Citrus Sinensis ID: 013899


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEALKLEEEFEL
cccHHHHHHHHHHHHHHcccccEEEEEEEcccccccEEEcccccccccEEEEEEEEEEccccccccccEEEEEEEcccHHHHHHHccccccccccccccEEEEEEEEcccccccEEEEEEccccccEEEEEEEEccccccccEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHHHHHHHEEEcccccccccccHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHHHHHccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccEEEEEEEEEEcccccccccccEEEEEccHHHHHHHHHcccccccccccHHHHHHHEEEccccccccEEEEEEccccccEEEEEEccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcHEEEEEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEccccHHHHHHHHHcccccccc
MGVSKSLVFCVLVFQLLSLSSAEIRFneirndnrpiipfdefgfthrgrleLNVSkislsnpdldfskvgfflcTHDSWLHVLQQLEDGEITCVLQSDLIKQVFtfnnlngkseystiysendadqYTLVFANCLQQLKVSMDVRSAMYNlegrsnnrdylsagktilPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKsyikrtgsahgWDVLFYMFSFLKGITLFTLIVLIGTGwsflkpylqdkekKVLMIVIPLQVVANIAQVVidetgpygqdwiTWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTgykfkpeahnpyfviddEEEEAAAEALKLEEEFEL
MGVSKSLVFCVLVFQLLSLSSAEIRfneirndnrpiiPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEgrsnnrdylsAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEALKLEEEFEL
MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMlavvvlkavnllCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQvfllvdvvcccavlFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDeeeeaaaealkleeefel
*****SLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVID*******************
****KSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHV*********TCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLRE*********VNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEE*E*****LKLE**FE*
MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEALKLEEEFEL
MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAA*E**********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEALKLEEEFEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query434 2.2.26 [Sep-21-2011]
Q8BUV8551 Protein GPR107 OS=Mus mus yes no 0.771 0.607 0.397 2e-71
Q5VW38600 Protein GPR107 OS=Homo sa no no 0.788 0.57 0.355 1e-67
Q9NPR9543 Protein GPR108 OS=Homo sa no no 0.735 0.587 0.400 3e-66
Q91WD0569 Protein GPR108 OS=Mus mus no no 0.831 0.634 0.375 3e-65
Q6P6V6577 Protein GPR108 OS=Rattus no no 0.751 0.564 0.392 2e-64
Q148L1548 Protein GPR108 OS=Bos tau no no 0.725 0.574 0.398 1e-63
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2 Back     alignment and function desciption
 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 210/340 (61%), Gaps = 5/340 (1%)

Query: 92  TCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAM 148
           + V    + ++ F+ +  +G   +   ++ +  DQ   Y+L F  C        +  S  
Sbjct: 181 STVDSKAITERSFSIHKNDGVVSFQFFFNISTDDQEGLYSLYFHKCSGNNVKPGEQASFS 240

Query: 149 YNLE-GRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAV 207
            N+     N   YLSAG+  LP++Y   +L +F+   +WIH+L ++R  VF+IH+ M A+
Sbjct: 241 LNIAITEKNPNSYLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAAL 300

Query: 208 VVLKAVNLLCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPY 266
              K+++L+  A D  YI   G    GW V++Y+   LKG  LF  I LIGTGW+F+K  
Sbjct: 301 PFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHI 360

Query: 267 LQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVW 326
           L DK+KK+ MIVIPLQV+AN+A ++I+ T     ++  WK    LVD++CC A+LFP+VW
Sbjct: 361 LSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVW 420

Query: 327 SIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVV 386
           SI++L+EA+ TDGKAA+NL KL LFR YY++++CYIYFTR++ + L+    +++ W   +
Sbjct: 421 SIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQL 480

Query: 387 AGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEAL 426
             E ATL F+V TGYKF+P + NPY  +  E+++   E++
Sbjct: 481 LDETATLVFFVLTGYKFRPASDNPYLQLSQEDDDLEMESV 520





Mus musculus (taxid: 10090)
>sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1 Back     alignment and function description
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3 Back     alignment and function description
>sp|Q91WD0|GP108_MOUSE Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1 Back     alignment and function description
>sp|Q6P6V6|GP108_RAT Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1 Back     alignment and function description
>sp|Q148L1|GP108_BOVIN Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query434
307136090439 seven transmembrane receptor [Cucumis me 1.0 0.988 0.832 0.0
449456801439 PREDICTED: protein GPR107-like [Cucumis 1.0 0.988 0.832 0.0
255555767432 lung seven transmembrane receptor, putat 0.949 0.953 0.865 0.0
449495034439 PREDICTED: protein GPR107-like [Cucumis 1.0 0.988 0.830 0.0
297805416438 hypothetical protein ARALYDRAFT_915976 [ 0.976 0.968 0.826 0.0
356499602441 PREDICTED: protein GPR107-like [Glycine 1.0 0.984 0.812 0.0
15238277439 Lung seven transmembrane receptor family 0.949 0.938 0.841 0.0
356547507443 PREDICTED: protein GPR107-like [Glycine 0.956 0.936 0.839 0.0
224072345436 predicted protein [Populus trichocarpa] 0.951 0.947 0.865 0.0
21555372439 unknown [Arabidopsis thaliana] 0.949 0.938 0.836 0.0
>gi|307136090|gb|ADN33938.1| seven transmembrane receptor [Cucumis melo subsp. melo] Back     alignment and taxonomy information
 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/436 (83%), Positives = 401/436 (91%), Gaps = 2/436 (0%)

Query: 1   MGVSKSLVFCVLVFQLLSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLS 60
           M +  S +F +++F L   S AEIRF EIRNDNRPIIPFD FGF+H GRLELNV+ ++LS
Sbjct: 4   MDLFSSSMFILIIFLLPFSSFAEIRFTEIRNDNRPIIPFDVFGFSHGGRLELNVTHLTLS 63

Query: 61  --NPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTI 118
             NPDLD SKVGFFLCT +SWLHV+QQLE+G+I+C LQSDL+K V+TF++L  +  +  +
Sbjct: 64  DSNPDLDLSKVGFFLCTRESWLHVIQQLEEGDISCALQSDLVKPVYTFDSLKKQDRFGVL 123

Query: 119 YSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLI 178
           YSE DADQYTLVFANCLQQ KVSMDV+SAMYNLEG++  RDYLSAGKTILPRIYF+FSLI
Sbjct: 124 YSETDADQYTLVFANCLQQFKVSMDVQSAMYNLEGKNARRDYLSAGKTILPRIYFVFSLI 183

Query: 179 YFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLF 238
           YF LA +WIHVLY+KRLTV+ IHFFMLAVV+LKA+NLLCEAEDKSYIKRTGSAHGWDVLF
Sbjct: 184 YFSLAVVWIHVLYKKRLTVYGIHFFMLAVVILKALNLLCEAEDKSYIKRTGSAHGWDVLF 243

Query: 239 YMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPY 298
           Y+FSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGP+
Sbjct: 244 YIFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPF 303

Query: 299 GQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVV 358
            Q+W+TWKQVFLLVDV+CCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVV
Sbjct: 304 EQEWVTWKQVFLLVDVICCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVV 363

Query: 359 ICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDDEE 418
           ICYIYFTRVVVY LETITSY+YLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFV+DDEE
Sbjct: 364 ICYIYFTRVVVYALETITSYRYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVVDDEE 423

Query: 419 EEAAAEALKLEEEFEL 434
           EEAAAEALKLE+EFEL
Sbjct: 424 EEAAAEALKLEDEFEL 439




Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456801|ref|XP_004146137.1| PREDICTED: protein GPR107-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255555767|ref|XP_002518919.1| lung seven transmembrane receptor, putative [Ricinus communis] gi|223541906|gb|EEF43452.1| lung seven transmembrane receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449495034|ref|XP_004159716.1| PREDICTED: protein GPR107-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297805416|ref|XP_002870592.1| hypothetical protein ARALYDRAFT_915976 [Arabidopsis lyrata subsp. lyrata] gi|297316428|gb|EFH46851.1| hypothetical protein ARALYDRAFT_915976 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356499602|ref|XP_003518627.1| PREDICTED: protein GPR107-like [Glycine max] Back     alignment and taxonomy information
>gi|15238277|ref|NP_199024.1| Lung seven transmembrane receptor family protein [Arabidopsis thaliana] gi|9757954|dbj|BAB08442.1| unnamed protein product [Arabidopsis thaliana] gi|16648953|gb|AAL24328.1| Unknown protein [Arabidopsis thaliana] gi|20259830|gb|AAM13262.1| unknown protein [Arabidopsis thaliana] gi|332007383|gb|AED94766.1| Lung seven transmembrane receptor family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356547507|ref|XP_003542153.1| PREDICTED: protein GPR107-like [Glycine max] Back     alignment and taxonomy information
>gi|224072345|ref|XP_002303695.1| predicted protein [Populus trichocarpa] gi|222841127|gb|EEE78674.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|21555372|gb|AAM63843.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query434
TAIR|locus:2165815439 AT5G42090 [Arabidopsis thalian 0.935 0.924 0.766 4.9e-172
TAIR|locus:2074949439 AT3G09570 "AT3G09570" [Arabido 0.940 0.929 0.480 8.6e-104
TAIR|locus:2146233440 Cand7 "candidate G-protein Cou 0.942 0.929 0.475 1.1e-103
TAIR|locus:2181783428 Cand6 "candidate G-protein Cou 0.935 0.948 0.430 3.3e-86
FB|FBgn0030109738 CG12121 [Drosophila melanogast 0.709 0.417 0.411 1.8e-68
UNIPROTKB|F1MT29556 GPR107 "Uncharacterized protei 0.709 0.553 0.402 6e-68
RGD|1305882551 Gpr107 "G protein-coupled rece 0.758 0.597 0.379 1.1e-66
UNIPROTKB|G5E994571 GPR107 "G protein-coupled rece 0.543 0.413 0.367 5e-66
UNIPROTKB|F6USA6577 GPR107 "Uncharacterized protei 0.546 0.410 0.371 6.4e-66
UNIPROTKB|E2QTY0605 GPR107 "Uncharacterized protei 0.564 0.404 0.368 2.7e-65
TAIR|locus:2165815 AT5G42090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1672 (593.6 bits), Expect = 4.9e-172, P = 4.9e-172
 Identities = 316/412 (76%), Positives = 355/412 (86%)

Query:    11 VLVFQLLSLS--SAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSN--PDLDF 66
             +L+  L+S+S  SAEIR +EIR+D+RPIIP DEFGFTH GRLEL+ SKI LSN  PDLD 
Sbjct:    10 ILILLLISISIASAEIRKSEIRSDDRPIIPLDEFGFTHSGRLELDASKIWLSNSNPDLDL 69

Query:    67 SKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNG--KSEYSTIYSENDA 124
             SKVGFFLCT D+W+HV+QQLE+ EITC LQSDL+K VFTFNNL G  KS +ST+++ENDA
Sbjct:    70 SKVGFFLCTRDAWVHVIQQLEEEEITCALQSDLVKHVFTFNNLKGGDKSRFSTVFTENDA 129

Query:   125 DQYTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAG 184
             DQY+LVFANCLQQ+K+SMDVRSAMYNLEG+   RDYLSAG+T+LP++YFLFS+IYF LA 
Sbjct:   130 DQYSLVFANCLQQVKISMDVRSAMYNLEGKKGGRDYLSAGRTVLPKVYFLFSVIYFSLAA 189

Query:   185 LWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSAHGWDVLFYMFSFL 244
              WI+VLY+KRLTVF IHFFM            CEAEDKSYIK+TG+AHGWDVLFY+F+FL
Sbjct:   190 TWIYVLYKKRLTVFAIHFFMLGVVVLKALNLLCEAEDKSYIKKTGTAHGWDVLFYIFNFL 249

Query:   245 KGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWIT 304
             KGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVAN AQVVIDETGPYGQDW+T
Sbjct:   250 KGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANFAQVVIDETGPYGQDWVT 309

Query:   305 WKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYF 364
             WKQ              FPIVWSIKNLREAA+TDGKAAVNL+KLTLFRQYYIVVICYIYF
Sbjct:   310 WKQIFLLVDVVCCCAVLFPIVWSIKNLREAAKTDGKAAVNLVKLTLFRQYYIVVICYIYF 369

Query:   365 TRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPYFVIDD 416
             TRVVVY LETITSYKY+WTSVVA ELATLAFY+FTGYKF+PE HNPYFV+DD
Sbjct:   370 TRVVVYALETITSYKYMWTSVVASELATLAFYLFTGYKFRPEVHNPYFVVDD 421




GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2074949 AT3G09570 "AT3G09570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146233 Cand7 "candidate G-protein Coupled Receptor 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181783 Cand6 "candidate G-protein Coupled Receptor 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0030109 CG12121 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1MT29 GPR107 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1305882 Gpr107 "G protein-coupled receptor 107" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G5E994 GPR107 "G protein-coupled receptor 107, isoform CRA_c" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F6USA6 GPR107 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2QTY0 GPR107 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query434
pfam06814287 pfam06814, Lung_7-TM_R, Lung seven transmembrane r 1e-41
>gnl|CDD|219188 pfam06814, Lung_7-TM_R, Lung seven transmembrane receptor Back     alignment and domain information
 Score =  148 bits (376), Expect = 1e-41
 Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 14/264 (5%)

Query: 156 NNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNL 215
           N   YLSA +  L   Y + SL Y +L  LW  +L++    +  +  ++ AV+ L  V L
Sbjct: 29  NPYGYLSASEAPLMPFYGIMSLAYVLLGALWFFILFKYWHDILPLQKYIAAVIALGMVEL 88

Query: 216 LCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKV 274
                D ++I   GS+  G  V   + S LK      L++++  G+  +KP L D  KKV
Sbjct: 89  AFHYIDYAFINSKGSSPEGLAVFASILSALKKTLSRILLLIVSLGYGIVKPTLGDTLKKV 148

Query: 275 LMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREA 334
             I +   V A +  +V +       D      +F L+ +      LF I W  ++L + 
Sbjct: 149 AGIGLLYFVAACVLFIVRESG--IESDSSYKLVLFFLLPL--ALLDLFFIYWIFRSLSKT 204

Query: 335 ARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITS--------YKYLWTSVV 386
            R D K   NL+KL+L+R +  ++ C +  + +++   +            +K  W    
Sbjct: 205 LR-DLKLRRNLVKLSLYRHFTNMLACSVVASFIIILVEKIYFKTTDSCNKYWKTAWLITA 263

Query: 387 AGELATLAFYVFTGYKFKPEAHNP 410
             EL +L   V   Y ++P  +NP
Sbjct: 264 FWELLSLVLLVTICYLWRPSQNNP 287


This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins. Length = 287

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 434
KOG2569440 consensus G protein-coupled seven transmembrane re 100.0
PF06814295 Lung_7-TM_R: Lung seven transmembrane receptor; In 100.0
KOG2568518 consensus Predicted membrane protein [Function unk 100.0
PF10192257 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane dom 99.65
KOG2569440 consensus G protein-coupled seven transmembrane re 98.24
KOG4290429 consensus Predicted membrane protein [Function unk 98.21
>KOG2569 consensus G protein-coupled seven transmembrane receptor [Signal transduction mechanisms] Back     alignment and domain information
Probab=100.00  E-value=2.9e-100  Score=750.97  Aligned_cols=416  Identities=56%  Similarity=0.983  Sum_probs=402.1

Q ss_pred             cccceeEEEEeeecCCCCCceeeccccCCCCcEEEEEEeeeeecC--CCCCCceEEEEEecccChHHHH--HhhccCCCc
Q 013899           17 LSLSSAEIRFNEIRNDNRPIIPFDEFGFTHRGRLELNVSKISLSN--PDLDFSKVGFFLCTHDSWLHVL--QQLEDGEIT   92 (434)
Q Consensus        17 ~~~~~~~~~~~~~~~d~r~~i~i~~FGF~~gG~~~v~v~~~~~~~--~~~~~~~~gf~l~~~~~~~~~~--~~~~~~~~~   92 (434)
                      .+.+.|+|++.++.+|+|+.|.+++|||.+-|+..|.++.+.+.+  |+.|.+++|||+.+++++.++.  ..++++++.
T Consensus        18 ~~~t~~~~~~~~i~~d~rp~~~~e~~~~~~~~~~~v~~~~~~v~s~~p~~d~sr~~~f~~s~~s~~~~l~p~~~~q~~~~   97 (440)
T KOG2569|consen   18 ISITRAEIKSLTISDDSRPMILLEKFGQTHVGHVTVSASSVAVVSSDPNLDASRLGFFLLSGESEMAVLAPLEFPQSRGP   97 (440)
T ss_pred             hhhhhhhccCcccccCcCcchhhhccceeeecceecccceEEeecCCCCCchhcCCCcccCchHHHhhhhhcccccccCc
Confidence            367999999999999999999999999999999999999888764  6778999999999999998887  778888899


Q ss_pred             ccccCCcceeeEEeecCCC--CcceeEEEEeccCCcEEEEEEEecCCceeEEEEEEEEEE-ecCCCCCccccCccCccch
Q 013899           93 CVLQSDLIKQVFTFNNLNG--KSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYN-LEGRSNNRDYLSAGKTILP  169 (434)
Q Consensus        93 C~l~~~~~~~~f~f~~~~~--~~~~~~~~~V~~~g~Y~l~f~~C~~~~~~~~~~~v~~~n-~n~~G~~~~yLsa~~~plp  169 (434)
                      |.+++.++.++++|.|+++  .+.++.+|+++++|.|+++|+||.|....++.+++++++ .+|+| .+||||||+.+||
T Consensus        98 ~~~~s~~~l~~~t~~ql~~~p~s~~~~~~~~kd~~~y~l~f~nc~~~~~~sm~V~~~~~~~~~p~g-~~dyl~ag~~~Lp  176 (440)
T KOG2569|consen   98 CVLDSLYVLHMFTFVQLSPPPGSGFSHHYPLKDPGQYSLFFANCVPETKGSMVVRVEMYNLLEPNG-SRDYLSAGETSLP  176 (440)
T ss_pred             cccccccchhhhhhhhcCCCCCCCceEEecCCCCceEEEEEeeccccccceEEEEEEeeeccCCCC-cccccccccccCc
Confidence            9999999999999999864  577889999999999999999999999999999999999 66888 8999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHH
Q 013899          170 RIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVLFYMFSFLKGITL  249 (434)
Q Consensus       170 ~lY~~~~~~y~~l~~~W~~~~~k~r~~v~~Ih~~m~~li~l~~l~~~~~~~~y~~in~~G~~~~~~v~~~I~~~~k~~l~  249 (434)
                      .+|+.|+++|+..++.|.+.|+++++.+++||.+|++++++|++++++++++|||++++|+++||++.+||++++||.++
T Consensus       177 ~ly~~~sl~Yl~~~v~w~~l~~~sk~~v~rIh~lma~lV~lKsl~l~~~al~k~~~sk~g~~~gw~vl~yI~~~lkg~ll  256 (440)
T KOG2569|consen  177 RLYFDFSLLYLDFLVFWCYLLKQSKSVVYRIHDLMAVLVFLKSLSLICHALNKHYVSKTGTVHGWAVLFYIFHFLKGVLL  256 (440)
T ss_pred             hhHHHHHHHHHHhhhheeeeEeechHHHHHHHHHHHHHHhHcchHHHhhccceEEEEecCceeeeeehhhHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccccceecccccchhhhhhhHHHHHHHHHHHHhhcccCCCCCcccchhhhhhhhhHHHHHHHHHHHHHHHH
Q 013899          250 FTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIK  329 (434)
Q Consensus       250 f~lillIg~Gwg~vkp~L~~~~kkv~~ivi~l~vlania~iv~~~~~~~~~~~~~w~~i~~lvd~~~~~aI~f~ivwsi~  329 (434)
                      |.++++||+||+++||+|++|+||++|+++|+||++|+|.|+++|+++++++|.+|++++.++|+.|||+|.|||+||||
T Consensus       257 f~tivligTgwSflk~~l~dkekkv~miviplqvlania~Iv~dEte~~~q~~~tw~~if~lvd~~cc~ai~fpIvwSi~  336 (440)
T KOG2569|consen  257 FTTIVLIGTGWSFLKPKLQDKEKKVLMIVIPLQVLANIASIVTDETEPLTQDWVTWNQIFLLVDLKCCCAILFPIVWSIR  336 (440)
T ss_pred             eeEEEeeccCceeechhhccccceEEEEEecHHHHHHhHheeecCCCcchhhhhhhhheeeeecceeeeEEeeeeeeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcchHHHHhHHHHHHHHHHHHHHHHHHHHhhheeeeEEeccccccccHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 013899          330 NLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHN  409 (434)
Q Consensus       330 ~L~~~s~tdgka~~nl~KL~lfr~Fy~~lv~yiyft~iiv~~l~~~~~~~~~W~~~~~~e~~~l~ffv~i~~~fRP~~~n  409 (434)
                      ||||+|+|||||++|+.||++||+||+++++|+|||||+++.++..++++|+|++.++.|+++++||+++||+|||.+.|
T Consensus       337 ~L~E~s~tDgkaa~nl~kL~lfrqfyi~vi~yiyftrIvv~~l~~~~~fky~W~~~~a~E~at~aFy~l~gykFRP~~~~  416 (440)
T KOG2569|consen  337 HLRETSKTDGKAAANLIKLPLFRQFYIVVIGYIYFTRIVVFALKTIAVFKYQWLSFAAEEMATLAFYVLMGYKFRPVESN  416 (440)
T ss_pred             hhhhccCCcchhhcCcccchHHHHHHhhhhhhhhhhhhhhhhhhhccceeeeeHHHHHHHHHHHHHHhhheeeeeecccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceeccCchhHHHHHhcccccccCC
Q 013899          410 PYFVIDDEEEEAAAEALKLEEEFEL  434 (434)
Q Consensus       410 ~yl~~~~~~~~~~~~~l~~~~~~~~  434 (434)
                      +|+.++|||||++|++++ ||+||+
T Consensus       417 ~Yf~vddeeee~~~~~l~-e~~~~~  440 (440)
T KOG2569|consen  417 EYFVVDDEEEEADELALK-EDEFEE  440 (440)
T ss_pred             CccccCchhhhhhhhhcc-cccccC
Confidence            999999999999999999 999986



>PF06814 Lung_7-TM_R: Lung seven transmembrane receptor; InterPro: IPR009637 This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins Back     alignment and domain information
>KOG2568 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF10192 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane domain; InterPro: IPR019336 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG2569 consensus G protein-coupled seven transmembrane receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG4290 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query434
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 114/360 (31%)

Query: 20  SSAEIRFNEIR----NDNRPIIPFDEFGFTHRGRLELNVSKI--SLSNPDLDFSKVGFFL 73
           S     + E R    NDN+    +      +  RL+    K+  +L    L   +    +
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKY------NVSRLQP-YLKLRQALLE--L---RPAKNV 153

Query: 74  CTH------DSWLHVLQQLEDGEITCVLQSDLIKQVFTFNNLNGKSEYSTIY-----SEN 122
                     +W+  L          V  S  ++    F           I+     + N
Sbjct: 154 LIDGVLGSGKTWV-ALD---------VCLSYKVQCKMDFK----------IFWLNLKNCN 193

Query: 123 DADQYTLVFANCLQQLKVSMDVRS-AMYNLEGRSNN-RDYLSAGKTILPRIYFLFSLIYF 180
             +    +    L Q+  +   RS    N++ R ++ +  L   + +L    +   L+  
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL---RRLLKSKPYENCLL-- 248

Query: 181 ILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLCE----AEDKSYIKRTGSAHGWDV 236
           +L  +        +                 A NL C+       K       +A    +
Sbjct: 249 VLLNVQ-----NAK--------------AWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 237 LFYMFSFLKGITLF-TLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDET 295
              +      +T      +L+     +L    QD  ++VL    P   ++ IA+ + D  
Sbjct: 290 --SLDHHSMTLTPDEVKSLLL----KYLDCRPQDLPREVLTT-NPR-RLSIIAESIRDGL 341

Query: 296 GPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYY 355
                 W  WK V                   +  + E++       +N+++   +R+ +
Sbjct: 342 A----TWDNWKHVNC---------------DKLTTIIESS-------LNVLEPAEYRKMF 375


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00