Citrus Sinensis ID: 014375
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 426 | ||||||
| 224143104 | 410 | predicted protein [Populus trichocarpa] | 0.950 | 0.987 | 0.463 | 2e-95 | |
| 255544798 | 410 | conserved hypothetical protein [Ricinus | 0.946 | 0.982 | 0.444 | 4e-90 | |
| 224075742 | 476 | predicted protein [Populus trichocarpa] | 0.983 | 0.880 | 0.436 | 5e-89 | |
| 224098244 | 439 | predicted protein [Populus trichocarpa] | 0.981 | 0.952 | 0.438 | 9e-89 | |
| 224075754 | 565 | predicted protein [Populus trichocarpa] | 0.974 | 0.734 | 0.438 | 4e-88 | |
| 224144479 | 438 | predicted protein [Populus trichocarpa] | 0.971 | 0.945 | 0.449 | 1e-87 | |
| 224111146 | 436 | predicted protein [Populus trichocarpa] | 0.988 | 0.965 | 0.442 | 2e-85 | |
| 255548976 | 439 | conserved hypothetical protein [Ricinus | 0.983 | 0.954 | 0.426 | 2e-85 | |
| 255544800 | 437 | conserved hypothetical protein [Ricinus | 0.962 | 0.938 | 0.424 | 4e-85 | |
| 255569108 | 421 | conserved hypothetical protein [Ricinus | 0.936 | 0.947 | 0.424 | 3e-84 |
| >gi|224143104|ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/414 (46%), Positives = 272/414 (65%), Gaps = 9/414 (2%)
Query: 18 LSGNLETLHHLSKDCSIYRVAEPTRCLNPSHFTPQMVSIGPFHHGKEELKPMEEHKQRYL 77
+ G L++L LS C IY V + LN +TPQ+VSIGP HHGK EL+PMEEHK+RYL
Sbjct: 1 MRGELDSLPVLSSKCCIYTVPKRLHHLNEKAYTPQLVSIGPLHHGKPELRPMEEHKKRYL 60
Query: 78 KYFLQRTKVRMARFLSFIKERETKLRNCYAETIRNLGSDEFVAMVLVDAVFLIEFFLRYY 137
+ FLQRTK+ + +L I++ E KLR+CYAETI SDEF+ M+LVDA F+IE LRY+
Sbjct: 61 QDFLQRTKLSLVDYLKVIEKNEKKLRDCYAETIE-FSSDEFIKMILVDAAFIIEVLLRYH 119
Query: 138 KRNLR--TDDDRIFKKPKLYLEIQDDFLLVENQLPLFILNDLFDLAKTATYEDAFYENIS 195
+ +R ++DR++ KP +I+ D L+ENQLP FIL DLFD A+ T + +S
Sbjct: 120 FKPMRKEKENDRVYNKPWAIQDIRKDMWLLENQLPFFILEDLFDPARI-TLPSGSNQMLS 178
Query: 196 LAEIAC-FWFENYVIEPLDKNPVKIHFPNAEHFLHLILLCLQPSQSRAQIMLKDQNIPSV 254
+ ++A F + + +E +++ K P +H + + +C QP QS+++ LK IPS
Sbjct: 179 ITKLAYEFSKDLWDLEEMEEKSQKNKSPKVQHLVDFLWICHQPPQSKSKKKLKTLGIPSA 238
Query: 255 KELHQAGVKFKPAAESTKNLLDINFNQGILEIPFFKVYDDTERAYRNLLAFERMHDYNGY 314
ELHQAGVKFK S+KNL DI F GILEIP ++ TE +RNLLAFE+ H Y
Sbjct: 239 TELHQAGVKFKLG--SSKNLFDIKFKNGILEIPRLEIVGATELLFRNLLAFEQCHCSKNY 296
Query: 315 FNDYIIMMACLISCPKDEELLVQNDVIR--LGNDGNIATVFGNLVRGSALDSDDFQYSGV 372
NDY+I++ L++ KD ELLV++ ++ L +D ++ +F LV+ + + D F +SG+
Sbjct: 297 INDYVIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSGL 356
Query: 373 VTDLQAYRKLPWHKWKAALKQNYFNTPWASISVIAAVILLLLTATQTVSSLIAL 426
V +L AY + PWHKW+A LKQ+YFN PW+ IS IAAVILL+LT Q V S++++
Sbjct: 357 VEELNAYCRKPWHKWQATLKQHYFNNPWSIISFIAAVILLVLTTIQAVCSILSV 410
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544798|ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis] gi|223547368|gb|EEF48863.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224075742|ref|XP_002304746.1| predicted protein [Populus trichocarpa] gi|222842178|gb|EEE79725.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224098244|ref|XP_002334570.1| predicted protein [Populus trichocarpa] gi|222873184|gb|EEF10315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224075754|ref|XP_002304752.1| predicted protein [Populus trichocarpa] gi|222842184|gb|EEE79731.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224144479|ref|XP_002325303.1| predicted protein [Populus trichocarpa] gi|222862178|gb|EEE99684.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224111146|ref|XP_002332978.1| predicted protein [Populus trichocarpa] gi|222834309|gb|EEE72786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255548976|ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis] gi|223545488|gb|EEF46993.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255544800|ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis] gi|223547369|gb|EEF48864.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255569108|ref|XP_002525523.1| conserved hypothetical protein [Ricinus communis] gi|223535202|gb|EEF36881.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 426 | ||||||
| TAIR|locus:2116667 | 680 | AT4G31980 "AT4G31980" [Arabido | 0.948 | 0.594 | 0.369 | 4e-67 | |
| TAIR|locus:2148042 | 353 | AT5G11290 "AT5G11290" [Arabido | 0.812 | 0.980 | 0.342 | 5.8e-50 | |
| TAIR|locus:2083123 | 509 | AT3G50150 [Arabidopsis thalian | 0.408 | 0.341 | 0.362 | 1.8e-41 | |
| TAIR|locus:2171127 | 440 | AT5G22540 "AT5G22540" [Arabido | 0.899 | 0.870 | 0.292 | 2.2e-41 | |
| TAIR|locus:2044918 | 448 | AT2G36430 "AT2G36430" [Arabido | 0.896 | 0.852 | 0.288 | 3.6e-41 | |
| TAIR|locus:2083108 | 539 | AT3G50140 [Arabidopsis thalian | 0.387 | 0.306 | 0.347 | 1.1e-40 | |
| TAIR|locus:2074755 | 541 | AT3G50170 "AT3G50170" [Arabido | 0.406 | 0.319 | 0.364 | 2.4e-40 | |
| TAIR|locus:2083078 | 531 | AT3G50120 "AT3G50120" [Arabido | 0.356 | 0.286 | 0.350 | 4.6e-39 | |
| TAIR|locus:2083138 | 503 | AT3G50160 "AT3G50160" [Arabido | 0.828 | 0.701 | 0.308 | 1.6e-38 | |
| TAIR|locus:2083093 | 564 | AT3G50130 [Arabidopsis thalian | 0.349 | 0.264 | 0.376 | 1.6e-37 |
| TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 155/419 (36%), Positives = 230/419 (54%)
Query: 12 EKLADTLSGNLETLHHLSKDCSIYRVAEPTRCLNPSHFTPQMVSIGPFHHGKEELKPMEE 71
+ L D++ L L LS C IY+V R LNP +TP++VS GP H GKEEL+ ME+
Sbjct: 273 DALVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMED 332
Query: 72 HKQRYLKYFLQRTKVRMARFLSFIKERETKLRNCYAETIRNLGSDEFVAMVLVDAVFLIE 131
K RYL F+ RT + + + E R+CYAE ++ L SDEFV M++VD FL+E
Sbjct: 333 QKYRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVK-LHSDEFVEMLVVDGSFLVE 391
Query: 132 FFLRYYKRNLRTDDDRIFKKPKLYLEIQDDFLLVENQLPLFILNDLFDLAKTATYEDAFY 191
LR + LR ++DRIF + ++ D +L+ENQLP F++ ++F L Y+
Sbjct: 392 LLLRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIF-LLLLNYYQQGTP 450
Query: 192 ENISLAEIACFWFENYVIEPLDKNPVKIHFPNAEHFLHLILLCLQPSQ--SRAQIMLKDQ 249
I LA+ F +Y + +D I P EHF+ L+ C P +K
Sbjct: 451 SIIQLAQ-RHF---SYFLSRIDDEKF-ITEP--EHFVDLLRSCYLPQFPIKLEYTTVKVD 503
Query: 250 NIPSVKELHQAGVKFKPAAESTKNLLDINFNQGILEIPFFKVYDDTERAYRNLLAFERMH 309
N P ELH AGV+FKPA E++ LLDI+F G+L+IP V D TE Y+N++ FE+
Sbjct: 504 NAPEATELHTAGVRFKPA-ETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCR 562
Query: 310 DYNGYFNDYIIMMACLISCPKDEELLVQNDVI--RLGNDGNIATVFGNLVRGSALDSDDF 367
N F DYI+++ C I P D +LL+ + +I LGN +++ +F ++ + D F
Sbjct: 563 CSNKNFLDYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSVDVSNLFNSISKEVIYDRR-F 621
Query: 368 QYSGVVTDLQAYRKLPWHKWKAALKQNYFNTPWXXXXXXXXXXXXXXXXXQTVSSLIAL 426
+S + +LQAY PW++WKA L+++YF+ PW Q+V S++AL
Sbjct: 622 YFSMLSENLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILAL 680
|
|
| TAIR|locus:2148042 AT5G11290 "AT5G11290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083123 AT3G50150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083078 AT3G50120 "AT3G50120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 426 | |||
| pfam03140 | 387 | pfam03140, DUF247, Plant protein of unknown functi | 1e-120 |
| >gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function | Back alignment and domain information |
|---|
Score = 353 bits (909), Expect = e-120
Identities = 153/398 (38%), Positives = 219/398 (55%), Gaps = 27/398 (6%)
Query: 34 IYRVAEPTRCLNPSHFTPQMVSIGPFHHGKEELKPMEEHKQRYLKYFLQRTK--VRMARF 91
IYRV R +NP + P++VSIGP+HHGK L+ MEEHK RYL FL RT + +
Sbjct: 1 IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60
Query: 92 LSFIKERETKLRNCYAETIRNLGSDEFVAMVLVDAVFLIEFFLRYYKRNLRTDDDRIFKK 151
L+ ++E E + R CYAE + + S+EFV M+L+D F++E FLR + + ++D +F +
Sbjct: 61 LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLSE-GIYGENDPLFAR 119
Query: 152 PKLYLEIQDDFLLVENQLPLFILNDLFDLAKTATYEDAFYENISLAEIA--CFWFENYVI 209
L I+ D LL+ENQ+P F+L LF+L SL ++A F Y
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELLT-----GRQDVKTSLNDLALRFF----YDC 170
Query: 210 EPLDKNPVKIHFPNAEHFLHLILLCLQPSQSRAQIMLKD---------QNIPSVKELHQA 260
E L I N H L L+ L PS S + IPS EL +A
Sbjct: 171 ESLLPPDDLIEESNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREA 230
Query: 261 GVKFKPAAESTKNLLDINFNQGILEIPFFKVYDDTERAYRNLLAFERMH-DYNGYFNDYI 319
GV+FK ++ +LD++F +G+LEIP V D TE RNL+AFE+ H + Y+
Sbjct: 231 GVRFKRRKTASC-ILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYV 289
Query: 320 IMMACLISCPKDEELLVQNDVI--RLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQ 377
M LI+ +D LL + ++ LG+D +A F L RG D DD SGV D+
Sbjct: 290 AFMDNLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVN 349
Query: 378 AYRKLPWHKWKAALKQNYFNTPWASISVIAAVILLLLT 415
Y + W++WKA L++ YF+ PWA+IS++AAV+LL+LT
Sbjct: 350 RYCRSRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387
|
The function of the plant proteins constituting this family is unknown. Length = 387 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 426 | |||
| PF03140 | 391 | DUF247: Plant protein of unknown function; InterPr | 100.0 |
| >PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-108 Score=842.72 Aligned_cols=372 Identities=44% Similarity=0.748 Sum_probs=333.5
Q ss_pred eeecCCccccCCCCCCccceeeeccccCCCCcccchHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHhhhhhhh
Q 014375 34 IYRVAEPTRCLNPSHFTPQMVSIGPFHHGKEELKPMEEHKQRYLKYFLQRTK---VRMARFLSFIKERETKLRNCYAETI 110 (426)
Q Consensus 34 I~rVP~~lr~~n~~aY~P~~VSIGPyHhg~~~L~~mE~~K~~~~~~~l~r~~---~~l~~~~~~i~~~e~~~R~cY~e~~ 110 (426)
|||||+++|++|+++|+|++|||||||||+++|+.||++||+|++.|++|++ .++++++++|+++|++||+||++++
T Consensus 1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~ 80 (391)
T PF03140_consen 1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI 80 (391)
T ss_pred CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc-ccCcccchhhhhhhhhhhccCchHHHHHHHHHhhhccccccc
Q 014375 111 RNLGSDEFVAMVLVDAVFLIEFFLRYYKRNLRTDDDR-IFKKPKLYLEIQDDFLLVENQLPLFILNDLFDLAKTATYEDA 189 (426)
Q Consensus 111 ~~~~~~eF~~MmllDgcFlLe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQiPffVL~~L~~~~~~~~~~~~ 189 (426)
.++++++|++||++|||||||+|+++.. ..+.+|| ++..+|+...|++||+|||||||||||++||++...+.
T Consensus 81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~---- 154 (391)
T PF03140_consen 81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSK---- 154 (391)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccc----
Confidence 4599999999999999999999998876 2345788 88899999999999999999999999999999998332
Q ss_pred cccchhHHHHHHHhcccCCCCcCCCCCCCCCCCCCCchHHHHHHhhCCCC--C-ccc--cc------cCCccccCHHHHH
Q 014375 190 FYENISLAEIACFWFENYVIEPLDKNPVKIHFPNAEHFLHLILLCLQPSQ--S-RAQ--IM------LKDQNIPSVKELH 258 (426)
Q Consensus 190 ~~~~~~l~~l~~~ff~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~p~~--~-~~~--~~------~~~~~~~sAteL~ 258 (426)
.....++.+++.+||........ ........+++|||||+|.+++|+. . ..+ +. .....|||||||+
T Consensus 155 ~~~~~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~ 232 (391)
T PF03140_consen 155 SDVDESLIDLVLKFFYKHWPSWP--PDEPISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELR 232 (391)
T ss_pred cCccchHHHHHHhHhcccccccc--ccccccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHH
Confidence 24457899999999942111000 0112455678999999999999932 1 111 11 1246799999999
Q ss_pred hcCcEEeeCcCCCC-CccceEEcCceEEeceeEeeCchhHHHHhHHHHHHhcCC-CCchhhHHHHHhhhcCChhhHHHHH
Q 014375 259 QAGVKFKPAAESTK-NLLDINFNQGILEIPFFKVYDDTERAYRNLLAFERMHDY-NGYFNDYIIMMACLISCPKDEELLV 336 (426)
Q Consensus 259 ~aGVkfk~~~~~~~-~llDI~F~~G~L~IP~l~id~~T~~llrNLiA~Eq~~~~-~~~vtsY~~fM~~LI~t~~DV~lL~ 336 (426)
+|||+||+ +++. +++||+|++|+|+||+|.||++|+++||||||||||++. +.+||||+.||++||+|++||++|+
T Consensus 233 ~aGV~fk~--~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~ 310 (391)
T PF03140_consen 233 EAGVKFKP--SETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLR 310 (391)
T ss_pred hCCcEEee--ccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHH
Confidence 99999999 5655 699999999999999999999999999999999999988 8999999999999999999999999
Q ss_pred HCCeee--eCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchHHhHhhhcccccccchHHHHHHHHHHHHHH
Q 014375 337 QNDVIR--LGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWHKWKAALKQNYFNTPWASISVIAAVILLLL 414 (426)
Q Consensus 337 ~~GIi~--lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~~w~a~l~~~yf~npW~~is~~aA~~ll~l 414 (426)
++|||+ +|||+||++|||+||++++.+.+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|++
T Consensus 311 ~kgIi~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~l 390 (391)
T PF03140_consen 311 RKGIIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLL 390 (391)
T ss_pred hCCeEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHh
Confidence 999999 999999999999999999988778999999999999999999999999999999999999999999999999
Q ss_pred H
Q 014375 415 T 415 (426)
Q Consensus 415 t 415 (426)
|
T Consensus 391 T 391 (391)
T PF03140_consen 391 T 391 (391)
T ss_pred C
Confidence 7
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 426 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-07
Identities = 45/331 (13%), Positives = 97/331 (29%), Gaps = 74/331 (22%)
Query: 9 IDMEKLADTLSGNLETLHHLSKDCSIYRVAEPTRCLN--PSHFTPQMVSIGPFHHG--KE 64
I ++ + TL+ + E L K L+ P ++++ P E
Sbjct: 289 ISLDHHSMTLTPD-EVKSLLLK------------YLDCRPQDLPREVLTTNPRRLSIIAE 335
Query: 65 ELKPMEEHKQRYLKYFLQRTKVRMARFLSFIKERETKLRNCYAETIRNLGSDEFVAMVLV 124
++ + + + L+ ++ E R + D V
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE--YRKMF---------DRLS--VFP 382
Query: 125 DAVFLIEFFLRYYKRNLRTDDDRIFKKPKLYLEIQDDFLLVENQLPLFI-LNDL-FDLAK 182
+ + L ++ D + ++ L+ + I + + +L
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVN-----KLHKYSLVEKQPKESTISIPSIYLELKV 437
Query: 183 TATYEDAFYENI--SLAEIACFWFENYVIEPLDK---NPVKIHFPNAEH----------F 227
E A + +I F ++ + LD+ + + H N EH F
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 228 LHL------ILLCLQPSQSRAQIM--LKD---------QNIPSVKELHQAGVKFKPAAES 270
L I + I+ L+ N P + L A + F P E
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557
Query: 271 TKNLL---DINFNQGILEIPFFKVYDDTERA 298
NL+ + + L ++++ +
Sbjct: 558 --NLICSKYTDLLRIALMAEDEAIFEEAHKQ 586
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00