRTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK
Low Complexity Region (SEG)
MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTMQFEDTasaaeaaadsakkavaaaqaaaylasRDSKQFTQAFGNFHMSQSSYGSHYLSHEEKRPTDVGSGNFHRRnsynassansDIKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLppertpppippSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK
Disordered region (IsUnstruct)
******RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDT***************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
************IFLFFKKFNSSKCKTAAKMAVARIKL****************ALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTT**********************************************************************************************************************************************************************************************************************************DYEDLAARFEALKY**
Disordered Region (DISEMBL)
MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTMQFE**************************ASRDSKQFTQAFGNFHMSQSSY****************SGNFHRRNSYNASSANSDIKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK
Disordered Region (DISPRO)
*TLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEM*L************************************************************************************************************************************************************************************************************************PKLPDYEDLAARFEALKY**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTMQFEDTxxxxxxxxxxxxxxxxxxxxxAYLASRDSKQFTQAFGNFHMSQSSYGSHYLSHEEKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	436	2.2.26 [Sep-21-2011]
Q54I39	369	IST1-like protein OS=Dict	yes	no	0.405	0.479	0.363	1e-29
P53990	364	IST1 homolog OS=Homo sapi	yes	no	0.422	0.505	0.331	2e-22
Q568Z6	366	IST1 homolog OS=Rattus no	yes	no	0.389	0.464	0.340	2e-22
Q9CX00	362	IST1 homolog OS=Mus muscu	yes	no	0.389	0.469	0.340	3e-22
Q5R6G8	364	IST1 homolog OS=Pongo abe	yes	no	0.422	0.505	0.331	3e-22
Q3ZBV1	364	IST1 homolog OS=Bos tauru	yes	no	0.389	0.467	0.335	8e-22
P53843	298	Vacuolar protein sorting-	yes	no	0.385	0.563	0.286	1e-13
O74490	271	Vacuolar protein sorting-	yes	no	0.279	0.450	0.330	1e-10

>sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1

 Score =  131 bits (330), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 116/179 (64%), Gaps = 2/179 (1%)

Query: 13  IFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEH 72
           +F F   ++S K K   K+AV+RI++L+NK+  +VR  +R++A LL+ K + +ARIRVE 
Sbjct: 1   MFGFGPSYDSYKLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVET 60

Query: 73  VIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGA 132
           +IR++ ++   + IE+ CEL+ AR+++I    E P ++KE I ++++++ R  +IPEL  
Sbjct: 61  IIRDEYLIECFQIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQRI-QIPELEQ 119

Query: 133 IRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDW 191
           I++  + KYGK   + A +   ++ VN  ++ KLS  TP   +  + + EIA++F +DW
Sbjct: 120 IKNQLKAKYGKGLENEA-NCHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEKFNVDW 177

Dictyostelium discoideum (taxid: 44689)

>sp|P53990|IST1_HUMAN IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1

 Score =  107 bits (267), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 6/190 (3%)

Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65

Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125

Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTES 196
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++    
Sbjct: 126 AKYSKEYGKLC---RTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSV 182

Query: 197 EMELLKPAEE 206
            M    P  E
Sbjct: 183 VMAEAPPGVE 192

Proposed to be involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvment in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells.

Homo sapiens (taxid: 9606)

>sp|Q568Z6|IST1_RAT IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 6/176 (3%)

Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65

Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125

Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++
Sbjct: 126 AKYSKEYGKLC---RTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYE 178

Proposed to be involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvment in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells.

Rattus norvegicus (taxid: 10116)

>sp|Q9CX00|IST1_MOUSE IST1 homolog OS=Mus musculus GN=Ist1 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 6/176 (3%)

Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65

Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125

Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++
Sbjct: 126 AKYSKEYGKLC---RTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYE 178

Proposed to be involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvment in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells.

Mus musculus (taxid: 10090)

>sp|Q5R6G8|IST1_PONAB IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1

 Score =  106 bits (265), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 6/190 (3%)

Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65

Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125

Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTES 196
            KY K +       R N    VN  L+ KLSV  P   +  + + EIAK + + ++    
Sbjct: 126 AKYSKGYGKLC---RTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSV 182

Query: 197 EMELLKPAEE 206
            M    P  E
Sbjct: 183 VMAEAPPGVE 192

Proposed to be involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvment in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells.

Pongo abelii (taxid: 9601)

>sp|Q3ZBV1|IST1_BOVIN IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1

 Score =  105 bits (261), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 6/176 (3%)

Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
             + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   IKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65

Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125

Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++
Sbjct: 126 AKYSKEYGKLC---RTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYE 178

Proposed to be involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvment in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells.

Bos taurus (taxid: 9913)

>sp|P53843|IST1_YEAST Vacuolar protein sorting-associated protein IST1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IST1 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 10/178 (5%)

Query: 22  SSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLA 81
           + K KT  KM + R++  + K++A+ +Q RR +A LL + ++  A  RVE +I +   + 
Sbjct: 9   TIKLKTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIE 68

Query: 82  ANEFIELFCELIVARLSIIAK--------RRECPADLKEGIASVIFAAPRCSEIPELGAI 133
             E +EL+CEL++AR+ +I          +      + E I S+I+A     E+ EL  +
Sbjct: 69  LLEILELYCELLLARVQVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQL 128

Query: 134 RDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDW 191
           +D+   K   +FV+    +  +  V   +I+K S   P  E+    +KEIAK + + +
Sbjct: 129 KDLMAWKINVEFVNGV--IADHIDVPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPY 184

Involved in a late step in sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles. The lumenal sequestrated membrane proteins are targeted into the vacuole after fusion of the endosome with the vacuole. Regulates the recruitment of VPS4 to the ESCRT-III complex, probably in conjunction with DID2, and VPS4 catalyzes the disassembly of the ESCRT-III complex.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O74490|IST1_SCHPO Vacuolar protein sorting-associated protein ist1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ist1 PE=3 SV=1

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 2/124 (1%)

Query: 23  SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAA 82
           S+ +   K+A +RI++LR K EA+ +Q RR++AL L+S   A A+ R+E +I +   +  
Sbjct: 2   SRLQIQLKLAASRIEILRQKEEALAKQARRNVALGLKSYSPALAKARIEPLIMQDIYIEL 61

Query: 83  NEFIELFCELIVARLSIIAKRR-ECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKY 141
            E +++  E++  R  ++ KR        K  +  V+ AAP+  +I EL  + D   K Y
Sbjct: 62  LELLQVDVEILANRCVVLEKRAFNDSMSFKSSLYHVMAAAPQL-QIKELRFVHDFLVKLY 120

Query: 142 GKDF 145
           GK+F
Sbjct: 121 GKEF 124

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	436
224071359	490	predicted protein [Populus trichocarpa]	0.997	0.887	0.609	1e-129
359497471	436	PREDICTED: uncharacterized protein LOC10	0.956	0.956	0.625	1e-125
79497106	466	Regulator of Vps4 activity in the MVB pa	0.961	0.899	0.561	1e-121
297802362	465	hypothetical protein ARALYDRAFT_491075 [	0.961	0.901	0.569	1e-119
357517831	434	IST1-like protein [Medicago truncatula]	0.922	0.926	0.604	1e-118
356559234	441	PREDICTED: uncharacterized protein LOC10	0.887	0.877	0.569	1e-116
356502079	438	PREDICTED: uncharacterized protein LOC10	0.981	0.977	0.604	1e-116
449434100	423	PREDICTED: uncharacterized protein LOC10	0.928	0.957	0.595	1e-114
3367591	430	putative protein [Arabidopsis thaliana]	0.905	0.918	0.558	1e-111
255561333	463	protein with unknown function [Ricinus c	0.876	0.825	0.491	1e-109

>gi|224071359|ref|XP_002303421.1| predicted protein [Populus trichocarpa] gi|222840853|gb|EEE78400.1| predicted protein [Populus trichocarpa]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 295/484 (60%), Positives = 336/484 (69%), Gaps = 49/484 (10%)

Query: 1   MTLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQS 60
           +T    + MKL+I +F  +FNSSKCKTAAKMAVARIKLLRNKREAV+RQMRRDIALLLQS
Sbjct: 7   VTSHTKKFMKLTISIFCPRFNSSKCKTAAKMAVARIKLLRNKREAVMRQMRRDIALLLQS 66

Query: 61  KQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFA 120
            QDATARIRVEHVIREQNVLAANEFIELFCEL+V+RLSIIAKRRECPADLKEGIAS+IFA
Sbjct: 67  GQDATARIRVEHVIREQNVLAANEFIELFCELVVSRLSIIAKRRECPADLKEGIASLIFA 126

Query: 121 APRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVM 180
           +PRCSEIPEL A+R IFEKKYGKDFVSAATDLRPNSGVNRMLI+KLSVRTPTGEVKLKVM
Sbjct: 127 SPRCSEIPELVALRKIFEKKYGKDFVSAATDLRPNSGVNRMLIDKLSVRTPTGEVKLKVM 186

Query: 181 KEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSV 240
           KEIAKE QI+WDT ESE ELLK  EE I GP TF SASSLP++  P QSVE N+P  RS 
Sbjct: 187 KEIAKEHQIEWDTEESEKELLKAPEEMIEGPHTFVSASSLPIRRAPFQSVEPNQPIARS- 245

Query: 241 VSNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFGNFH------ 294
            +  E G M FEDT SAA+AAA+SAK+A+AAAQAAAYLA+    Q +   G  H      
Sbjct: 246 TNEGETGNMHFEDTVSAAQAAAESAKQAIAAAQAAAYLANNGLNQVSSVSGLDHKLNTSN 305

Query: 295 -------MSQSSYG--------------------------------SHYLSHEEKRPTDV 315
                  +S +S G                                SHY  +E  RP   
Sbjct: 306 INHGLGVLSGNSTGLSMPNHSQINYQRMDHYSDGPGRTYESQNFDRSHYPGNEGTRPIQT 365

Query: 316 GSGNFH-RRNSYNASSANSDIKFDVCDHDQDNKME--GPPGGKVLRRHSYNAPTAHSDIQ 372
            S + + RR+SYN +        +V      N++      G  + RR SYN+ + HSDI+
Sbjct: 366 DSKHVNRRRHSYNETMPKQMDGQNVSRRHSYNEVRPMQMDGENISRRQSYNSSSPHSDIK 425

Query: 373 WDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEAL 432
           +DESD DEEIE E P      PPER PPP+P S        RVHPKLPDY++LAARFEAL
Sbjct: 426 FDESDCDEEIETEEPPAGVCPPPERCPPPVPSSHVNLDPVARVHPKLPDYDELAARFEAL 485

Query: 433 KYRK 436
           KYRK
Sbjct: 486 KYRK 489

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497471|ref|XP_003635529.1| PREDICTED: uncharacterized protein LOC100853848 [Vitis vinifera]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 279/446 (62%), Positives = 327/446 (73%), Gaps = 29/446 (6%)

Query: 2   TLSVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSK 61
           T S  + MKL + +F + F+SSKCKT AKMA+ARIKLLRNKREAVVRQMRRDIALLLQS 
Sbjct: 8   TSSCKKLMKLGLSIFRRGFSSSKCKTMAKMAMARIKLLRNKREAVVRQMRRDIALLLQSG 67

Query: 62  QDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAA 121
           QDATARIRVEHVIREQN+LAANEF+ELFCELI+ARL+II+K+R+CPADLKEGI+S+IFAA
Sbjct: 68  QDATARIRVEHVIREQNILAANEFLELFCELIIARLTIISKQRDCPADLKEGISSLIFAA 127

Query: 122 PRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMK 181
           PRCS+IPEL AIRD FEKKYGKDFVSAATDLRP+ GVNRMLI+KLSVRTP GEVKLKVMK
Sbjct: 128 PRCSDIPELLAIRDNFEKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRTPMGEVKLKVMK 187

Query: 182 EIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVV 241
           EIAKE+QI+WDTTESE ELLKP EE I GP TF SASS+PVK  P Q  + N+P  RS  
Sbjct: 188 EIAKEYQIEWDTTESENELLKPPEELINGPCTFVSASSMPVKPKPSQPSDLNKPTARST- 246

Query: 242 SNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFG---NFHMSQS 298
              E   M F+D  SAAEAAA+SA KA+AAAQAAAYLA++     TQ+ G   N ++S +
Sbjct: 247 GTEESPPMHFKDMESAAEAAAESANKAIAAAQAAAYLANKGPNLVTQSPGFNNNLNVSST 306

Query: 299 -----SYGSHYLSHEEKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDHDQDNKMEGPPG 353
                SY  + + +E K P     G  H   S++ S            H  + +   P  
Sbjct: 307 DHGLRSYSQNNMGYEAKIP-----GRMHESQSFDRS------------HHLNTEERRPNN 349

Query: 354 G---KVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQG 410
           G   +  RRHSYNAP+AHS+I++DESD DEEIE +        PP R PPP+PPS  +Q 
Sbjct: 350 GDDRQAYRRHSYNAPSAHSNIKFDESDSDEEIETQDTYAGIQPPPGRDPPPVPPSHFQQS 409

Query: 411 SFHRVHPKLPDYEDLAARFEALKYRK 436
               VHPKLPDY+ L ARFEALKYRK
Sbjct: 410 PVPSVHPKLPDYDALTARFEALKYRK 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79497106|ref|NP_195298.2| Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana] gi|332661154|gb|AEE86554.1| Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/461 (56%), Positives = 316/461 (68%), Gaps = 42/461 (9%)

Query: 7   RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
           + MK S+ LF + FNSSKCKTAAKMAVARIKL+RNKR  VV+QMRRDIA+LLQS QDATA
Sbjct: 13  KLMKFSLSLFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATA 72

Query: 67  RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
           RIRVEHVIREQN+ AANE IELFCELIV+RL+II K+++CP DLKEGIAS+IFAAPRCSE
Sbjct: 73  RIRVEHVIREQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSE 132

Query: 127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
           IPELG +RDIF KKYGKDFVSAATDLRP+ GVNRMLI+KLSVR P GE KLK+MKEIAKE
Sbjct: 133 IPELGDLRDIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKE 192

Query: 187 FQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRER 246
           FQ+DWDTTE+E ELLKP EE I GP  F SASSLPV    +     N P   +    R  
Sbjct: 193 FQVDWDTTETEQELLKPQEESIDGPRKFVSASSLPVNRAAI-----NEPIDPTKAVPRST 247

Query: 247 GTM----QFEDTASAAEAAADSAKKAVAAAQAAAYLASR---DSKQFTQAFGN-FHMSQS 298
            +M     + DT SAAEAA + AK+AVAAAQ A+ LA+R    +K+F+ +  +  H   S
Sbjct: 248 SSMSINTHYHDTESAAEAATELAKQAVAAAQVASLLATRRDSSNKEFSVSSDHSTHQKDS 307

Query: 299 SYGSHYLSH--EEKRPTDVGSGNFH-----------RRNSYNASSANSDIKFDVCDHDQD 345
            Y  H+  H    ++  D  + +++           RR+SYN    N        D++++
Sbjct: 308 QYMDHHHHHPGSRRQSRDSETSSYYAKPGAENRGMGRRHSYNNPGINE------SDYEEE 361

Query: 346 -NKMEGPPGGKVLRRHSYN----APTAHSDIQWDESD-YDEEIEVEAPSG--CTSLPPER 397
               E      + RRHSYN     P A S+I++DESD Y+EE E + PS    +SLPP R
Sbjct: 362 YTNTEAEAKETMRRRHSYNPRSVPPPATSEIKFDESDYYEEETEPDEPSQGRVSSLPPNR 421

Query: 398 TPPPIPPS--LGKQGSFHRVHPKLPDYEDLAARFEALKYRK 436
            PP  P S    +  S H+VHPKLPDY+ LAARFEA+++ K
Sbjct: 422 APPQAPQSGESRQDSSGHQVHPKLPDYDILAARFEAIRHSK 462

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802362|ref|XP_002869065.1| hypothetical protein ARALYDRAFT_491075 [Arabidopsis lyrata subsp. lyrata] gi|297314901|gb|EFH45324.1| hypothetical protein ARALYDRAFT_491075 [Arabidopsis lyrata subsp. lyrata]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 262/460 (56%), Positives = 311/460 (67%), Gaps = 41/460 (8%)

Query: 7   RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
           + MK S+ LF + FNSSKCKTAAKMAVARIKLLRNKR  VV+QMRRDIA+LLQS QDATA
Sbjct: 13  KLMKFSLSLFRRGFNSSKCKTAAKMAVARIKLLRNKRLVVVKQMRRDIAVLLQSGQDATA 72

Query: 67  RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
           RIRVEHVIREQN+ AANE IELFCELIVARL+II K+++CP DLKEGIAS+IFAAPRCSE
Sbjct: 73  RIRVEHVIREQNIQAANEIIELFCELIVARLTIITKQKQCPVDLKEGIASLIFAAPRCSE 132

Query: 127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
           IPELG +RDIFEKKYGKDFVSAATDLRP+ GVNRMLI+KLSVR P GE KLK+MKEIAKE
Sbjct: 133 IPELGDLRDIFEKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGECKLKIMKEIAKE 192

Query: 187 FQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRER 246
           FQ+DWDTTE+E ELLKP EE I GP  F SASSLPV    +     N P   +    R  
Sbjct: 193 FQVDWDTTETEQELLKPQEESIDGPCKFVSASSLPVNREAI-----NEPFDPTKAVPRST 247

Query: 247 GTM----QFEDTASAAEAAADSAKKAVAAAQAAAYLASR--DSKQFTQAFGN-FHMSQSS 299
            +M     + DT SAAEAA + AK+AVAAAQ A+ LA+R   +K+F+ +  +  +   S 
Sbjct: 248 SSMSINTHYHDTESAAEAATELAKQAVAAAQVASLLATRRDSTKEFSVSSDHSTNQKDSQ 307

Query: 300 YGSHYLSH----EEKRPTDVGS---------GNFHRRNSYNASSAN-SDIKFDVCDHDQD 345
           Y  HY  H     E R ++  S              R+SYN    N SD + D       
Sbjct: 308 YMDHYHHHLGSRRESRDSETSSYYAKPSAENRGMGIRHSYNNPGINESDYEGDY------ 361

Query: 346 NKMEGPPGGKVLRRHSYNA----PTAHSDIQWDESDY---DEEIEVEAPSGCTSLPPERT 398
            K +      + RRHSYN+    P A S+I++DESDY   + E E  +    +SLPP R 
Sbjct: 362 TKTKAEAKETMRRRHSYNSRSVPPPATSEIKFDESDYYEEETEPEEPSHGRVSSLPPNRE 421

Query: 399 PPPIPPS--LGKQGSFHRVHPKLPDYEDLAARFEALKYRK 436
           PP  P S    +  S H VHPKLPDY+ LAARFEA+++ K
Sbjct: 422 PPQAPQSGESRRDSSGHHVHPKLPDYDILAARFEAIRHSK 461

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517831|ref|XP_003629204.1| IST1-like protein [Medicago truncatula] gi|355523226|gb|AET03680.1| IST1-like protein [Medicago truncatula]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 270/447 (60%), Positives = 317/447 (70%), Gaps = 45/447 (10%)

Query: 7   RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
           R +KL++ L    FNSSKCKTA+KMAVARIKLLRNKRE VVRQMRRDIA+LLQS QDATA
Sbjct: 13  RIVKLTLALLGLGFNSSKCKTASKMAVARIKLLRNKREVVVRQMRRDIAMLLQSGQDATA 72

Query: 67  RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
           RIRVEHV+REQNVLAANEFIELFCELIVARLSIIAK+RECPADLKEGIAS+IFAAPRCSE
Sbjct: 73  RIRVEHVMREQNVLAANEFIELFCELIVARLSIIAKQRECPADLKEGIASLIFAAPRCSE 132

Query: 127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
           IPEL +++ IFEKKYG+DFVSAATDLRP+ GVNR LI+KLSVRTP GEVKLKV+KEIAKE
Sbjct: 133 IPELVSLKKIFEKKYGRDFVSAATDLRPSCGVNRQLIDKLSVRTPPGEVKLKVLKEIAKE 192

Query: 187 FQIDWDTTESEMELLKPAEERI------------GGPDTFFSASSLPVKHVPVQSVEQNR 234
           +QIDWDT ESE ELLKP EE I             G  TF SAS+LPVK     S+E N+
Sbjct: 193 YQIDWDTAESEKELLKPPEELIFSVEILALLSYQEGQRTFVSASTLPVKTSTTVSMESNK 252

Query: 235 PHTRSVVSNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQFTQAFGN-- 292
             +  V+S+    +M FED+ SAAEAA ++AKKA+AAA+ AAY+A +DS + +Q + N  
Sbjct: 253 -LSGGVISD----SMHFEDSKSAAEAATEAAKKAIAAAEFAAYMAMKDSNEASQPYFNDK 307

Query: 293 FHMSQSSY---GSHYLSHEEKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDHDQDNKME 349
           FH   + Y     H  + EEK          HR +S   S             D  N  +
Sbjct: 308 FHSDPAKYTHNSVHKSTTEEK---------MHRSHSLPRS-------------DHMNNED 345

Query: 350 GPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQ 409
              GGK  RRHSY+  +AH DI++DESD DEEIE E P   T  P    PP    S+ KQ
Sbjct: 346 PSYGGKDYRRHSYHPASAHLDIKFDESDCDEEIEAEEPP-VTFPPKRLPPPVPSSSVVKQ 404

Query: 410 GSFHRVHPKLPDYEDLAARFEALKYRK 436
            S  RVHPKLPDY++L ARF+ALK++K
Sbjct: 405 DSNIRVHPKLPDYDELTARFDALKFKK 431

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559234|ref|XP_003547905.1| PREDICTED: uncharacterized protein LOC100781075 [Glycine max]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/469 (56%), Positives = 309/469 (65%), Gaps = 82/469 (17%)

Query: 7   RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
           R +KL++ L    FNSSKCKTAAKMAVARIKLLRNKRE VVRQMRRDIALLLQS QDATA
Sbjct: 13  RLVKLTLSLLRLGFNSSKCKTAAKMAVARIKLLRNKREVVVRQMRRDIALLLQSGQDATA 72

Query: 67  RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
           RIRVEHV+REQNVLAANEFIELFCEL+VARL II+K+RECPADLKEGIAS+IFAAPRCSE
Sbjct: 73  RIRVEHVMREQNVLAANEFIELFCELVVARLPIISKQRECPADLKEGIASLIFAAPRCSE 132

Query: 127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
           IPEL A+++IF+KKYGKDFVSAA DLRP+ GVNR LIEKLSVRTP GEVKLKV+KEIAKE
Sbjct: 133 IPELVALKNIFDKKYGKDFVSAAVDLRPSCGVNRQLIEKLSVRTPPGEVKLKVLKEIAKE 192

Query: 187 FQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRER 246
            QIDWDTTESE ELLKP EE I GP  F SASSLPVKH    SVE N+P TR     R  
Sbjct: 193 HQIDWDTTESETELLKPPEELIVGPRAFVSASSLPVKHSSNVSVESNQPATRLSGGGRTE 252

Query: 247 GTMQFEDTASAAEAAADSA---------------KKAVAAAQAAAYLASRDSKQFTQAF- 290
             + +ED+ SAAEAAA++A               K+++ A Q  AY    + K +     
Sbjct: 253 A-VYYEDSKSAAEAAAEAAKKAIAAAEVAAYMAMKESIEAPQPYAY----NDKLYNSGVN 307

Query: 291 -GNF----------------------HMSQSSYGSHYLSHEEKRPTDVGSGNFHRRNSYN 327
            G F                      + SQS   S +L+ E+  P   G GN +RR+SY+
Sbjct: 308 SGTFQSNNPAKCGLNKTPKSTTEEKMYRSQSVPRSDHLNSEDTLPDQYG-GNDYRRHSYH 366

Query: 328 ASSANSDIKFDVCDHDQDNKMEGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAP 387
            +SA+SDIKFD  D D                                    EEIE E P
Sbjct: 367 PTSAHSDIKFDESDCD------------------------------------EEIEAEEP 390

Query: 388 SGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLPDYEDLAARFEALKYRK 436
              T +PP R PPP+P S+ KQ S   VHPKLPDY++LAARF+ALK++K
Sbjct: 391 PVVT-MPPNRFPPPVPSSMVKQDSRIHVHPKLPDYDELAARFDALKFKK 438

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502079|ref|XP_003519849.1| PREDICTED: uncharacterized protein LOC100814817 [Glycine max]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 268/443 (60%), Positives = 326/443 (73%), Gaps = 15/443 (3%)

Query: 1   MTL-SVARTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQ 59
           MT+ S  R  K+++ L    FNSSKCKTAAKMAVARIKLLRNKRE VVRQMRRDIALLLQ
Sbjct: 1   MTVASTKRLFKITLSLLRLGFNSSKCKTAAKMAVARIKLLRNKREVVVRQMRRDIALLLQ 60

Query: 60  SKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIF 119
           S QDATARIRVEHV+REQNVLAANEFIELFCEL+VARL+II+K++ECPADLKEGIAS+IF
Sbjct: 61  SGQDATARIRVEHVMREQNVLAANEFIELFCELVVARLAIISKQKECPADLKEGIASLIF 120

Query: 120 AAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKV 179
           AAPRCSEIPEL A+++IFEKKYGKDFVSAA DLRP+ GVNR LIEKLSVRTP GEVKLKV
Sbjct: 121 AAPRCSEIPELVALKNIFEKKYGKDFVSAAVDLRPSCGVNRQLIEKLSVRTPPGEVKLKV 180

Query: 180 MKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRS 239
           +KEIAKE  IDWDTT+SE ELLKP EE I GP  F SASSLPVK   V SV+ N+P TR 
Sbjct: 181 LKEIAKEHHIDWDTTDSEKELLKPPEELIVGPSAFVSASSLPVKPSTVMSVDSNKPATRL 240

Query: 240 VVSNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRD-SKQFTQAFG---NFHM 295
               +      ++D+ SAAEAAA++AK+A+AAA+ AAY+A +D + +  Q +      + 
Sbjct: 241 SRGGKPDAE-HYKDSKSAAEAAAEAAKQAIAAAEVAAYMAMKDYNNEAPQPYAYNDKLYN 299

Query: 296 SQSSYGSHYLSHEEKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDH--DQDNKMEGPPG 353
           S  + G+   ++  K   ++   +      Y + S          DH  ++++ +    G
Sbjct: 300 SGVNSGTFQSNNPAKCTLNMTPKSLTEEKMYRSQS------LPRSDHMNNEEDALPNQYG 353

Query: 354 GKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFH 413
           G   RRHSY+  +AHSDI++DES  DEEIE E P   T +PP R PPP+P SL KQ S  
Sbjct: 354 GNDYRRHSYHPASAHSDIKFDESSCDEEIEAEEPPPVT-MPPNRLPPPVPSSLAKQESHI 412

Query: 414 RVHPKLPDYEDLAARFEALKYRK 436
           RVHPKLPDY++LAARF+ALK++K
Sbjct: 413 RVHPKLPDYDELAARFDALKFKK 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434100|ref|XP_004134834.1| PREDICTED: uncharacterized protein LOC101215810 [Cucumis sativus] gi|449508763|ref|XP_004163404.1| PREDICTED: uncharacterized protein LOC101224934 [Cucumis sativus]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 267/448 (59%), Positives = 320/448 (71%), Gaps = 43/448 (9%)

Query: 2   TLSVARTMKLS---IFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLL 58
           T + AR++K+    I +    FNSSKCKTAAKMAVARIKLLRNKREAVV+QMRRDIALLL
Sbjct: 5   TEAAARSLKIVKQFITILRCGFNSSKCKTAAKMAVARIKLLRNKREAVVKQMRRDIALLL 64

Query: 59  QSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVI 118
           QS QDATARIRVEHVIREQNVLAANE IELFCEL+VARLSIIAK+R+CPADLKEG+AS+I
Sbjct: 65  QSGQDATARIRVEHVIREQNVLAANEIIELFCELVVARLSIIAKQRQCPADLKEGVASLI 124

Query: 119 FAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLK 178
           FAAPRCSEIPEL A+R++FEKKYGKDFVSAA DLRPN GVNR+LI+KLSVRTPTGEVKLK
Sbjct: 125 FAAPRCSEIPELSALRNVFEKKYGKDFVSAAVDLRPNCGVNRLLIDKLSVRTPTGEVKLK 184

Query: 179 VMKEIAKEFQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTR 238
           +MKEIAKE +I+WDTTESE ELLKP+EE I GP TF SA+SLPVK  P+ S   N    R
Sbjct: 185 IMKEIAKEHKIEWDTTESEKELLKPSEELIEGPRTFVSAASLPVK--PIVSHSDNAQIER 242

Query: 239 SVVSNRERGTMQFEDTASAAEAAADSAKKAVAAAQAAAYLASRDSKQ------FTQAFGN 292
           +  S RE  +M F+D+ASAAEAAA +AK+A+AAA+AAAYLA++D  +      F   FG 
Sbjct: 243 TTNS-RENESMHFQDSASAAEAAAKAAKQAIAAAEAAAYLANKDLNRDAGDSGFNLGFGG 301

Query: 293 FHMSQSSYGSHY-LSHEEKRPTD--VGSGNFHRRNSY-NASSANSDIKFDVCDHDQDNKM 348
              + S+    Y ++H+ K   D    + +F R +S  N  + N +  +++         
Sbjct: 302 GPPANSTPTRSYNMNHQFKAGEDGTAPTQSFGRCSSLKNEETRNVNTDYEM--------- 352

Query: 349 EGPPGGKVLRRHSYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGK 408
                    RRHSYN PT   DI++DESD +EE E+E  +       +R     P     
Sbjct: 353 -------AYRRHSYN-PT---DIKFDESDCEEETEMEDEA-------DRGVSRPPDRNPP 394

Query: 409 QGSFHRVHPKLPDYEDLAARFEALKYRK 436
                RVHPKLPDY+ LAARFEALKYRK
Sbjct: 395 PAPSSRVHPKLPDYDTLAARFEALKYRK 422

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3367591|emb|CAA20043.1| putative protein [Arabidopsis thaliana] gi|7270524|emb|CAB80289.1| putative protein [Arabidopsis thaliana]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/437 (55%), Positives = 299/437 (68%), Gaps = 42/437 (9%)

Query: 31  MAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFC 90
           MAVARIKL+RNKR  VV+QMRRDIA+LLQS QDATARIRVEHVIREQN+ AANE IELFC
Sbjct: 1   MAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVIREQNIQAANEIIELFC 60

Query: 91  ELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAAT 150
           ELIV+RL+II K+++CP DLKEGIAS+IFAAPRCSEIPELG +RDIF KKYGKDFVSAAT
Sbjct: 61  ELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDFVSAAT 120

Query: 151 DLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEMELLKPAEERIGG 210
           DLRP+ GVNRMLI+KLSVR P GE KLK+MKEIAKEFQ+DWDTTE+E ELLKP EE I G
Sbjct: 121 DLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTTETEQELLKPQEESIDG 180

Query: 211 PDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTM----QFEDTASAAEAAADSAK 266
           P  F SASSLPV    +     N P   +    R   +M     + DT SAAEAA + AK
Sbjct: 181 PRKFVSASSLPVNRAAI-----NEPIDPTKAVPRSTSSMSINTHYHDTESAAEAATELAK 235

Query: 267 KAVAAAQAAAYLASR---DSKQFTQAFGN-FHMSQSSYGSHYLSH--EEKRPTDVGSGNF 320
           +AVAAAQ A+ LA+R    +K+F+ +  +  H   S Y  H+  H    ++  D  + ++
Sbjct: 236 QAVAAAQVASLLATRRDSSNKEFSVSSDHSTHQKDSQYMDHHHHHPGSRRQSRDSETSSY 295

Query: 321 H-----------RRNSYNASSAN-SDIKFDVCDHDQDNKMEGPPGGKVLRRHSYN----A 364
           +           RR+SYN    N SD + +  + + + K        + RRHSYN     
Sbjct: 296 YAKPGAENRGMGRRHSYNNPGINESDYEEEYTNTEAEAK------ETMRRRHSYNPRSVP 349

Query: 365 PTAHSDIQWDESD-YDEEIEVEAPSG--CTSLPPERTPPPIPPS--LGKQGSFHRVHPKL 419
           P A S+I++DESD Y+EE E + PS    +SLPP R PP  P S    +  S H+VHPKL
Sbjct: 350 PPATSEIKFDESDYYEEETEPDEPSQGRVSSLPPNRAPPQAPQSGESRQDSSGHQVHPKL 409

Query: 420 PDYEDLAARFEALKYRK 436
           PDY+ LAARFEA+++ K
Sbjct: 410 PDYDILAARFEAIRHSK 426

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561333|ref|XP_002521677.1| protein with unknown function [Ricinus communis] gi|223539068|gb|EEF40664.1| protein with unknown function [Ricinus communis]

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 244/496 (49%), Positives = 291/496 (58%), Gaps = 114/496 (22%)

Query: 7   RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
           + MK ++ +F  +F+SS+CKTAAKMAVARIKLLRNKRE VVRQM+RDIALLL+S QDATA
Sbjct: 13  KLMKFTLSIFSPRFSSSRCKTAAKMAVARIKLLRNKREVVVRQMKRDIALLLESGQDATA 72

Query: 67  RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
           R+RVEHVIREQNVLAANEFIELFCEL+VARL+IIAK+RECPADLKEGIAS+IFAAPRC+E
Sbjct: 73  RVRVEHVIREQNVLAANEFIELFCELVVARLTIIAKQRECPADLKEGIASLIFAAPRCAE 132

Query: 127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
           IPELGAI  IFEKKYGKDFVSAATDLRPN GVNR+LI+KLSVRTPTGEVKLK+MKEIAKE
Sbjct: 133 IPELGAIVKIFEKKYGKDFVSAATDLRPNCGVNRILIDKLSVRTPTGEVKLKIMKEIAKE 192

Query: 187 FQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRE- 245
           +QIDWDT ESE ELLK  EERI GP+TF SASSLPVK  P Q+      +   + S  E 
Sbjct: 193 YQIDWDTAESEKELLKAPEERIEGPNTFISASSLPVK--PTQN------NVVDIGSTNEG 244

Query: 246 -RGTMQFEDTAS-----------------------------AAEAAADSAKKAVAAAQAA 275
             G +QF+DTAS                              ++A     K   +A    
Sbjct: 245 ALGNIQFQDTASAAEAAAESAKQAIAAAQAAAHLANKNFNPGSQAPGFDHKLNASAINTG 304

Query: 276 AYLASRDSKQF----------------TQAFGNFHMSQSSYGSHYLSHE----------- 308
             + S ++                   +Q  G  H  Q+   S+Y S E           
Sbjct: 305 FSMLSGNTMGLSMANDPRINCQVMDYQSQGLGRIHEPQNFERSNYASTEETRSMQMDGDR 364

Query: 309 --------EKRPTDVGSGNFHRRNSYNASSANSDIKFDVCDHDQDNKMEGPPGGKVLRRH 360
                   E RP  +   N HRR+SYN SS  S+IKFD  D D++ +ME  P G      
Sbjct: 365 IYRRHSYNETRPNQMDGHNVHRRHSYNTSSPKSEIKFDESDCDEEIEMEESPAG------ 418

Query: 361 SYNAPTAHSDIQWDESDYDEEIEVEAPSGCTSLPPERTPPPIPPSLGKQGSFHRVHPKLP 420
              AP          S +  ++                 P +P                 
Sbjct: 419 -IYAPPPKRPPPPVPSSHIHQVH----------------PKLP----------------- 444

Query: 421 DYEDLAARFEALKYRK 436
           DY+ LAARFEALKY++
Sbjct: 445 DYDSLAARFEALKYQR 460

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	436
TAIR|locus:2127988	466	AT4G35730 "AT4G35730" [Arabido	0.873	0.817	0.523	1.4e-94
TAIR|locus:2026150	649	AT1G34220 "AT1G34220" [Arabido	0.332	0.223	0.609	2.9e-62
TAIR|locus:2031250	323	AT1G25420 [Arabidopsis thalian	0.557	0.752	0.454	9.9e-55
TAIR|locus:2118334	1090	AT4G29440 "AT4G29440" [Arabido	0.490	0.196	0.440	1.2e-54
TAIR|locus:2052035	937	AT2G19710 "AT2G19710" [Arabido	0.525	0.244	0.431	1.9e-51
TAIR|locus:2046951	454	AT2G14830 [Arabidopsis thalian	0.419	0.403	0.347	1.5e-33
TAIR|locus:1006230707	347	AT1G52315 "AT1G52315" [Arabido	0.403	0.507	0.356	1.8e-31
TAIR|locus:2017869	381	AT1G79910 "AT1G79910" [Arabido	0.410	0.469	0.333	2.6e-30
TAIR|locus:2009892	409	AT1G13340 [Arabidopsis thalian	0.419	0.447	0.352	4.2e-30
UNIPROTKB|G4MVP3	304	MGG_01765 "Uncharacterized pro	0.396	0.569	0.363	3.6e-27

TAIR|locus:2127988 AT4G35730 "AT4G35730" [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 209/399 (52%), Positives = 259/399 (64%)

Query:     7 RTMKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATA 66
             + MK S+ LF + FNSSKCKTAAKMAVARIKL+RNKR  VV+QMRRDIA+LLQS QDATA
Sbjct:    13 KLMKFSLSLFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATA 72

Query:    67 RIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSE 126
             RIRVEHVIREQN+ AANE IELFCELIV+RL+II K+++CP DLKEGIAS+IFAAPRCSE
Sbjct:    73 RIRVEHVIREQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSE 132

Query:   127 IPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE 186
             IPELG +RDIF KKYGKDFVSAATDLRP+ GVNRMLI+KLSVR P GE KLK+MKEIAKE
Sbjct:   133 IPELGDLRDIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKE 192

Query:   187 FQIDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPV-QSVEQNRPHTRSVVSNRE 245
             FQ+DWDTTE+E ELLKP EE I GP  F SASSLPV    + + ++  +   RS  S+  
Sbjct:   193 FQVDWDTTETEQELLKPQEESIDGPRKFVSASSLPVNRAAINEPIDPTKAVPRST-SSMS 251

Query:   246 RGTMQFEDTXXXXXXXXXXXXXXXXXXXXXXXXXXRDS--KQFTQAFGNF-HMSQSSYGS 302
               T   +                            RDS  K+F+ +  +  H   S Y  
Sbjct:   252 INTHYHDTESAAEAATELAKQAVAAAQVASLLATRRDSSNKEFSVSSDHSTHQKDSQYMD 311

Query:   303 HYLSH--EEKRPTDVGSGNFHRRXXXXXXXXXXDIKFD-----VCDHDQD-NKMEGPPGG 354
             H+  H    ++  D  + +++ +             ++       D++++    E     
Sbjct:   312 HHHHHPGSRRQSRDSETSSYYAKPGAENRGMGRRHSYNNPGINESDYEEEYTNTEAEAKE 371

Query:   355 KVLRRHSYNA----PTAHSDIQWDESDY-DEEIEVEAPS 388
              + RRHSYN     P A S+I++DESDY +EE E + PS
Sbjct:   372 TMRRRHSYNPRSVPPPATSEIKFDESDYYEEETEPDEPS 410

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2026150 AT1G34220 "AT1G34220" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 2.9e-62, Sum P(3) = 2.9e-62
 Identities = 89/146 (60%), Positives = 119/146 (81%)

Query:    16 FFKK-FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVI 74
             FF K F ++KCKT  K+ + RIKL+RN+REA ++QMRR+IA LL++ Q+ATARIRVEH+I
Sbjct:     7 FFNKGFKAAKCKTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVEHII 66

Query:    75 REQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIR 134
             RE+ ++AA E +ELFCELI  RL II  +RECP DLKE I+SV FAAPRCS++ EL  ++
Sbjct:    67 REEKMMAAQEILELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQQVQ 126

Query:   135 DIFEKKYGKDFVSAATDLRPNSGVNR 160
              +F  KYGK+FV+AA++L+P+SGVNR
Sbjct:   127 ILFVSKYGKEFVAAASELKPDSGVNR 152

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031250 AT1G25420 [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 111/244 (45%), Positives = 166/244 (68%)

Query:     9 MKLSIFLFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARI 68
             M L   LF +    +KCKT+  +A+AR+KLL+NKR+  ++ M+++IA  LQ+ Q+  ARI
Sbjct:     1 MSLLNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARI 60

Query:    69 RVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP 128
             RVEHVIRE N+ AA E +ELFCE I+AR+ I+   +ECP +L+E IAS+IFAAPRCSE+P
Sbjct:    61 RVEHVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVP 120

Query:   129 ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQ 188
             +L  I+++F  KYGK+F+  A++LRP+SGVNR +IEKLS  +P+G  +LK++KEIA+E+ 
Sbjct:   121 DLLQIKNLFGTKYGKEFIMVASELRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQEYS 180

Query:   189 IDWDTTESEMELLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGT 248
             ++WD++ +E E +K  E+ +GG         +       Q   Q+   +R V S     T
Sbjct:   181 LNWDSSATEAEFMKSHEDLLGGAKQIHRQDGISESRPSQQGYGQSSV-SREVESLPAEAT 239

Query:   249 MQFE 252
              +F+
Sbjct:   240 QRFQ 243

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2118334 AT4G29440 "AT4G29440" [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
 Identities = 97/220 (44%), Positives = 150/220 (68%)

Query:    18 KKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQ 77
             + F  +KCK A +MA +R+K+L+NK++  ++Q+RR++A LL+S Q  TA+IRVEHV+RE+
Sbjct:     7 RSFKPAKCKIALQMAASRLKILKNKKDTQIKQLRRELAHLLESGQTQTAKIRVEHVVREE 66

Query:    78 NVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIF 137
               +AA E + ++CEL+VARL +I  ++ CP DLKE +ASV++A+ R +++ EL  I   F
Sbjct:    67 KTVAAYELVGIYCELLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDVGELSDIVKHF 126

Query:   138 EKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESE 197
               KYGKDFVSAA  L+P+SGV+R+L+EKLSV+ P G  K+K++ EIA +  + W+  ES 
Sbjct:   127 SAKYGKDFVSAAIGLQPDSGVSRLLVEKLSVKAPDGPTKIKILTEIATQHNVTWEA-ESL 185

Query:   198 MELLKPAEERIGGPDTFFSASSLPVKHVPVQS--VEQNRP 235
             +E   P E       +  S+ S P   +  +S  ++ N+P
Sbjct:   186 VES-DPKETMSASGAS--SSVSQPATGIKSESSRIQNNQP 222

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2052035 AT2G19710 "AT2G19710" [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
 Identities = 100/232 (43%), Positives = 156/232 (67%)

Query:    20 FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
             F  +KCKTA +MA +R+K+L+NK+E  ++Q+RR++A LL+S Q  TARIRVEHV+RE+  
Sbjct:     9 FKPAKCKTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKT 68

Query:    80 LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEK 139
             +AA E I ++CEL+V RL +I  ++ CP DLKE + SV+FA+ R S++PEL  I   F  
Sbjct:    69 VAAYELIGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTT 128

Query:   140 KYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTESEME 199
             KYGKDF ++A +LRP+SGV+R+L+EKLS + P G  K+K++  IA+E  + W+  +S +E
Sbjct:   129 KYGKDFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVVWEA-QSFVE 187

Query:   200 LLKPAEERIGGPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVS-NRERGTMQ 250
                   E + G ++F  ASS+ +    + S ++  P+  +  + N   G+ +
Sbjct:   188 SDPKDTELLNGANSFQPASSMNMDS-SINSNKEQPPNIHAPATVNAHHGSSE 238

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2046951 AT2G14830 [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
 Identities = 64/184 (34%), Positives = 112/184 (60%)

Query:     7 RTMKLSIFLF-FKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDAT 65
             RT   ++F F F    +SKCK+  K    R+ LL+NK+ A+   +R DIA LL+  +   
Sbjct:    65 RTEHDTMFCFLFGWRRTSKCKSVVKQLQCRLNLLKNKKYAISSHLRNDIAQLLRIGERDR 124

Query:    66 ARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCS 125
             A  R + +  ++N+++    +  F ++I+  LS I +RR+ P  + E +++++FA+ RC 
Sbjct:   125 ALHRAQQLFLDENLMSLYHLLLHFSDIILLNLSYIRRRRDLPDGINEAVSTLVFASARCG 184

Query:   126 EIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAK 185
             ++PEL A+R +F K+YG  FV  A +L P + VN  +IEKLS+ + + + K K++ EI +
Sbjct:   185 DLPELRALRVLFGKRYGNHFVDTALNLLPGNCVNPQVIEKLSIISVSDDAKSKLLGEIVE 244

Query:   186 EFQI 189
             E+ +
Sbjct:   245 EYNL 248

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:1006230707 AT1G52315 "AT1G52315" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
 Identities = 67/188 (35%), Positives = 114/188 (60%)

Query:    17 FK-KFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIR 75
             FK KF      T + M + RI ++R KR A+VR  + DI   L++ QD+ A  R E ++ 
Sbjct:     6 FKPKFYKKSKSTTSYMKI-RIDIVRRKRIAMVRNYKTDIVNFLKNGQDSEAYRRAELLLE 64

Query:    76 EQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRD 135
             E  +++  + IE FC+ I   LS++ K+RECP + +E ++S+I+A     ++PEL  +R 
Sbjct:    65 ELRIISCYDLIERFCDCISENLSLMLKKRECPEECREAVSSLIYATAWVPDVPELKDLRA 124

Query:   136 IFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSV-RTPTGEVKLKVMKEIAKEFQIDWDTT 194
             +F K++G +F++        S VN  L+EK  + R P+ E+K++ +K++A EF I+WD T
Sbjct:   125 VFTKRFG-NFIA--------SSVNHELVEKTELLRPPSRELKIQTVKDVANEFSINWDPT 175

Query:   195 ESEMELLK 202
               ++ LL+
Sbjct:   176 PLKLMLLR 183

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2017869 AT1G79910 "AT1G79910" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
 Identities = 63/189 (33%), Positives = 107/189 (56%)

Query:    15 LFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVI 74
             LF  KF + KCK+  K+   R+  ++ K+ +V + ++ DI  LL++  D  A  R E +I
Sbjct:     5 LFKPKFYT-KCKSLVKITKTRVDTVKRKKNSVCKYLKNDIVDLLKNSLDYNAYGRAEGLI 63

Query:    75 REQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIR 134
              E+  LA  EF+E FC  + + +S++ K   CP + +E I+S+++AA R SE+PEL  +R
Sbjct:    64 EEKRRLACYEFLEQFCNCVASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPELRDLR 123

Query:   135 DIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTT 194
              +F ++YG            +  VN   +E+     P+ E+K+++++EIA+E+ I WD  
Sbjct:   124 SLFAERYGNTL---------DQFVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAK 174

Query:   195 ESEMELLKP 203
               E  L  P
Sbjct:   175 SLEQRLYTP 183

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009892 AT1G13340 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
 Identities = 66/187 (35%), Positives = 111/187 (59%)

Query:    15 LFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVI 74
             L  + F ++K K+   +A+ R+ +L+N+R+A + Q   D+  LL+  Q   A  RV+ V+
Sbjct:     8 LLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRVDQVV 67

Query:    75 REQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIR 134
             ++QN L    FI  +  L + R+ +    R+CP +L E ++ ++FAA R  E PEL  IR
Sbjct:    68 KDQNTLDVLFFIHGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEFPELQEIR 127

Query:   135 DIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKE----FQID 190
             ++   ++GKD  + + +LR N GV+  +I+KLS R P  EV++K +KEIA E     ++D
Sbjct:   128 NVLISRFGKDLAARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAENNIVLKLD 187

Query:   191 WDTTESE 197
               +T +E
Sbjct:   188 QASTSTE 194

GO:0005737 "cytoplasm" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

UNIPROTKB|G4MVP3 MGG_01765 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 273 (101.2 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 65/179 (36%), Positives = 109/179 (60%)

Query:    23 SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLL-QSKQDATARIRVEHVIREQNVLA 81
             +K K   K+++AR+++++ + EA  +  RR +A LL Q K D+ ARIRVE++IR    + 
Sbjct:     9 TKIKVQLKLSIARLRMVQQRDEAASKVQRRAMAQLLDQGKIDS-ARIRVENIIRSDIQVE 67

Query:    82 ANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKY 141
               E +EL+CEL++AR  ++     C   L+E   SVI+AA + +EI EL A+R +   K+
Sbjct:    68 LYEMLELYCELLLARAGLL-DAPTCDPGLEEAAKSVIYAAGK-TEIKELQAVRQLLGDKF 125

Query:   142 GKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDT-TESEME 199
             GK+FV  AT+   +  V+  +++KLSV  P  E+    ++EIA+ + ++W    E E +
Sbjct:   126 GKEFVLVATN-NSDGKVSEKVVKKLSVTPPREELVAGYLEEIARAYGVNWPRRVEQEQD 183

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00030649 hypothetical protein (491 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	436
pfam03398	165	pfam03398, Ist1, Regulator of Vps4 activity in the	2e-82

>gnl|CDD|217533 pfam03398, Ist1, Regulator of Vps4 activity in the MVB pathway

 Score =  250 bits (640), Expect = 2e-82
 Identities = 90/166 (54%), Positives = 128/166 (77%), Gaps = 1/166 (0%)

Query: 26  KTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEF 85
           KT  K+A++R+KLL+NK+EA+ +Q RRD+A LL+  ++ +ARIRVE VIRE N L A E 
Sbjct: 1   KTQLKLAISRLKLLQNKKEALAKQARRDVAQLLKLGKEDSARIRVEQVIREDNYLEALEI 60

Query: 86  IELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDF 145
           +EL+CEL++AR+S++ K +ECP +LKE +AS+IFAAPRC E+PEL  +RD+  +KYGK+F
Sbjct: 61  LELYCELLLARVSLLEKSKECPDELKEAVASLIFAAPRCGELPELQQLRDLLAEKYGKEF 120

Query: 146 VSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDW 191
            +AA D R   GVN  ++EKLSV+ P+ E+  K +KEIAKE+ + W
Sbjct: 121 AAAAVDNRDC-GVNPKIVEKLSVKPPSEELVEKYLKEIAKEYNVPW 165

ESCRT-I, -II, and -III are endosomal sorting complexes required for transporting proteins and carry out cargo sorting and vesicle formation in the multivesicular bodies, MVBs, pathway. These complexes are transiently recruited from the cytoplasm to the endosomal membrane where they bind transmembrane proteins previously marked for degradation by mono-ubiquitination. Assembly of ESCRT-III, a complex composed of at least four subunits (Vps2, Vps24, Vps20, Snf7), is intimately linked with MVB vesicle formation, its disassembly being an essential step in the MVB vesicle formation, a reaction that is carried out by Vps4, an AAA-type ATPase. The family Ist1 is a regulator of Vps4 activity; by interacting with Did2 and Vps4, Ist1 appears to regulate the recruitment and oligomerisation of Vps4. Together Ist1, Did2, and Vta1 form a network of interconnected regulatory proteins that modulate Vps4 activity, thereby regulating the flow of cargo through the MVB pathway. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	436
KOG2027	388	consensus Spindle pole body protein [Cytoskeleton]	100.0
PF03398	165	Ist1: Regulator of Vps4 activity in the MVB pathwa	100.0
KOG3232	203	consensus Vacuolar assembly/sorting protein DID2 [	92.99
KOG3230	224	consensus Vacuolar assembly/sorting protein DID4 [	87.21

>KOG2027 consensus Spindle pole body protein [Cytoskeleton]

Probab=100.00  E-value=4.1e-58  Score=467.17  Aligned_cols=182  Identities=58%  Similarity=0.933  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhcCCCChhH
Q 013794           31 MAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRECPADL  110 (436)
Q Consensus        31 LAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLlaRl~lIe~~kecP~eL  110 (436)
                      ||++||++|+|||+++++|+|+|||+||+.|+.++|||||||||+|||+|+||||||+|||||++||++|+++++||.||
T Consensus         1 l~~~Rl~lLknKk~a~~kq~RrdIA~lL~sg~~~~A~~RvE~li~ee~~~~a~e~le~fCelll~R~~~i~~~~~cp~~l   80 (388)
T KOG2027|consen    1 LAINRLKLLKNKKEALAKQLRRDIADLLKSGQDERARIRVEHLIREENLLEAYEILELFCELLLARLSLIEKQKECPDDL   80 (388)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhcccCCHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCC
Q 013794          111 KEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQID  190 (436)
Q Consensus       111 kEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~KLSv~~Ps~elv~kyL~EIAkEy~I~  190 (436)
                      +|||+|||||||||+|||||++||++|+.|||++|+..|.+++++|+||++||+||++..|+.++|.+||+|||++|||+
T Consensus        81 ~EAVsSlifAA~R~~EvpEL~~i~~~f~~kYGk~f~~~a~~l~p~~~Vn~kiiekLs~~~P~~e~k~k~lkEIA~ey~v~  160 (388)
T KOG2027|consen   81 KEAVSSLIFAAPRLSEVPELREIRDLFVKKYGKEFVKAAIELRPGNGVNRKIIEKLSVEAPPKELKEKYLKEIAKEYNVN  160 (388)
T ss_pred             HHHHHHHHHHhccccccHHHHHHHHHHHHHHhHHHHHHHHhccccCCcCHHHHHHhcCCCCcHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHHHhcCc-hhhhcCCCC
Q 013794          191 WDTTESEMELLKP-AEERIGGPD  212 (436)
Q Consensus       191 w~p~~~e~~l~~~-~e~~l~~~~  212 (436)
                      |+++..+.....+ .++.+.++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~s  183 (388)
T KOG2027|consen  161 WEPDSLSTSEEKSNHEDLLIDPS  183 (388)
T ss_pred             cccCccccccCCCchhhcccccc
Confidence            9999888877776 344444443

>PF03398 Ist1: Regulator of Vps4 activity in the MVB pathway; InterPro: IPR005061 This is a eukaryotic protein family of unknown function

Probab=100.00  E-value=7.1e-57  Score=411.79  Aligned_cols=165  Identities=53%  Similarity=0.923  Sum_probs=154.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 013794           26 KTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAKRRE  105 (436)
Q Consensus        26 Kt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLlaRl~lIe~~ke  105 (436)
                      |++||||++||+++|+||.++++++|+|||+||++|+.++||+|||+||+||+++++||+||+|||+|++|+++|+++++
T Consensus         1 K~~lkla~~Rl~~l~~K~~~~~~~~rkdIa~LL~~g~~~~Ar~rvE~li~ed~~~e~~e~Le~yce~l~~r~~~i~~~k~   80 (165)
T PF03398_consen    1 KTQLKLAISRLKLLQNKRQAQAKQARKDIAQLLKNGKEESARIRVEQLIREDNMIEAYEILELYCELLLARFSLIEKSKE   80 (165)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCT-TS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 013794          106 CPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAK  185 (436)
Q Consensus       106 cP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~KLSv~~Ps~elv~kyL~EIAk  185 (436)
                      ||++|+|||+|||||||||+|+|||+.||++|+.|||++|+.+|++|+ +++||++|++||++.+|+.++|.+||.|||+
T Consensus        81 ~p~~l~eAi~siiyAa~r~~elpEL~~vr~~l~~kyG~~f~~~a~~~~-~~~Vn~~iv~kLs~~~p~~~~v~~~L~eIA~  159 (165)
T PF03398_consen   81 CPPELKEAISSIIYAAPRCGELPELQEVRKQLAEKYGKEFVEAAMENR-DNGVNPRIVEKLSVKPPSEELVEKYLKEIAK  159 (165)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHCCC-HHHHHHHHTTT-TTTS-HHHHHHCS-S---CCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHhCHHHHHHHHHhc-CCCcCHHHHHHcCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998 7899999999999999999999999999999


Q ss_pred             HcCCCC
Q 013794          186 EFQIDW  191 (436)
Q Consensus       186 Ey~I~w  191 (436)
                      +|||+|
T Consensus       160 e~~i~w  165 (165)
T PF03398_consen  160 EYGIPW  165 (165)
T ss_dssp             HCT-SH
T ss_pred             HcCCCC
Confidence            999999

; PDB: 3GGZ_B 3GGY_B 3FRR_A 3FRS_A.

>KOG3232 consensus Vacuolar assembly/sorting protein DID2 [Intracellular trafficking, secretion, and vesicular transport]

Probab=92.99  E-value=3.2  Score=39.93  Aligned_cols=124  Identities=21%  Similarity=0.272  Sum_probs=81.0

Q ss_pred             HHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCchhHH
Q 013794           54 IALLLQSKQDATARIRVEHVIREQNVLAANEFIELF--CELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELG  131 (436)
Q Consensus        54 IAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLEly--CElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlPEL~  131 (436)
                      +-.-|+.|..+-|||-+|+-||-.+  +++.+|-+-  .+-+.+|+..--+.+.+...+---|-++=-|-.- ..   |.
T Consensus        39 ~kkAi~kgN~dvArIyAeNAIRkkn--e~~n~LrlssRvDAVaaRvqTavtmr~Vt~sM~gVvK~md~alkt-mN---Le  112 (203)
T KOG3232|consen   39 LKKAIQKGNMDVARIYAENAIRKKN--EAVNYLRLSSRVDAVAARVQTAVTMRKVTKSMAGVVKSMDSALKT-MN---LE  112 (203)
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC---HH
Confidence            4456889999999999999999876  455555543  6778888877666555544433333332221111 12   33


Q ss_pred             HHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHhhcC----CCCCCHHHHHHHHHHHHHHcCCCCC
Q 013794          132 AIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLS----VRTPTGEVKLKVMKEIAKEFQIDWD  192 (436)
Q Consensus       132 ~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~KLS----v~~Ps~elv~kyL~EIAkEy~I~w~  192 (436)
                      .| .+++.||-+.|...        .|...++++--    .-..+...|..+|.+.|.|+|+++.
T Consensus       113 ki-s~~MDkFE~qFedl--------dvqt~~me~~m~~st~l~tpq~~Vd~Lmq~vADeaGlEln  168 (203)
T KOG3232|consen  113 KI-SQLMDKFEKQFEDL--------DVQTEVMEKAMSGSTALSTPQGDVDSLMQQVADEAGLELN  168 (203)
T ss_pred             HH-HHHHHHHHHHhhhh--------hhHHHHHHHhccCcccccCChhHHHHHHHHHHHHhchhhh
Confidence            33 45778899999643        34445555532    2234578899999999999999986

>KOG3230 consensus Vacuolar assembly/sorting protein DID4 [Intracellular trafficking, secretion, and vesicular transport]

Probab=87.21  E-value=32  Score=33.87  Aligned_cols=164  Identities=17%  Similarity=0.227  Sum_probs=110.1

Q ss_pred             hhcCCCChhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHH
Q 013794           15 LFFKKFNSSKC----KTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFC   90 (436)
Q Consensus        15 lf~~~f~~sKc----Kt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyC   90 (436)
                      +|++..+|.-+    |..|.-|+--|.-=+.+-+.+-|.+-.||=..-++|+.+-.+|-+-+|||--+++.=|...---.
T Consensus         3 lFgk~~tp~e~Lr~nqRal~~a~ReleRer~~le~qeKklvaeIKk~AK~gq~~A~KimAkdLvRtR~~i~kf~~~kaqi   82 (224)
T KOG3230|consen    3 LFGKKKTPAELLRENQRALNKATRELERERQKLELQEKKLVAEIKKTAKQGQMDAVKIMAKDLVRTRRYIKKFQNMKAQI   82 (224)
T ss_pred             cccCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78888887543    34444454444444455555556666777778889999999999999999999999999998888


Q ss_pred             HHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHc-----HHHHHHHhhcCCCCCCCHHHHhh
Q 013794           91 ELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYG-----KDFVSAATDLRPNSGVNRMLIEK  165 (436)
Q Consensus        91 ElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYG-----keFv~aa~elr~~~~VN~kIv~K  165 (436)
                      .-+..|+..+..+...-..++.|- -.+-+-.|-=.+|-++.|-..|..---     .|+...|+++.-+. ...     
T Consensus        83 qaVSl~iQtlkss~sma~aMkGaT-kam~~MNrqmnlpq~qkIm~eFekQse~Mdm~~Emm~daIDdal~~-~ed-----  155 (224)
T KOG3230|consen   83 QAVSLRIQTLKSSTSMAQAMKGAT-KAMAGMNRQMNLPQIQKIMQEFEKQSEIMDMKEEMMDDAIDDALGD-DED-----  155 (224)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cch-----
Confidence            999999999987755555555433 234445564599999998888765421     35666666543221 111     


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHcCCCCC
Q 013794          166 LSVRTPTGEVKLKVMKEIAKEFQIDWD  192 (436)
Q Consensus       166 LSv~~Ps~elv~kyL~EIAkEy~I~w~  192 (436)
                         .--+.++|.++|.||    ||+..
T Consensus       156 ---EEEtd~lvnqVLDEi----Gvdl~  175 (224)
T KOG3230|consen  156 ---EEETDDLVNQVLDEI----GVDLA  175 (224)
T ss_pred             ---hHHHHHHHHHHHHHH----cccHH
Confidence               112355677777766    66553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	436
3frr_A	191	Structure Of Human Ist1(Ntd) - (Residues 1-189)(P21		1e-22
3frs_A	189	Structure Of Human Ist1(Ntd) (Residues 1-189)(P4321		2e-22
3ggy_A	193	Crystal Structure Of S.Cerevisiae Ist1 N-Terminal D		4e-15

>pdb|3FRR|A Chain A, Structure Of Human Ist1(Ntd) - (Residues 1-189)(P21) Length = 191

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 8   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 67
Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 68  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 127
Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++
Sbjct: 128 AKYSKEY---GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYE 180

>pdb|3FRS|A Chain A, Structure Of Human Ist1(Ntd) (Residues 1-189)(P43212) Length = 189

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 20  FNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNV 79
           F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+IRE  +
Sbjct: 6   FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYL 65
Query: 80  LAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFE 138
           + A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  + D   
Sbjct: 66  VEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLC 125
Query: 139 KKYGKDFVSAATDLRPN--SGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
            KY K++       R N    VN  L+ KLSV  P   +  + + EIAK + + ++
Sbjct: 126 AKYSKEY---GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYE 178

>pdb|3GGY|A Chain A, Crystal Structure Of S.Cerevisiae Ist1 N-Terminal Domain Length = 193

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 24  KCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAAN 83
           K KT  KM + R++  + K++A+ +Q RR +A LL + ++  A  RVE +I +   +   
Sbjct: 11  KLKTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELL 70
Query: 84  EFIELFCELIVARLSIIAK--------RRECPADLKEGIASVIFAAPRCSEIPELGAIRD 135
           E +EL+CEL++AR+ +I          +      + E I S+I+A     E+ EL  ++D
Sbjct: 71  EILELYCELLLARVQVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQLKD 130
Query: 136 IFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDTTE 195
           +   K   +FV+    +  +  V   +I+K S   P  E+    +KEIAK + + +   E
Sbjct: 131 LMAWKINVEFVNGV--IADHIDVPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPYSKLE 188
Query: 196 SEM 198
           + +
Sbjct: 189 NSL 191

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	436
3frr_A	191	Uncharacterized protein KIAA0174; ESCRT, ESCRT-III	5e-77
3ggy_A	193	Increased sodium tolerance protein 1; ESCRT-III li	3e-68
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10

>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A Length = 191

 Score =  237 bits (605), Expect = 5e-77
 Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 2/190 (1%)

Query: 15  LFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVI 74
           +    F + + +   ++ + R+KLL  K+  + ++ R++IA  L + +D  ARIRVEH+I
Sbjct: 3   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 62

Query: 75  REQNVLAANEFIELFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAI 133
           RE  ++ A E +EL+C+L++AR  +I   +E  + L E ++++I+AAPR  SE+ EL  +
Sbjct: 63  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 122

Query: 134 RDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWDT 193
            D    KY K++       +    VN  L+ KLSV  P   +  + + EIAK + + ++ 
Sbjct: 123 ADQLCAKYSKEYGKLCRTNQIG-TVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 181

Query: 194 TESEMELLKP 203
               M    P
Sbjct: 182 DSVVMAEAPP 191

>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A Length = 193

 Score =  214 bits (547), Expect = 3e-68
 Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 10/187 (5%)

Query: 21  NSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVL 80
            + K KT  KM + R++  + K++A+ +Q RR +A LL + ++  A  RVE +I +   +
Sbjct: 8   FTIKLKTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHI 67

Query: 81  AANEFIELFCELIVARLSIIAK--------RRECPADLKEGIASVIFAAPRCSEIPELGA 132
              E +EL+CEL++AR+ +I          +      + E I S+I+A     E+ EL  
Sbjct: 68  ELLEILELYCELLLARVQVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQ 127

Query: 133 IRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTGEVKLKVMKEIAKEFQIDWD 192
           ++D+   K   +FV+          V   +I+K S   P  E+    +KEIAK + + + 
Sbjct: 128 LKDLMAWKINVEFVNGVIADHI--DVPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPYS 185

Query: 193 TTESEME 199
             E+ + 
Sbjct: 186 KLENSLS 192

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 1e-10
 Identities = 70/447 (15%), Positives = 118/447 (26%), Gaps = 133/447 (29%)

Query: 1   MTLSVARTMKLSIFLFFKKF--NSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLL 58
           + L V  + K+   + FK F  N   C +                E V+  +++   LL 
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSP---------------ETVLEMLQK---LLY 207

Query: 59  QSKQDATARIRVEHVIREQNVLAANEFIELFCE------LIVARLSIIAKRRECPA-DLK 111
           Q   + T+R      I+ +      E   L         L+V  L  +   +   A +L 
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--LLNVQNAKAWNAFNLS 265

Query: 112 ---------EGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRML 162
                    + +   + AA        L            K  +    D RP        
Sbjct: 266 CKILLTTRFKQVTDFLSAATTT--HISLDHHSMTLTPDEVKSLLLKYLDCRP-------- 315

Query: 163 IEKLSVRTPTGE-VKLKVMKEIAKEFQIDWD------------TTESEMELLKPAEERIG 209
            + L     T    +L ++ E  ++    WD              ES + +L+PAE R  
Sbjct: 316 -QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-- 372

Query: 210 GPDTFFSASSLPVKHVPVQSVEQNRPHTRSVVSNRERGTMQFEDTASAAEAAADSAKKAV 269
               F   S  P     +            ++S      +   D            K + 
Sbjct: 373 --KMFDRLSVFP-PSAHI---------PTILLS-LIWFDVIKSDV---MVVVNKLHKYS- 415

Query: 270 AAAQAAAYLASRDSKQFTQAFGNFHMSQSSYGSHYLSHEEKRPTDVGSGNFHRR--NSYN 327
                   L  +  K+ T                 +  E K   +      HR   + YN
Sbjct: 416 --------LVEKQPKEST------------ISIPSIYLELKVKLE-NEYALHRSIVDHYN 454

Query: 328 ASSA--NSDIKFDVCD---------H----DQDNKMEGPP---------GGKVLRRHS-- 361
                 + D+     D         H    +   +M               K+  RH   
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI--RHDST 512

Query: 362 -YNAPTAHSDIQWDESDYDEEIEVEAP 387
            +NA  +  +       Y   I    P
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDP 539

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	436
3frr_A	191	Uncharacterized protein KIAA0174; ESCRT, ESCRT-III	100.0
3ggy_A	193	Increased sodium tolerance protein 1; ESCRT-III li	100.0
2gd5_A	179	Charged multivesicular BODY protein 3; CHMP3, ESCR	89.81
3frt_A	218	Charged multivesicular BODY protein 3; ESCRT, ESCR	87.12

>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A

Probab=100.00  E-value=5.2e-66  Score=481.56  Aligned_cols=182  Identities=32%  Similarity=0.568  Sum_probs=177.7

Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 013794           15 LFFKKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIV   94 (436)
Q Consensus        15 lf~~~f~~sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLl   94 (436)
                      ||+++||++|||++||||++||+++|+||+++++++|||||+||++|++++|||||||||+||+++++|||||+|||+|+
T Consensus         3 mf~~~~~~~K~K~~Lklai~Rl~ll~~Kk~~~~k~~RrdIA~LL~~gk~~~AriRvE~iI~ed~~ie~~EilElyCelL~   82 (191)
T 3frr_A            3 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLL   82 (191)
T ss_dssp             -CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhcCCCChhHHHHHHHHHhhCCCC-CCchhHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHhhcCCCCCCH
Q 013794           95 ARLSIIAKRRECPADLKEGIASVIFAAPRC-SEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVRTPTG  173 (436)
Q Consensus        95 aRl~lIe~~kecP~eLkEAVsSLIfAApR~-sDlPEL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~KLSv~~Ps~  173 (436)
                      +|+++|+++++||+||+|||+||||||||| +|||||.+||++|+.|||++|+.+|++|++++ ||++|++||++.+|+.
T Consensus        83 ~R~~li~~~k~cp~~l~EAvsslIyAa~R~~~elpEL~~ir~~l~~KyGkeF~~~a~e~~~~~-Vn~~iv~kLs~~~P~~  161 (191)
T 3frr_A           83 ARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGT-VNDRLMHKLSVEAPPK  161 (191)
T ss_dssp             HTHHHHHSCSSCCGGGHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCHHHHHHHHTTTTSC-SCHHHHHHTCCSCCCH
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHhhhcccccChHHHHHHHHHHHHhCHHHHHHHHHcCCCC-cCHHHHHHcCCCCcCH
Confidence            999999999999999999999999999998 89999999999999999999999999999765 9999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCchhH
Q 013794          174 EVKLKVMKEIAKEFQIDWDTTESE  197 (436)
Q Consensus       174 elv~kyL~EIAkEy~I~w~p~~~e  197 (436)
                      ++|++||+|||++|||+|+|+++-
T Consensus       162 ~lv~~yL~EIA~~y~V~w~p~~~~  185 (191)
T 3frr_A          162 ILVERYLIEIAKNYNVPYEPDSVV  185 (191)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCchhh
Confidence            999999999999999999998653

>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A

Probab=100.00  E-value=3.5e-61  Score=449.70  Aligned_cols=174  Identities=30%  Similarity=0.493  Sum_probs=168.8

Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 013794           18 KKFNSSKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARL   97 (436)
Q Consensus        18 ~~f~~sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLlaRl   97 (436)
                      .+| .+|||++||||++||+++|+||+++++++|||||+||++|++++|||||||||+||+++++|||||+|||+|++|+
T Consensus         6 ~~~-~~KlK~~Lklai~Rl~llq~Kk~~~~k~~RrdIA~LL~~gk~~~AriRvE~iI~ed~~ie~~EilElyCelL~aR~   84 (193)
T 3ggy_A            6 IPF-TIKLKTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELLEILELYCELLLARV   84 (193)
T ss_dssp             CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456 4999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhh--------cCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHhhcCCC
Q 013794           98 SIIAK--------RRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIEKLSVR  169 (436)
Q Consensus        98 ~lIe~--------~kecP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~KLSv~  169 (436)
                      ++|++        +++||+||+|||+|||||||||+|||||.+||++|+.|||++|+.+|++|.  ++||++||+||++.
T Consensus        85 ~ll~~~~~e~~~~~k~cp~~l~EAvsslIyAa~R~~elpEL~~ir~~l~~KyGkeF~~~a~en~--~gVn~kiv~kLs~~  162 (193)
T 3ggy_A           85 QVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQLKDLMAWKINVEFVNGVIADH--IDVPEKIIKKCSPS  162 (193)
T ss_dssp             HHHTTCCSHHHHHHHSSSSSHHHHHHHHHHHGGGCTTCTTHHHHHHHHHHHTCHHHHHHHHHHC--TTCCHHHHHHHSCC
T ss_pred             HHHHhhcccccccccCCCHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhCHHHHHHHHhcC--CCCCHHHHHHcCCC
Confidence            99999        699999999999999999999999999999999999999999999999995  56999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCCCCc
Q 013794          170 TPTGEVKLKVMKEIAKEFQIDWDTT  194 (436)
Q Consensus       170 ~Ps~elv~kyL~EIAkEy~I~w~p~  194 (436)
                      +|+.++|.+||+|||++|||+|++-
T Consensus       163 ~P~~elv~~yL~EIA~ey~V~w~~~  187 (193)
T 3ggy_A          163 VPKEELVDLYLKEIAKTYDVPYSKL  187 (193)
T ss_dssp             CCCHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCCCc
Confidence            9999999999999999999999864

>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A

Probab=89.81  E-value=2  Score=38.83  Aligned_cols=120  Identities=10%  Similarity=0.115  Sum_probs=78.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 013794           23 SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAK  102 (436)
Q Consensus        23 sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLlaRl~lIe~  102 (436)
                      -+++..|+-++..|.--.+|-+..-++...+|-+..+.|+.+.|+|.+..+|+--+...=|--+-.-.+-+..|+..+..
T Consensus        13 r~~~~~L~~~~r~Ldr~~~kle~~ekk~~~~Ikka~k~g~~~~aki~Ak~lvr~rk~~~~l~~~~a~l~~v~~~lqt~~~   92 (179)
T 2gd5_A           13 NEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLA   92 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45788889999999998999999999999999999999999999999999999888744333333333444444333332


Q ss_pred             cCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHH
Q 013794          103 RRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVS  147 (436)
Q Consensus       103 ~kecP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~  147 (436)
                      ....-..++.+ +-++=+.-+.-++|++..+=.-|.    ++|..
T Consensus        93 ~~~v~~am~~~-~~~M~~~n~~m~l~~i~~~M~e~~----~e~~~  132 (179)
T 2gd5_A           93 VLRVAGSLQKS-TEVMKAMQSLVKIPEIQATMRELS----KEMMK  132 (179)
T ss_dssp             HHHHTSSCCCC-SHHHHTTTSSTTSSSCCHHHHHHH----HHHHH
T ss_pred             HHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHH----HHHHH
Confidence            22111111111 122333334348888876655554    55544

>3frt_A Charged multivesicular BODY protein 3; ESCRT, ESCRT-111, CHMP, IST1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein; 4.00A {Homo sapiens}

Probab=87.12  E-value=9.2  Score=36.14  Aligned_cols=120  Identities=10%  Similarity=0.112  Sum_probs=89.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 013794           23 SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLSIIAK  102 (436)
Q Consensus        23 sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd~~ieayEiLElyCElLlaRl~lIe~  102 (436)
                      -+|+..|+-++--|.--.++-+..-++...+|-+..+.|+.+.|||=+..|||--+...=|--+---.+-+.-|+...-.
T Consensus        13 r~~~r~Lr~~~R~LdR~~~kle~eEkk~~~~IKkaakkg~~~~arilAkelVR~Rk~~~rl~~~kaqL~sV~~rlqt~~s   92 (218)
T 3frt_A           13 NEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLA   92 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999988777777777777777766665


Q ss_pred             cCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHH
Q 013794          103 RRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVS  147 (436)
Q Consensus       103 ~kecP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~  147 (436)
                      ...+-..+..++ .++=..-+.-++|+|..+=.-|    .++|..
T Consensus        93 ~~~v~~sM~~st-~~M~~~n~~m~l~~i~~tM~ef----ekE~~k  132 (218)
T 3frt_A           93 VLRVAGSLQKST-EVMKAMQSLVKIPEIQATMREL----SKEMMK  132 (218)
T ss_dssp             CC----CCCCCH-HHHHHHHHSTTSHHHHHHHHHH----HHHHHH
T ss_pred             HHHHHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHH----HHHHHH
Confidence            544443333322 2333333444899988765555    466655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00