Citrus Sinensis ID: 015343
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| 255574761 | 421 | conserved hypothetical protein [Ricinus | 1.0 | 0.969 | 0.748 | 0.0 | |
| 224113283 | 420 | predicted protein [Populus trichocarpa] | 1.0 | 0.971 | 0.747 | 0.0 | |
| 118482411 | 421 | unknown [Populus trichocarpa] | 1.0 | 0.969 | 0.733 | 0.0 | |
| 297835086 | 422 | hypothetical protein ARALYDRAFT_479639 [ | 1.0 | 0.966 | 0.670 | 1e-164 | |
| 18402919 | 422 | O-fucosyltransferase family protein [Ara | 1.0 | 0.966 | 0.668 | 1e-164 | |
| 21593608 | 422 | unknown [Arabidopsis thaliana] | 1.0 | 0.966 | 0.665 | 1e-163 | |
| 449447980 | 413 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.983 | 0.674 | 1e-162 | |
| 225443310 | 417 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.971 | 0.680 | 1e-162 | |
| 449491816 | 413 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.995 | 0.983 | 0.672 | 1e-162 | |
| 30695023 | 423 | O-fucosyltransferase family protein [Ara | 1.0 | 0.964 | 0.647 | 1e-161 |
| >gi|255574761|ref|XP_002528288.1| conserved hypothetical protein [Ricinus communis] gi|223532288|gb|EEF34090.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/421 (74%), Positives = 362/421 (85%), Gaps = 13/421 (3%)
Query: 1 MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDV----AKVAEEGLRTIA 56
MGVDLRQV+AGILTLTMFVMLGNMIKRDHFDS+ EK PG DV KV E GL T A
Sbjct: 1 MGVDLRQVIAGILTLTMFVMLGNMIKRDHFDSVEEKFPGGATDVEFDSGKVTEHGLVTFA 60
Query: 57 KLSKGPWLEDGEQLKPY-------EIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRA 109
K + GPW+ED ++LKP E+E+S+G+VTFSLTNGPEYH+SQIADAVVVAR L A
Sbjct: 61 KSTNGPWIEDAQELKPCWSKSNFDEVEQSKGFVTFSLTNGPEYHISQIADAVVVARYLGA 120
Query: 110 TLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVT 169
T+V+PDIRG+KPGDERKFE++YDV KF++SLDGVVKVVK LP++IS R+ AVVKVPNRVT
Sbjct: 121 TIVLPDIRGNKPGDERKFEEIYDVEKFVQSLDGVVKVVKYLPDDISIRDFAVVKVPNRVT 180
Query: 170 EDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVV 229
EDHI ++I+ IFK KGNIRLATYFPSVNMRK+ +KS++D VACLAMFG+LELQPD+NEVV
Sbjct: 181 EDHISKSIEQIFKRKGNIRLATYFPSVNMRKTAQKSSSDSVACLAMFGSLELQPDINEVV 240
Query: 230 DSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCH--EGNGRKSCYGAHEIAVFLRKIGYD 287
DSM+ERLRTLSRKS GRFI+VDLRV++L+ K CH G G K+CY A EIA+FLRKIG+D
Sbjct: 241 DSMIERLRTLSRKSGGRFISVDLRVEILEKKSCHGSGGGGAKTCYSAQEIALFLRKIGFD 300
Query: 288 KDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQ 347
KDT IYLTQSRWD SL+VLKDIFPKTYTKE+IMP DKK KFL S DSEFEKVIDFY+CSQ
Sbjct: 301 KDTAIYLTQSRWDDSLNVLKDIFPKTYTKESIMPEDKKTKFLQSEDSEFEKVIDFYMCSQ 360
Query: 348 SDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCF 407
SD FVPAISGLFYANVAGKRIA+GK QIL+PADI GSSAS T+ SPY+ KKNH+A+SCF
Sbjct: 361 SDVFVPAISGLFYANVAGKRIAAGKTQILVPADIPGSSASVTNHFSPYISKKNHLAYSCF 420
Query: 408 C 408
C
Sbjct: 421 C 421
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113283|ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|222865485|gb|EEF02616.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|118482411|gb|ABK93128.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297835086|ref|XP_002885425.1| hypothetical protein ARALYDRAFT_479639 [Arabidopsis lyrata subsp. lyrata] gi|297331265|gb|EFH61684.1| hypothetical protein ARALYDRAFT_479639 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18402919|ref|NP_566677.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|9280220|dbj|BAB01710.1| unnamed protein product [Arabidopsis thaliana] gi|28973699|gb|AAO64166.1| unknown protein [Arabidopsis thaliana] gi|29824217|gb|AAP04069.1| unknown protein [Arabidopsis thaliana] gi|110736963|dbj|BAF00437.1| hypothetical protein [Arabidopsis thaliana] gi|332642953|gb|AEE76474.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21593608|gb|AAM65575.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449447980|ref|XP_004141744.1| PREDICTED: uncharacterized protein LOC101215039 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225443310|ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250173 [Vitis vinifera] gi|298204801|emb|CBI25299.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449491816|ref|XP_004159011.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230932 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|30695023|ref|NP_175574.2| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|110738230|dbj|BAF01044.1| hypothetical protein [Arabidopsis thaliana] gi|332194572|gb|AEE32693.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| TAIR|locus:2094731 | 422 | MSR1 "Mannan Synthesis Related | 1.0 | 0.966 | 0.646 | 2.6e-143 | |
| TAIR|locus:2017652 | 423 | MSR2 "Mannan Synthesis Related | 1.0 | 0.964 | 0.626 | 1.6e-141 | |
| TAIR|locus:2130938 | 549 | AT4G16650 [Arabidopsis thalian | 0.482 | 0.358 | 0.253 | 6.6e-17 | |
| TAIR|locus:2121793 | 551 | RHS17 "root hair specific 17" | 0.455 | 0.337 | 0.251 | 9.5e-17 | |
| TAIR|locus:1005716710 | 470 | AT1G38065 "AT1G38065" [Arabido | 0.348 | 0.302 | 0.296 | 1.4e-16 | |
| TAIR|locus:504956200 | 589 | AT1G38131 [Arabidopsis thalian | 0.348 | 0.241 | 0.296 | 3e-16 | |
| TAIR|locus:2079281 | 557 | AT3G26370 [Arabidopsis thalian | 0.431 | 0.315 | 0.219 | 1.5e-14 | |
| TAIR|locus:2174754 | 522 | AT5G64600 [Arabidopsis thalian | 0.433 | 0.339 | 0.275 | 1.7e-14 | |
| TAIR|locus:2014619 | 572 | AT1G76270 [Arabidopsis thalian | 0.247 | 0.176 | 0.320 | 4.1e-14 | |
| TAIR|locus:2168297 | 504 | AT5G65470 [Arabidopsis thalian | 0.404 | 0.327 | 0.263 | 2.3e-12 |
| TAIR|locus:2094731 MSR1 "Mannan Synthesis Related 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 273/422 (64%), Positives = 329/422 (77%)
Query: 1 MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDV----AKVA-EEGLRTI 55
MGVDLRQVVAGILT+TMFVMLG M+ RD+FDS+ EK GD QD+ +KV+ ++GL
Sbjct: 1 MGVDLRQVVAGILTITMFVMLGQMLHRDYFDSLQEKAQGDAQDIEFEGSKVSVKDGLVGT 60
Query: 56 AKLSKGPWLEDGEQLKPY-------EIEESRGYVTFSLTNGPEYHVSQIADXXXXXXXXX 108
+ SKG W+ED L P + S+GYVTFSLTNGPEYH+SQI D
Sbjct: 61 VEGSKGLWMEDNTDLTPCWPTLLSDDAVSSKGYVTFSLTNGPEYHISQITDAVMVAKHLG 120
Query: 109 XXXXXPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRV 168
PDIRGSKPGDER FED+YD +K I+SL+ VVKVVK+LPEE+S RN+A+VKVP RV
Sbjct: 121 ATLVLPDIRGSKPGDERNFEDIYDADKLIKSLENVVKVVKKLPEEVSLRNMAIVKVPTRV 180
Query: 169 TEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEV 228
TED+I E+I PIFK+KGNIR+A+YFPSVN+RKS++ D VACLAMFG+LELQP+VN V
Sbjct: 181 TEDYIKEHIDPIFKSKGNIRVASYFPSVNLRKSSQDGETDPVACLAMFGSLELQPEVNAV 240
Query: 229 VDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGN--GRKSCYGAHEIAVFLRKIGY 286
+SMVERLRT SRKS GRFIAVDLR+D+L+ K CH G K+CY A EIA+FLRK+G+
Sbjct: 241 AESMVERLRTHSRKSGGRFIAVDLRIDILEKKNCHTTGVVGSKTCYNAQEIALFLRKLGF 300
Query: 287 DKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCS 346
DTTIYLTQ RWDSSL++LKDIFPKT+TKE IMPA K+ K+L+S SE+E VIDFY+ S
Sbjct: 301 ASDTTIYLTQPRWDSSLNILKDIFPKTFTKEAIMPASKRSKYLESVSSEYENVIDFYISS 360
Query: 347 QSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSC 406
+SD FVPAISGLFYAN GKRIA GK Q+L+PA+IS +S ATDFISPY+ KKNH+A+SC
Sbjct: 361 RSDVFVPAISGLFYANTVGKRIALGKPQVLVPAEISETSGLATDFISPYISKKNHLAYSC 420
Query: 407 FC 408
FC
Sbjct: 421 FC 422
|
|
| TAIR|locus:2017652 MSR2 "Mannan Synthesis Related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-115 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 5e-31 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 2e-06 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-115
Identities = 106/303 (34%), Positives = 155/303 (51%), Gaps = 21/303 (6%)
Query: 81 YVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDI-RGSKPGDERKFEDVYDVNKFIRS 139
Y+ S G SQI DAV VAR+L ATLV+P++ + S GD KF D+YDV+ FI+S
Sbjct: 1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60
Query: 140 LDGVVKVVKELPEEIS--FRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVN 197
L V+VVK+LPEE++ + V +VP+R + + +E + P+ K G IRLA + +
Sbjct: 61 LKDDVRVVKKLPEELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLA 120
Query: 198 MRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRV--D 255
+ C F L P++ E+ D +V+RLR ++ G F+A+ LR D
Sbjct: 121 NDL--LPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR----EAGGPFLALHLRFEKD 174
Query: 256 LLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSR---WDSSLSVLKDIFPK 312
+L GC K E+ + LR +G+ + T IYL + L L+ IFP
Sbjct: 175 MLAFSGC-----GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPN 229
Query: 313 TYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGK 372
YTKE + A++ F S S +D+ +C +SD FVP G F VAG R G
Sbjct: 230 LYTKETLATAEELAPF--SGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGH 287
Query: 373 NQI 375
+
Sbjct: 288 RKT 290
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 98.19 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 97.71 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 89.25 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-48 Score=380.89 Aligned_cols=271 Identities=24% Similarity=0.370 Sum_probs=187.1
Q ss_pred ecCCchhhHHHHHhHHHHHHHhcceEEeeccCC-CCCCCCCC-----CCCcCChHHHHHhccCccEEeccCchhhhcccc
Q 015343 86 LTNGPEYHVSQIADAVVVARVLRATLVVPDIRG-SKPGDERK-----FEDVYDVNKFIRSLDGVVKVVKELPEEISFRNL 159 (408)
Q Consensus 86 ~~gGlnq~R~~IcdaV~vArlLnATLVlP~l~~-S~w~d~s~-----F~dIfD~dhFI~sL~~dV~Ivk~LP~~~~~~~~ 159 (408)
+.||+||||.++++||++|++||+|||||.+.. +.|++.++ |+++||+++|++.++++|.+.+.+|..+.....
T Consensus 6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~ 85 (351)
T PF10250_consen 6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR 85 (351)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence 789999999999999999999999999999996 78999887 999999999999999999999988876554211
Q ss_pred -------------------------------ceeeCCC-CCChhHHHhhchhhhhhc------ceEEEeecCCccccccC
Q 015343 160 -------------------------------AVVKVPN-RVTEDHIIENIQPIFKAK------GNIRLATYFPSVNMRKS 201 (408)
Q Consensus 160 -------------------------------~~~~~p~-~~s~~yy~~~ilP~l~~~------~vi~l~~f~~~~~~~~~ 201 (408)
....... +..+.+|.++++|.+.++ +++.|.++...+. .+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ 163 (351)
T PF10250_consen 86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLP--DN 163 (351)
T ss_dssp EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS----
T ss_pred hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccch--hc
Confidence 0011111 456677778899999886 9999987644322 34
Q ss_pred CCcchhhhHhhhhhcCceeechhHHHHHHHHHHHHHhcccCCCCceEEEEeeeehhhccCCCCC----------------
Q 015343 202 TEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEG---------------- 265 (408)
Q Consensus 202 ~~p~~~q~lRCr~~f~ALrF~p~I~~lg~~lv~Rlr~~s~~~~gpyiAlHLR~Emla~s~C~~~---------------- 265 (408)
..+.++|+ +|+|+++|+++|++++++++. .+|+|||+|||+|...++.|.++
T Consensus 164 ~~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~ 231 (351)
T PF10250_consen 164 YLDRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKS 231 (351)
T ss_dssp GGGGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGG
T ss_pred ccCccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCchHhhcccCCchHHHHHhHhhcccc
Confidence 45667776 999999999999999999992 35899999999983227888862
Q ss_pred ------CCCccc-cCHHHHHHHHHHhCCCCCceEEEecccc---cccchHHHHhCCCccccccCCChhhHhhhhcccccc
Q 015343 266 ------NGRKSC-YGAHEIAVFLRKIGYDKDTTIYLTQSRW---DSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSE 335 (408)
Q Consensus 266 ------~~~g~C-LtP~Evgl~LralGf~~~T~IYlA~g~~---~~~l~~Lk~~FPnl~tKe~L~~~eeL~~f~~~~~s~ 335 (408)
...+.| ++|++++.+++++|+.+.|.||||++++ .+.|++|++.||++++|+++.+.+|+++|.+ +
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~----~ 307 (351)
T PF10250_consen 232 INPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND----D 307 (351)
T ss_dssp TT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S---------S
T ss_pred ccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc----c
Confidence 113567 9999999999999999999999999995 5689999999999999999999999999984 4
Q ss_pred hhhhhhhhhhhCCCeeeecCCCchhHHHHHHHhhcCCCc
Q 015343 336 FEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQ 374 (408)
Q Consensus 336 ~~AAlDy~Vcl~SDvFv~t~~Gnf~~~V~GhR~~~G~~k 374 (408)
++|+||++||++||+||||..++|+.+|+++|++.|+++
T Consensus 308 ~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~ 346 (351)
T PF10250_consen 308 QLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPK 346 (351)
T ss_dssp --HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS-
T ss_pred chhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCC
Confidence 579999999999999999999999999999999999773
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 59/389 (15%), Positives = 114/389 (29%), Gaps = 144/389 (37%)
Query: 12 ILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKV--------AEEGLRTIAKLSKGPW 63
IL T R +T+ L + +E + K +
Sbjct: 268 ILLTT----------RFK--QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-----Y 310
Query: 64 LEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGD 123
L+ Q P E+ LT P +S IA+++ R AT
Sbjct: 311 LDCRPQDLPREV----------LTTNP-RRLSIIAESI---RDGLATW------------ 344
Query: 124 ERKFEDVYDVNKFIRSLDGVVKVVKELPEEIS--FRNLAV----VKVPNRVTE----DHI 173
+ +K ++ + V++ P E F L+V +P + D I
Sbjct: 345 --DNWKHVNCDKLTTIIESSLNVLE--PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400
Query: 174 IENIQPIFK--------AKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDV 225
++ + K PS+ + + N + +
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN---------------EYAL 445
Query: 226 NEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIG 285
+ S+V+ + + D DL LD Y I L+ I
Sbjct: 446 H---RSIVDHYN-IPKTFDSD----DLIPPYLDQ------------YFYSHIGHHLKNIE 485
Query: 286 YDKD----TTIYL-----------TQSRWD---SSLSVLKDIFPKTYTKENIMPADKKEK 327
+ + ++L + W+ S L+ L+ + K Y +
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL--KFY-----------KP 532
Query: 328 FLDSADSEFEKVIDFYLCSQSDAFVPAIS 356
++ D ++E++++ L F+P I
Sbjct: 533 YICDNDPKYERLVNAIL-----DFLPKIE 556
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.79 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 99.54 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 98.17 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 98.08 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=174.74 Aligned_cols=285 Identities=13% Similarity=0.152 Sum_probs=176.8
Q ss_pred ccCCCcEEEEEec-C-CchhhHHHHHhHHHHHHHhcce----EEeeccCC-CCCCC------CCCCCCcCChHHHHHhcc
Q 015343 75 IEESRGYVTFSLT-N-GPEYHVSQIADAVVVARVLRAT----LVVPDIRG-SKPGD------ERKFEDVYDVNKFIRSLD 141 (408)
Q Consensus 75 ~~~snGyl~v~~~-g-Glnq~R~~IcdaV~vArlLnAT----LVlP~l~~-S~w~d------~s~F~dIfD~dhFI~sL~ 141 (408)
....++||+-..+ | |+|+||...-.|.++|+.||.| ||||-... -.|.. .-.|++.||++++ +
T Consensus 18 ~~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~ 93 (408)
T 4ap5_A 18 AASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----N 93 (408)
T ss_dssp --CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----H
T ss_pred CccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----H
Confidence 3467899998864 5 7999999999999999999999 99996643 33422 2259999999875 3
Q ss_pred CccEEeccCchhhhccc-cce----ee---CCCCC-----------------------------ChhHH-----------
Q 015343 142 GVVKVVKELPEEISFRN-LAV----VK---VPNRV-----------------------------TEDHI----------- 173 (408)
Q Consensus 142 ~dV~Ivk~LP~~~~~~~-~~~----~~---~p~~~-----------------------------s~~yy----------- 173 (408)
..|+|+.. +++.... +.. .. .+..+ .+-|-
T Consensus 94 ~~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c 171 (408)
T 4ap5_A 94 KNIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSC 171 (408)
T ss_dssp TTSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEE
T ss_pred hhCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCcee
Confidence 45566532 2222110 000 00 00000 00000
Q ss_pred ------HhhchhhhhhcceEEEeecCCccccccCCCc--chhhhHhhhhhcCceeechhHHHHHHHHHHHHHhcc-----
Q 015343 174 ------IENIQPIFKAKGNIRLATYFPSVNMRKSTEK--SNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLS----- 240 (408)
Q Consensus 174 ------~~~ilP~l~~~~vi~l~~f~~~~~~~~~~~p--~~~q~lRCr~~f~ALrF~p~I~~lg~~lv~Rlr~~s----- 240 (408)
...+.|.+.+..-++-.+....-.. ....| .+...+| ..|+|+++|.+.|++.++..-...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~-l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~~~~~~~h 245 (408)
T 4ap5_A 172 LSVQGSASIVAPLLLRNTSARSVMLDRAENL-LHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLNSTDDADR 245 (408)
T ss_dssp EEECSBGGGGHHHHHHCTTCSEEEEESGGGS-BCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHCCCTTTTT
T ss_pred EEEeecchhhhhhhhhcCChhhhhhhhcccC-CccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhCcccceee
Confidence 0011122222111110000000000 00011 2222222 479999999999999987654211
Q ss_pred ---------------cCCCCceEEEEeeee--hhhccCCCCCCCCccc-cCHHHHH-HHHHHhCCCCCceEEEecccccc
Q 015343 241 ---------------RKSDGRFIAVDLRVD--LLDNKGCHEGNGRKSC-YGAHEIA-VFLRKIGYDKDTTIYLTQSRWDS 301 (408)
Q Consensus 241 ---------------~~~~gpyiAlHLR~E--mla~s~C~~~~~~g~C-LtP~Evg-l~LralGf~~~T~IYlA~g~~~~ 301 (408)
...+|+|+|+|+|.. +.. ...| .+-++++ .+.+.|.=.+.+.||||+.+.+.
T Consensus 246 ~r~~~dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~---------~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~~~ 316 (408)
T 4ap5_A 246 IPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWG---------HRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRK 316 (408)
T ss_dssp CCCCSSGGGCCCCTTCBCCEEEEEEEECCTTTTTT---------TCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECCCHH
T ss_pred cccchhHhhhhcccccccCCCccccccccccchhh---------hhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCCchh
Confidence 113578999999874 322 2356 5555554 34443433455689999987777
Q ss_pred cchHHHHhCCCccccccCCChhhHhhhhcccccchhhhhhhhhhhCCCeeeecCCCchhHHHHHHHhhcCCCceecCCCC
Q 015343 302 SLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADI 381 (408)
Q Consensus 302 ~l~~Lk~~FPnl~tKe~L~~~eeL~~f~~~~~s~~~AAlDy~Vcl~SDvFv~t~~Gnf~~~V~GhR~~~G~~kti~P~r~ 381 (408)
.+..|++.+|.++.-. ...+++..+.+ +. .|.||.+||.+||+||||..++|+..|.-.|.+.|+....+-|+.
T Consensus 317 ~~~~l~~~~~~~~~~~--~~~~~~~~~~d---~~-~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t~~~~ 390 (408)
T 4ap5_A 317 EYEELKKLLPEMVRFE--PTWEELELYKD---GG-VAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRF 390 (408)
T ss_dssp HHHHHHHHCTTEECCC--CCHHHHHHHHH---HH-HHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGTSCBC
T ss_pred HHHHHHHhCCCcEEec--CcchhhhccCc---ch-hhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCcccccc
Confidence 7789999999876433 34566777753 34 699999999999999999999999999999999999988888887
Q ss_pred CCCCC
Q 015343 382 SGSSA 386 (408)
Q Consensus 382 ~~~~~ 386 (408)
-++..
T Consensus 391 c~~~~ 395 (408)
T 4ap5_A 391 CGDQE 395 (408)
T ss_dssp CCTTC
T ss_pred CCCCc
Confidence 76544
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00