Citrus Sinensis ID: 015272

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Protein Sequence
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Secondary Structure (PSIPRED)
cccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccccccccccccccccccccEEEcccccccccccEccccccEEEEEccccccccccHEHEHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
masfveidrcshlislpltslnacpcrpssnkiliftqkqppklnvrivfnrpkftlRVRQTGIDTNRRMISAVAraepdhlddgnlkegidngHKLVVSEksvsdsgsqQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSrgiaagmtpppryvSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGlfycgylpcfwvklrcglsapalntgigvswpillgglphwTVGLVATLISFSSIIAADtfafiggkafgrtqltsispkktwegtivgLGGCIATTVVLSKifcwprylpsaiVFGFLNFfgsvfgdltesmikrdagvkdsgslipghggildrvdsYIFTGALAYSFVKtflplygv
Flexible Loop (DISEMBL)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILiftqkqppklnvrivfnrpkftlrvrqtgidtnrrmISAVAraepdhlddgnlkeGIDNGHKLVVSEksvsdsgsqqKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRgiaagmtppprYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFgrtqltsispkktwegtivGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Low Complexity Region (SEG)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRigfglgigifvggvvlaggWvftvcfaaavfvgaREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDvsvtfaafvvamalllQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered region (IsUnstruct)
***FVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMIS*********************************************KRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY**
Disordered Region (DISOPRED)
**SFV**DRCSHLISLPLTSLNA************************************************************************************************IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered Region (DISEMBL)
********RCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVS***************LRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered Region (DISPRO)
*ASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAE************************************QLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	410	2.2.26 [Sep-21-2011]
P73548	293	Phosphatidate cytidylyltr	N/A	no	0.636	0.890	0.405	4e-47
Q9ZML7	266	Phosphatidate cytidylyltr	yes	no	0.319	0.492	0.423	1e-19
O25004	266	Phosphatidate cytidylyltr	yes	no	0.319	0.492	0.416	3e-18
P44937	288	Phosphatidate cytidylyltr	yes	no	0.287	0.409	0.451	4e-18
P0ABG3	285	Phosphatidate cytidylyltr	yes	no	0.239	0.343	0.495	1e-16
P0ABG1	285	Phosphatidate cytidylyltr	N/A	no	0.239	0.343	0.495	1e-16
P0ABG2	285	Phosphatidate cytidylyltr	N/A	no	0.239	0.343	0.495	1e-16
Q59640	271	Phosphatidate cytidylyltr	yes	no	0.256	0.387	0.439	4e-16
O31752	269	Phosphatidate cytidylyltr	yes	no	0.368	0.561	0.364	9e-15
Q68WV5	228	Phosphatidate cytidylyltr	yes	no	0.285	0.513	0.414	1e-14

>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=cdsA PE=3 SV=1

 Score =  189 bits (480), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/271 (40%), Positives = 158/271 (58%), Gaps = 10/271 (3%)

Query: 133 VVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTL 192
           +++ GGW F+   A  +++G REYF++VR++GIA         +S +  +     P LT 
Sbjct: 19  LLILGGWYFSAAIALVIYLGLREYFQMVRAKGIAPA-AKTTMVLSLMLLLSATVTPHLT- 76

Query: 193 YFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCG---LS 249
                D        ++   LL Q      A +S+++ GLFY GYLP +WV+LR G   ++
Sbjct: 77  -----DAFFPLTGALICFYLLFQPKMATIADISTSLLGLFYGGYLPSYWVRLRLGDGAVN 131

Query: 250 APALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISP 309
              L+  +   WP       ++  GL+ T+++F+ I AAD  A+I GK  GRT+L+ ISP
Sbjct: 132 PMGLHLPLNGFWPESWAHPENFPTGLLVTILAFACIWAADIGAYIMGKWLGRTRLSDISP 191

Query: 310 KKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAG 369
           KKT EG++ G+GG +   V+ +    WP +  +  + G L    S+ GDLTESM+KRDAG
Sbjct: 192 KKTVEGSLWGVGGSLLVGVLGAWYLQWPYWEITGALLGLLIGIVSLLGDLTESMMKRDAG 251

Query: 370 VKDSGSLIPGHGGILDRVDSYIFTGALAYSF 400
           VKDSG LIPGHGGILDR DSY+FT  L Y F
Sbjct: 252 VKDSGQLIPGHGGILDRTDSYVFTAPLVYYF 282

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 4EC: 1

>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain J99) GN=cdsA PE=3 SV=1

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 6/137 (4%)

Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVG--LGGCIATTVVLS 331
           G VA +     ++A+D  AF GGK  G+T  T+ SP KT EG ++G  L   + + V + 
Sbjct: 125 GAVAIIWLLVVVVASDVGAFFGGKLLGKTPFTATSPNKTLEGALIGVVLASVLGSFVGMG 184

Query: 332 KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
           K+         A++F FL    +VFGDL ES +KR  GVKDSG ++PGHGG+LDR+DS +
Sbjct: 185 KL---SGGFLMALLFSFLIALMAVFGDLYESYLKRKVGVKDSGKILPGHGGVLDRLDSML 241

Query: 392 FTGALAYSFVKTFLPLY 408
           F GAL+   +  FL ++
Sbjct: 242 F-GALSLHVLLYFLEIW 257

Helicobacter pylori (strain J99) (taxid: 85963)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=cdsA PE=3 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 6/137 (4%)

Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVG--LGGCIATTVVLS 331
           G VA +     ++A+D  AF GGK  G+T  T  SP KT EG ++G  L   + + V + 
Sbjct: 125 GAVAIIWLLVVVVASDVGAFFGGKLLGKTPFTPTSPNKTLEGALIGVVLASVLGSFVGMG 184

Query: 332 KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
           K+         A+ F FL    +VFGDL ES +KR  G+KDSG ++PGHGG+LDR+DS +
Sbjct: 185 KL---SGGFFMALFFSFLIALVAVFGDLYESYLKRKVGIKDSGKILPGHGGVLDRLDSML 241

Query: 392 FTGALAYSFVKTFLPLY 408
           F GAL    +  FL ++
Sbjct: 242 F-GALGLHALLYFLEIW 257

Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3 SV=1

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 17/135 (12%)

Query: 268 LPHWTV----GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGG 322
           L H+T     GL   L  F  + AAD+ A+  G+AFG+ +L   +SP K+WEG I   GG
Sbjct: 142 LEHYTHDPYHGLFLLLYVFILVWAADSGAYFSGRAFGKRKLAPKVSPGKSWEGVI---GG 198

Query: 323 CIATTVVLSKIFCW--------PRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSG 374
            I T +VL+ IF           R +   I+        SV GDLTESM KR++GVKDS 
Sbjct: 199 LI-TALVLAFIFIHFSNNTLVGDRNITGFIILSVATVAISVLGDLTESMFKRESGVKDSS 257

Query: 375 SLIPGHGGILDRVDS 389
            LIPGHGG+LDR+DS
Sbjct: 258 QLIPGHGGVLDRIDS 272

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA PE=3 SV=2

 Score = 88.2 bits (217), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)

Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
           AD+ A++ GK FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A   
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219

Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
            ++   +    SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Shigella flexneri (taxid: 623)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12) GN=cdsA PE=1 SV=2

 Score = 88.2 bits (217), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)

Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
           AD+ A++ GK FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A   
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219

Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
            ++   +    SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7 GN=cdsA PE=3 SV=2

 Score = 88.2 bits (217), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)

Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
           AD+ A++ GK FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A   
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219

Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
            ++   +    SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cdsA PE=3 SV=2

 Score = 86.3 bits (212), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 2/107 (1%)

Query: 285 IIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA 343
           +  AD  A+  GKAFG+ +L   +SP K+WEG   GL   +A T+ +     W       
Sbjct: 145 VWGADIGAYFSGKAFGKRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLYRGWSLGALLL 204

Query: 344 IVFGFLNF-FGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
            + G     F S+ GDLTESM KR +G+KDS +L+PGHGG+LDR+DS
Sbjct: 205 ALLGAALVVFVSIVGDLTESMFKRQSGIKDSSNLLPGHGGVLDRIDS 251

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|O31752|CDSA_BACSU Phosphatidate cytidylyltransferase OS=Bacillus subtilis (strain 168) GN=cdsA PE=3 SV=1

 Score = 81.6 bits (200), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 11/162 (6%)

Query: 248 LSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQL-TS 306
           ++  A+  G+   + I +  L  +  GL     +   I + D+ A+  GK+ G+ +L   
Sbjct: 113 ITLAAIYIGMCFHYFIEIRNLDQY--GLTYIFYACVVIWSTDSGAYFVGKSLGKRKLWPE 170

Query: 307 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL-NFFGSVFG---DLTES 362
           ISP KT EG      G I   +VL+ IF     LP   ++  L   F SVFG   DL ES
Sbjct: 171 ISPNKTVEG----FAGGIVIALVLATIFQLVAQLPIPYIYLLLITLFLSVFGQLGDLVES 226

Query: 363 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
            +KR   VKDSG+++PGHGGILDR DS++F     Y  +  F
Sbjct: 227 ALKRHYDVKDSGNILPGHGGILDRFDSFLFVMPFLYFLLALF 268

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|Q68WV5|CDSA_RICTY Phosphatidate cytidylyltransferase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=cdsA PE=3 SV=1

 Score = 81.3 bits (199), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 11/128 (8%)

Query: 276 VATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSK 332
           +  ++ F  I + DTFA IGGK F  T+L   ISPKKTW G I+G    G IA  V L  
Sbjct: 93  LVIMLYFCIIWSVDTFAMIGGKTFKGTKLAPKISPKKTWTGLIIGTISAGLIAVLVSLIP 152

Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFG------DLTESMIKRDAGVKDSGSLIPGHGGILDR 386
            +    Y  S  ++ F+     +        DL  S  KR   +KDSG +IPGHGG+LDR
Sbjct: 153 YYHIENYYFSNKIYLFI--ISCILALIAQSSDLFISYFKRKFNIKDSGHIIPGHGGVLDR 210

Query: 387 VDSYIFTG 394
            DS I T 
Sbjct: 211 FDSIILTA 218

Rickettsia typhi (strain ATCC VR-144 / Wilmington) (taxid: 257363)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
255541190	404	Phosphatidate cytidylyltransferase, puta	0.965	0.980	0.746	1e-167
296089206	397	unnamed protein product [Vitis vinifera]	0.968	1.0	0.726	1e-155
359489454	402	PREDICTED: phosphatidate cytidylyltransf	0.968	0.987	0.720	1e-154
145361012	430	cytidinediphosphate diacylglycerol synth	0.951	0.906	0.698	1e-152
15292689	391	putative phosphatidate cytidylyltransfer	0.951	0.997	0.700	1e-151
297824557	403	hypothetical protein ARALYDRAFT_483649 [	0.953	0.970	0.691	1e-150
449510780	406	PREDICTED: phosphatidate cytidylyltransf	0.975	0.985	0.677	1e-149
449445455	406	PREDICTED: phosphatidate cytidylyltransf	0.975	0.985	0.674	1e-148
42571237	382	cytidinediphosphate diacylglycerol synth	0.929	0.997	0.683	1e-148
15232383	399	cytidinediphosphate diacylglycerol synth	0.960	0.987	0.684	1e-147

>gi|255541190|ref|XP_002511659.1| Phosphatidate cytidylyltransferase, putative [Ricinus communis] gi|223548839|gb|EEF50328.1| Phosphatidate cytidylyltransferase, putative [Ricinus communis]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/399 (74%), Positives = 332/399 (83%), Gaps = 3/399 (0%)

Query: 12  HLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMI 71
           +L+ L +T L A PC P S K  I  Q+   K+++R+V N  K    V    +   R +I
Sbjct: 9   NLVPLSVTCLCARPCLPLSKKTQILPQRCS-KISLRLVLNGSKAAFPVHTNSLSAMRLLI 67

Query: 72  SAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVG 131
           +A+ARAEPD L   + KE +D G+    SE+S+ ++  Q+K SQL KRI FGLGIGI VG
Sbjct: 68  TAIARAEPDRLGQEDEKEEVDKGNNFPKSEESIVET--QKKGSQLTKRIVFGLGIGISVG 125

Query: 132 GVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILT 191
           GVV+AGGWVFTV  AAAVFVG+REYFELVRSRGI A MTPPPRYVSRVCSVICA MP+LT
Sbjct: 126 GVVMAGGWVFTVALAAAVFVGSREYFELVRSRGITARMTPPPRYVSRVCSVICALMPLLT 185

Query: 192 LYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAP 251
           LY GQID+ VTFAAFVVAMALLLQRGNPRFAQLSST+FGLFYCGYLPCFWVKLRCGL+ P
Sbjct: 186 LYNGQIDIPVTFAAFVVAMALLLQRGNPRFAQLSSTMFGLFYCGYLPCFWVKLRCGLAVP 245

Query: 252 ALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKK 311
           ALNT IG +WP+L GG  HWTVGLVATLIS SSIIAADT+AF+GGKAFGRT LTSISPKK
Sbjct: 246 ALNTRIGATWPVLFGGQAHWTVGLVATLISMSSIIAADTYAFMGGKAFGRTPLTSISPKK 305

Query: 312 TWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVK 371
           TWEGTIVGLGGCIAT+V+LS+IFCWP  L SAI FGFLNFFGSVFGDLTESMIKRDAGVK
Sbjct: 306 TWEGTIVGLGGCIATSVILSRIFCWPTSLLSAIAFGFLNFFGSVFGDLTESMIKRDAGVK 365

Query: 372 DSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           DSGSLIPGHGGILDRVDSY+FTGALAYSFVKTFLPLYGV
Sbjct: 366 DSGSLIPGHGGILDRVDSYMFTGALAYSFVKTFLPLYGV 404

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089206|emb|CBI38909.3| unnamed protein product [Vitis vinifera]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/410 (72%), Positives = 332/410 (80%), Gaps = 13/410 (3%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MAS++EIDR   LI L +  L   PCR  S+K L+ T+    K ++ +V + P+   R+ 
Sbjct: 1   MASYIEIDRYG-LIPLAVAPL---PCRRPSSKTLVLTRPSS-KFSLGLVLHGPRTVFRI- 54

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
                 +RR I+AVAR EPD   + + +E +D G KL ++E  VS+   QQK SQ +KR+
Sbjct: 55  -----NSRRFITAVARTEPDRRGEDSAREEVDKGLKLPINEDLVSEH--QQKESQFKKRV 107

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FGLGIGI VGGVVLAGGWVFT   AAAVF+GAREYFELVRS GI AGMTPPPRYVSRVC
Sbjct: 108 VFGLGIGILVGGVVLAGGWVFTAALAAAVFIGAREYFELVRSHGITAGMTPPPRYVSRVC 167

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MP+LTLYFG IDVSVT AAF VAMALLLQRGNPRFAQLSS +FGLFYCGYLPCF
Sbjct: 168 SVICAVMPLLTLYFGNIDVSVTSAAFFVAMALLLQRGNPRFAQLSSAMFGLFYCGYLPCF 227

Query: 241 WVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFG 300
           WVKLRCGL+APALNT IG +WP LLGG  HWTVGLV TLIS SSIIAADT+AF+GGKAFG
Sbjct: 228 WVKLRCGLAAPALNTRIGTAWPFLLGGQAHWTVGLVVTLISISSIIAADTYAFLGGKAFG 287

Query: 301 RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLT 360
           RT LT+ISPKKTWEG I GLGGCIAT+V+LSKIF WP  L SAI FGFLNFFGS+FGDLT
Sbjct: 288 RTPLTNISPKKTWEGVIAGLGGCIATSVILSKIFRWPTSLSSAIAFGFLNFFGSLFGDLT 347

Query: 361 ESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           ESMIKRDAGVKDSGSLIPGHGGILDR DSYIFTGALAYSFVKTFLPLYGV
Sbjct: 348 ESMIKRDAGVKDSGSLIPGHGGILDRADSYIFTGALAYSFVKTFLPLYGV 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489454|ref|XP_002281170.2| PREDICTED: phosphatidate cytidylyltransferase [Vitis vinifera]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 299/415 (72%), Positives = 333/415 (80%), Gaps = 18/415 (4%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MAS++EIDR   LI L +  L   PCR  S+K L+ T+    K ++ +V + P+   R+ 
Sbjct: 1   MASYIEIDRYG-LIPLAVAPL---PCRRPSSKTLVLTRPSS-KFSLGLVLHGPRTVFRI- 54

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
                 +RR I+AVAR EPD   + + +E +D G KL ++E  VS+   QQK SQ +KR+
Sbjct: 55  -----NSRRFITAVARTEPDRRGEDSAREEVDKGLKLPINEDLVSEH--QQKESQFKKRV 107

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FGLGIGI VGGVVLAGGWVFT   AAAVF+GAREYFELVRS GI AGMTPPPRYVSRVC
Sbjct: 108 VFGLGIGILVGGVVLAGGWVFTAALAAAVFIGAREYFELVRSHGITAGMTPPPRYVSRVC 167

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MP+LTLYFG IDVSVT AAF VAMALLLQRGNPRFAQLSS +FGLFYCGYLPCF
Sbjct: 168 SVICAVMPLLTLYFGNIDVSVTSAAFFVAMALLLQRGNPRFAQLSSAMFGLFYCGYLPCF 227

Query: 241 WVKLRCGLSAPALNT-----GIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIG 295
           WVKLRCGL+APALNT     GIG +WP LLGG  HWTVGLV TLIS SSIIAADT+AF+G
Sbjct: 228 WVKLRCGLAAPALNTRLFLVGIGTAWPFLLGGQAHWTVGLVVTLISISSIIAADTYAFLG 287

Query: 296 GKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSV 355
           GKAFGRT LT+ISPKKTWEG I GLGGCIAT+V+LSKIF WP  L SAI FGFLNFFGS+
Sbjct: 288 GKAFGRTPLTNISPKKTWEGVIAGLGGCIATSVILSKIFRWPTSLSSAIAFGFLNFFGSL 347

Query: 356 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           FGDLTESMIKRDAGVKDSGSLIPGHGGILDR DSYIFTGALAYSFVKTFLPLYGV
Sbjct: 348 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRADSYIFTGALAYSFVKTFLPLYGV 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145361012|ref|NP_566035.2| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana] gi|330255421|gb|AEC10515.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 287/411 (69%), Positives = 327/411 (79%), Gaps = 21/411 (5%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+        +  TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 40  MATFAEL--------VLSTSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 85

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  +GID  H L    ++V D   Q+KASQL+KR
Sbjct: 86  GLGRISVSRRFLTAVARAESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKR 139

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 140 VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 199

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 200 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 259

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAF 299
           FWVKLRCGL+APALNTGIG +WPILLGG  HWTVGLVATLISFS +IA DTFAF+GGK F
Sbjct: 260 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 319

Query: 300 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 359
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 320 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 379

Query: 360 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 380 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 430

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15292689|gb|AAK92713.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana]

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/411 (70%), Positives = 329/411 (80%), Gaps = 21/411 (5%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+     ++S   TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 1   MATFAEL-----VLS---TSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 46

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  +GID  H L    ++V D   Q+KASQL+KR
Sbjct: 47  GLGRISVSRRFLTAVARAESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKR 100

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 101 VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 160

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 161 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 220

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAF 299
           FWVKLRCGL+APALNTGIG +WPILLGG  HWTVGLVATLISFS +IA DTFAF+GGK F
Sbjct: 221 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 280

Query: 300 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 359
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 281 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 340

Query: 360 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 341 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 391

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824557|ref|XP_002880161.1| hypothetical protein ARALYDRAFT_483649 [Arabidopsis lyrata subsp. lyrata] gi|297326000|gb|EFH56420.1| hypothetical protein ARALYDRAFT_483649 [Arabidopsis lyrata subsp. lyrata]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/422 (69%), Positives = 325/422 (77%), Gaps = 31/422 (7%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MASF E+     ++S   TS   CPCR  S K LI     PP   +R+V    K   R  
Sbjct: 1   MASFAEL-----VLS---TSRCTCPCRSFSKKPLIL----PPLSGLRLVGGDTKPLFRSG 48

Query: 61  QTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
              +   RR ++AVARAE D L DD N KE ID  H L    ++V D   Q+K SQL+KR
Sbjct: 49  LGPVSVKRRFLTAVARAESDQLGDDDNAKE-IDRIHDL----QNVEDK--QKKPSQLKKR 101

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGW FTV  AA+VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 102 VIFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 161

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAF+VA+ALL+QRG+PRFAQLSST+FGLFYCGYLPC
Sbjct: 162 CSVICAVMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPC 221

Query: 240 FWVKLRCGLSAPALNTG-----------IGVSWPILLGGLPHWTVGLVATLISFSSIIAA 288
           FWVKLRCGL+APALNTG           IG +WPILLGG  HWTVGLVATLISFS +IA 
Sbjct: 222 FWVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIAT 281

Query: 289 DTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGF 348
           DTFAF+GGKAFGRT LTSISPKKTWEGT VGL GCIA T++LSK   WP+ L S+I FGF
Sbjct: 282 DTFAFLGGKAFGRTPLTSISPKKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGF 341

Query: 349 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 408
           LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LY
Sbjct: 342 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLRLY 401

Query: 409 GV 410
           GV
Sbjct: 402 GV 403

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449510780|ref|XP_004163756.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 277/409 (67%), Positives = 323/409 (78%), Gaps = 9/409 (2%)

Query: 3   SFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVF-NRPKFTLRVRQ 61
           SF + D C  +  L  +S  ACP R SS+K L F    PP   +  +F +  K  LR+  
Sbjct: 6   SFPDFD-CFKVAPLSFSSPCACPLRLSSSKPLPF----PPAHRLHFIFLHGQKGPLRINN 60

Query: 62  TGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIG 121
                 RR I AVA AEPD +D    ++ ++ G +L   E  +++   Q K +QL+KR+ 
Sbjct: 61  RS-GLARRHIVAVAHAEPDRIDGKEPQQEVEGGQQLSFQEDPITEH--QHKKNQLKKRVV 117

Query: 122 FGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCS 181
           FG+GIGI  G VVLAGGWVFTV  AA +FVGAREYFELVRSRGI AGMTPPPRYVSR+CS
Sbjct: 118 FGIGIGITGGIVVLAGGWVFTVAVAACIFVGAREYFELVRSRGITAGMTPPPRYVSRICS 177

Query: 182 VICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFW 241
           VICAFMPIL+ YFGQ+DV++TF+AF++A+ LLLQRGNPRFAQLSS IFGLFYCGYLPCFW
Sbjct: 178 VICAFMPILSFYFGQLDVAITFSAFILAITLLLQRGNPRFAQLSSAIFGLFYCGYLPCFW 237

Query: 242 VKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGR 301
           VKLRCGL+ PA+NT IG  WP LLGG  HWTVGLVATLIS SSIIAADTFAF+GGKAFG+
Sbjct: 238 VKLRCGLAVPAVNTEIGAGWPFLLGGRAHWTVGLVATLISMSSIIAADTFAFLGGKAFGK 297

Query: 302 TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 361
           T LT++SPKKTWEGTI+GLGGCIAT+V+LSKI  WP  + SAI FGFLNF GSVFGDLTE
Sbjct: 298 TPLTNVSPKKTWEGTIMGLGGCIATSVILSKILSWPSSMISAIAFGFLNFLGSVFGDLTE 357

Query: 362 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           SMIKRDAGVKDSGSLIPGHGG+LDRVDSYIF+GALAYS++K F+PLYGV
Sbjct: 358 SMIKRDAGVKDSGSLIPGHGGLLDRVDSYIFSGALAYSYIKAFMPLYGV 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445455|ref|XP_004140488.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/409 (67%), Positives = 322/409 (78%), Gaps = 9/409 (2%)

Query: 3   SFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVF-NRPKFTLRVRQ 61
           SF + D C  +  L  +S  ACP R SS+K L      PP   +  +F +  K  LR+  
Sbjct: 6   SFPDFD-CFKVAPLSFSSPCACPLRLSSSKPLPL----PPAHRLHFIFLHGQKGPLRINN 60

Query: 62  TGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIG 121
                 RR I AVA AEPD +D    ++ ++ G +L   E  +++   Q K +QL+KR+ 
Sbjct: 61  RS-GLARRHIVAVAHAEPDRIDGKEPQQEVEGGQQLSFQEDPITEH--QHKKNQLKKRVV 117

Query: 122 FGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCS 181
           FG+GIGI  G VVLAGGWVFTV  AA +FVGAREYFELVRSRGI AGMTPPPRYVSR+CS
Sbjct: 118 FGIGIGITGGIVVLAGGWVFTVAVAACIFVGAREYFELVRSRGITAGMTPPPRYVSRICS 177

Query: 182 VICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFW 241
           VICAFMPIL+ YFGQ+DV++TF+AF++A+ LLLQRGNPRFAQLSS IFGLFYCGYLPCFW
Sbjct: 178 VICAFMPILSFYFGQLDVAITFSAFILAITLLLQRGNPRFAQLSSAIFGLFYCGYLPCFW 237

Query: 242 VKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGR 301
           VKLRCGL+ PA+NT IG  WP LLGG  HWTVGLVATLIS SSIIAADTFAF+GGKAFG+
Sbjct: 238 VKLRCGLAVPAVNTEIGAGWPFLLGGRAHWTVGLVATLISMSSIIAADTFAFLGGKAFGK 297

Query: 302 TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 361
           T LT++SPKKTWEGTI+GLGGCIAT+V+LSKI  WP  + SAI FGFLNF GSVFGDLTE
Sbjct: 298 TPLTNVSPKKTWEGTIMGLGGCIATSVILSKILSWPSSMISAIAFGFLNFLGSVFGDLTE 357

Query: 362 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           SMIKRDAGVKDSGSLIPGHGG+LDRVDSYIF+GALAYS++K F+PLYGV
Sbjct: 358 SMIKRDAGVKDSGSLIPGHGGLLDRVDSYIFSGALAYSYIKAFMPLYGV 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571237|ref|NP_973692.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana] gi|111074402|gb|ABH04574.1| At2g45150 [Arabidopsis thaliana] gi|222423214|dbj|BAH19584.1| AT2G45150 [Arabidopsis thaliana] gi|330255422|gb|AEC10516.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/411 (68%), Positives = 323/411 (78%), Gaps = 30/411 (7%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+     ++S   TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 1   MATFAEL-----VLS---TSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 46

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  + +++                Q+KASQL+KR
Sbjct: 47  GLGRISVSRRFLTAVARAESDQLGDDDHSKNVED---------------KQKKASQLKKR 91

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 92  VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 151

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 152 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 211

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAF 299
           FWVKLRCGL+APALNTGIG +WPILLGG  HWTVGLVATLISFS +IA DTFAF+GGK F
Sbjct: 212 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 271

Query: 300 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 359
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 272 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 331

Query: 360 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 332 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 382

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232383|ref|NP_191621.1| cytidinediphosphate diacylglycerol synthase 5 [Arabidopsis thaliana] gi|7329672|emb|CAB82666.1| phosphatidate cytidylyltransferase-like protein [Arabidopsis thaliana] gi|14334690|gb|AAK59523.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana] gi|16323392|gb|AAL15190.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana] gi|332646568|gb|AEE80089.1| cytidinediphosphate diacylglycerol synthase 5 [Arabidopsis thaliana]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/415 (68%), Positives = 319/415 (76%), Gaps = 21/415 (5%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILI---FTQKQPPKLNVRIVFNRPKFTL 57
           MA FVE+ R   L  L L+SL  CPCR S  K LI   F++K P  L      +  +FT 
Sbjct: 1   MAPFVEVCRYKPL-PLSLSSLCTCPCRSSPRKYLILPQFSEKYPKPL-----LSHSRFT- 53

Query: 58  RVRQTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLV-VSEKSVSDSGSQQKASQ 115
                 I  NRR+I+AVARAE + + DD N KE  +   +L  V E S  D   Q+  SQ
Sbjct: 54  -----PISVNRRVITAVARAESNQIGDDANSKEEHNIDQELQNVEEDSSLDDQKQKSRSQ 108

Query: 116 LRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRY 175
            +KR+ FGLGIG+ VGG+VLAGGWVFTV  AAAV + AREYFELVRS+GIA GMTPPPRY
Sbjct: 109 FKKRVTFGLGIGLSVGGIVLAGGWVFTVAVAAAVLLSAREYFELVRSKGIAQGMTPPPRY 168

Query: 176 VSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCG 235
           +SRVCS+ICA MPILTLYFG ID+S+T AAFVVAMALLLQRGNPRF+QLSST+FGLFYCG
Sbjct: 169 LSRVCSIICALMPILTLYFGHIDISITSAAFVVAMALLLQRGNPRFSQLSSTMFGLFYCG 228

Query: 236 YLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIG 295
           YLPCFWVKLRCGL+AP LNTGIG SWP +LGG  HWTVGLVA LISF  IIA+DTFAF+G
Sbjct: 229 YLPCFWVKLRCGLTAPVLNTGIGRSWPTILGGQAHWTVGLVAILISFCGIIASDTFAFLG 288

Query: 296 GKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSV 355
           GKAFGRT L SISPKKTWEG   GL GCI+ T++LSK   WP+ L S I FG LNFFGSV
Sbjct: 289 GKAFGRTPLISISPKKTWEGAFAGLVGCISITILLSKSLSWPQSLVSTIAFGVLNFFGSV 348

Query: 356 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
           FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV+    L+GV
Sbjct: 349 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVR----LHGV 399

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
TAIR|locus:2055627	430	CDS4 "AT2G45150" [Arabidopsis	0.926	0.883	0.636	1.7e-123
TAIR|locus:2101786	399	CDS5 "AT3G60620" [Arabidopsis	0.968	0.994	0.597	2.9e-119
TIGR_CMR|DET_0372	267	DET_0372 "phosphatidate cytidy	0.358	0.550	0.384	1.8e-24
TIGR_CMR|APH_0113	235	APH_0113 "putative phosphatida	0.412	0.719	0.370	2.4e-21
TIGR_CMR|ECH_0269	211	ECH_0269 "putative phosphatida	0.290	0.563	0.446	3.9e-21
TIGR_CMR|CBU_1381	272	CBU_1381 "phosphatidate cytidy	0.409	0.617	0.36	8.9e-20
UNIPROTKB|P0ABG1	285	cdsA "CDP-diglyceride syntheta	0.280	0.403	0.448	4.6e-19
TIGR_CMR|CJE_1536	241	CJE_1536 "phosphatidate cytidy	0.387	0.659	0.384	5.1e-18
TIGR_CMR|GSU_1916	276	GSU_1916 "phosphatidate cytidy	0.341	0.507	0.402	1.1e-17
TIGR_CMR|SO_1634	285	SO_1634 "phosphatidate cytidyl	0.295	0.424	0.412	3.3e-17

TAIR|locus:2055627 CDS4 "AT2G45150" [Arabidopsis thaliana (taxid:3702)]

 Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
 Identities = 250/393 (63%), Positives = 279/393 (70%)

Query:    19 TSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRVRQTGIDTNRRMISAVARA 77
             TS   CPCR  + K LI    +PP   +R+  + +P F   + +  I  +RR ++AVARA
Sbjct:    50 TSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLFRSGLGR--ISVSRRFLTAVARA 103

Query:    78 EPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRXXXXXXXXXXXXXXXXXX 137
             E D L D +  +GID  H L    ++V D   Q+KASQL+KR                  
Sbjct:   104 ESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKRVIFGIGIGLPVGCVVLAG 157

Query:   138 XWXXXXXXXXXXXXXXREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQI 197
              W              REYFELVRSRGIA GMTPPPRYVSRVCSVICA MPILTLYFG I
Sbjct:   158 GWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRVCSVICALMPILTLYFGNI 217

Query:   198 DXXXXXXXXXXXXXXXXQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGI 257
             D                QRG+PRFAQLSST+FGLFYCGYLP FWVKLRCGL+APALNTGI
Sbjct:   218 DILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPSFWVKLRCGLAAPALNTGI 277

Query:   258 GVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTI 317
             G +WPILLGG  HWTVGLVATLISFS +IA DTFAF+GGK FGRT LTSISPKKTWEGTI
Sbjct:   278 GRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTFGRTPLTSISPKKTWEGTI 337

Query:   318 VGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLI 377
             VGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDLTESMIKRDAGVKDSGSLI
Sbjct:   338 VGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLI 397

Query:   378 PGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
             PGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct:   398 PGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 430

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS;IMP

GO:0005886 "plasma membrane" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009536 "plastid" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

TAIR|locus:2101786 CDS5 "AT3G60620" [Arabidopsis thaliana (taxid:3702)]

 Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
 Identities = 246/412 (59%), Positives = 277/412 (67%)

Query:     1 MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
             MA FVE+ R   L  L L+SL  CPCR S  K LI      P+ + +  + +P  +   R
Sbjct:     1 MAPFVEVCRYKPL-PLSLSSLCTCPCRSSPRKYLIL-----PQFSEK--YPKPLLS-HSR 51

Query:    61 QTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLV-VSEKSVSDSGSQQKASQLRK 118
              T I  NRR+I+AVARAE + + DD N KE  +   +L  V E S  D   Q+  SQ +K
Sbjct:    52 FTPISVNRRVITAVARAESNQIGDDANSKEEHNIDQELQNVEEDSSLDDQKQKSRSQFKK 111

Query:   119 RXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXREYFELVRSRGIAAGMTPPPRYVSR 178
             R                   W              REYFELVRS+GIA GMTPPPRY+SR
Sbjct:   112 RVTFGLGIGLSVGGIVLAGGWVFTVAVAAAVLLSAREYFELVRSKGIAQGMTPPPRYLSR 171

Query:   179 VCSVICAFMPILTLYFGQIDXXXXXXXXXXXXXXXXQRGNPRFAQLSSTIFGLFYCGYLP 238
             VCS+ICA MPILTLYFG ID                QRGNPRF+QLSST+FGLFYCGYLP
Sbjct:   172 VCSIICALMPILTLYFGHIDISITSAAFVVAMALLLQRGNPRFSQLSSTMFGLFYCGYLP 231

Query:   239 CFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKA 298
             CFWVKLRCGL+AP LNTGIG SWP +LGG  HWTVGLVA LISF  IIA+DTFAF+GGKA
Sbjct:   232 CFWVKLRCGLTAPVLNTGIGRSWPTILGGQAHWTVGLVAILISFCGIIASDTFAFLGGKA 291

Query:   299 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGD 358
             FGRT L SISPKKTWEG   GL GCI+ T++LSK   WP+ L S I FG LNFFGSVFGD
Sbjct:   292 FGRTPLISISPKKTWEGAFAGLVGCISITILLSKSLSWPQSLVSTIAFGVLNFFGSVFGD 351

Query:   359 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 410
             LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV+    L+GV
Sbjct:   352 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVR----LHGV 399

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS;IMP

GO:0005886 "plasma membrane" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

TIGR_CMR|DET_0372 DET_0372 "phosphatidate cytidylyltransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 239 (89.2 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
 Identities = 58/151 (38%), Positives = 85/151 (56%)

Query:   256 GIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWE 314
             G+  S+ + L  LP     ++ TLI  +   A DT AF  G  FG+ ++  SISP K+W+
Sbjct:   119 GLLSSFWVALRELPMGREWVLWTLILTA---ATDTMAFFIGSRFGKQKMAPSISPNKSWQ 175

Query:   315 GTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSG 374
             G I G    I    + + +   P  +  A++ G L       GD+ ES+ KR+   KDSG
Sbjct:   176 GAIGGAVFSIIVAPIFADLLGLPINVFVAMLIGLLVSVAGQTGDIAESLFKRNMHCKDSG 235

Query:   375 SLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
             +LIPGHGGI+DR+DS +FTG + Y +V  F+
Sbjct:   236 NLIPGHGGIMDRLDSLLFTGIVVYYYVIWFI 266

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|APH_0113 APH_0113 "putative phosphatidate cytidylyltransferase" [Anaplasma phagocytophilum HZ (taxid:212042)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 67/181 (37%), Positives = 102/181 (56%)

Query:   231 LFYCGYLPCF-WVKLRCG---LSAPALNTGIGVSWPIL--LGGLPHWTVGLVATLISFSS 284
             LF    +  F W ++ CG      PA+   I + +  +  +  LPH T+ +++ LI   S
Sbjct:    54 LFSLAMVSSFEWHQMTCGHRWFYIPAVAM-IALPYASMAYIYTLPHGTI-ILSWLIL--S 109

Query:   285 IIAADTFAFIGGKAFG-RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA 343
             I + DT A+  G+  G R  + +ISP KTW G   G+     +T+V+S IF    Y+P +
Sbjct:   110 IWSTDTAAYFLGRTLGTRKIIPAISPGKTWVGLWAGIAFSAVSTLVMSVIF-GIFYVPHS 168

Query:   344 IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKT 403
             I+ G +    +  GD+TES +KR   VKDSG ++PGHGG++DR+D +IFT  L   +VK 
Sbjct:   169 ILIGAVIAVVAQCGDVTESAVKRMCKVKDSGFIVPGHGGVMDRMDGFIFTAPLVAYYVKH 228

Query:   404 F 404
             F
Sbjct:   229 F 229

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|ECH_0269 ECH_0269 "putative phosphatidate cytidylyltransferase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 227 (85.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
 Identities = 54/121 (44%), Positives = 70/121 (57%)

Query:   285 IIAADTFAFIGGKAFGRTQLTS-ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA 343
             I   D  A+  GK  G  ++   ISP KTW G   G+      +VV+S IF    ++  A
Sbjct:    86 IWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFGGIVAGAFISVVISVIF-GIFFVFHA 144

Query:   344 IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKT 403
              + G L  F +  GD+TES +KR   VKDSGS IPGHGGILDR+DS+IFT  L   +V+ 
Sbjct:   145 FIAGILIAFVAQVGDITESYVKRLCKVKDSGSFIPGHGGILDRMDSFIFTAPLVAYYVQK 204

Query:   404 F 404
             F
Sbjct:   205 F 205

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

TIGR_CMR|CBU_1381 CBU_1381 "phosphatidate cytidylyltransferase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 236 (88.1 bits), Expect = 8.9e-20, P = 8.9e-20
 Identities = 63/175 (36%), Positives = 92/175 (52%)

Query:   224 LSSTIFGLFYCGYLPCFWVKLR-CGLSAPALNTGIG----VSWPILLGGLPHWTVGLVAT 278
             ++S I  L+    + C+ + +   G   PA+   +G    +S  + +  L     G    
Sbjct:    83 IASVILWLWAAVAIFCYAIYIAPLGFQYPAVKLIVGFFALISCWLAINALREDIGGPGWL 142

Query:   279 LISFSSIIAADTFAFIGGKAFGR-TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWP 337
             L     + + DT A+  G+ +G+ T +  +SPKKTWEG   G+   +   V+   +F  P
Sbjct:   143 LFGLMLVWSMDTGAYAAGRLWGKHTLIARVSPKKTWEGLGGGIILSLLIAVIGGILFHLP 202

Query:   338 -RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
                L   I+   +  F +V GDL ESM+KR AGVKDSG L+PGHGGILDRVDS I
Sbjct:   203 FSQLSLVILLALITVFFAVIGDLFESMLKRQAGVKDSGRLLPGHGGILDRVDSLI 257

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

UNIPROTKB|P0ABG1 cdsA "CDP-diglyceride synthetase" [Escherichia coli K-12 (taxid:83333)]

 Score = 230 (86.0 bits), Expect = 4.6e-19, P = 4.6e-19
 Identities = 56/125 (44%), Positives = 76/125 (60%)

Query:   270 HWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTV 328
             H++ G +  L     +  AD+ A++ GK FG+ +L   +SP KTW+G I GL    AT  
Sbjct:   147 HYS-GAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAA 201

Query:   329 VLSKIF-CWPRY--LP-SAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGIL 384
             V+S  +  W      P + ++   +    SV GDLTESM KR+AG+KDSG LIPGHGGIL
Sbjct:   202 VISWGYGMWANLDVAPVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGIL 261

Query:   385 DRVDS 389
             DR+DS
Sbjct:   262 DRIDS 266

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016024 "CDP-diacylglycerol biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016779 "nucleotidyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

TIGR_CMR|CJE_1536 CJE_1536 "phosphatidate cytidylyltransferase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 221 (82.9 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 63/164 (38%), Positives = 86/164 (52%)

Query:   228 IFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIA 287
             +FG+     +  + V  +  L  PAL   I  S PIL     +   G+ A       + A
Sbjct:    73 LFGILALLLVVGYLVYKKASLK-PAL-IYIYPSLPILALWQVYLDQGMFALFWLIIIVAA 130

Query:   288 ADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFG 347
              D+ A+  GK  G+T  +  SP KT EG I GL  C +    +  +F +  +L     F 
Sbjct:   131 CDSGAYFIGKLMGKTPFSPTSPNKTLEGVIGGLI-CASVIGTILGVFVYSFWLSLLCSF- 188

Query:   348 FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
             F+  F +V GDL ES  KR+AGVKDSG LIPGHGG+LDR+D+ I
Sbjct:   189 FVAIF-AVIGDLLESYFKREAGVKDSGDLIPGHGGMLDRIDAVI 231

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1916 GSU_1916 "phosphatidate cytidylyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 218 (81.8 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 64/159 (40%), Positives = 90/159 (56%)

Query:   248 LSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQL-TS 306
             L  P L T +  +W   L  LP   VG +  ++    +++ DT A+  G   GR +L  S
Sbjct:   123 LYVPLLLTHL--AW---LRALPDG-VGWIFLVLVI--VMSGDTAAYYVGSNLGRRKLYPS 174

Query:   307 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY-----LPSAIVFGFLNFFGSVFGDLTE 361
             +SP K+ EG I GL G +A T V    F +P       + +A++ G L   G V GDL E
Sbjct:   175 VSPNKSVEGAIGGLLGSLAGTFVARLTF-FPGLTVLDCIATALLLGVL---GQV-GDLFE 229

Query:   362 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF 400
             S++KR  GVKDSG+++PGHGGILDR+DS +F    AY +
Sbjct:   230 SLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYY 268

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|SO_1634 SO_1634 "phosphatidate cytidylyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 214 (80.4 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 54/131 (41%), Positives = 77/131 (58%)

Query:   269 PHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATT 327
             P++   LV  L+    + AAD+ A+  GKA G+T+L  ++SP KT EG    LGG + T 
Sbjct:   150 PYYGASLV--LLVMLIVWAADSGAYFVGKAVGKTKLMPAVSPAKTLEGL---LGGLVTTL 204

Query:   328 VVLSKIFCWPRYLPSAIVFGFLNFFG--SVFGDLTESMIKRDAGVKDSGSLIPGHGGILD 385
             +V++ +          +V     F    S  GDL+ESM KR A +KDSG+++PGHGG+LD
Sbjct:   205 IVVAGVMVISPEQELGLVVAVTLFVALISALGDLSESMFKRAACIKDSGTILPGHGGVLD 264

Query:   386 RVDSYIFTGAL 396
             R+DS   T AL
Sbjct:   265 RIDS--LTAAL 273

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.7.41	0.737
3rd Layer	2.7.7	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	410
PLN02953	403	PLN02953, PLN02953, phosphatidate cytidylyltransfe	0.0
pfam01148	259	pfam01148, CTP_transf_1, Cytidylyltransferase fami	6e-56
COG0575	265	COG0575, CdsA, CDP-diglyceride synthetase [Lipid m	4e-35
PRK11624	285	PRK11624, cdsA, CDP-diglyceride synthase; Provisio	3e-25
COG4589	303	COG4589, COG4589, Predicted CDP-diglyceride synthe	2e-22
PLN02594	342	PLN02594, PLN02594, phosphatidate cytidylyltransfe	2e-15
PRK04032	159	PRK04032, PRK04032, hypothetical protein; Provisio	8e-06

>gnl|CDD|178539 PLN02953, PLN02953, phosphatidate cytidylyltransferase

 Score =  533 bits (1374), Expect = 0.0
 Identities = 289/421 (68%), Positives = 322/421 (76%), Gaps = 29/421 (6%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MASF E+        +  TS   CPCR  S K LI     PP   +R+V    K   R  
Sbjct: 1   MASFAEL--------VLSTSRCTCPCRSFSKKPLI----LPPLSGLRLVGGDTKPLFRSG 48

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
              I   RR ++AVARAE D L D +  + ID  H L    ++V D   Q+KASQL+KR+
Sbjct: 49  LGPISVKRRFLTAVARAESDQLGDDDHAKEIDRIHDL----QNVEDK--QKKASQLKKRV 102

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FG+GIG+ VG VVLAGGW FTV  AA+VF+G+REYFELVRSRGIA GMTPPPRYVSRVC
Sbjct: 103 IFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELVRSRGIAKGMTPPPRYVSRVC 162

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MPILTLYFG ID+ VT AAF+VA+ALL+QRG+PRFAQLSST+FGLFYCGYLPCF
Sbjct: 163 SVICALMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPCF 222

Query: 241 WVKLRCGLSAPALNTG-----------IGVSWPILLGGLPHWTVGLVATLISFSSIIAAD 289
           WVKLRCGL+APALNTG           IG +WPILLGG  HWTVGLVATLISFS +IA D
Sbjct: 223 WVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIATD 282

Query: 290 TFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL 349
           TFAF+GGKAFGRT LTSISPKKTWEGT VGL GCIA T++LSK   WP+ L S+I FGFL
Sbjct: 283 TFAFLGGKAFGRTPLTSISPKKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGFL 342

Query: 350 NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYG 409
           NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYG
Sbjct: 343 NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYG 402

Query: 410 V 410
           V
Sbjct: 403 V 403

Length = 403

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family

 Score =  184 bits (469), Expect = 6e-56
 Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 31/288 (10%)

Query: 118 KRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVS 177
           +RI   + + +    ++  G  +F +  AA + +   E   L+R +  +         ++
Sbjct: 2   QRIITHIVLILIFLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSS-----RLLLLT 56

Query: 178 RVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYL 237
           R   +I   + +L +Y   +         V+ +  LL      + ++SST+  LFY G  
Sbjct: 57  RGLGLIFYLLGLLLVYGEGLLALFGLVLLVIPVLWLLVLPVLAYHRVSSTLLPLFYVG-- 114

Query: 238 PCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGK 297
                                    + L  + +   GL+  L+    + A+D  A+  GK
Sbjct: 115 -----------------------LFLSLLLITNPFFGLLWALLLILVVWASDIGAYFVGK 151

Query: 298 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVF 356
           AFG+ +L   ISP KTWEG + G    +   ++ S +         A++ G L      F
Sbjct: 152 AFGKHKLAPKISPNKTWEGFLGGFVAAVLVGLLFSLLLGPYPSPLHALLLGLLASLVGQF 211

Query: 357 GDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
           GDL ES  KRD G+KDSG LIPGHGGILDR+DS +F   + Y+F+  F
Sbjct: 212 GDLVESGFKRDFGIKDSGKLIPGHGGILDRLDSLLFAAPIFYAFLYIF 259

The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108. Length = 259

>gnl|CDD|223648 COG0575, CdsA, CDP-diglyceride synthetase [Lipid metabolism]

 Score =  130 bits (328), Expect = 4e-35
 Identities = 79/285 (27%), Positives = 117/285 (41%), Gaps = 30/285 (10%)

Query: 116 LRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRY 175
           L++R+   + + I     +L GG  F +       +   E +   R   +A      P  
Sbjct: 2   LKQRVITAIVLLILFLLALLVGGLYFALLVLLLAILAILEAYRANRFAVLA-----GPLI 56

Query: 176 VSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCG 235
           +     +    +    L     +  + F    +   +LL       +     +FGL Y G
Sbjct: 57  LGLPIDLGLVLLDGRRLLGDGKETLLGFLLGFLLGLVLLGVIYY-LSDSLFKLFGLLYVG 115

Query: 236 YLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIG 295
                               G+    P  LG L     GL+  L+ F  + A D  A+  
Sbjct: 116 V-------------------GLLALLPFRLGVLYS---GLILLLLLFLGVWAGDIGAYFV 153

Query: 296 GKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY-LPSAIVFGFLNFFG 353
           G+ FG+ +L   ISPKKTWEG I G  G +   V++  +       + + ++ G L    
Sbjct: 154 GRRFGKHKLAPKISPKKTWEGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILGLLLVLT 213

Query: 354 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 398
           S  GDL ES IKR  G+KDSG LIPGHGGILDR DS +F     +
Sbjct: 214 SQLGDLFESYIKRLLGIKDSGWLIPGHGGILDRFDSLLFVAVYLF 258

Length = 265

>gnl|CDD|183240 PRK11624, cdsA, CDP-diglyceride synthase; Provisional

 Score =  103 bits (259), Expect = 3e-25
 Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 13/110 (11%)

Query: 287 AADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIV 345
            AD+ A++ GK FG+ +L   +SP KTWEG I GL    AT  V+S +F    + P  + 
Sbjct: 163 GADSGAYMFGKLFGKHKLAPKVSPGKTWEGFIGGL----ATAAVISWLF--GMWAPLDVA 216

Query: 346 FGFL------NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
              L          SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 217 PVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Length = 285

>gnl|CDD|226955 COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]

 Score = 96.3 bits (240), Expect = 2e-22
 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 7/119 (5%)

Query: 289 DTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCW--PRYLPSAIV 345
           D   ++ GK+FG+ ++   +SP KT EG I    G I TT++ S I     P     A++
Sbjct: 187 DVAQYVWGKSFGKRKIVPKVSPNKTVEGLI----GGILTTMIASAILGLLTPLNTLQALL 242

Query: 346 FGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
            G L       GDL  S IKRD GVKDSG L+PGHGGILDRVDS IFT  + + F++  
Sbjct: 243 AGLLIGLSGFCGDLVMSAIKRDVGVKDSGKLLPGHGGILDRVDSLIFTAPIFFHFIRYC 301

Length = 303

>gnl|CDD|215322 PLN02594, PLN02594, phosphatidate cytidylyltransferase

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 57/180 (31%), Positives = 73/180 (40%), Gaps = 52/180 (28%)

Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTV---VL 330
           G+   L+  S I+  D  A++ G  FGRT L  +SPKKTWEG I   G  + T +    L
Sbjct: 123 GIFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFI---GASVTTLISAFYL 179

Query: 331 SKI---FCW---PR---------------------YLPSAIVFGF--------------- 348
           + I   F W   PR                      LP  I   F               
Sbjct: 180 ANIMGKFQWLTCPRKDLSTGWLECDPDPLFKPETYPLPGWIPRWFPWKEVSVLPVQWHAL 239

Query: 349 -LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
            L  F S+   FG    S  KR   +KD G  IPGHGGI DR+D  +     AY + ++F
Sbjct: 240 SLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSF 299

Length = 342

>gnl|CDD|235207 PRK04032, PRK04032, hypothetical protein; Provisional

 Score = 45.2 bits (108), Expect = 8e-06
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 311 KTWEGTIVGLGGCIATTVVLSKIFCWPRY-LPSAIVFGFLNFFGSVFGDLTESMIKRDAG 369
           KTW G I G+       ++ + +       L  AI+  FL  FG++ GD+  S IKR  G
Sbjct: 37  KTWRGLIGGILFGTLVGLIQNLLVPAYIGALGVAIILAFLLSFGALLGDMLGSFIKRRLG 96

Query: 370 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
           ++           +LD++D  +     AY     +
Sbjct: 97  LERGAPAP-----LLDQLDFVVGALLFAYLVAPVW 126

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	410
PLN02953	403	phosphatidate cytidylyltransferase	100.0
PRK11624	285	cdsA CDP-diglyceride synthase; Provisional	100.0
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	100.0
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	100.0
COG4589	303	Predicted CDP-diglyceride synthetase/phosphatidate	100.0
KOG1440	432	consensus CDP-diacylglycerol synthase [Lipid trans	100.0
PLN02594	342	phosphatidate cytidylyltransferase	100.0
PRK04032	159	hypothetical protein; Provisional	99.96
PF01864	175	DUF46: Putative integral membrane protein DUF46; I	99.32
KOG4453	269	consensus Predicted ER membrane protein [Function	97.93
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	97.18
KOG2468	510	consensus Dolichol kinase [Lipid transport and met	95.65
KOG1440	432	consensus CDP-diacylglycerol synthase [Lipid trans	92.62
COG1836	247	Predicted membrane protein [Function unknown]	88.17
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	84.42
TIGR01594	107	holin_lambda phage holin, lambda family. This mode	83.63
TIGR00297	237	conserved hypothetical protein TIGR00297.	80.5

>PLN02953 phosphatidate cytidylyltransferase

Probab=100.00  E-value=1.3e-101  Score=774.30  Aligned_cols=392  Identities=72%  Similarity=1.174  Sum_probs=330.7

Q ss_pred             CccchhhcccCcccccccccccCCCCCCCCCcceeeccCCCCCccceeeccCCceeeeeccccccchhhHHHHHhhcCCC
Q 015272            1 MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPD   80 (410)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (410)
                      ||+|+|+        +++||+|||||||+|||+||+||+|+    +|++-.|+||+||+|+|++|++||++|||||||||
T Consensus         1 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (403)
T PLN02953          1 MASFAEL--------VLSTSRCTCPCRSFSKKPLILPPLSG----LRLVGGDTKPLFRSGLGPISVKRRFLTAVARAESD   68 (403)
T ss_pred             CchHHHH--------HHHhhhccCcCCCCCcCceecCcccc----cccCCCCCccccccCCCchhHHHHHHHHHHHhhhh
Confidence            8999999        99999999999999999999999997    56777799999999999999999999999999999


Q ss_pred             CCCCCcccccccCCCccccccCCcCCccchhHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 015272           81 HLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELV  160 (410)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~s~L~~RIiTalvl~~lv~~i~~~g~~~f~ll~~~l~~lgl~E~~~l~  160 (410)
                      |+|||||+||+||+||+||+|+      ||++.+|+++|++||++++++++.+++.|+|+|.+++++++.++++||++|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~RIiSglvl~~l~l~vV~~GGw~F~~~va~iv~lg~~E~frmv  142 (403)
T PLN02953         69 QLGDDDHAKEIDRIHDLQNVED------KQKKASQLKKRVIFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELV  142 (403)
T ss_pred             hccCCCccchhhhhcccccccc------cccccccHHHHHHHHHHHHHHHHheeeeCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999977      8888999999999999998888888899999999999999999999999999


Q ss_pred             HhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHhHHHHH
Q 015272          161 RSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF  240 (410)
Q Consensus       161 ~~~g~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~tl~Gi~Yi~~~~s~  240 (410)
                      +.+++.+...+++.+....+.+.+..++...++.+.....+....+.++...+.++++.++++++.+++|++|++++++|
T Consensus       143 ~~~gi~p~~~~~~~~~~~~g~v~~~~~~v~~~~~g~~~~~l~l~~~~i~~~ll~~~~~~~~~di~~s~fgl~Yig~lpsf  222 (403)
T PLN02953        143 RSRGIAKGMTPPPRYVSRVCSVICALMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPCF  222 (403)
T ss_pred             HhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            98888655433444433333233344444433333222222222233333445566666889999999999999999999


Q ss_pred             HHHHhhccCcccc-----------ccCCCcccccccCCCcchhhHHHHHHHHHHHHHHhhHHHHHHhhhcCCccccccCC
Q 015272          241 WVKLRCGLSAPAL-----------NTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISP  309 (410)
Q Consensus       241 li~Lr~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~~ISP  309 (410)
                      |+++|+....++.           +...+..|+..+++..+|..++.+++++++++|+||++||++||.|||||+++|||
T Consensus       223 ~v~Lr~~~~~~~~~~~~~~~f~~l~~~~~~~~p~~~~~~~~~~~Gl~~~l~~~~~vw~~Di~AY~~G~~fGk~kl~~ISP  302 (403)
T PLN02953        223 WVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKAFGRTPLTSISP  302 (403)
T ss_pred             HHHHhhccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCC
Confidence            9999952211111           11123456665666667878899999999999999999999999999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhH
Q 015272          310 KKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS  389 (410)
Q Consensus       310 kKTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DS  389 (410)
                      ||||||++||++++++++.+++.++.++..+++.+++|++++++|++|||+||++||++||||||+++|||||+|||+||
T Consensus       303 kKTwEG~iGGil~~vlv~~l~~~~l~~~~~~~~~i~lg~li~~~~~~GDL~eS~iKR~~gVKDsG~liPGHGGiLDR~DS  382 (403)
T PLN02953        303 KKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS  382 (403)
T ss_pred             CCeeeeehhHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHhhHHHHHHHhHccCCCCccccCCCCCcchhhHhH
Confidence            99999999999999999998887776666677788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcccCC
Q 015272          390 YIFTGALAYSFVKTFLPLYGV  410 (410)
Q Consensus       390 lLFaaPv~y~~~~~~~~~~~~  410 (410)
                      ++|++|++|++++..+|+|||
T Consensus       383 llfaaPv~y~~~~~~~~~~~~  403 (403)
T PLN02953        383 YIFTGALAYSFIKTSLKLYGV  403 (403)
T ss_pred             HHHHHHHHHHHHHHhccccCC
Confidence            999999999999999999997

>PRK11624 cdsA CDP-diglyceride synthase; Provisional

Probab=100.00  E-value=4.5e-59  Score=458.27  Aligned_cols=266  Identities=27%  Similarity=0.323  Sum_probs=180.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHH-HHH
Q 015272          115 QLRKRIGFGLGIGIFVGGVVL-AGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPI-LTL  192 (410)
Q Consensus       115 ~L~~RIiTalvl~~lv~~i~~-~g~~~f~ll~~~l~~lgl~E~~~l~~~~g~~~~~~~~~~~~~~v~~~~~~~i~~-~~~  192 (410)
                      ||++|++||++++++++..++ .|++.|.+++++++++|+|||++|.+.++...     ........+........ ...
T Consensus         1 ml~~Riita~vlv~l~l~~i~~~~~~~f~~l~~~~~~l~~~E~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~   75 (285)
T PRK11624          1 MLKYRLITAFILIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWGQLSGFASRSQ-----RVWLAVLCGLLLALMLFLLPE   75 (285)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccch-----hHHHHHHHHHHHHHHHHHHHH
Confidence            588999999987766666554 46799999999999999999999987654321     11111111111111100 000


Q ss_pred             hhhh--hHHH----HHHHHHH-HHHHHHHhcCC-ch-hhh--HHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCccc
Q 015272          193 YFGQ--IDVS----VTFAAFV-VAMALLLQRGN-PR-FAQ--LSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSW  261 (410)
Q Consensus       193 ~~~~--~~~~----~~~~~f~-~~~~~~~~~~~-~~-~~~--~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~  261 (410)
                      +...  ....    .....++ ++......+.+ .. ..+  ...+.+|.+|+...+.+++.+|... .+. +..+    
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~-~~~-~~~~----  149 (285)
T PRK11624         76 YHHNIHQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWH-YDE-NHYS----  149 (285)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHccc-ccc-cccC----
Confidence            1000  0000    0011111 11111222221 11 222  3456788888766555566677410 000 0000    


Q ss_pred             ccccCCCcchhhHHHHHHHHHHHHHHhhHHHHHHhhhcCCcccc-ccCCCCCchhhHHHHHHHHHHHHHHHHHhccCcch
Q 015272          262 PILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYL  340 (410)
Q Consensus       262 ~~~~~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~-~ISPkKTwEG~iGGil~avl~~~l~~~~~~~~~~~  340 (410)
                             +.     .+++++++++|+|||+|||+||.||||||+ +|||||||||++||++++++++.+++.+...+.++
T Consensus       150 -------G~-----~~vl~l~~~vw~sDt~AYf~Gr~fGk~KL~P~ISPkKTwEG~iGg~~~~~~~~~~~~~~~~~~~~~  217 (285)
T PRK11624        150 -------GA-----WWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGFIGGLATAAVISWLFGMWAPLDVAP  217 (285)
T ss_pred             -------CH-----HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchhhhHHHHHHHHHHHHHHHHHHcccccH
Confidence                   11     223567788999999999999999999996 99999999999999999999998887665433456


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Q 015272          341 PSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKT  403 (410)
Q Consensus       341 ~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DSlLFaaPv~y~~~~~  403 (410)
                      +++++++++++++||+|||+||++||++||||||+++|||||+|||+||++|++|++|++...
T Consensus       218 ~~~~~~~~~~~~~~~~GDL~ES~lKR~~gVKDSG~llPGHGGiLDR~DSLlfa~P~~~~~~~~  280 (285)
T PRK11624        218 VTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLL  280 (285)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhhccCCCCCcCcCCCcCcchhhHhHHHHHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999999999999999999998876554

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=100.00  E-value=5.7e-49  Score=382.98  Aligned_cols=257  Identities=31%  Similarity=0.437  Sum_probs=178.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHh-
Q 015272          115 QLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLY-  193 (410)
Q Consensus       115 ~L~~RIiTalvl~~lv~~i~~~g~~~f~ll~~~l~~lgl~E~~~l~~~~g~~~~~~~~~~~~~~v~~~~~~~i~~~~~~-  193 (410)
                      |+++|++++.++.......++.++++|.++..++++.+.||++++.+.+....     +........   ....+.... 
T Consensus         1 ~~~~r~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~   72 (265)
T COG0575           1 MLKQRVITAIVLLILFLLALLVGGLYFALLVLLLAILAILEAYRANRFAVLAG-----PLILGLPID---LGLVLLDGRR   72 (265)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccch-----hHHHHHHHH---HHHHHHHHHH
Confidence            57899999987765555555555999999999999999999999988765431     111111111   111111111 


Q ss_pred             -hhhhH-HHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCcccccccCCCcch
Q 015272          194 -FGQID-VSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHW  271 (410)
Q Consensus       194 -~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~~~~~~~~  271 (410)
                       .+... ........+....... .....+.+......+..|.++.+......|....                      
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  129 (265)
T COG0575          73 LLGDGKETLLGFLLGFLLGLVLL-GVIYYLSDSLFKLFGLLYVGVGLLALLPFRLGVL----------------------  129 (265)
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHH-HhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHhhh----------------------
Confidence             11111 1111111111110111 1112234444566778888776655555543100                      


Q ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHhhhcCCcccc-ccCCCCCchhhHHHHHHHHHHHHHHHHHhc-cCcchHHHHHHHHH
Q 015272          272 TVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFC-WPRYLPSAIVFGFL  349 (410)
Q Consensus       272 ~~gl~~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~-~ISPkKTwEG~iGGil~avl~~~l~~~~~~-~~~~~~~~~llg~~  349 (410)
                      ..|..+++++++++|+||++|||+||+|||||++ +|||||||||++||++++++++........ .+.+++..++++++
T Consensus       130 ~~g~~~~l~l~~~vw~~Di~Ayf~Gr~fGk~kl~p~iSP~KT~eGfigG~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~  209 (265)
T COG0575         130 YSGLILLLLLFLGVWAGDIGAYFVGRRFGKHKLAPKISPKKTWEGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILGLL  209 (265)
T ss_pred             hhhHHHHHHHHHHHHHHhhhHHHHHHHcCCCCCCCcCCCCCchHHhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            0133455678899999999999999999999996 899999999999999999998888776654 34456778899999


Q ss_pred             HHHHHhHHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 015272          350 NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  404 (410)
Q Consensus       350 ~~v~~~iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DSlLFaaPv~y~~~~~~  404 (410)
                      +++++|+|||+||++||++||||||+++|||||+|||+||++++  ++|++..++
T Consensus       210 ~~l~~~lGDL~eS~iKR~~gvKDsg~liPGHGGilDR~Dsl~~~--~~~~~~~~~  262 (265)
T COG0575         210 LVLTSQLGDLFESYIKRLLGIKDSGWLIPGHGGILDRFDSLLFV--AVYLFLLLF  262 (265)
T ss_pred             HHHHHHHhhHHHHHHHHccCCCCcCCCCCCcCcccccHhhHHHH--HHHHHHHHH
Confidence            99999999999999999999999999999999999999999999  666666543

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=100.00  E-value=1.5e-48  Score=371.93  Aligned_cols=258  Identities=33%  Similarity=0.514  Sum_probs=185.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHhhhh
Q 015272          117 RKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQ  196 (410)
Q Consensus       117 ~~RIiTalvl~~lv~~i~~~g~~~f~ll~~~l~~lgl~E~~~l~~~~g~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~~~  196 (410)
                      |||++|++++.++++..++.+++.+..++.++..++.+|++++.+.++.+..     ...................+...
T Consensus         1 k~Ri~t~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   75 (259)
T PF01148_consen    1 KQRIITAIILIPIFILLLFLGPWYFLLLVAVIIFLGFWELFRLFRIKSRSKF-----RLIIRILSWIFFLILFLFFYLRW   75 (259)
T ss_pred             CEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccch-----hhHHHHHHHHHHHHHHHHhhhhH
Confidence            6899999988888888888899999999999999999999999887654321     11111111111111111111111


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCcccccccCCCcchhhHHH
Q 015272          197 IDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLV  276 (410)
Q Consensus       197 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~~~~~~~~~~gl~  276 (410)
                      .................+...+.+.++...+.++.+|+++..........         .           .+.     .
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----------~~~-----~  130 (259)
T PF01148_consen   76 LIPYFFATILIIALLLFLVLGERRIRRIISTLFGLIYFGIFLLLLLIFFW---------F-----------FGP-----P  130 (259)
T ss_pred             HHHHHHHHHHHHhhhHHhhhcchHHHHHHHHHHHHHHHhHHHHHHHhhhh---------c-----------cch-----H
Confidence            11111111111122222222234566777888899888876522211110         0           011     1


Q ss_pred             HHHHHHHHHHHhhHHHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHh
Q 015272          277 ATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWP-RYLPSAIVFGFLNFFGSV  355 (410)
Q Consensus       277 ~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~~~-~~~~~~~llg~~~~v~~~  355 (410)
                      ..+..+.++|.+|++||++||.||||+.+++||||||||++||++++++++.+...+...+ .+++..+++++++++.++
T Consensus       131 ~~~~~i~~~~~gD~~A~l~G~~fGk~~~~~~sp~KT~EGsi~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  210 (259)
T PF01148_consen  131 LALIGILILGIGDSFAYLVGRRFGKHLAPKISPKKTWEGSIAGFISSFIISFLLLYYLSSFFLSWWQAILISLLASIVEA  210 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCCCHHHHhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHH
Confidence            2235667899999999999999999944589999999999999999999988887766543 567888899999999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 015272          356 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  404 (410)
Q Consensus       356 iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DSlLFaaPv~y~~~~~~  404 (410)
                      +|||+||.+||++||||||+++|||||+|||+||+++++|++|+++++|
T Consensus       211 ~gdl~~S~~KR~~~iKD~g~lipghGg~lDr~d~~l~~~~~~~~~~~~f  259 (259)
T PF01148_consen  211 FGDLFESAIKRDAGIKDSGNLIPGHGGILDRFDSLLFAAPVFYILLKIF  259 (259)
T ss_pred             HHHHHHHHHHHhhhcccccccccCcCCcccchHhHHHHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999999999999874

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]

Probab=100.00  E-value=2.5e-47  Score=360.39  Aligned_cols=262  Identities=29%  Similarity=0.434  Sum_probs=206.6

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015272          112 KASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILT  191 (410)
Q Consensus       112 ~~s~L~~RIiTalvl~~lv~~i~~~g~~~f~ll~~~l~~lgl~E~~~l~~~~g~~~~~~~~~~~~~~v~~~~~~~i~~~~  191 (410)
                      ...|++.||-+.+++++++..++..|.|.-..+++.+++.+++||.++...+--+        ....+  .++..+|+.+
T Consensus        32 ~~~~l~~RI~aWW~mv~i~~~~~~l~~~~~l~lF~~iSflalrEfltl~ptr~~d--------~~~l~--~~Y~~lplqy  101 (303)
T COG4589          32 KIDELNLRIRAWWVMVIIFSLVISLPRWMTLTLFGLISFLALREFLTLIPTRRPD--------HLALV--WFYWVLPLQY  101 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcccccCC--------ccchh--hhhhhhhHhH
Confidence            4678999999999998888888888999999999999999999999998765322        11111  3466788776


Q ss_pred             Hhh--hhhH---HHHHHHHHHHHHHHHHhcCCc-hh-hhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCcccccc
Q 015272          192 LYF--GQID---VSVTFAAFVVAMALLLQRGNP-RF-AQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPIL  264 (410)
Q Consensus       192 ~~~--~~~~---~~~~~~~f~~~~~~~~~~~~~-~~-~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~  264 (410)
                      ++.  +.+.   ..+..+.|+++.......+++ .| .+.+.-.+|.+-..+..|+...+-.   .+..+...|      
T Consensus       102 ~~i~i~wy~mf~ifipvY~fL~Lp~l~~L~gdt~gFl~~~s~i~wg~mltvfcish~~~llt---L~~~~~~~~------  172 (303)
T COG4589         102 LLIGIDWYEMFIIFIPVYGFLILPILMVLVGDTSGFLHRVSAIQWGWMLTVFCISHAAYLLT---LDITNFQGG------  172 (303)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHhHHHHHHHHHHHHHHHhhHHHhh---CCCCCcCcc------
Confidence            543  2222   234556666665555555554 34 4456667888888888888765543   111111111      


Q ss_pred             cCCCcchhhHHHHHHHHHHHHHHhhHHHHHHhhhcCCcccc-ccCCCCCchhhHHHHHHHHHHHHHHHHHhccCcchHHH
Q 015272          265 LGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA  343 (410)
Q Consensus       265 ~~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~-~ISPkKTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~  343 (410)
                               .+ ++++.++++..||+.+|..||.|||||.+ ++||||||||++||++.+++++.++.++  .|.+++++
T Consensus       173 ---------~l-l~iflli~~q~nDV~QYvwGk~fGk~Ki~P~vSPnKTveGl~GGilt~~~~~~~l~~l--Tp~~~lqa  240 (303)
T COG4589         173 ---------AL-LVIFLLILTELNDVAQYVWGKSFGKRKIVPKVSPNKTVEGLIGGILTTMIASAILGLL--TPLNTLQA  240 (303)
T ss_pred             ---------ch-HHHHHHHHHHHHHHHHHHHhhhcCCcccCCCcCCcchHHHHhhhHHHHHHHHHHHHHh--CCCcHHHH
Confidence                     12 33556778999999999999999999996 9999999999999999999999888743  47889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 015272          344 IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  404 (410)
Q Consensus       344 ~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DSlLFaaPv~y~~~~~~  404 (410)
                      ++.|+++++.|.+||++.|++||+.||||||+++|||||+|||+||++||||+++++.+++
T Consensus       241 ~~~~~~I~l~GF~GdlvmSaiKRd~gvKD~G~li~GHGGiLDR~DSL~FtAPiffh~~ry~  301 (303)
T COG4589         241 LLAGLLIGLSGFCGDLVMSAIKRDVGVKDSGKLLPGHGGILDRVDSLIFTAPIFFHFIRYC  301 (303)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhhcCCCcccccCCCCccHHHHHHHHHHhhhHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999874

>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism]

Probab=100.00  E-value=9.7e-46  Score=370.70  Aligned_cols=317  Identities=28%  Similarity=0.298  Sum_probs=232.5

Q ss_pred             CCCcceeeccCCCCCccceeeccCCceeee-eccccccchhhHHHHHhhcCCCCCCCCcccccccCCCc-cccccCCcCC
Q 015272           29 SSNKILIFTQKQPPKLNVRIVFNRPKFTLR-VRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHK-LVVSEKSVSD  106 (410)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  106 (410)
                      ..+|  +.++.|+    -|. |.+-||+++ .|..|++..||.+++++++|.+++++++++++++.++. +|++++...=
T Consensus        35 ~~~~--~~~~~s~----~~~-p~~~~~~l~~~~~~~~n~~~R~i~t~~mi~~f~~i~~~g~~~~~~lv~~iQi~~~~Eii  107 (432)
T KOG1440|consen   35 RTRK--IRPPVSK----DRT-PVRLKPLLSALRSRWKNFFRRGILTLAMISGFFLIIYMGHKYLMALVLVIQIKCFKEII  107 (432)
T ss_pred             cccc--cCCCCCC----CCC-cccchhhhhhCCCCceeeehHHHHHHHHHhccEEEEecCcchhhhhhhhHHHHHHHHHH
Confidence            4455  5555553    123 456688884 88999999999999999999999999999999999966 8888774431


Q ss_pred             ccchhHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHH
Q 015272          107 SGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAF  186 (410)
Q Consensus       107 s~~~~~~s~L~~RIiTalvl~~lv~~i~~~g~~~f~ll~~~l~~lgl~E~~~l~~~~g~~~~~~~~~~~~~~v~~~~~~~  186 (410)
                      + .+++.++.++|..+.++....+....+.+.+.+....+..++..-.|++++++..++    ..+..|+...+..++.+
T Consensus       108 ~-i~~~~~~~k~lp~f~~l~w~fl~t~~yf~yg~~~~~yf~~v~~~~~~l~~LV~yh~f----i~f~lYi~gf~~FV~sL  182 (432)
T KOG1440|consen  108 A-IGRKVSREKDLPWFRLLNWYFLLTVNYFVYGEILVAYFAAVFIRDRFLFFLVRYHRF----ICFALYLIGFVSFVLSL  182 (432)
T ss_pred             H-HhhccccccCCceeehhhhHHHHHHHHHHhHHHHHHHHHHHHhhhHHHHHHHHhccc----ccHHHHHHHHHHHHHHh
Confidence            1 355666778888888777666667777778877777777778899999999985433    34455554444333333


Q ss_pred             HH-HHHHhhhhhHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCccccccc
Q 015272          187 MP-ILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILL  265 (410)
Q Consensus       187 i~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~~  265 (410)
                      .+ .+..++++.++.-..+++++..                            ++++ ++.        ..         
T Consensus       183 ~k~~yk~QFg~fawtH~sll~Vv~q----------------------------s~l~-i~N--------~f---------  216 (432)
T KOG1440|consen  183 RKGIYKLQFGLFAWTHMSLLLVVTQ----------------------------SHLV-IQN--------LF---------  216 (432)
T ss_pred             hhhhhHHHHHhHHHHHHHHHHHHHH----------------------------HHHH-Hhc--------cc---------
Confidence            33 2222333333221111111111                            1111 111        00         


Q ss_pred             CCCcchhhHHHHHHHHHHHHHHhhHHHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhcc---------
Q 015272          266 GGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCW---------  336 (410)
Q Consensus       266 ~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~~---------  336 (410)
                             .|+.+.+....++..||..||.+|..|||+|+.++||||||||++||.++.++.+.+++.+++.         
T Consensus       217 -------eG~fWFl~P~~lvicnDi~AY~~Gf~fGktPLiklSPKKTwEGFiGg~~~tvv~~i~~s~vL~~~~~~~cp~~  289 (432)
T KOG1440|consen  217 -------EGLFWFLVPAGLVICNDIFAYLFGFFFGKTPLIKLSPKKTWEGFIGGTFGTVVFGILFSYVLGHYTFFTCPVK  289 (432)
T ss_pred             -------chHHHHHHHhHhheeCchHHHHHhhhhcCCcccccCCCCccchhhchhHHHHHHHHHHHHHhccCeEEEeccc
Confidence                   1334445677788899999999999999999999999999999999988888777777654310         


Q ss_pred             -----------------------C---------------cchHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCC
Q 015272          337 -----------------------P---------------RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIP  378 (410)
Q Consensus       337 -----------------------~---------------~~~~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLP  378 (410)
                                             |               ...++.+.+|++.++.|.+||++||++||+++|||+|+.||
T Consensus       290 d~~t~~~~~c~p~~~F~~~~y~lp~~i~~~i~~k~is~~p~~~Hsial~~faS~iaPFGGFfASgfKRafKiKDFG~~IP  369 (432)
T KOG1440|consen  290 DFSTTPLLSCEPKPLFEPQTYGLPGVISITIRLKSISLPPFQFHSIALGLFASFIAPFGGFFASGFKRAFKIKDFGDSIP  369 (432)
T ss_pred             ccCCCCccccCcccccCcceecCCceeeeeccccccccchHHHHHHHHHHHHHhhccchhHHHHHhHHhhcCCcccccCC
Confidence                                   0               02467889999999999999999999999999999999999


Q ss_pred             CCcchhhhhhHHHHHHHHHHHHHHHHhcccCC
Q 015272          379 GHGGILDRVDSYIFTGALAYSFVKTFLPLYGV  410 (410)
Q Consensus       379 GHGGvLDR~DSlLFaaPv~y~~~~~~~~~~~~  410 (410)
                      ||||++||+|+.++++-++|.|.+-++..+++
T Consensus       370 GHGGI~DR~DCQ~lma~Fay~Yi~SFI~~~~~  401 (432)
T KOG1440|consen  370 GHGGITDRMDCQILMATFAYVYIQSFIRLPGV  401 (432)
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHHhccCCH
Confidence            99999999999999999999999988876653

>PLN02594 phosphatidate cytidylyltransferase

Probab=100.00  E-value=4.5e-45  Score=362.94  Aligned_cols=162  Identities=33%  Similarity=0.435  Sum_probs=139.7

Q ss_pred             chhhhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCcccccccCCCcchhhHHHHHHHHHHHHHHhhHHHHHHhhh
Q 015272          219 PRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKA  298 (410)
Q Consensus       219 ~~~~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~~~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvGr~  298 (410)
                      ..+.+.+.+.++++|+++..++++. .         ..+                |+.++++.+++||+||++||++||.
T Consensus        94 ~qf~~~a~t~~~llyV~~~~~~ii~-n---------i~~----------------G~~w~~l~~~lV~~nDi~AY~~G~~  147 (342)
T PLN02594         94 YQFGQYAWTHMILIVVFTQSSFTVA-N---------IFE----------------GIFWFLLPASLIVINDIAAYLFGFF  147 (342)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHH-H---------ccc----------------cHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            4678999999999999998887752 1         111                3344567788999999999999999


Q ss_pred             cCCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhcc------C-----------------------------------
Q 015272          299 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCW------P-----------------------------------  337 (410)
Q Consensus       299 fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~~------~-----------------------------------  337 (410)
                      ||||||++|||||||||++||++++++++.+++.++..      |                                   
T Consensus       148 fGk~kL~~iSPkKTwEGfiGg~i~T~i~~~~~~~~~~~~~~~~cp~~~~~~~~~~C~p~~~f~~~~~~~p~~~~~~~~~~  227 (342)
T PLN02594        148 FGRTPLIKLSPKKTWEGFIGASVTTLISAFYLANIMGKFQWLTCPRKDLSTGWLECDPDPLFKPETYPLPGWIPRWFPWK  227 (342)
T ss_pred             hcCCCCCccCCCCchhhhHHHHHHHHHHHHHHHHHhcccccccCCccccccCcccCCCccccccccccCCcccccccccc
Confidence            99999999999999999999999999999988765310      0                                   


Q ss_pred             -cc----hHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHhc
Q 015272          338 -RY----LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLP  406 (410)
Q Consensus       338 -~~----~~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLPGHGGvLDR~DSlLFaaPv~y~~~~~~~~  406 (410)
                       .+    .++++++|++++++|++||++||++||++||||+|+++|||||+|||+||+++++|++|++...++.
T Consensus       228 ~i~~~~~~~h~l~l~l~aSl~a~fGdlfaS~~KR~~~IKDfG~~IPGHGGilDRfDs~l~~~~f~y~y~~~fi~  301 (342)
T PLN02594        228 EVSVLPVQWHALSLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSFIV  301 (342)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhhhHHHHHHHHccCCCcccCccCCCccccccccHHHHHHHHHHHHHHHHhc
Confidence             01    4678899999999999999999999999999999999999999999999999999999988887763

>PRK04032 hypothetical protein; Provisional

Probab=99.96  E-value=1e-29  Score=229.30  Aligned_cols=101  Identities=30%  Similarity=0.457  Sum_probs=88.4

Q ss_pred             hhhc-CCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCC
Q 015272          296 GKAF-GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWP-RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDS  373 (410)
Q Consensus       296 Gr~f-GKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~~~-~~~~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDS  373 (410)
                      ||+| ++||+  +||||||||++||++++++++.+++++...+ .++++++++|++++++||+|||+||++||++|||| 
T Consensus        23 g~~~~dg~~i--iSP~KTwEG~iGGv~~~~l~~~~~~~~~~~~~~~~~~~~~~g~li~v~~~~GDL~eS~iKR~~gVKD-   99 (159)
T PRK04032         23 GKTFVDGRRI--LGDGKTWRGLIGGILFGTLVGLIQNLLVPAYIGALGVAIILAFLLSFGALLGDMLGSFIKRRLGLER-   99 (159)
T ss_pred             CCcCCCCCee--CCCCCcHHHhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCC-
Confidence            6777 55555  9999999999999999999999987765432 24566889999999999999999999999999999 


Q ss_pred             CCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Q 015272          374 GSLIPGHGGILDRVDSYIFTGALAYSFVKT  403 (410)
Q Consensus       374 G~lLPGHGGvLDR~DSlLFaaPv~y~~~~~  403 (410)
                      |+++|    +|||+||++|++|++|++..+
T Consensus       100 g~~iP----iLDRiDsll~a~p~~~l~~~l  125 (159)
T PRK04032        100 GAPAP----LLDQLDFVVGALLFAYLVAPV  125 (159)
T ss_pred             cCccc----chhhhHHHHHHHHHHHHHHhh
Confidence            88888    999999999999999987764

>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function

Probab=99.32  E-value=5.6e-12  Score=116.32  Aligned_cols=91  Identities=27%  Similarity=0.399  Sum_probs=74.2

Q ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHHhc-------cCcchHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCCCCCCCC
Q 015272          307 ISPKKTWEGTIVGLGGCIATTVVLSKIFC-------WPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPG  379 (410)
Q Consensus       307 ISPkKTwEG~iGGil~avl~~~l~~~~~~-------~~~~~~~~~llg~~~~v~~~iGDL~ES~iKR~aGVKDSG~lLPG  379 (410)
                      .=.+|||||+++|++++++++.+.+....       ...+....+..|++.++.+.+||+.-|.+||+.|++....    
T Consensus        44 lGdgKTwrG~i~gvl~g~l~g~i~~~l~~~~~~~~~~~~~~~~~~~~g~ll~~gamlGDl~~SFIKRRlgi~~G~~----  119 (175)
T PF01864_consen   44 LGDGKTWRGFIGGVLAGTLVGIIQGLLLPLSIFALYFYGSLFFNLLLGFLLGLGAMLGDLPGSFIKRRLGIPRGAP----  119 (175)
T ss_pred             cCCCCeEEeeeHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCCCc----
Confidence            56899999999999999999888765422       1223456678899999999999999999999999996654    


Q ss_pred             CcchhhhhhHHHHHHHHHHHHHH
Q 015272          380 HGGILDRVDSYIFTGALAYSFVK  402 (410)
Q Consensus       380 HGGvLDR~DSlLFaaPv~y~~~~  402 (410)
                       --++|.+|+++.+..+.|.+..
T Consensus       120 -ap~lDQldf~lgall~~~~~~~  141 (175)
T PF01864_consen  120 -APGLDQLDFVLGALLLLYLFAP  141 (175)
T ss_pred             -CccchhHHHHHHHHHHHHHHHh
Confidence             4678999999999887776543

It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.

>KOG4453 consensus Predicted ER membrane protein [Function unknown]

Probab=97.93  E-value=2.8e-05  Score=74.26  Aligned_cols=79  Identities=22%  Similarity=0.157  Sum_probs=57.4

Q ss_pred             HHHHHHHhhHHHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhc-c-C----cchHHHHHHHHHHHHHH
Q 015272          281 SFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFC-W-P----RYLPSAIVFGFLNFFGS  354 (410)
Q Consensus       281 ~~~~vw~sDtgAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~-~-~----~~~~~~~llg~~~~v~~  354 (410)
                      ++++-|. |+.|-.+||+||+.|.+ +.|||+|.|.+|...++++.++++-.++. . |    .+|-  .-+-....+.|
T Consensus       162 ~~Llswc-Dt~AdtvGRKfG~~tpk-~aknKSlAGSIgaft~Gvf~c~vy~gyf~s~g~~~l~~s~r--~~~~~l~l~~g  237 (269)
T KOG4453|consen  162 ISLLSWC-DTIADTVGRKFGSTTPK-YAKNKSLAGSIGAFTFGVFICIVYLGYFSSLGPDYLHMSWR--ETTLQLVLMVG  237 (269)
T ss_pred             HHHHHHh-hhHHHHHhhhccccCCC-cCCCccccchHHHHHHHHHHHHHHHHHHhccCcchhccccc--cchHHHHHHHH
Confidence            4456675 99999999999999854 67999999999999999999988765543 1 1    1220  11112344567


Q ss_pred             hHHHHHHHH
Q 015272          355 VFGDLTESM  363 (410)
Q Consensus       355 ~iGDL~ES~  363 (410)
                      .++-++||+
T Consensus       238 ~vaAlvEsl  246 (269)
T KOG4453|consen  238 MVAALVESL  246 (269)
T ss_pred             HHHHHHhcC
Confidence            778889986

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=97.18  E-value=0.0014  Score=62.70  Aligned_cols=45  Identities=27%  Similarity=0.380  Sum_probs=38.6

Q ss_pred             HHHhhHHHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHH
Q 015272          285 IIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVL  330 (410)
Q Consensus       285 vw~sDtgAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~  330 (410)
                      .-..|+.|=.+|+.+|||| ...++|||+||++.+++++.+++.++
T Consensus       123 l~~GD~lAsiiG~~~G~~~-~~~~~~KSleGSla~fi~~~l~~~~~  167 (216)
T COG0170         123 LALGDGLASIIGKRYGRHK-RILGNGKSLEGSLAFFIASFLVLLVL  167 (216)
T ss_pred             HHHhhHHHHHhCcccCccc-cccCCCCchhhhHHHHHHHHHHHHHH
Confidence            3458999999999999993 25889999999999999998887654

>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism]

Probab=95.65  E-value=0.024  Score=59.38  Aligned_cols=46  Identities=33%  Similarity=0.421  Sum_probs=40.2

Q ss_pred             HHHHhhHHHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHH
Q 015272          284 SIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLS  331 (410)
Q Consensus       284 ~vw~sDtgAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~  331 (410)
                      .+=..||.|=.+|+++||+|-++-  |||.||.+.+++..+++..+.-
T Consensus       418 alGiGDTmASiiG~r~G~~RW~~T--kKTlEGT~Afivs~~iv~~ll~  463 (510)
T KOG2468|consen  418 ALGIGDTMASIIGKRYGRIRWSGT--KKTLEGTLAFIVSSFIVCLLLL  463 (510)
T ss_pred             eeccchHHHHHHhhhhcceecCCC--cceeehhhHHHHHHHHHHHHHH
Confidence            445689999999999999999853  9999999999999998877765

>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism]

Probab=92.62  E-value=0.1  Score=54.24  Aligned_cols=103  Identities=27%  Similarity=0.321  Sum_probs=80.4

Q ss_pred             CCchhhhHHHHHHHHHHHhHHHHHHHHHhhccCccccccCCCcccccccCCCcchhhHHHHHHHHHHHHHHhhHHHHHHh
Q 015272          217 GNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGG  296 (410)
Q Consensus       217 ~~~~~~~~~~tl~Gi~Yi~~~~s~li~Lr~~~~~~~~~~~~g~~~~~~~~~~~~~~~gl~~~Ll~~~~vw~sDtgAYfvG  296 (410)
                      +..+...+..+.++++||...++|+...+++ ..|.++...+..|+...++    +++.+++.+++.-|-++|+.+-.-+
T Consensus       214 N~feG~fWFl~P~~lvicnDi~AY~~Gf~fG-ktPLiklSPKKTwEGFiGg----~~~tvv~~i~~s~vL~~~~~~~cp~  288 (432)
T KOG1440|consen  214 NLFEGLFWFLVPAGLVICNDIFAYLFGFFFG-KTPLIKLSPKKTWEGFIGG----TFGTVVFGILFSYVLGHYTFFTCPV  288 (432)
T ss_pred             cccchHHHHHHHhHhheeCchHHHHHhhhhc-CCcccccCCCCccchhhch----hHHHHHHHHHHHHHhccCeEEEecc
Confidence            3334445566778999999999999999986 5677888888888754443    2455667778888999999999999


Q ss_pred             hhcCCccccccCCCCCchhhHHHHHHHH
Q 015272          297 KAFGRTQLTSISPKKTWEGTIVGLGGCI  324 (410)
Q Consensus       297 r~fGKhkL~~ISPkKTwEG~iGGil~av  324 (410)
                      +.+++....+.+|||+||+..=++.+.+
T Consensus       289 ~d~~t~~~~~c~p~~~F~~~~y~lp~~i  316 (432)
T KOG1440|consen  289 KDFSTTPLLSCEPKPLFEPQTYGLPGVI  316 (432)
T ss_pred             cccCCCCccccCcccccCcceecCCcee
Confidence            9999998768999999999877655443

>COG1836 Predicted membrane protein [Function unknown]

Probab=88.17  E-value=28  Score=34.23  Aligned_cols=78  Identities=18%  Similarity=0.222  Sum_probs=53.5

Q ss_pred             HHHHHhhHHHHHHhhhcCCccc-----cccCC----CCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Q 015272          283 SSIIAADTFAFIGGKAFGRTQL-----TSISP----KKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFG  353 (410)
Q Consensus       283 ~~vw~sDtgAYfvGr~fGKhkL-----~~ISP----kKTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~~llg~~~~v~  353 (410)
                      +.+--+||.|==+|+.+||++.     .|+-|    .=|++|-+.|++++.+.+++...+.. . +.. .   -+.+..+
T Consensus       128 vAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS~~GelAav~Ga~iIal~~~l~~~-~-~~~-~---v~~vtla  201 (247)
T COG1836         128 VATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAAVAGAFIIALLSYLVGY-I-SLG-G---VLSVTLA  201 (247)
T ss_pred             HHHHhhhHHHHHHhHhhCCCeEEEEeeeEcCCCCCCccchhhhHHHHHHHHHHHHHHHHHHh-c-ccc-h---hHHHHHH
Confidence            3567899999999999998754     14444    47899999999999988776643322 1 111 1   1234566


Q ss_pred             HhHHHHHHHHhhh
Q 015272          354 SVFGDLTESMIKR  366 (410)
Q Consensus       354 ~~iGDL~ES~iKR  366 (410)
                      |.+|-..+|.+=-
T Consensus       202 Gf~G~~iDSllGA  214 (247)
T COG1836         202 GFAGTNIDSLLGA  214 (247)
T ss_pred             HHHhhhHHHHhhH
Confidence            7778888887643

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=84.42  E-value=42  Score=32.63  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=56.7

Q ss_pred             HHHHHHHhhHHHHHHhhhcCCccc---c--ccCCC----CCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015272          281 SFSSIIAADTFAFIGGKAFGRTQL---T--SISPK----KTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNF  351 (410)
Q Consensus       281 ~~~~vw~sDtgAYfvGr~fGKhkL---~--~ISPk----KTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~~llg~~~~  351 (410)
                      .-+..-.+||.|==.|+..++++.   +  ++.|+    =|++|.+.|++++.+++.........+  ....    .++.
T Consensus       112 ~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~GgVS~lGt~as~~Ga~~Ia~~~~~~~~~~--~~~~----~~~~  185 (226)
T PF01940_consen  112 GSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSGGVSLLGTLASLAGALLIALVAFLLGLIS--FPLV----LLIA  185 (226)
T ss_pred             HHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCCeechHHHHHHHHHHHHHHHHHHHHHccc--hHHH----HHHH
Confidence            345677899999999999987654   2  45554    689999999999999888876554222  2221    2347


Q ss_pred             HHHhHHHHHHHHhh
Q 015272          352 FGSVFGDLTESMIK  365 (410)
Q Consensus       352 v~~~iGDL~ES~iK  365 (410)
                      +.|.+|.+++|.+=
T Consensus       186 ~~G~~Gsl~DSlLG  199 (226)
T PF01940_consen  186 LAGFLGSLLDSLLG  199 (226)
T ss_pred             HHHHHHHHHHHHhh
Confidence            77888888888864

; GO: 0016021 integral to membrane

>TIGR01594 holin_lambda phage holin, lambda family

Probab=83.63  E-value=3.1  Score=35.82  Aligned_cols=73  Identities=19%  Similarity=0.333  Sum_probs=45.4

Q ss_pred             HHHHHhhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHh--HHHHHHHHhhhcC
Q 015272          291 FAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSV--FGDLTESMIKRDA  368 (410)
Q Consensus       291 gAYfvGr~fGKhkL~~ISPkKTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~~llg~~~~v~~~--iGDL~ES~iKR~a  368 (410)
                      .||+-++.-|+. ..    ++..||.+.|.++-.+.. .+. ++++|.  ....+.|..+++.|+  ++++..+.+.|+.
T Consensus        33 mA~LR~~Y~g~~-~~----~~llea~mCg~la~~~~~-~l~-~~g~~~--~~a~~~g~~IGflGvd~ir~~~~~~i~kK~  103 (107)
T TIGR01594        33 IAYLRIRYMGGK-FK----RKLIDALMCAAIALVAAS-ALD-FLGLPT--SLSPFLGGMIGFVGVDKIREFAKRFINKKA  103 (107)
T ss_pred             HHHHHHHHcCcc-HH----HHHHHHHHHHHHHHHHHH-HHH-HcCCcH--HHHHHHhhheeeccHHHHHHHHHHHHHhhc
Confidence            355555554433 11    144688888877743333 222 334443  334456677777664  9999999999999


Q ss_pred             CCCC
Q 015272          369 GVKD  372 (410)
Q Consensus       369 GVKD  372 (410)
                      |++|
T Consensus       104 g~~~  107 (107)
T TIGR01594       104 GVDD  107 (107)
T ss_pred             CCCC
Confidence            9998

This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda.

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=80.50  E-value=15  Score=35.98  Aligned_cols=82  Identities=22%  Similarity=0.329  Sum_probs=54.8

Q ss_pred             HHHHHHhhHHHHHHhhhcCCccc---c--ccCCC----CCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 015272          282 FSSIIAADTFAFIGGKAFGRTQL---T--SISPK----KTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFF  352 (410)
Q Consensus       282 ~~~vw~sDtgAYfvGr~fGKhkL---~--~ISPk----KTwEG~iGGil~avl~~~l~~~~~~~~~~~~~~~llg~~~~v  352 (410)
                      -...-.+||.|==.|+..+|++.   .  ++.|+    =|+||.+.+++++.+++... .... +..+ ..+   +++.+
T Consensus       118 s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~~GT~GgVS~~Gt~As~~Ga~~I~~~~-~~~~-~~~~-~~~---~~~~~  191 (237)
T TIGR00297       118 SVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALLG-YLLG-LISF-KGI---LFSTL  191 (237)
T ss_pred             HHHHHHcchHHHhhhhccCCCCeEeecCccCCCCCCCcccHHHHHHHHHHHHHHHHHH-HHHh-hcch-HHH---HHHHH
Confidence            34567899999999999998553   1  45554    68999999999999887444 2222 1111 112   34556


Q ss_pred             HHhHHHHHHHHhhhcCC
Q 015272          353 GSVFGDLTESMIKRDAG  369 (410)
Q Consensus       353 ~~~iGDL~ES~iKR~aG  369 (410)
                      .|.+|-+++|.+==..+
T Consensus       192 aG~~Gsl~DSlLGAtlQ  208 (237)
T TIGR00297       192 AAFAGTNLDSLLGATLE  208 (237)
T ss_pred             HHHHHHHHHHHHhHHHh
Confidence            78889999997643333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00