Citrus Sinensis ID: 014434

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
Protein Sequence
MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPPKKIS
Secondary Structure (PSIPRED)
cHHHHHHHHHHccccccccEEEEcccHHHccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEcccccccccccccccccccccccccHHHHHHHccEEEccccccccEEEEEcccccccEEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHcccccccEEEEccHHHHHccHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHcccEEEEcccccEEEEEEcccEEEccEEEEcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHcccEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MEECLQVKLeklsplpsncciyrvpERLRQInekaytpqvvsigplhhgkanLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYhfrqpqkkddhifhkpylieDIWYDMWLLENQLPFFILEDLFALAAieipeqhenptiITVTYEYFKGLeavqgnrlkfppyteARVEHFLDFLRichlpssrnqekqegqqyrkgktvpsvtdlhqAGVRFSLSKSNDLFAIEFknstlhipklkLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGiienwlpdKEAASTLINNLSRGTTLLADRFYFSGLckglndhckRTCYKWRANLKqnyfntpwagisVCGAVFLLILTVIQAVCSVIqvlsppkkis
Flexible Loop (DISEMBL)
MEECLQVKleklsplpsncCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRqpqkkddhIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEipeqhenpTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPssrnqekqegqqyrkgktvpsvtDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIqvlsppkkis
Low Complexity Region (SEG)
MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPPKKIS
Disordered region (IsUnstruct)
**********KLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHL*************************LHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVL*******
Disordered Region (DISOPRED)
*EEC**************CCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQ**SP*****
Disordered Region (DISEMBL)
MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSS*****************PSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPPKKIS
Disordered Region (DISPRO)
MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSS*************GKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPPKKIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	424	2.2.26 [Sep-21-2011]
Q9SD53	476	UPF0481 protein At3g47200	no	no	0.931	0.829	0.299	1e-48
P0C897	529	Putative UPF0481 protein	no	no	0.330	0.264	0.278	2e-12

>sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1

 Score =  194 bits (493), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 218/428 (50%), Gaps = 33/428 (7%)

Query: 18  NCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAI---IS 74
           +CCI+RVPE    +N KAY P+VVSIGP H+G+ +LQ ++ HK R L+ FL  A    + 
Sbjct: 45  SCCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKDVE 104

Query: 75  FDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHI 134
            +  V+ +   E ++R SY+E+++   D  + M++LD  FI+ + L       +  +D I
Sbjct: 105 ENVLVKAVVDLEDKIRKSYSEELKTGHD-LMFMMVLDGCFILMVFLIMS-GNIELSEDPI 162

Query: 135 FHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAV 194
           F  P+L+  I  D+ LLENQ+PFF+L+ L+  + I +        +  + + +FK     
Sbjct: 163 FSIPWLLSSIQSDLLLLENQVPFFVLQTLYVGSKIGVSSD-----LNRIAFHFFKNPIDK 217

Query: 195 QGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQ----QYRKGKT--VPSVTD-- 246
           +G+   +  +   + +H LD +R   LP++   +K        Q  +GK+  VPSV    
Sbjct: 218 EGSY--WEKHRNYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPSVDSKA 275

Query: 247 ---------LHQAGVRFSL--SKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQ 295
                    L   G++F L  SK + +  +  K + L IP+L+      S F N +AFEQ
Sbjct: 276 VPLILSAKRLRLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQ 335

Query: 296 RHY-SENYINDYVFLIHHLVNTAKDVELLVQNG-IIENWLPDKEAASTLINNLSRGTTLL 353
            +  S N I  Y+  +  L+N  +DV  L  +  IIEN        S     +S+     
Sbjct: 336 FYTDSSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFE 395

Query: 354 ADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSV 413
            D  Y + + KG+N++ K+      A  +  +F +PW  +S C  +F+++LT++Q+  ++
Sbjct: 396 VDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAI 455

Query: 414 IQVLSPPK 421
           +  L+  K
Sbjct: 456 LSYLNDKK 463

Arabidopsis thaliana (taxid: 3702)

>sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 82/147 (55%), Gaps = 7/147 (4%)

Query: 240 TVPSVTDLHQAGVRFSLSKSNDLFAIEFKNST--LHIPKLKLQLETESLFRNLIAFEQRH 297
           T+PSV+DLH+AGVRF  +   ++  + F +++   ++P + L + TE++ RNL+A+E  +
Sbjct: 344 TIPSVSDLHKAGVRFKPTAHGNISTVTFDSNSGQFYLPVINLDINTETVLRNLVAYEATN 403

Query: 298 YSENYI-NDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADR 356
            S   +   Y  LI+ ++++ +DV LL + G++ + L   + A+ + N +S+   L    
Sbjct: 404 TSGPLVFTRYTELINGIIDSEEDVRLLREQGVLVSRLKSDQEAAEMWNGMSKSVRLTKVG 463

Query: 357 FYFSGLCKGLNDHCKRTCYKWRANLKQ 383
           F    L K + D  +    +W+  + +
Sbjct: 464 F----LDKTIEDVNRYYTGRWKVKIGR 486

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	424
224143104	410	predicted protein [Populus trichocarpa]	0.959	0.992	0.532	1e-118
255544798	410	conserved hypothetical protein [Ricinus	0.950	0.982	0.489	1e-104
224075744	436	predicted protein [Populus trichocarpa]	0.938	0.912	0.480	3e-98
224098244	439	predicted protein [Populus trichocarpa]	0.950	0.917	0.472	7e-97
224072799	428	predicted protein [Populus trichocarpa]	0.948	0.939	0.465	9e-96
224075748	436	predicted protein [Populus trichocarpa]	0.957	0.931	0.465	1e-94
255548976	439	conserved hypothetical protein [Ricinus	0.957	0.924	0.445	2e-94
224053370	405	predicted protein [Populus trichocarpa]	0.938	0.982	0.457	2e-93
255569108	421	conserved hypothetical protein [Ricinus	0.957	0.964	0.448	4e-93
224072787	406	predicted protein [Populus trichocarpa]	0.952	0.995	0.453	9e-93

>gi|224143104|ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1| predicted protein [Populus trichocarpa]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/415 (53%), Positives = 297/415 (71%), Gaps = 8/415 (1%)

Query: 5   LQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYL 64
           ++ +L+ L  L S CCIY VP+RL  +NEKAYTPQ+VSIGPLHHGK  L+ ME+HK+RYL
Sbjct: 1   MRGELDSLPVLSSKCCIYTVPKRLHHLNEKAYTPQLVSIGPLHHGKPELRPMEEHKKRYL 60

Query: 65  RYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHF 124
           + FLQR  +S  ++++ I+  E +LR  YAE IE SSD+F++MIL+DA FIIE+LLRYHF
Sbjct: 61  QDFLQRTKLSLVDYLKVIEKNEKKLRDCYAETIEFSSDEFIKMILVDAAFIIEVLLRYHF 120

Query: 125 R--QPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPE-QHENPTII 181
           +  + +K++D +++KP+ I+DI  DMWLLENQLPFFILEDLF  A I +P   ++  +I 
Sbjct: 121 KPMRKEKENDRVYNKPWAIQDIRKDMWLLENQLPFFILEDLFDPARITLPSGSNQMLSIT 180

Query: 182 TVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTV 241
            + YE+ K L  ++    K       +V+H +DFL ICH P    Q K + +    G  +
Sbjct: 181 KLAYEFSKDLWDLEEMEEKSQKNKSPKVQHLVDFLWICHQPP---QSKSKKKLKTLG--I 235

Query: 242 PSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSEN 301
           PS T+LHQAGV+F L  S +LF I+FKN  L IP+L++   TE LFRNL+AFEQ H S+N
Sbjct: 236 PSATELHQAGVKFKLGSSKNLFDIKFKNGILEIPRLEIVGATELLFRNLLAFEQCHCSKN 295

Query: 302 YINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSG 361
           YINDYV +I+HLVNTAKDVELLV++GI+ENWL D E  S L + L + T ++ D FYFSG
Sbjct: 296 YINDYVIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSG 355

Query: 362 LCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQV 416
           L + LN +C++  +KW+A LKQ+YFN PW+ IS   AV LL+LT IQAVCS++ V
Sbjct: 356 LVEELNAYCRKPWHKWQATLKQHYFNNPWSIISFIAAVILLVLTTIQAVCSILSV 410

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544798|ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis] gi|223547368|gb|EEF48863.1| conserved hypothetical protein [Ricinus communis]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/411 (48%), Positives = 270/411 (65%), Gaps = 8/411 (1%)

Query: 8   KLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYF 67
           +LE L  L  +CCI+RVP+RLRQ+NEKAYTP+ VSIG LHHGK  L+ ME+HK+RYLR F
Sbjct: 6   ELEVLHSLSDDCCIHRVPKRLRQLNEKAYTPRAVSIGALHHGKQELKAMEEHKRRYLRDF 65

Query: 68  LQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQP 127
           L+ +  S ++ ++ IK  E  LR  Y+E I L+S+ FV+MILLDA FII +LL+   ++ 
Sbjct: 66  LEWSKASVEDCIKLIKDNEIRLRNCYSETIGLNSENFVKMILLDAAFIIMVLLKQCLKEF 125

Query: 128 QKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEY 187
           + K D IF KP +I D+ +D+ LLENQ+PFFIL+DLF L+     E HE  ++I +T+++
Sbjct: 126 RSKKDRIFSKPGMIGDVRFDILLLENQIPFFILDDLFKLST--NSEGHEELSMIVLTHKF 183

Query: 188 FKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDL 247
           F         +     +  +++EH +DFLR+C  P      K + ++  K   +PSVT+L
Sbjct: 184 FTDTFDSWVAKHILDEHDFSKIEHMVDFLRVCQQPP-----KLQNRKKLKKLIIPSVTEL 238

Query: 248 HQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSE-NYINDY 306
           HQAGV+F L  S  L  I+F    L +P L++   TE L RNL AFEQ      NY++DY
Sbjct: 239 HQAGVKFELGSSRKLLNIKFNRGILKVPSLQIDDNTEILLRNLQAFEQCLCDRGNYVSDY 298

Query: 307 VFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGL 366
           + L+  LV   KDV+LL QNGIIENWL + E  STL   L +   L+ D FYFS L + L
Sbjct: 299 ISLVSLLVKAPKDVDLLAQNGIIENWLVNSEGVSTLFQKLEQENLLIPDDFYFSSLVEEL 358

Query: 367 NDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVL 417
           N +CK    KW+A LKQ+YFNTPWA ISV  A  LLILTVIQ+VCS++QVL
Sbjct: 359 NSYCKNPWNKWKATLKQDYFNTPWAVISVIAAAILLILTVIQSVCSILQVL 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075744|ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|222842179|gb|EEE79726.1| predicted protein [Populus trichocarpa]

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 201/418 (48%), Positives = 269/418 (64%), Gaps = 20/418 (4%)

Query: 8   KLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYF 67
           +LE  +P    CCIY+VPERLR++NEKAYTP++VSIGP+HHG   L+ MEDHK+ YL+ F
Sbjct: 31  ELEISNPFSDTCCIYKVPERLRELNEKAYTPRLVSIGPIHHGNDKLKAMEDHKRMYLKEF 90

Query: 68  LQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQP 127
           + R  +S   F++ IK +E  LR  YAE    SS+ F++MIL+DA F+I LLL++ +   
Sbjct: 91  IARTKVSVKGFIELIKEKETRLRNCYAETNGFSSEYFIKMILMDAAFVIMLLLKWTYTDF 150

Query: 128 QKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEY 187
           +   D IF+ PY   D+  D+ LLENQLPFFILE+L  L+   I       T+I +T+ +
Sbjct: 151 RGSRDSIFYPPYKSVDVRVDICLLENQLPFFILEELCGLSP--IFGNSPKATLIGLTHWF 208

Query: 188 FK---GLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGK--TVP 242
           F    G  AV G  L    ++E  V+H +DFL I H P+       E QQY + +  T P
Sbjct: 209 FSYEWGSWAV-GEYLGGVDFSE--VKHLVDFLTIYHRPT-------EQQQYEELEVLTAP 258

Query: 243 SVTDLHQAGVRFSLSKSNDLFAIEF--KNSTLHIPKLKLQLETESLFRNLIAFEQRH-YS 299
           SV +LHQAGV+F LS S  L  I+F      L  P+L+L   TE + RN+ AFEQ H  +
Sbjct: 259 SVKELHQAGVKFVLSSSKHLLDIKFDRNKGRLEFPRLQLDDRTEIIIRNMQAFEQCHGLT 318

Query: 300 ENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYF 359
             Y+ DY+FL+   V+ +KDVE+LV+N IIENWLP  E    L  NL++  ++ +  F F
Sbjct: 319 HGYVGDYIFLMGLFVSASKDVEMLVENRIIENWLPSNEEVVQLFYNLNKQNSVWSGTFLF 378

Query: 360 SGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVL 417
            GL K LN  C+R   KW+ANLKQNYFNTPWA +SV GAV LLILTVIQ+VCS++QV+
Sbjct: 379 KGLIKDLNAFCERPWNKWKANLKQNYFNTPWAAVSVSGAVILLILTVIQSVCSILQVV 436

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098244|ref|XP_002334570.1| predicted protein [Populus trichocarpa] gi|222873184|gb|EEF10315.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (924), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 196/415 (47%), Positives = 275/415 (66%), Gaps = 12/415 (2%)

Query: 8   KLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYF 67
           KL  L P  SNC IYRVP+RLR++NEKAYTPQV+SIGPLHHGK  L+ ME+HK+ YLR F
Sbjct: 32  KLSILRPFSSNCSIYRVPKRLRELNEKAYTPQVISIGPLHHGKEELKGMEEHKRLYLREF 91

Query: 68  LQRAIISFDEFVQFIKLREAELRGSYAEKIE-LSSDKFVEMILLDAGFIIELLLRYHFRQ 126
           L+ + ++  +F+  I  REA LR  YAE  + LS+++FVEM+LLD  F+I  LL+  F  
Sbjct: 92  LELSDVNVKDFIAAIAEREARLRNCYAETFDNLSAEEFVEMVLLDCSFLIMFLLKRWFSD 151

Query: 127 PQKKD-DHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTY 185
            +  + D IF+KP++ ++I +D+ LLENQLPFFI+EDLF L+  +I    +  ++I +T+
Sbjct: 152 IRGSNTDRIFNKPWMGQEIRFDLLLLENQLPFFIVEDLFKLS--KILHHRKEYSMIKLTH 209

Query: 186 EYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVT 245
           +                    +  EHF+DFLRIC  P+ + + K+ G       TVPSV 
Sbjct: 210 DLLLSSWDSWVPEDILQKINLSVGEHFVDFLRICQKPAEQMEPKKLGTL-----TVPSVA 264

Query: 246 DLHQAGVRFSLSKSNDLFAIEFKNS--TLHIPKLKLQLETESLFRNLIAFEQRHYSEN-Y 302
           +LH+AG++F L  S +L  I+F ++  TL IP+L++   TE LFRNL AFEQ +Y+ N Y
Sbjct: 265 ELHRAGIKFKLGSSINLLHIKFDDNEGTLEIPQLRILDHTEILFRNLQAFEQCNYAANKY 324

Query: 303 INDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGL 362
           + +Y+ ++  LV  AKDVE+LV+ GIIENWL D +A S L+ NLS+   +  + FYFSGL
Sbjct: 325 VCNYITMLSLLVPDAKDVEILVKKGIIENWLHDNDAVSRLVRNLSKENVINVNNFYFSGL 384

Query: 363 CKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVL 417
            + LN + ++  +KW+A LKQNYF  PW  ISV  A  L+ L++IQ VCS+IQVL
Sbjct: 385 VEDLNKYYRKRRHKWKAFLKQNYFRNPWTIISVVAAAVLVTLSIIQTVCSIIQVL 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072799|ref|XP_002303887.1| predicted protein [Populus trichocarpa] gi|224098234|ref|XP_002334569.1| predicted protein [Populus trichocarpa] gi|222841319|gb|EEE78866.1| predicted protein [Populus trichocarpa] gi|222873183|gb|EEF10314.1| predicted protein [Populus trichocarpa]

 Score =  356 bits (914), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 194/417 (46%), Positives = 265/417 (63%), Gaps = 15/417 (3%)

Query: 6   QVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLR 65
           Q+K++K   L   CCIYRVPERLR++NEKAYTP+VVSIGP+HHGK NL+ MEDHK  YL+
Sbjct: 21  QLKIKKAFSLA--CCIYRVPERLRKLNEKAYTPRVVSIGPIHHGKENLKAMEDHKIMYLQ 78

Query: 66  YFL-QRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHF 124
            FL Q  ++S ++ +  IK  E ELR SYAE I L    FV MILLDA FII +LL   +
Sbjct: 79  QFLEQNLLVSVEDLINIIKENETELRDSYAETINLGRKDFVTMILLDAVFIIMVLLNIKY 138

Query: 125 RQ---PQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTII 181
                  ++ DHIF++P+   D+ +DM LLENQLPFFIL+ L  L++  +    EN T+I
Sbjct: 139 LSGFYESRRSDHIFYRPFKFADVLFDMSLLENQLPFFILQKLLELSS--VAANPENCTLI 196

Query: 182 TVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTV 241
            ++    KG  +       +     +RV HF+DFL  C  P+ +++  +E        + 
Sbjct: 197 ELSCGLLKGQWSDWVKEDSWKIIDSSRVLHFVDFLSKCQQPTEKHRPAKE----EAFLSA 252

Query: 242 PSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYS-- 299
           P+ T+LHQ+GV+F  ++ + LF I F N  L IP+LK+    E LFRNL AFEQ H++  
Sbjct: 253 PTATELHQSGVKFKNTERSSLFDITFSNGILEIPQLKIYDVIEILFRNLQAFEQCHHANG 312

Query: 300 ENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYF 359
           + ++NDY+  I  LV+  KDVE+L  N  ++N L   EA S L +NL     + ++ F  
Sbjct: 313 DTFVNDYITFISCLVSATKDVEVLAHNENMKNMLSSDEAVSNLFHNLFIENVISSESF-L 371

Query: 360 SGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQV 416
           SGLC+ LN HC++  YKW+A LKQ YFN PW GISV  A FLL+LTVIQ VCS++Q+
Sbjct: 372 SGLCEELNLHCRKRRYKWKATLKQVYFNNPWTGISVVAATFLLVLTVIQTVCSILQL 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075748|ref|XP_002304749.1| predicted protein [Populus trichocarpa] gi|222842181|gb|EEE79728.1| predicted protein [Populus trichocarpa]

 Score =  353 bits (905), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/421 (46%), Positives = 269/421 (63%), Gaps = 15/421 (3%)

Query: 1   MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHK 60
           + + ++ +LE        CCIY+VPE+LR++NEKAYTP++VSIGP+HH K  L+ MEDHK
Sbjct: 25  LAKSVKAELEISYAFSDTCCIYKVPEQLREVNEKAYTPRLVSIGPIHHAKEKLKAMEDHK 84

Query: 61  QRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLL 120
           + YL+ FL R+ +S + F++FIK  E  LR  YAE IE +S+ F++MIL+DA F+I  LL
Sbjct: 85  RMYLKEFLARSEVSVEGFIEFIKENETRLRNCYAETIEFNSEYFIKMILMDAAFVIMFLL 144

Query: 121 RYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTI 180
           +   +      D IF+ P+   D+  D+ LLENQLPFFILE+L  L+   I      PT+
Sbjct: 145 KCKNKDFSGSRDSIFYPPHKSVDVRVDICLLENQLPFFILEELCGLST--ILGNSPKPTL 202

Query: 181 ITVTYEYFK---GLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRK 237
           I +T+ +F    G  AV G       ++E  V+H +DFL I   P  + Q ++      +
Sbjct: 203 IELTHGFFSKEWGSWAV-GEYWGKIDFSE--VKHLVDFLTIYQQPPQQQQNEE-----LE 254

Query: 238 GKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNST--LHIPKLKLQLETESLFRNLIAFEQ 295
             T PSV +LHQAGV+F LS S +L  I+F  +   L IP+L+L   TE + RN+ AFEQ
Sbjct: 255 VLTAPSVKELHQAGVKFVLSSSKNLLDIKFDRNKGRLEIPRLQLDDSTEIIIRNMQAFEQ 314

Query: 296 RHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLAD 355
            H    Y+ DY+FL+   V+ +KDVE+LV+N IIENWLP  E    L  NL++  ++   
Sbjct: 315 CHGLYGYVGDYIFLMGLFVSASKDVEMLVENRIIENWLPSNEEVVQLFYNLNKQNSVRGR 374

Query: 356 RFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQ 415
            F F GL K LN  C++   KW+ANLKQNYFNTPWA ISV GAV LLILTV+Q+VCS++Q
Sbjct: 375 FFLFKGLIKDLNAFCEKPWNKWKANLKQNYFNTPWAAISVSGAVILLILTVLQSVCSILQ 434

Query: 416 V 416
           V
Sbjct: 435 V 435

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548976|ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis] gi|223545488|gb|EEF46993.1| conserved hypothetical protein [Ricinus communis]

 Score =  352 bits (903), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 184/413 (44%), Positives = 264/413 (63%), Gaps = 7/413 (1%)

Query: 5   LQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYL 64
           ++ +LE LSP+ S  CIYRVP+R+R +N  AYTP++VSIGP HHGK  L+ ME+HK R+L
Sbjct: 27  MKSRLENLSPVSSERCIYRVPKRIRDVNHNAYTPRLVSIGPFHHGKPGLKAMEEHKWRHL 86

Query: 65  RYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHF 124
           + FL++  +  D+ V+FIK RE   R  YAE I L+SD+FV+++++DA F I++LL    
Sbjct: 87  QNFLRQTRVKLDDLVKFIKDREERARNCYAETIALTSDEFVQILIVDATFTIDILLGKVI 146

Query: 125 RQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALA-AIEIPEQHENPTIITV 183
            Q     + ++ +  L+ DI+ DM L+ENQLP+FIL D+   A +I      + P+I+ +
Sbjct: 147 PQLTCAIECVYDRSSLMFDIYRDMLLIENQLPYFILGDILDFAKSIAASGSSQWPSILEL 206

Query: 184 TYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPS 243
           T  YF     +Q  R   P    + V HF+DFLR+CH P    Q  +E    RK +   S
Sbjct: 207 TRVYFNSY--MQLGRASHP-MRRSEVNHFVDFLRLCHQPIKPRQTPREN---RKFEMTRS 260

Query: 244 VTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYI 303
            T+L +AGV+F ++ +  L  I+F +  L IP +++   TE+ FRNLIAFEQ H   +YI
Sbjct: 261 STELREAGVKFKVASTTHLLDIQFNDGVLEIPYIRVSEITEAFFRNLIAFEQCHCHTSYI 320

Query: 304 NDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLC 363
           +DY+ ++  L+NT  DVE+LV+ GI++  L +   ASTL NNL++     +  FY+S LC
Sbjct: 321 SDYIVIMDSLINTPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEILYDSHVFYYSLLC 380

Query: 364 KGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQV 416
           + LN  CK   ++W+A LK NYFNTPW  ISV   V LL+LT IQAVCS+IQV
Sbjct: 381 EDLNTFCKVRWHRWKATLKHNYFNTPWTAISVIAGVILLVLTFIQAVCSIIQV 433

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053370|ref|XP_002297786.1| predicted protein [Populus trichocarpa] gi|222845044|gb|EEE82591.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 192/420 (45%), Positives = 264/420 (62%), Gaps = 22/420 (5%)

Query: 5   LQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYL 64
           +Q +  KL P    C IYRVP+RL ++N +AYTPQVVSIGPLHHGK  LQ ME+HK+ YL
Sbjct: 1   MQEEFNKLRPFSDECSIYRVPKRLLKLNRRAYTPQVVSIGPLHHGKKELQEMEEHKKMYL 60

Query: 65  RYFLQRAIISFDEFVQFIKLREAELRGSYAEKIE-LSSDKFVEMILLDAGFIIELLLRYH 123
           + FL+ + +S ++F+ FI  +E  LR  YA   E LSS+KFV+M+LLD  F+I +LLR  
Sbjct: 61  QDFLKFSEVSLEDFIAFIAEKETRLRNCYAATFEKLSSEKFVKMMLLDCAFVIMVLLRAW 120

Query: 124 FRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITV 183
           +     ++D IF KP++I D+  DM LLENQLPFFIL+DL  L+    P      T + +
Sbjct: 121 YGNNGCRNDRIFSKPWMISDVSKDMCLLENQLPFFILDDLIKLSKKRDPISLIGLTFVFL 180

Query: 184 TYEYF----KGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGK 239
           T  +     + LE ++        + +A  EHF+ FLRIC  P+ + Q+K+         
Sbjct: 181 TRRWPEWVPQDLEEIE--------FCDA--EHFVAFLRICQQPTEQKQQKKID-----TI 225

Query: 240 TVPSVTDLHQAGVRFSLSKSNDLFAIEFK--NSTLHIPKLKLQLETESLFRNLIAFEQRH 297
           + PS  DLHQAGVRF L  S  L  I+F     TL IP LK+  +TE+LFRN+ AFEQ H
Sbjct: 226 STPSAMDLHQAGVRFKLGSSKKLLDIKFDADKGTLEIPCLKIVDDTETLFRNVQAFEQCH 285

Query: 298 YSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRF 357
               +I +Y+ +I+ +V  +KD E+L + GI ENWL D +A  +L++NLS+   +    F
Sbjct: 286 SDSGFIGNYITMINLVVQASKDTEILARKGITENWLRDNDALLSLLHNLSKENIVDRHDF 345

Query: 358 YFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVL 417
           YFS + + LN +  R  +KW+A LKQ YF+ PW  ISV  A  LL+LTVIQAVCS+IQV+
Sbjct: 346 YFSDVVEHLNKYYSRRRHKWKAALKQKYFDNPWTIISVIAAGILLLLTVIQAVCSIIQVV 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569108|ref|XP_002525523.1| conserved hypothetical protein [Ricinus communis] gi|223535202|gb|EEF36881.1| conserved hypothetical protein [Ricinus communis]

 Score =  348 bits (892), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 188/419 (44%), Positives = 269/419 (64%), Gaps = 13/419 (3%)

Query: 1   MEECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHK 60
           + + ++ +L  L PL   CCIY+VPER R++N +AYTP+ VS+GPLHHGK  L+ ME+HK
Sbjct: 12  LAKSVRQELGVLGPLSDKCCIYKVPERSRKLNPEAYTPRAVSVGPLHHGKQELRVMEEHK 71

Query: 61  QRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLL 120
           +RYL  FLQ +  S ++F+  I  +E  LR  YAE I  SS +FV+MIL+DA F++  LL
Sbjct: 72  RRYLFDFLQWSDSSLEDFITCIGKQETRLRNCYAETIVFSSQEFVKMILIDATFLVTFLL 131

Query: 121 RYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTI 180
           + HF   + ++D I     +  DI  D+ LLENQ+PFFILEDLF L+ +    +  + ++
Sbjct: 132 KVHFAHLRSRNDRISRNDNMF-DISRDIILLENQVPFFILEDLFKLSNLAERVEGLSLSM 190

Query: 181 ITVTYEYFKGLEA--VQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKG 238
           I +T+ +F+G     V G+ L+   ++E  VEHFLDFLRIC  P      K +  +  + 
Sbjct: 191 IGLTHSFFQGRWGSWVTGDILEQQDFSE--VEHFLDFLRICQQPP-----KLKPPRKLEK 243

Query: 239 KTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHY 298
             +P+VT LH AGV+F LS S +  +I F    L IP  +++   E L RNL AFE+ H 
Sbjct: 244 IVLPTVTQLHDAGVKFELSPSQNKLSIAFDKGILKIPHFRIEDTVEVLLRNLQAFEECHC 303

Query: 299 S-ENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRF 357
           S E Y NDY+ +I  L+  AKDVE+L QNGIIENW+ + +A +TL   +     +  ++F
Sbjct: 304 SGEMYANDYIAMIGMLIKDAKDVEILDQNGIIENWIGNNQAVATLFARME--VAIRRNQF 361

Query: 358 YFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQV 416
           YF+   + LND+CK   +K + +L+Q+YFNTPWAGISV  A  LL+LTVIQ VCS+++V
Sbjct: 362 YFAATLQDLNDYCKNPWHKMKGSLRQDYFNTPWAGISVFAASILLVLTVIQTVCSILEV 420

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072787|ref|XP_002303881.1| predicted protein [Populus trichocarpa] gi|222841313|gb|EEE78860.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (889), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 186/410 (45%), Positives = 266/410 (64%), Gaps = 6/410 (1%)

Query: 9   LEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFL 68
           +E L      CCIYRVP RLR+ NEK +TPQVV++GPLHHGK  L+ ME+HK  YL+ FL
Sbjct: 1   MEMLHSFSDQCCIYRVPIRLRESNEKIFTPQVVNLGPLHHGKEELKAMEEHKILYLQVFL 60

Query: 69  QRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQ 128
           + +  + +E ++ ++ RE  LR  YAE I+L S+ FV+M+LLDA F I +LL+      +
Sbjct: 61  KWSTANMEEVIKVVEERETRLRNCYAETIDLGSEDFVKMMLLDASFTIMVLLKDCCEGFE 120

Query: 129 KKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAI-EIPEQHENPTIITVTYEY 187
             +D IF+KP+++ DI  DM L+ENQLPFFILEDLF  + I +     E  ++I + +++
Sbjct: 121 SSNDRIFNKPWMLSDISLDMCLIENQLPFFILEDLFKASNITKCSPAEEEYSVIELAHKF 180

Query: 188 FKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTVPSVTDL 247
           F+        +        + V HF+DF+R C  PS  ++  +E +       VPS+T+L
Sbjct: 181 FEKRWDSWLKKAILEEINSSEVAHFVDFIRKCQKPSESDKTDKELETI----NVPSITEL 236

Query: 248 HQAGVRF-SLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYINDY 306
            +AGV+F S  +   L  ++F    L +P LK+   TE LFRN+ AFEQ H  E YI +Y
Sbjct: 237 DEAGVKFSSFEQGKSLLDMKFDRGILEMPLLKIDDNTEILFRNIQAFEQCHCDEYYIANY 296

Query: 307 VFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGL 366
           + +I+ LV T KDVE+LV+NGIIENW+ D EA +TL++N+S+   L AD F F+ L + L
Sbjct: 297 ISMINFLVITPKDVEILVRNGIIENWIHDYEAVTTLLHNISKENALSADDFIFASLVEDL 356

Query: 367 NDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQV 416
           N +C+R   KW+A LKQ YF+TPWA IS+  A+ LLILT++Q VCS+IQ+
Sbjct: 357 NAYCRRRWNKWKATLKQEYFHTPWAIISLIAALVLLILTMVQTVCSLIQL 406

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	424
TAIR|locus:2116667	680	AT4G31980 "AT4G31980" [Arabido	0.941	0.586	0.402	1.5e-74
TAIR|locus:2148042	353	AT5G11290 "AT5G11290" [Arabido	0.825	0.991	0.347	6.1e-55
TAIR|locus:2083138	503	AT3G50160 "AT3G50160" [Arabido	0.931	0.785	0.348	3e-53
TAIR|locus:2083078	531	AT3G50120 "AT3G50120" [Arabido	0.518	0.414	0.350	4.3e-53
TAIR|locus:2074755	541	AT3G50170 "AT3G50170" [Arabido	0.443	0.347	0.386	4.5e-53
TAIR|locus:2044918	448	AT2G36430 "AT2G36430" [Arabido	0.924	0.875	0.306	3.5e-52
TAIR|locus:2103401	540	AT3G60470 [Arabidopsis thalian	0.469	0.368	0.311	3.5e-50
TAIR|locus:2171127	440	AT5G22540 "AT5G22540" [Arabido	0.962	0.927	0.293	1.5e-49
TAIR|locus:2083093	564	AT3G50130 [Arabidopsis thalian	0.436	0.328	0.365	9.7e-49
TAIR|locus:2075671	476	AT3G47200 "AT3G47200" [Arabido	0.931	0.829	0.299	1.2e-47

TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 167/415 (40%), Positives = 250/415 (60%)

Query:     3 ECLQVKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQR 62
             + ++ KL  LS L + CCIY+VP +LR++N  AYTP++VS GPLH GK  LQ MED K R
Sbjct:   277 DSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQKYR 336

Query:    63 YLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRY 122
             YL  F+ R   S ++ V+  +  E   R  YAE ++L SD+FVEM+++D  F++ELLLR 
Sbjct:   337 YLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLLRS 396

Query:   123 HFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIIT 182
             H+ + + ++D IF    +I D+  DM L+ENQLPFF+++++F L       Q   P+II 
Sbjct:   397 HYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLLLNYY--QQGTPSIIQ 454

Query:   183 VTYEYFKG-LEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKTV 241
             +   +F   L  +     KF   TE   EHF+D LR C+LP      K E     K    
Sbjct:   455 LAQRHFSYFLSRIDDE--KF--ITEP--EHFVDLLRSCYLPQF--PIKLEYTTV-KVDNA 505

Query:   242 PSVTDLHQAGVRFSLSKSND-LFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQ-RHYS 299
             P  T+LH AGVRF  ++++  L  I F +  L IP + +   TESL++N+I FEQ R  +
Sbjct:   506 PEATELHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCRCSN 565

Query:   300 ENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYF 359
             +N++ DY+ L+   + +  D +LL+ +GII N+L +    S L N++S+   +   RFYF
Sbjct:   566 KNFL-DYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSVDVSNLFNSISK-EVIYDRRFYF 623

Query:   360 SGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVI 414
             S L + L  +C     +W+A L+++YF+ PWA  SV  A+ LL+LT IQ+VCS++
Sbjct:   624 SMLSENLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSIL 678

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2148042 AT5G11290 "AT5G11290" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 125/360 (34%), Positives = 201/360 (55%)

Query:    56 MEDHKQRYLRYFLQRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFI 115
             MEDHK RYL+ F+ R  +S ++ V+  +  E   R  Y E + LSSD++V+M+++DA F+
Sbjct:     1 MEDHKLRYLQSFIPRTALSLEDLVRVARTWEERARFCYTEDVRLSSDEYVKMLIVDASFL 60

Query:   116 IELLLRYHFRQPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQH 175
             +ELLLR  F   +   D I+ K  +I D+ +D+ LLENQLP+F++E +F L  + +    
Sbjct:    61 VELLLRSQFDVYRGMLDRIYGKQKMIVDVNHDVMLLENQLPYFVVEGMFGL--LHVDYHR 118

Query:   176 ENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQY 235
             E P +  + + +FK       +  +    +++++ HF+D LR  HLP   +     G   
Sbjct:   119 ELPPLTRIIHNHFKKFWMSIPSFSR--SISDSKICHFVDLLRSIHLPLVLSFP---GGSM 173

Query:   236 RKGKTVPSVTDLHQAGVRFSLSKSNDL-FAIEFKNSTLHIPKLKLQLETESLFRNLIAFE 294
             R   +V S  ++  AGV+   + +N     I F N  L IPK+K+   TESL+RN+I FE
Sbjct:   174 RMMDSVLSAKEIQNAGVKLQPADNNTCALDISFANGVLTIPKIKINDITESLYRNIILFE 233

Query:   295 QRHYSENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLA 354
             Q H  + Y   Y+  +   + +  D EL + +GII N   + E  S L N++ + T+   
Sbjct:   234 QCHRLDAYFIHYMRFLSCFIRSPMDAELFIDHGIIVNRFGNAEDVSRLFNSILKETSYSG 293

Query:   355 DRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVI 414
               FY+  +   L  HC     KW+A L+++YF+ PW+  SV  A  LL+LT +QA+CS++
Sbjct:   294 --FYYKTVYGNLQAHCNAPWNKWKATLRRDYFHNPWSAASVVAACVLLLLTFVQAICSIL 351

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 143/410 (34%), Positives = 211/410 (51%)

Query:    18 NCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFDE 77
             N CIYRVP  L++ + K+Y PQ+VSIGP HHG  +L  ME HK R +   + RA    + 
Sbjct:   103 NLCIYRVPPYLQENDTKSYMPQIVSIGPYHHGHKHLMPMERHKWRAVNMVMARAKHDIEM 162

Query:    78 FVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELL--LRYHFRQ-PQKKDDHI 134
             ++  +K  E + R  Y   I ++ ++F+EM++LD  FIIE+       F++     +D +
Sbjct:   163 YIDAMKELEEKARACYQGPINMNRNEFIEMLVLDGVFIIEIFKGTSEGFQEIGYAPNDPV 222

Query:   135 FHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAV 194
             F    L++ I  DM +LENQLP+ +L+ L  L   ++ ++      + +   +F+ L   
Sbjct:   223 FGMRGLMQSIRRDMVMLENQLPWSVLKGLLQLQRPDVLDKVN----VQLFQPFFQPLLPT 278

Query:   195 QGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQYRKGKT-VPSVTDLHQAGVR 253
             +         TE    H LD LR   L SS   ++      ++ +  +  VT+L  AGV 
Sbjct:   279 R------EVLTEEGGLHCLDVLRRGLLQSSGTSDEDMSMVNKQPQQLIHCVTELRNAGVE 332

Query:   254 FSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHY-SENYINDYVFLIHH 312
             F   ++   + IEFKN  L IPKL +   T+SLF NLIAFEQ H  S   I  Y+  + +
Sbjct:   333 FMRKETGHFWDIEFKNGYLKIPKLLIHDGTKSLFLNLIAFEQCHIKSSKKITSYIIFMDN 392

Query:   313 LVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKR 372
             L+N+++DV  L   GIIENWL      S L N L +      +  Y S L   +N + +R
Sbjct:   393 LINSSEDVSYLHHYGIIENWLGSDSEVSDLFNGLGKEVIFDPNDGYLSALTGEVNIYYRR 452

Query:   373 TCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPPKK 422
                  +A L+  YFN PWA  S   AV LLI T  Q+  +V     PP K
Sbjct:   453 KWNYLKATLRHKYFNNPWAYFSFIAAVTLLIFTFCQSFFAVFAYFKPPPK 502

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083078 AT3G50120 "AT3G50120" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
 Identities = 81/231 (35%), Positives = 118/231 (51%)

Query:   201 FPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQY----------RKGKTVPSVTDLHQA 250
             F P+ +    H LD  R   L SS   E +  ++           R+ + +  VT+L +A
Sbjct:   300 FDPFADMGELHCLDVFRRSLLRSSPKPEPRLTRKRWSRNTRVADKRRQQLIHCVTELKEA 359

Query:   251 GVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHY-SENYINDYVFL 309
             G++F   K++  + ++FKN  L IP+L +   T+SLF NLIAFEQ H  S N I  Y+  
Sbjct:   360 GIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSSNDITSYIIF 419

Query:   310 IHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDH 369
             + +L+++ +DV  L   GIIE+WL      + L N L +      +  Y S L   +N +
Sbjct:   420 MDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRY 479

Query:   370 CKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQVLSPP 420
                    WRA LK  YFN PWA +S C AV LL+LT  Q+  +V     PP
Sbjct:   480 YDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAYYKPP 530

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 4.5e-53, Sum P(2) = 4.5e-53
 Identities = 73/189 (38%), Positives = 103/189 (54%)

Query:   236 RKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQ 295
             R+ + V  VT+L +AGV+F   K++  + IEFKN  L IPKL +   T+SLF NLIAFEQ
Sbjct:   353 RQQQLVHCVTELREAGVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQ 412

Query:   296 RHY-SENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLA 354
              H  S N+I  Y+  + +L+N+++DV  L   GIIE+WL      + L N L +      
Sbjct:   413 CHIESSNHITSYIIFMDNLINSSEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDP 472

Query:   355 DRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVI 414
                + S L   +N +  R     +A L   YFN PWA  S   AV LL+LT+ Q+  +V 
Sbjct:   473 KDSHLSRLSGDVNRYYNRKWNVLKATLTHKYFNNPWAYFSFSAAVILLLLTLCQSFYAVY 532

Query:   415 QVLSPPKKI 423
                 P  K+
Sbjct:   533 AYYKPNSKL 541

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 124/405 (30%), Positives = 212/405 (52%)

Query:    19 CCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAI-ISFDE 77
             C I+RVP+ +   N + Y P+VVSIGP H G+  L+ +E+HK RYL   L R   ++ ++
Sbjct:    45 CSIFRVPQSMIDCNGRCYEPRVVSIGPYHRGQTQLKMIEEHKWRYLNVLLTRTQNLTLED 104

Query:    78 FVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHK 137
             +++ +K  E   R  Y+E I + S++F EM++LD  F++EL  + +   P + +D +   
Sbjct:   105 YMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLLELFRKVNNLVPFEPNDPLVAM 164

Query:   138 PYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGN 197
              +++   + D   LENQ+PFF+LE LF L   +  E   N ++ ++ + +F  +  +   
Sbjct:   165 AWVLPFFYRDFLCLENQIPFFVLETLFNLTRGD-NENETNASLQSLAFAFFNNM--MHRT 221

Query:   198 RLKFPPYTEARVEHFLDFLRICHLPSSRNQEK---QEGQQYRKGKTVPSVTDLHQAGVRF 254
                   + E R +H LD LR   +P S          G++      + S++ L +AG++ 
Sbjct:   222 EEDLARFKELRAKHLLDLLRSSFIPESELHTPPATNPGKEKMPSHIIHSISKLRRAGIKL 281

Query:   255 -SLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYS-ENYINDYVFLIHH 312
               L  +     + F++ T+ +P + +     S   N +A+EQ H +   +   Y  L+  
Sbjct:   282 RELKDAESFLVVRFRHGTIEMPAITVDDFMSSFLENCVAYEQCHVACSMHFTTYATLLDC 341

Query:   313 LVNTAKDVELLVQNGIIENWL-PDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCK 371
             L NT KDVE L    IIEN+   D E A   +N+L R       + Y   L + +N++ K
Sbjct:   342 LTNTYKDVEYLCDQNIIENYFGTDTELAK-FVNSLGRDVAFDITQCYLKDLFEEVNEYYK 400

Query:   372 RTCY-KWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVIQ 415
              + + +W A  K  YFN+PW+ +S   A+ LL+L+VIQ + +V Q
Sbjct:   401 SSWHVEW-ATFKFTYFNSPWSFVSALAALVLLVLSVIQTIYTVFQ 444

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2103401 AT3G60470 [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 3.5e-50, Sum P(3) = 3.5e-50
 Identities = 65/209 (31%), Positives = 109/209 (52%)

Query:   217 RICHLPSSRNQEKQEGQQYRKGKTVPSV------TDLHQAGVRFSLSKSNDLFAIEFKNS 270
             R+  L + R +E   G   +K K +P +        L  AGV+F          + F+N 
Sbjct:   332 RLERLKTHRMEETSHGHGSKKTKELPIIKHMYNAAKLQSAGVKFKAVTDEFSIDVTFENG 391

Query:   271 TLHIPKLKLQLETESLFRNLIAFEQRHYS-ENYINDYVFLIHHLVNTAKDVELLVQNGII 329
              L IP L +  + E   RN++A EQ HY  + Y+ ++V  +  L++T KDV+LL++NGI+
Sbjct:   392 CLKIPCLWVPDDAEITLRNIMALEQCHYPFKAYVCNFVSFLDFLIDTDKDVDLLMENGIL 451

Query:   330 ENWLPDKEAA-STLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNT 388
              NW      A + ++N L  G  ++  R Y++G+   +N + +    + R  L + YF  
Sbjct:   452 NNWGEKSSVAVAEMVNTLFSG--VVESRSYYAGIASRVNAYYENPVNRSRTILGRQYFGN 509

Query:   389 PWAGISVCGAVFLLILTVIQAVCSVIQVL 417
              W G +   A  LL++T+IQ V S++QV+
Sbjct:   510 LWRGTATVAAALLLVMTLIQTVASILQVM 538

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 126/429 (29%), Positives = 217/429 (50%)

Query:     7 VKLEKLSPLPSNCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRY 66
             +KL + S     CCI R+P+ L +IN KAY P++VSIGP HHGK +L+  + HK+R+L++
Sbjct:    19 LKLLRESAGSELCCIVRIPQSLARINLKAYEPKIVSIGPYHHGKEHLKMTQQHKRRFLKF 78

Query:    67 FL----QRAIISFDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRY 122
             F+    ++  +   E V+ +   E  +RGSY+E + L S+  V+M++LD  FI+ L    
Sbjct:    79 FVAKMEEKGFVP-QELVKAVSSLEGVIRGSYSEDLGLDSENLVQMMVLDGCFILTLFFVV 137

Query:   123 HFR-QPQKKDDHIFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTII 181
               + +    DD IF  P+++  I  D+ LLENQ+P+ +L+ LF  + + +     N    
Sbjct:   138 SGKVEYTNLDDPIFRMPWILPSIRADLLLLENQVPYVLLQTLFETSKL-VTCSGLNE--- 193

Query:   182 TVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLR--ICHLPSSR----NQEKQEGQQY 235
              + +E+F    ++Q     +  +     +H LD +R     +PS R    +  K     +
Sbjct:   194 -IAFEFFN--YSLQKPETFWEKHYGLEAKHLLDLIRKTFVPVPSQRRIKDHSSKSSFNDH 250

Query:   236 RKGKTVPSVTDLHQAGVRFSLSKSND-LFAIEFKNSTLHIPKLKLQLETESLFRNLIAFE 294
                  V S   LH  G++F   K+ D +  I + N  LHIP + +   T S+F N +AFE
Sbjct:   251 EYLGFVLSAKKLHLRGIKFKPRKNTDSILDISYSNGVLHIPPVVMDDFTASIFLNCVAFE 310

Query:   295 QRHY-SENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLL 353
             Q +  S N+I  YV  +  L+N   D   L +  I+EN+   ++  S     + +   L 
Sbjct:   311 QLYADSSNHITSYVAFMACLINEESDASFLSERRILENYFGTEDEVSRFYKRIGKDIALD 370

Query:   354 ADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSV 413
              ++ Y + + +G+N++  +  +   A     +F++PW   S   A+ LL+   +Q   + 
Sbjct:   371 LEKSYLAKVFEGVNEYTSQGFHVHCAEFIHTHFDSPWTFASSFAALLLLLFAALQVFFAA 430

Query:   414 IQVLSPPKK 422
                  PPK+
Sbjct:   431 YSYFRPPKE 439

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 9.7e-49, Sum P(2) = 9.7e-49
 Identities = 68/186 (36%), Positives = 102/186 (54%)

Query:   236 RKGKTVPSVTDLHQAGVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQ 295
             R+ + +  VT+L +AG++F   K++  + I FKN  L IPKL +   T+SLF NLIAFEQ
Sbjct:   378 RQQQLIHCVTELREAGIKFRTRKTDRFWDIRFKNGYLEIPKLLIHDGTKSLFSNLIAFEQ 437

Query:   296 RHY-SENYINDYVFLIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLA 354
              H  S N I  Y+  + +L+++++DV  L   GIIE+WL +    + L N L +      
Sbjct:   438 CHIDSSNDITSYIIFMDNLIDSSEDVRYLHYCGIIEHWLGNDYEVADLFNRLCQEVAFDP 497

Query:   355 DRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSVI 414
                Y S L   ++ +  R     +A LK  YFN PWA  S   A+ LL+LT+ Q+  +  
Sbjct:   498 QNSYLSQLSNKVDRNYSRKWNVLKAILKHKYFNNPWAYFSFFAALVLLVLTLFQSFFTAY 557

Query:   415 QVLSPP 420
                +PP
Sbjct:   558 PYFNPP 563

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075671 AT3G47200 "AT3G47200" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 128/428 (29%), Positives = 218/428 (50%)

Query:    18 NCCIYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAI---IS 74
             +CCI+RVPE    +N KAY P+VVSIGP H+G+ +LQ ++ HK R L+ FL  A    + 
Sbjct:    45 SCCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKDVE 104

Query:    75 FDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHI 134
              +  V+ +   E ++R SY+E+++   D  + M++LD  FI+ + L       +  +D I
Sbjct:   105 ENVLVKAVVDLEDKIRKSYSEELKTGHD-LMFMMVLDGCFILMVFLIMS-GNIELSEDPI 162

Query:   135 FHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAV 194
             F  P+L+  I  D+ LLENQ+PFF+L+ L+  + I +        +  + + +FK     
Sbjct:   163 FSIPWLLSSIQSDLLLLENQVPFFVLQTLYVGSKIGVSSD-----LNRIAFHFFKNPIDK 217

Query:   195 QGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQ----QYRKGKT--VPSVTD-- 246
             +G+   +  +   + +H LD +R   LP++   +K        Q  +GK+  VPSV    
Sbjct:   218 EGSY--WEKHRNYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPSVDSKA 275

Query:   247 ---------LHQAGVRFSL--SKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQ 295
                      L   G++F L  SK + +  +  K + L IP+L+      S F N +AFEQ
Sbjct:   276 VPLILSAKRLRLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQ 335

Query:   296 RHY-SENYINDYVFLIHHLVNTAKDVELLVQNG-IIENWLPDKEAASTLINNLSRGTTLL 353
              +  S N I  Y+  +  L+N  +DV  L  +  IIEN        S     +S+     
Sbjct:   336 FYTDSSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFE 395

Query:   354 ADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILTVIQAVCSV 413
              D  Y + + KG+N++ K+      A  +  +F +PW  +S C  +F+++LT++Q+  ++
Sbjct:   396 VDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAI 455

Query:   414 IQVLSPPK 421
             +  L+  K
Sbjct:   456 LSYLNDKK 463

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XVIII000126 hypothetical protein (410 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	424
pfam03140	387	pfam03140, DUF247, Plant protein of unknown functi	1e-131

>gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function

 Score =  383 bits (986), Expect = e-131
 Identities = 157/394 (39%), Positives = 220/394 (55%), Gaps = 16/394 (4%)

Query: 21  IYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAIISFD--EF 78
           IYRVP RLR +N +AY P+VVSIGP HHGK +L+ ME+HK RYL  FL R        + 
Sbjct: 1   IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60

Query: 79  VQFIKLREAELRGSYAEKI-ELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHIFHK 137
           +  ++  E E R  YAE +  +SS++FVEM+LLD  FI+EL LR        ++D +F +
Sbjct: 61  LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLR-LSEGIYGENDPLFAR 119

Query: 138 PYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQHENPTIITVTYEYFKGLEAVQGN 197
            +L+  I  D+ LLENQ+PFF+LE LF L       Q    ++  +   +F      +  
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELL---TGRQDVKTSLNDLALRFF---YDCESL 173

Query: 198 RLKFPPYTEARVEHFLDFLRICHLPSS----RNQEKQEGQQYRKGKTVPSVTDLHQAGVR 253
                   E+ V H LD LR   LPS+                  + +PS T+L +AGVR
Sbjct: 174 LPPDDLIEESNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREAGVR 233

Query: 254 FSLSK-SNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHY-SENYINDYVFLIH 311
           F   K ++ +  + FK   L IP+L +   TESL RNLIAFEQ H  S N++  YV  + 
Sbjct: 234 FKRRKTASCILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYVAFMD 293

Query: 312 HLVNTAKDVELLVQNGIIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCK 371
           +L+NTA+DV LL + GI+EN L   E  +   N L RG     D  Y SG+ + +N +C+
Sbjct: 294 NLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVNRYCR 353

Query: 372 RTCYKWRANLKQNYFNTPWAGISVCGAVFLLILT 405
               +W+A L++ YF+ PWA IS+  AV LL+LT
Sbjct: 354 SRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387

The function of the plant proteins constituting this family is unknown. Length = 387

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	424
PF03140	391	DUF247: Plant protein of unknown function; InterPr	100.0

>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown

Probab=100.00  E-value=3.3e-110  Score=853.81  Aligned_cols=378  Identities=43%  Similarity=0.744  Sum_probs=336.1

Q ss_pred             eeecCchhhhcCccCCcceEeeeccCCCCCcccchhHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHhccchhcc
Q 014434           21 IYRVPERLRQINEKAYTPQVVSIGPLHHGKANLQFMEDHKQRYLRYFLQRAI---ISFDEFVQFIKLREAELRGSYAEKI   97 (424)
Q Consensus        21 I~rVP~~lr~~n~~aY~P~~VSIGPyHhg~~~L~~mE~~K~~~~~~~l~r~~---~~l~~~~~~i~~~e~~~R~~Y~~~~   97 (424)
                      |||||+++|++|+++|+|++|||||||||+++|+.||++|++|++.|++|++   .++++++++|+++|++||+||++++
T Consensus         1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~   80 (391)
T PF03140_consen    1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI   80 (391)
T ss_pred             CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence            8999999999999999999999999999999999999999999999999999   7899999999999999999999999


Q ss_pred             C-CChHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCc-CCCCccchhhHhhhhhhhcccchHHHHHHHHHHhhhcCCCCC
Q 014434           98 E-LSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDH-IFHKPYLIEDIWYDMWLLENQLPFFILEDLFALAAIEIPEQH  175 (424)
Q Consensus        98 ~-~~~~ef~~MmllDGcFlLe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQiPffVL~~L~~~~~~~~~~~~  175 (424)
                      + +++++|++||++|||||||+|+++..  ..+.+|| ++..+|....|++||+|||||||||||++||++  ..+....
T Consensus        81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l--~~~~~~~  156 (391)
T PF03140_consen   81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFEL--LFGSKSD  156 (391)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHH--hcccccC
Confidence            7 99999999999999999999998876  2346788 888999999999999999999999999999999  5433334


Q ss_pred             CcchHHHHHHHhccCcccccCCCCCCCCCccccccchhHHHHHHhCCCCCCC-c-ccccc----cccCCccccCHHHHHH
Q 014434          176 ENPTIITVTYEYFKGLEAVQGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQ-E-KQEGQ----QYRKGKTVPSVTDLHQ  249 (424)
Q Consensus       176 ~~~~l~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~p~~~~~-~-~~~~~----~~~~~~~~~sAteL~~  249 (424)
                      ...++.+++.+||....+...+. ..  ....+++|||||+|++++|++... + +..+.    .......|||||||++
T Consensus       157 ~~~~l~~l~~~~~~~~~~~~~~~-~~--~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~~  233 (391)
T PF03140_consen  157 VDESLIDLVLKFFYKHWPSWPPD-EP--ISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELRE  233 (391)
T ss_pred             ccchHHHHHHhHhcccccccccc-cc--ccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHHh
Confidence            45789999999994322211111 11  112578999999999999932211 1 11110    0123568999999999


Q ss_pred             cCcEEEecCCC-CccceEEcCcEEeeceeEeccchhHHHHHHHHHHHhcCC-CcchhhHHHHHHHhhCChhhHHHHHHCC
Q 014434          250 AGVRFSLSKSN-DLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYS-ENYINDYVFLIHHLVNTAKDVELLVQNG  327 (424)
Q Consensus       250 aGVkfk~~~~~-~llDV~F~~G~L~IP~l~id~~T~~llrNLiA~Eq~~~~-~~~vtsYv~fM~~LI~t~eDV~lL~~~g  327 (424)
                      |||+||++++. +++||+|++|+|+||+|.||++|+++||||||||||++. +.+|||||.||++||+|++||++|+++|
T Consensus       234 aGV~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~~kg  313 (391)
T PF03140_consen  234 AGVKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLRRKG  313 (391)
T ss_pred             CCcEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHHhCC
Confidence            99999999876 699999999999999999999999999999999999988 8999999999999999999999999999


Q ss_pred             ceeccCCChHHHHHHHHhhccCcccCCCCccHHHHHHHHHHHccCchhhhhhhhcccccccccHHHHHHHHHHHHHHH
Q 014434          328 IIENWLPDKEAASTLINNLSRGTTLLADRFYFSGLCKGLNDHCKRTCYKWRANLKQNYFNTPWAGISVCGAVFLLILT  405 (424)
Q Consensus       328 Ii~~~lg~deeva~lFn~L~~~~~~~~~~~y~~~v~~~l~~y~~~r~~~w~a~l~~~yf~npw~~is~~aA~~ll~lt  405 (424)
                      ||+|++|+||||++|||+||++++.+.+.+||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|++|
T Consensus       314 Ii~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~lT  391 (391)
T PF03140_consen  314 IIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLLT  391 (391)
T ss_pred             eEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999887789999999999999999999999999999999999999999999999997

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	424
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.3 bits (140), Expect = 3e-09
 Identities = 69/447 (15%), Positives = 140/447 (31%), Gaps = 138/447 (30%)

Query: 21  IYRVPERLRQINEKAY----TPQVVSIGPLHHGKANL--QFMEDHKQRYLRYFLQRAIIS 74
           + R  +   ++ +          V+  G L  GK  +       +K       +Q     
Sbjct: 131 VSR-LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK-------VQCK--- 179

Query: 75  FDEFVQFIKLREAELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKDDHI 134
            D  + ++ L+      +  E ++    +        +     + LR H  Q + +   +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR-LL 238

Query: 135 FHKPY----LI-EDIWYDMWLLENQLPFF-----IL------------------------ 160
             KPY    L+  ++  +          F     IL                        
Sbjct: 239 KSKPYENCLLVLLNVQ-NAKAWNA----FNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 161 ----------EDLFA----LAAIEIPEQ--HENPTIITV----------TYEYFKGLEAV 194
                     + L          ++P +    NP  +++          T++ +K     
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK----- 348

Query: 195 QGNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEKQEGQQY-------RKGKTVPSVT-- 245
               +     T   +E  L+ L           E  E ++             +P++   
Sbjct: 349 ---HVNCDKLTTI-IESSLNVL-----------EPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 246 ----DLHQAGVRFSLSKSNDLFAIE--FKNSTLHIP----KLKLQLETE-SLFRNLI--- 291
               D+ ++ V   ++K +    +E   K ST+ IP    +LK++LE E +L R+++   
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453

Query: 292 ----AFEQRHYSENYINDYVF--LIHHLVNTAKDVELLVQNGIIEN--WLPDK-EAASTL 342
                F+       Y++ Y +  + HHL N      + +   +  +  +L  K    ST 
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 343 INNLSRGTTLLAD-RFYFSGLCKGLND 368
            N        L   +FY   +C   ND
Sbjct: 514 WNASGSILNTLQQLKFYKPYICD--ND 538

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 8e-08
 Identities = 51/300 (17%), Positives = 99/300 (33%), Gaps = 62/300 (20%)

Query: 87  AELRGSYAEKIELSSDKFVEMILLDAGFIIELLLRYHFRQPQKKD--DHIFHKPYLIEDI 144
            E +  Y + + +  D FV+    D   + ++      +    K+  DHI      +   
Sbjct: 12  GEHQYQYKDILSVFEDAFVDN--FDCKDVQDMP-----KSILSKEEIDHIIMSKDAVSGT 64

Query: 145 WYDMWLL----ENQLPFFILEDL-----FALAAIEIPEQHENPTIITVTYEYFKGLEAVQ 195
               W L    E  +  F+ E L     F ++ I+   +   P+++T  Y   +  + + 
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK--TEQRQPSMMTRMYIEQR--DRLY 120

Query: 196 GNRLKFPPYTEARVEHFLDFLRICHLPSSRNQEK-----QEGQQYRKGKTVPSVTDLHQA 250
            +   F  Y  +R++ +L  LR   L   R  +        G     GKT  ++      
Sbjct: 121 NDNQVFAKYNVSRLQPYLK-LRQA-LLELRPAKNVLIDGVLGS----GKTWVALDVCLSY 174

Query: 251 GVRFSLSKSNDLFAIEFKNSTLHIPKLKLQLETESLFRNLIAFEQRHYSENYIN--DYVF 308
            V+        +F +  KN              E++   L          N+ +  D+  
Sbjct: 175 KVQ--CKMDFKIFWLNLKNCN----------SPETVLEMLQKL-LYQIDPNWTSRSDHSS 221

Query: 309 LIHHLVNTAKDVELLVQNGIIENWLPDKEAASTLI--NNLSRGTTLLADRFYFSGLCKGL 366
            I   +++ +          +   L  K   + L+   N+       A    F+  CK L
Sbjct: 222 NIKLRIHSIQAE--------LRRLLKSKPYENCLLVLLNVQNAKAWNA----FNLSCKIL 269

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00