Citrus Sinensis ID: 015095

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccEEEccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccEEcccHHHHHcHHcccccEEEcccccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHcccccccccEEEEccccccccccccHHHHHHHHHHccccEEEEEEccccccHHHHccccccccccccccccccHHHHHHHHHHHHcc
ccccEEHHHccccccccccccccHHHHHHHHHHHccccccEEEEEEEEEcccccccccccccHHHHHcccccHcccHHHHHHcccccccccccccccccEEEcccEEcccccHHHHEEcccccccccHHcccccccEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEccHHHHHcHHccccEEEccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHcccEEEEEEccccHHHHcccccccccccccccHHHcHHHHHHHHHHHHHcc
mdhsissrslsrspspsispfnskrmilnpvfhkfnfdsrnfeikplvsrqnrpVVVAVRSsnqkvhndgfvledvphltnflpdlpsypnplkksqaYAVVKQtfvspedavaqniviqkdsprgvhfrragprekvyfksDEVRACIVtcgglcpginTVIREIVCGLSYmygvdeilgieggyrgfyskntltlspkvVNDIHkrggtilrtsrgghdtnkivdniedrginqvyiiggdgtQKGAALIYKEVEKRGLQVavagipktidndiavIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLAsrdvdcclipespfylegpgglFEFIERQLKENGHMVIVVAEgagqefvaqsmpavdekdasgNRLLLDIGLWLTQKIKIQHT
mdhsissrslsrspspsispfnskrMILNPVFHKFNFDSRNFEikplvsrqnrpVVVAVRssnqkvhndgFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAqniviqkdsprgvhfrragprekvyfksdeVRACIVtcgglcpginTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRggtilrtsrgghdtnkivDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAvagipktidndIAVIDKSFGFDTAVEEAQRAINaahvevesvengVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIglwltqkikiqht
MDHsissrslsrspspsispFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT
*************************MILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQ***********GNRLLLDIGLWLTQKIK****
********************************************************************DGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFV**************NRLLLDIGLWLTQKIKIQ**
******************SPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT
*********LSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAxxxxxxxxxxxxxxxxxxxxxVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
Q9FKG3 530 6-phosphofructokinase 4, yes no 0.987 0.769 0.753 1e-178
Q94AA4 489 6-phosphofructokinase 3 O no no 0.852 0.719 0.754 1e-162
Q9M076 462 6-phosphofructokinase 6 O no no 0.815 0.729 0.761 1e-159
Q9C5J7 485 6-phosphofructokinase 7 O no no 0.845 0.719 0.744 1e-158
Q9M0F9 473 6-phosphofructokinase 1 O no no 0.823 0.718 0.739 1e-154
Q9FIK0444 6-phosphofructokinase 2 O no no 0.772 0.718 0.554 1e-102
Q8VYN6537 6-phosphofructokinase 5, no no 0.668 0.513 0.551 2e-84
Q59126341 Pyrophosphate--fructose 6 N/A no 0.602 0.730 0.376 5e-33
Q9AGC0341 Pyrophosphate--fructose 6 yes no 0.602 0.730 0.365 4e-32
B9LHK4356 6-phosphofructokinase OS= yes no 0.532 0.617 0.369 2e-30
>sp|Q9FKG3|K6PF4_ARATH 6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1 Back     alignment and function desciption
 Score =  626 bits (1614), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/409 (75%), Positives = 345/409 (84%), Gaps = 1/409 (0%)

Query: 6   SSRSLSRSPSPSISPFN-SKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQ 64
           +S S   S  P+IS FN S  ++    F       +   + P +  Q R +        +
Sbjct: 3   ASISFLGSTKPNISLFNPSSNVLPRRDFPLPALKLKKVSVLPRILHQKRLIRAQCSDGFK 62

Query: 65  KVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSP 124
              +DGFVLEDVPHLT FLPDLPSYPNPLK+SQAYA+VK+TFVS ED VAQNIV+QK S 
Sbjct: 63  PEEDDGFVLEDVPHLTKFLPDLPSYPNPLKESQAYAIVKRTFVSSEDVVAQNIVVQKGSK 122

Query: 125 RGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEG 184
           RGVHFRRAGPRE+VYF+SDEV+ACIVTCGGLCPGINTVIREIVCGL+ MYGV+ ILGI+G
Sbjct: 123 RGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGINTVIREIVCGLNNMYGVNNILGIQG 182

Query: 185 GYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDG 244
           GYRGFYSKNT+ L+PKVVNDIHKRGGT L+TSRGGHDT KIVDNI+DRGINQVYIIGG G
Sbjct: 183 GYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGGHDTAKIVDNIQDRGINQVYIIGGGG 242

Query: 245 TQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE 304
           TQKGA  IY+EVE+RGLQVAV+GIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE
Sbjct: 243 TQKGAEKIYEEVERRGLQVAVSGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE 302

Query: 305 SVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENG 364
           SVENGVGIVKLMGRYSGFI+M ATLA+RDVDCCLIPESPF+LEG GGLFEFIE +LKEN 
Sbjct: 303 SVENGVGIVKLMGRYSGFIAMIATLANRDVDCCLIPESPFFLEGKGGLFEFIEERLKENR 362

Query: 365 HMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT 413
           HMVIV+AEGAGQ++VAQSM A + KDASGNRLLLD+GLWLTQ+IK   T
Sbjct: 363 HMVIVIAEGAGQDYVAQSMRASETKDASGNRLLLDVGLWLTQQIKDHFT 411

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1
>sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 Back     alignment and function description
>sp|Q9M076|K6PF6_ARATH 6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0F9|K6PF1_ARATH 6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYN6|K6PF5_ARATH 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1 Back     alignment and function description
>sp|Q59126|PFP_AMYME Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis methanolica GN=pfp PE=1 SV=2 Back     alignment and function description
>sp|Q9AGC0|PFP_AMYMD Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis mediterranei GN=pfp PE=3 SV=1 Back     alignment and function description
>sp|B9LHK4|K6PF_CHLSY 6-phosphofructokinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pfkA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
359490072 533 PREDICTED: 6-phosphofructokinase 4, chlo 0.987 0.765 0.787 0.0
224112817443 predicted protein [Populus trichocarpa] 0.832 0.776 0.883 0.0
255539891 522 phosphofructokinase, putative [Ricinus c 0.912 0.722 0.802 1e-180
356535482 522 PREDICTED: 6-phosphofructokinase 4, chlo 0.975 0.772 0.764 1e-180
357442761 543 6-phosphofructokinase [Medicago truncatu 0.905 0.688 0.815 1e-177
449458333 529 PREDICTED: 6-phosphofructokinase 4, chlo 0.874 0.682 0.811 1e-177
79331832 529 6-phosphofructokinase 4 [Arabidopsis tha 0.987 0.771 0.753 1e-177
22328001 530 6-phosphofructokinase 4 [Arabidopsis tha 0.987 0.769 0.753 1e-177
297793715 530 phosphofructokinase family protein [Arab 0.927 0.722 0.778 1e-176
358346077 551 6-phosphofructokinase [Medicago truncatu 0.905 0.678 0.798 1e-175
>gi|359490072|ref|XP_002282309.2| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Vitis vinifera] gi|297745021|emb|CBI38613.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/419 (78%), Positives = 363/419 (86%), Gaps = 11/419 (2%)

Query: 1   MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVR 60
           MD S+SS   +RS  P   P  S  +     F  ++F SRNF + PL+SRQNR +  A  
Sbjct: 1   MDLSLSS--FARSSIPP--PLKSCNLTSLSNFPNYSFKSRNFSLTPLISRQNRRIR-AQY 55

Query: 61  SSNQKVHNDG------FVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVA 114
           S N      G      FV+++VPHLTNFLPDLPSYPNPL+++ AY +VK+ FVSPED VA
Sbjct: 56  SCNSGSGGGGGGDDDGFVVDEVPHLTNFLPDLPSYPNPLQQNLAYTIVKKNFVSPEDVVA 115

Query: 115 QNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMY 174
           Q IV+QK SPRGVHFRRAGPREKVYFKS+EVRACIVTCGGLCPGINTVIREIVCGL+YMY
Sbjct: 116 QKIVVQKGSPRGVHFRRAGPREKVYFKSEEVRACIVTCGGLCPGINTVIREIVCGLNYMY 175

Query: 175 GVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGI 234
           GV +ILGIEGGYRGFYSKNT+ L+PKVVNDIHKRGGT LRTSRGGHDT+KIVDNI+DRGI
Sbjct: 176 GVHDILGIEGGYRGFYSKNTIQLTPKVVNDIHKRGGTFLRTSRGGHDTDKIVDNIQDRGI 235

Query: 235 NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR 294
           NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR
Sbjct: 236 NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR 295

Query: 295 AINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFE 354
           AINAAHVEVESVENGVGIVKLMGRYSGFI+M+ATLASRDVDCCLIPESPFYLEG GGLFE
Sbjct: 296 AINAAHVEVESVENGVGIVKLMGRYSGFIAMFATLASRDVDCCLIPESPFYLEGQGGLFE 355

Query: 355 FIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQHT 413
           FIE++LKENGH+VIV+AEGAGQE+VAQSM AV EKDASGNRLLLD+GLWL+QKIK   T
Sbjct: 356 FIEQRLKENGHVVIVLAEGAGQEYVAQSMHAVSEKDASGNRLLLDVGLWLSQKIKDHFT 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224112817|ref|XP_002332698.1| predicted protein [Populus trichocarpa] gi|222832952|gb|EEE71429.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255539891|ref|XP_002511010.1| phosphofructokinase, putative [Ricinus communis] gi|223550125|gb|EEF51612.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535482|ref|XP_003536274.1| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357442761|ref|XP_003591658.1| 6-phosphofructokinase [Medicago truncatula] gi|355480706|gb|AES61909.1| 6-phosphofructokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449458333|ref|XP_004146902.1| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|79331832|ref|NP_001032120.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] gi|332010110|gb|AED97493.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22328001|ref|NP_200966.2| 6-phosphofructokinase 4 [Arabidopsis thaliana] gi|75171244|sp|Q9FKG3.1|K6PF4_ARATH RecName: Full=6-phosphofructokinase 4, chloroplastic; Short=Phosphofructokinase 4; AltName: Full=Phosphohexokinase 4; Flags: Precursor gi|9758473|dbj|BAB09002.1| pyrophosphate-fructose-6-phosphate 1-phosphotransferase-like protein [Arabidopsis thaliana] gi|20466456|gb|AAM20545.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein [Arabidopsis thaliana] gi|22136390|gb|AAM91273.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein [Arabidopsis thaliana] gi|332010109|gb|AED97492.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297793715|ref|XP_002864742.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310577|gb|EFH41001.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|358346077|ref|XP_003637099.1| 6-phosphofructokinase [Medicago truncatula] gi|355503034|gb|AES84237.1| 6-phosphofructokinase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
TAIR|locus:2151571 530 PFK4 "phosphofructokinase 4" [ 0.905 0.705 0.796 3.6e-160
TAIR|locus:2136849 489 PFK3 "phosphofructokinase 3" [ 0.849 0.717 0.756 7.1e-148
TAIR|locus:2165046 485 PFK7 "phosphofructokinase 7" [ 0.845 0.719 0.744 1.7e-144
TAIR|locus:2134108 462 PFK6 "phosphofructokinase 6" [ 0.815 0.729 0.761 2.8e-144
TAIR|locus:2118249 473 PFK1 "phosphofructokinase 1" [ 0.852 0.744 0.718 6.3e-140
TAIR|locus:2160897444 PFK2 "phosphofructokinase 2" [ 0.772 0.718 0.554 1.4e-94
TAIR|locus:2041208537 PFK5 "phosphofructokinase 5" [ 0.663 0.510 0.555 5.1e-81
TIGR_CMR|CHY_1349361 CHY_1349 "phosphofructokinase" 0.527 0.603 0.365 4.2e-31
UNIPROTKB|P65690343 pfkA "6-phosphofructokinase" [ 0.530 0.638 0.381 3.8e-30
TIGR_CMR|CHY_1143321 CHY_1143 "6-phosphofructokinas 0.513 0.660 0.368 5.6e-29
TAIR|locus:2151571 PFK4 "phosphofructokinase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
 Identities = 298/374 (79%), Positives = 331/374 (88%)

Query:    40 RNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAY 99
             +   + P +  Q R +        +   +DGFVLEDVPHLT FLPDLPSYPNPLK+SQAY
Sbjct:    38 KKVSVLPRILHQKRLIRAQCSDGFKPEEDDGFVLEDVPHLTKFLPDLPSYPNPLKESQAY 97

Query:   100 AVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGI 159
             A+VK+TFVS ED VAQNIV+QK S RGVHFRRAGPRE+VYF+SDEV+ACIVTCGGLCPGI
Sbjct:    98 AIVKRTFVSSEDVVAQNIVVQKGSKRGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGI 157

Query:   160 NTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGG 219
             NTVIREIVCGL+ MYGV+ ILGI+GGYRGFYSKNT+ L+PKVVNDIHKRGGT L+TSRGG
Sbjct:   158 NTVIREIVCGLNNMYGVNNILGIQGGYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGG 217

Query:   220 HDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVI 279
             HDT KIVDNI+DRGINQVYIIGG GTQKGA  IY+EVE+RGLQVAV+GIPKTIDNDIAVI
Sbjct:   218 HDTAKIVDNIQDRGINQVYIIGGGGTQKGAEKIYEEVERRGLQVAVSGIPKTIDNDIAVI 277

Query:   280 DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLI 339
             DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFI+M ATLA+RDVDCCLI
Sbjct:   278 DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFIAMIATLANRDVDCCLI 337

Query:   340 PESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLD 399
             PESPF+LEG GGLFEFIE +LKEN HMVIV+AEGAGQ++VAQSM A + KDASGNRLLLD
Sbjct:   338 PESPFFLEGKGGLFEFIEERLKENRHMVIVIAEGAGQDYVAQSMRASETKDASGNRLLLD 397

Query:   400 IGLWLTQKIKIQHT 413
             +GLWLTQ+IK   T
Sbjct:   398 VGLWLTQQIKDHFT 411
GO:0003872 "6-phosphofructokinase activity" evidence=IEA;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005945 "6-phosphofructokinase complex" evidence=IEA;ISS
GO:0006096 "glycolysis" evidence=IEA;ISS;IDA
GO:0009507 "chloroplast" evidence=ISM;IDA
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134108 PFK6 "phosphofructokinase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041208 PFK5 "phosphofructokinase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1143 CHY_1143 "6-phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FKG3K6PF4_ARATH2, ., 7, ., 1, ., 1, 10.75300.98780.7698yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.110.946
3rd Layer2.7.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
PLN02564 484 PLN02564, PLN02564, 6-phosphofructokinase 0.0
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 1e-150
PTZ00286 459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 1e-136
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 1e-122
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 1e-57
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 9e-50
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 1e-48
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 2e-37
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 2e-33
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 4e-30
pfam00365279 pfam00365, PFK, Phosphofructokinase 5e-30
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 6e-30
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 8e-21
PRK14072 416 PRK14072, PRK14072, 6-phosphofructokinase; Provisi 7e-19
PRK06555403 PRK06555, PRK06555, pyrophosphate--fructose-6-phos 4e-17
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 3e-16
TIGR02477 539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 2e-15
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 2e-15
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 6e-15
cd00765 550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 2e-14
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 2e-14
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 7e-12
PRK07085 555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 1e-11
PLN03028 610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 4e-10
PLN02251 568 PLN02251, PLN02251, pyrophosphate-dependent phosph 4e-08
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information 
 Score =  749 bits (1936), Expect = 0.0
 Identities = 284/352 (80%), Positives = 324/352 (92%), Gaps = 2/352 (0%)

Query: 60  RSSNQKVHN--DGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNI 117
            SS  K+     G+VLEDVPHLT++LPDLP+YPNPL+ + AY+VVKQ FV+ +D VAQ I
Sbjct: 1   GSSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKI 60

Query: 118 VIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVD 177
           V+ KDSPRG HFRRAGPR+KVYF+SDEVRACIVTCGGLCPG+NTVIREIVCGLSYMYGV 
Sbjct: 61  VVHKDSPRGTHFRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVT 120

Query: 178 EILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQV 237
            ILGI+GGYRGFYS+NT+ L+PKVVNDIHKRGGTIL TSRGGHDT+KIVD+I+DRGINQV
Sbjct: 121 RILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 180

Query: 238 YIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAIN 297
           YIIGGDGTQKGA++IY+E+ +RGL+VAVAGIPKTIDNDI VIDKSFGFDTAVEEAQRAIN
Sbjct: 181 YIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN 240

Query: 298 AAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIE 357
           AAHVE ESVENG+G+VKLMGRYSGFI+MYATLASRDVDCCLIPESPFYLEG GGLFEFIE
Sbjct: 241 AAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIE 300

Query: 358 RQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIK 409
           ++LKENGHMVIVVAEGAGQ+ +A+SM + D +DASGN+LLLD+GLWL+QKIK
Sbjct: 301 KRLKENGHMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIK 352

Length = 484
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
PLN02564 484 6-phosphofructokinase 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PTZ00286 459 6-phospho-1-fructokinase; Provisional 100.0
PLN02884411 6-phosphofructokinase 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PRK14072 416 6-phosphofructokinase; Provisional 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
TIGR02477 539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
PRK07085 555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
cd00765 550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
PLN03028 610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
PLN02251 568 pyrophosphate-dependent phosphofructokinase 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 91.86
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 91.68
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.58
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.9
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.37
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 88.96
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.94
PLN02929301 NADH kinase 88.58
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.42
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.91
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.89
TIGR01918431 various_sel_PB selenoprotein B, glycine/betaine/sa 87.84
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 87.6
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.4
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 85.42
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 85.41
PRK13055334 putative lipid kinase; Reviewed 85.11
PRK11914306 diacylglycerol kinase; Reviewed 84.87
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 84.82
PRK13337304 putative lipid kinase; Reviewed 84.43
PF00532279 Peripla_BP_1: Periplasmic binding proteins and sug 84.13
PRK13054300 lipid kinase; Reviewed 84.02
TIGR03702293 lip_kinase_YegS lipid kinase YegS. Members of this 82.79
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.43
TIGR01917431 gly_red_sel_B glycine reductase, selenoprotein B. 82.3
PLN02958 481 diacylglycerol kinase/D-erythro-sphingosine kinase 81.95
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 81.12
cd01537264 PBP1_Repressors_Sugar_Binding_like Ligand-binding 80.23
>PLN02564 6-phosphofructokinase Back     alignment and domain information 
Probab=100.00  E-value=1e-97  Score=771.62  Aligned_cols=354  Identities=80%  Similarity=1.314  Sum_probs=338.3

Q ss_pred             cCCCcceeccccccccccCCCCcccccccchhhcCCCCCCCCCCCCCCcccccccccccccChHHHHHHHhccCCCCccc
Q 015095           49 SRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVH  128 (413)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~eav~~l~~~~p~~p~~~~~l~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~~r~~~  128 (413)
                      .+++|+++|+          .+|++|+||||.+++|+.|++++||..|++++.....||++++.|+..+..++...++.+
T Consensus         2 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~   71 (484)
T PLN02564          2 SSKPKIVTGD----------AGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKIVVHKDSPRGTH   71 (484)
T ss_pred             CCcCccccCC----------CceeeccCcchhhcCCCcCCCCCccCCCcccccccceEeCCCCeEEEeecccccccCCcc
Confidence            4678899998          999999999999999999999999999999999999999999999998866666678899


Q ss_pred             ccccCCccccccCCCCeeEEEEccCCCCchhHHHHHHHHHHHhHhCCCcEEEEEcccchhccCCCeeeCChhhHhhhhhc
Q 015095          129 FRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKR  208 (413)
Q Consensus       129 F~~agpr~~~~~~~~~~~iaIvtsGG~apGmNavIr~iv~~l~~~~~~~~V~Gi~~G~~GL~~~~~~~Lt~~~V~~i~~~  208 (413)
                      |++||||+++||+|+++|||||||||+|||||+|||++|+.+.+.|++.+||||++||+||+++++++|+|+.|++|+++
T Consensus        72 ~~~agpr~~i~f~p~~~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~  151 (484)
T PLN02564         72 FRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKR  151 (484)
T ss_pred             ceecCCcceEEEcCcceEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCeEeCCHHHhhcHhhC
Confidence            99999999999999999999999999999999999999999887788889999999999999999999999999999999


Q ss_pred             CCceeeecCCCCcHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCCceeeeeeccccCCCcccccccCchhH
Q 015095          209 GGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTA  288 (413)
Q Consensus       209 GGs~LGTsR~~~d~~~iv~~l~~~~Id~LivIGGdgS~~~a~~L~e~~~~~~~~i~vvgIPkTIDNDI~gtD~S~GFdTA  288 (413)
                      |||+|||||+++++++++++|++++||+||+|||||||++|++|+++++++|++|+||||||||||||++||+|||||||
T Consensus       152 GGTiLGTsR~~~~~~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTA  231 (484)
T PLN02564        152 GGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTA  231 (484)
T ss_pred             CCceeccCCCcchHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCcEEEEEcCCCCcchHHHHHhhhcCCccEEEcCCCCCCCCChhhHHHHHHHHHHhCCcEEE
Q 015095          289 VEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVI  368 (413)
Q Consensus       289 v~~~~~~i~~i~~~A~s~~~rv~iVEvMGR~sG~LA~~aaLA~~~ad~ilIPE~pf~l~~~~~~~e~i~~r~~~~~~~vI  368 (413)
                      +++++++|++++++|.|+++||||||+|||+|||||++++||+++||+|||||.||+++++.+++++|++|+++++|+||
T Consensus       232 v~~~~~aI~~i~~tA~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~pf~le~~~~ll~~i~~rl~~~~~~VI  311 (484)
T PLN02564        232 VEEAQRAINAAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVI  311 (484)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCCCCcchHHHHHHHHHHHHhccCCEEE
Confidence            99999999999999999988999999999999999999999996799999999999999888999999999999999999


Q ss_pred             EEeCCCCcccccccCCcccccCCCCCcccccHHHHHHHHHHhhh
Q 015095          369 VVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQH  412 (413)
Q Consensus       369 vvaEGa~~~~~~~~~~~~~~~Da~Gn~~l~~vg~~L~~~I~~~~  412 (413)
                      |||||+++.++.+..++...+|++||++++|+|.||+++|+++|
T Consensus       312 VVAEGagq~~~~~~~~~~~~~Da~Gn~~l~dig~~La~~I~~~~  355 (484)
T PLN02564        312 VVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHF  355 (484)
T ss_pred             EEeCCCccchhhhhhcccccccccCCcccCcHHHHHHHHHHHHh
Confidence            99999998888765444456899999999999999999999987

>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>TIGR03702 lip_kinase_YegS lipid kinase YegS Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd01537 PBP1_Repressors_Sugar_Binding_like Ligand-binding domain of the LacI-GalR family of transcription regulators and the sugar-binding domain of ABC-type transport systems Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
2hig_A 487 Crystal Structure Of Phosphofructokinase Apoenzyme 1e-58
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 1e-22
3pfk_A319 Phosphofructokinase. Structure And Control Length = 3e-22
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 4e-22
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 4e-21
1pfk_A320 Crystal Structure Of The Complex Of Phosphofructoki 2e-19
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 3e-18
1kzh_A 555 Structure Of A Pyrophosphate-dependent Phosphofruct 2e-15
3opy_B 941 Crystal Structure Of Pichia Pastoris Phosphofructok 2e-11
3o8o_A 787 Structure Of Phosphofructokinase From Saccharomyces 8e-11
3k2q_A 420 Crystal Structure Of Pyrophosphate-Dependent Phosph 1e-10
3o8l_A 762 Structure Of Phosphofructokinase From Rabbit Skelet 8e-10
3opy_A 989 Crystal Structure Of Pichia Pastoris Phosphofructok 2e-09
3o8o_B 766 Structure Of Phosphofructokinase From Saccharomyces 6e-09
3hno_A 419 Crystal Structure Of Pyrophosphate-Dependent Phosph 2e-04
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure 
Iteration: 1

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 193/332 (58%), Gaps = 23/332 (6%)
Query: 89  YPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRG--------VHFRRAGPREKVYF 140
           YPNP KK  +    +  F    D +  N    +D P          +    A  R +++F
Sbjct: 39  YPNPSKKYSS----RTEFRDKTDYIMYNPR-PRDEPSSENPVSVSPLLCELAAARSRIHF 93
Query: 141 KSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLT---L 197
              E    IVTCGG+CPG+N VIR I      +Y V  ++G   GY G   K + T   L
Sbjct: 94  NPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIEL 153
Query: 198 SPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVE 257
               V +IH  GGTIL +SRG  D  ++VD +E  G+N ++ +GGDGTQ+GA +I +E +
Sbjct: 154 HRGRVTNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAK 213
Query: 258 KRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMG 317
           +RG+ ++V G+PKTIDND++   ++FGF TAVE+A +AI AA+ E  S   GVG+VKLMG
Sbjct: 214 RRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMG 273
Query: 318 RYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQE 377
           R SGFI+  A +AS   + CL+PE+P   +    +   +ER+   +   VI+VAEG GQ+
Sbjct: 274 RDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQD 330
Query: 378 FVAQSMPAVDEKDASGNRLLLDIGLWLTQKIK 409
           +   S       DASGN+ L+DIG+ LT+K+K
Sbjct: 331 WGRGS----GGYDASGNKKLIDIGVILTEKVK 358
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 Back     alignment and structure
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 Back     alignment and structure
>pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target Mqr88 Length = 420 Back     alignment and structure
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 Back     alignment and structure
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 Back     alignment and structure
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 Back     alignment and structure
>pdb|3HNO|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Nitrosospira Multiformis. Northeast Structural Genomics Consortium Target Id Nmr42 Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
2hig_A 487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 1e-159
2f48_A 555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 3e-87
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 1e-52
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 3e-52
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 1e-51
3hno_A 419 Pyrophosphate-dependent phosphofructokinase; struc 9e-51
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 6e-47
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 7e-39
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 6e-47
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 4e-42
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 1e-46
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 8e-41
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 1e-46
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 6e-40
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 8e-45
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 3e-40
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
 Score =  457 bits (1177), Expect = e-159
 Identities = 138/362 (38%), Positives = 202/362 (55%), Gaps = 23/362 (6%)

Query: 60  RSSNQKVHNDGFVLEDVPHLTNFLPDLP--SYPNPLKKSQAYAVVKQTFVSPEDAVAQNI 117
           R +++ V     +L  V      +  LP   YPNP KK  +       F    D +  N 
Sbjct: 8   RVTSKLVKAHRAMLNSVTQEDLKVDRLPGADYPNPSKKYSSR----TEFRDKTDYIMYNP 63

Query: 118 VIQKD-------SPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGL 170
             + +       S   +    A  R +++F   E    IVTCGG+CPG+N VIR I    
Sbjct: 64  RPRDEPSSENPVSVSPLLCELAAARSRIHFNPTETTIGIVTCGGICPGLNDVIRSITLTG 123

Query: 171 SYMYGVDEILGIEGGYRGFY---SKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVD 227
             +Y V  ++G   GY G     S+  + L    V +IH  GGTIL +SRG  D  ++VD
Sbjct: 124 INVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGPQDPKEMVD 183

Query: 228 NIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDT 287
            +E  G+N ++ +GGDGTQ+GA +I +E ++RG+ ++V G+PKTIDND++   ++FGF T
Sbjct: 184 TLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQT 243

Query: 288 AVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLE 347
           AVE+A +AI AA+ E  S   GVG+VKLMGR SGFI+  A +AS   + CL+PE+P   +
Sbjct: 244 AVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ 303

Query: 348 GPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQK 407
               +   +ER+   +   VI+VAEG GQ++           DASGN+ L+DIG+ LT+K
Sbjct: 304 ---EVMSLLERRFCHSRSCVIIVAEGFGQDW----GRGSGGYDASGNKKLIDIGVILTEK 356

Query: 408 IK 409
           +K
Sbjct: 357 VK 358
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
2hig_A 487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
3hno_A 419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
2f48_A 555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 94.36
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 92.5
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 91.31
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 83.64
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 83.64
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
Probab=100.00  E-value=1e-84  Score=676.39  Aligned_cols=335  Identities=40%  Similarity=0.658  Sum_probs=301.8

Q ss_pred             CCCCcccccccchhhcCCCC--CCCCCCCCCCcccccccccccccChHHHHHHHhccCC-------CCcccccccCCccc
Q 015095           67 HNDGFVLEDVPHLTNFLPDL--PSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDS-------PRGVHFRRAGPREK  137 (413)
Q Consensus        67 ~~~~~~~eav~~l~~~~p~~--p~~~~~l~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~-------~r~~~F~~agpr~~  137 (413)
                      ..-.+.++.|+.+.-..|.+  |++++||..|..    ...||.+++.|+..+....+.       .....|+++|||++
T Consensus        15 ~~~~~~~~~~~~~~~~i~~lg~~~~~~p~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~agpr~~   90 (487)
T 2hig_A           15 KAHRAMLNSVTQEDLKVDRLPGADYPNPSKKYSS----RTEFRDKTDYIMYNPRPRDEPSSENPVSVSPLLCELAAARSR   90 (487)
T ss_dssp             ECTTCSCSSCCTTTTCCEECSCCCEECTTCCGGG----GGGSBSSCCEEESCCCBCC-----CCBBSCCCEEEECCCBSE
T ss_pred             ccccccccCCCccccccCcCCCCCCCCcccccCC----CCeeeCCCCEEEEeeeccCCCccccccccchHHHHHcCCcce
Confidence            33567889999886666766  778999977655    588999999998765332221       12347999999999


Q ss_pred             cccCCCCeeEEEEccCCCCchhHHHHHHHHHHHhHhCCCcEEEEEcccchhccC---CCeeeCChhhHhhhhhcCCceee
Q 015095          138 VYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYS---KNTLTLSPKVVNDIHKRGGTILR  214 (413)
Q Consensus       138 ~~~~~~~~~iaIvtsGG~apGmNavIr~iv~~l~~~~~~~~V~Gi~~G~~GL~~---~~~~~Lt~~~V~~i~~~GGs~LG  214 (413)
                      +||+++.+||||+||||||||||++||++|+++...|+..+||||++||+||++   +++++|+|+.|++|+++|||+||
T Consensus        91 i~f~~~~~rIgIltsGGdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~~~L~~~~V~~i~~~GGTiLG  170 (487)
T 2hig_A           91 IHFNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILG  170 (487)
T ss_dssp             ESSCGGGCEEEEEECSSCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSC
T ss_pred             eeecCCCcEEEEEecCCCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCEEECCHHHHHHHHhCCCCeec
Confidence            999999999999999999999999999999998766776799999999999964   69999999999999999999999


Q ss_pred             ecCCCCcHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCCceeeeeeccccCCCcccccccCchhHHHHHHH
Q 015095          215 TSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR  294 (413)
Q Consensus       215 TsR~~~d~~~iv~~l~~~~Id~LivIGGdgS~~~a~~L~e~~~~~~~~i~vvgIPkTIDNDI~gtD~S~GFdTAv~~~~~  294 (413)
                      |+|++.+.++++++|++++||+||+||||||+++|++|++++++++++|+||||||||||||++||+|||||||++++++
T Consensus       171 TsR~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~~~~e  250 (487)
T 2hig_A          171 SSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQ  250 (487)
T ss_dssp             CCCSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccCCcEEEEEcCCCCcchHHHHHhhhcCCccEEEcCCCCCCCCChhhHHHHHHHHHHhCCcEEEEEeCCC
Q 015095          295 AINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGA  374 (413)
Q Consensus       295 ~i~~i~~~A~s~~~rv~iVEvMGR~sG~LA~~aaLA~~~ad~ilIPE~pf~l~~~~~~~e~i~~r~~~~~~~vIvvaEGa  374 (413)
                      +|++++++|.|+++||||||+|||+|||||+++|||+++||+|||||.||+++   +++++|++|+++++|++||||||+
T Consensus       251 aId~i~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~---~i~~~i~~r~~~k~~~IIvVaEGa  327 (487)
T 2hig_A          251 AIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGF  327 (487)
T ss_dssp             HHHHHHHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHH---HHHHHHHHHTTSCSEEEEEEETTT
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHH---HHHHHHHHHHhcCCcEEEEEeCCC
Confidence            99999999999988999999999999999999999993399999999999987   899999999988899999999999


Q ss_pred             CcccccccCCcccccCCCCCcccccHHHHHHHHHHhhh
Q 015095          375 GQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKIQH  412 (413)
Q Consensus       375 ~~~~~~~~~~~~~~~Da~Gn~~l~~vg~~L~~~I~~~~  412 (413)
                      ++.+...    ...+|++||++++++|.||+++|+++|
T Consensus       328 g~~~~~~----~~~~Da~G~~~l~~i~~~l~~~i~~~~  361 (487)
T 2hig_A          328 GQDWGRG----SGGYDASGNKKLIDIGVILTEKVKAFL  361 (487)
T ss_dssp             TGGGCCC------CBCTTSCBCCCCHHHHHHHHHHHHH
T ss_pred             ccccccc----ccccccccCcchhHHHHHHHHHHHHHH
Confidence            8765533    235799999999999999999999886
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 413
d2f48a1 550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 6e-62
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 4e-44
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 4e-42
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  206 bits (526), Expect = 6e-62
 Identities = 69/305 (22%), Positives = 125/305 (40%), Gaps = 22/305 (7%)

Query: 87  PSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPR-----GVHFRRAGPREKVYFK 141
           P  PN LKK   +  +   +    +A+     +++          + F            
Sbjct: 12  PKLPNILKK--DFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGESSLS---F 66

Query: 142 SDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKV 201
           S  +   I+  GG  PG + VI  +   +       ++ G +GG  G    + + L+  +
Sbjct: 67  SKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESL 126

Query: 202 VNDIHKRGGTILRTSRGGH-----DTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEV 256
           +N     GG  + +S           NK +   ++  +N + IIGGD +   AA++ +  
Sbjct: 127 INSYRNTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYF 186

Query: 257 EKRGLQVAVAGIPKTIDNDIA--VIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVK 314
           +K G  + V G+PKTID D+    I+ SFGFD+A +     I     +  S +     VK
Sbjct: 187 KKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVK 246

Query: 315 LMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFI-----ERQLKENGHMVIV 369
           LMGR +  +++   L +    C +  E     +    + + +     +R L  +   V++
Sbjct: 247 LMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVI 306

Query: 370 VAEGA 374
           V EG 
Sbjct: 307 VPEGL 311
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
d2f48a1 550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 85.62
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 84.61
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 83.75
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 83.68
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 81.52
d1ig3a2169 Thiamin pyrophosphokinase, catalytic domain {Mouse 80.53
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

Probab=100.00  E-value=5.9e-67  Score=549.15  Aligned_cols=284  Identities=23%  Similarity=0.370  Sum_probs=241.3

Q ss_pred             CcccccccCCccccccCCCCeeEEEEccCCCCchhHHHHHHHHHHHhHhCCCcEEEEEcccchhccCCCeeeCChhhHhh
Q 015095          125 RGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVND  204 (413)
Q Consensus       125 r~~~F~~agpr~~~~~~~~~~~iaIvtsGG~apGmNavIr~iv~~l~~~~~~~~V~Gi~~G~~GL~~~~~~~Lt~~~V~~  204 (413)
                      +...|.++-+.  .. ..+.+|||||||||||||||+||+++++++...+++++||||++||+||+++++++|+|+.++.
T Consensus        53 p~~~~~~~~~~--~~-~~~~~rIgIl~sGG~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~  129 (550)
T d2f48a1          53 PIISFTEGESS--LS-FSKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINS  129 (550)
T ss_dssp             CCEEEEESCCC--CS-CCSCCEEEEEEBSSCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHH
T ss_pred             ceeeeccCCCC--CC-cCCCCEEEEECcCCCcHHHHHHHHHHHHHHHHhCCCCEEEEECcchHHhcCCCEEECCHHHHhh
Confidence            44567654332  21 2457899999999999999999999999987777889999999999999999999999999999


Q ss_pred             hhhcCCceeeecCC-C----CcHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCCceeeeeeccccCCCcc-
Q 015095          205 IHKRGGTILRTSRG-G----HDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAV-  278 (413)
Q Consensus       205 i~~~GGs~LGTsR~-~----~d~~~iv~~l~~~~Id~LivIGGdgS~~~a~~L~e~~~~~~~~i~vvgIPkTIDNDI~g-  278 (413)
                      |+++||+.|||+|. +    +++++++++|++++||+||+||||||+++|+.|++++++++.+|+|||||||||||+++ 
T Consensus       130 ~~~~GG~~l~~s~r~~~~~~e~~~~i~~~l~~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~  209 (550)
T d2f48a1         130 YRNTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRND  209 (550)
T ss_dssp             HTTCCSSTTTCCBCCCCCSHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCS
T ss_pred             HHhCCCcEecCCCCCCCcCHHHHHHHHHHHHhcCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCc
Confidence            99999998877654 2    46889999999999999999999999999999999999999999999999999999976 


Q ss_pred             -cccccCchhHHHHHHHHHHHHHHhhhccCCcEEEEEcCCCCcchHHHHHhhhcCCccEEEcCCCCCCCCC-hhhHHHH-
Q 015095          279 -IDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEG-PGGLFEF-  355 (413)
Q Consensus       279 -tD~S~GFdTAv~~~~~~i~~i~~~A~s~~~rv~iVEvMGR~sG~LA~~aaLA~~~ad~ilIPE~pf~l~~-~~~~~e~-  355 (413)
                       ||+|||||||+++++++|++++.+|.|++++|||||+|||+|||||++||||+ +||+|||||++++.+. +.++++. 
T Consensus       210 ~~d~s~GfdTA~~~~~~~i~~l~~da~S~~~~~~~VevMGR~aG~lAl~~alat-~a~~ilipE~~~~~~~~L~~i~~~i  288 (550)
T d2f48a1         210 HIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALKT-HPNICIVSEEVLAKKKTLSEIIDEM  288 (550)
T ss_dssp             SCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCTTSCHHHHHHHHHH-CCSEECCHHHHHHTTCCHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhhcccceEEEEEecCCCcHHHHHHHHhc-CCceEEecccccchhhhHHHHHHHH
Confidence             99999999999999999999999999988999999999999999999999999 7999999999876542 3344444 


Q ss_pred             ---HHHHHHh-CCcEEEEEeCCCCcccc------cc--------------------------cCC---------------
Q 015095          356 ---IERQLKE-NGHMVIVVAEGAGQEFV------AQ--------------------------SMP---------------  384 (413)
Q Consensus       356 ---i~~r~~~-~~~~vIvvaEGa~~~~~------~~--------------------------~~~---------------  384 (413)
                         |.+|... ++|+||||+||+.+...      .+                          .++               
T Consensus       289 ~~~I~kR~~~gk~~gvIvV~EGli~~ipe~~~Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~~~l~~~lp~~i~  368 (550)
T d2f48a1         289 VSVILKRSLNGDNFGVVIVPEGLIEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQ  368 (550)
T ss_dssp             HHHHHHHHHTTCCCEEEEEETTGGGTSHHHHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHH
T ss_pred             HHHHHHHHHcCCCcEEEEecCcccccchHHHHHHHHHHHhhhhcccccccccchhhhhhhhhhcchhhhhhhhcccHHHH
Confidence               4455544 57999999999843210      00                          000               


Q ss_pred             -----cccccCCCCCccccc--HHHHHHHHHHhhh
Q 015095          385 -----AVDEKDASGNRLLLD--IGLWLTQKIKIQH  412 (413)
Q Consensus       385 -----~~~~~Da~Gn~~l~~--vg~~L~~~I~~~~  412 (413)
                           +...+|++||+++++  ++++|++.|++++
T Consensus       369 ~qll~~~~~rD~~G~~~ls~I~~e~lLa~~V~~~L  403 (550)
T d2f48a1         369 FELIKSILERDPHGNFNVSRVPTEKLFIEMIQSRL  403 (550)
T ss_dssp             HHHHHHHHTCCTTCCCCCTTSCHHHHHHHHHHHHH
T ss_pred             HHHhhcccccCCCCCeeeccccHHHHHHHHHHHHH
Confidence                 012479999999997  5889999998775
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure