Citrus Sinensis ID: 015343


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------41
MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCFC
ccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccEEEccccccccccccccccccccHHHHHHHcccccEEEccccHHHHccccEEEcccccccHHHHHHHHHHHHHHcccEEEcccccccccccccccccHHHHHHHHHcccEEEcHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHccccccccccccccccHHHHHHHHHHHccccccEEEEEccccccccHHHHHHccccccccccccHHHHHHHcccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHcccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccHcccccccHHHHHcccccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEHcHHHHcccccccccHHHHccHHHHHHHHHHHcEEHHcccHHHcccccccccccccccHHHHHHHHHHHHHHccEEEEccccHHHHcccccccHHHHHHEEHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEEccccccccccccccHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHccccccccccccHHHHHHHcccccHHHHHHHHHHHEccccEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccEEccc
MGVDLRQVVAGILTLTMFVMLGnmikrdhfdsiteklpgdvQDVAKVAEEGLRTIAklskgpwledgeqlkpyeieesrgyvtfsltngpeyhvsQIADAVVVARVLRATLvvpdirgskpgderkfedvyDVNKFIRSLDGVVKVVKELPEEISFRNLavvkvpnrvtedhiIENIQPIFkakgnirlatyfpsvnmrkstekSNADLVACLAMFgtlelqpdvNEVVDSMVERLRTLsrksdgrfIAVDLRVDlldnkgchegngrkscygaHEIAVFLRKigydkdttiYLTQSRWDSSLSVlkdifpktytkenimpadkkekfldSADSEFEKVIDFYLcsqsdafvpaiSGLFYANVAGkriasgknqilipadisgssasatdfispyvlkknhmahscfc
MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTiaklskgpwledgeqLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATlvvpdirgskpgderkfedvydvNKFIRSLDGVVKVVKElpeeisfrnlavvkvpnrvTEDHIIEniqpifkakgniRLATYFPSVNMRKSTEKSNADLVACLAMFGtlelqpdvnEVVDSMVERLrtlsrksdgrfiaVDLRvdlldnkgchegngrkscygaHEIAVFLRKIGYDKDTTIYLtqsrwdsslsvlkdifpktytkenimpadkkEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCFC
MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADavvvarvlratlvvPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCFC
****LRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGS****ERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMR******NADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIM*******FLD*ADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISG**ASATDFISPYVLKKN********
*GVDLRQVVAGILTLTMFVMLGNMIKRDHF*************************AKLSKGPWL**************RGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEIS**N*******NRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRT*****DGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISG**********PYVLKKNHMAHSCFC
MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKN********
*GVDLRQVVAGILTLTMFVMLGNMIKRDHFDSIT*****DVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCFC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCFC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query408 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.786 0.618 0.234 3e-16
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score = 86.7 bits (213), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 158/380 (41%), Gaps = 59/380 (15%)

Query: 40  DVQDVAKVAEEGLRTIAKLSKGPWLEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIAD 99
           +V+++ + A+ G    +   +  W        P   +E+ GY+      G     S I +
Sbjct: 58  NVEELWESAKSGGWRPSSAPRSDW--------PPPTKETNGYLRVRCNGGLNQQRSAICN 109

Query: 100 AVVVARVLRATLVVPDI-RGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRN 158
           AV+ AR++ ATLV+P++   S   D+  F+ +YDV  FI +L   VK+V ++P+    +N
Sbjct: 110 AVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPD--VHKN 167

Query: 159 LAVVKVPN---RVTEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADL--VACL 213
               K+     R   D  IE              A Y    + R + E  N +   + C 
Sbjct: 168 GKTKKIKAFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCR 227

Query: 214 AMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLR--VDLLDNKGCHE------- 264
             +  L  +P + ++ +S+V++LR     S G F+++ LR  +D+L   GC +       
Sbjct: 228 VNYHALRFKPHIMKLSESIVDKLR-----SQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQ 282

Query: 265 -----------------GNGRKS---C-YGAHEIAVFLRKIGYDKDTTIYLTQSRW---D 300
                             N R++   C     E+ + LR + +D  T IYL        +
Sbjct: 283 KILRKYRKENFADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGE 342

Query: 301 SSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGL-- 358
             +   + +FP+    +N    D  E+   ++       +D+ +C  SD F+P   G   
Sbjct: 343 QFMKPFRTLFPRL---DNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSN 399

Query: 359 FYANVAGKRIASGKNQILIP 378
           F  N+ G R+  G    + P
Sbjct: 400 FANNLLGHRLYYGFRTTIRP 419





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
255574761421 conserved hypothetical protein [Ricinus 1.0 0.969 0.748 0.0
224113283420 predicted protein [Populus trichocarpa] 1.0 0.971 0.747 0.0
118482411421 unknown [Populus trichocarpa] 1.0 0.969 0.733 0.0
297835086422 hypothetical protein ARALYDRAFT_479639 [ 1.0 0.966 0.670 1e-164
18402919422 O-fucosyltransferase family protein [Ara 1.0 0.966 0.668 1e-164
21593608422 unknown [Arabidopsis thaliana] 1.0 0.966 0.665 1e-163
449447980413 PREDICTED: uncharacterized protein LOC10 0.995 0.983 0.674 1e-162
225443310417 PREDICTED: uncharacterized protein LOC10 0.992 0.971 0.680 1e-162
449491816413 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.995 0.983 0.672 1e-162
30695023423 O-fucosyltransferase family protein [Ara 1.0 0.964 0.647 1e-161
>gi|255574761|ref|XP_002528288.1| conserved hypothetical protein [Ricinus communis] gi|223532288|gb|EEF34090.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/421 (74%), Positives = 362/421 (85%), Gaps = 13/421 (3%)

Query: 1   MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDV----AKVAEEGLRTIA 56
           MGVDLRQV+AGILTLTMFVMLGNMIKRDHFDS+ EK PG   DV     KV E GL T A
Sbjct: 1   MGVDLRQVIAGILTLTMFVMLGNMIKRDHFDSVEEKFPGGATDVEFDSGKVTEHGLVTFA 60

Query: 57  KLSKGPWLEDGEQLKPY-------EIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRA 109
           K + GPW+ED ++LKP        E+E+S+G+VTFSLTNGPEYH+SQIADAVVVAR L A
Sbjct: 61  KSTNGPWIEDAQELKPCWSKSNFDEVEQSKGFVTFSLTNGPEYHISQIADAVVVARYLGA 120

Query: 110 TLVVPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRVT 169
           T+V+PDIRG+KPGDERKFE++YDV KF++SLDGVVKVVK LP++IS R+ AVVKVPNRVT
Sbjct: 121 TIVLPDIRGNKPGDERKFEEIYDVEKFVQSLDGVVKVVKYLPDDISIRDFAVVKVPNRVT 180

Query: 170 EDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEVV 229
           EDHI ++I+ IFK KGNIRLATYFPSVNMRK+ +KS++D VACLAMFG+LELQPD+NEVV
Sbjct: 181 EDHISKSIEQIFKRKGNIRLATYFPSVNMRKTAQKSSSDSVACLAMFGSLELQPDINEVV 240

Query: 230 DSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCH--EGNGRKSCYGAHEIAVFLRKIGYD 287
           DSM+ERLRTLSRKS GRFI+VDLRV++L+ K CH   G G K+CY A EIA+FLRKIG+D
Sbjct: 241 DSMIERLRTLSRKSGGRFISVDLRVEILEKKSCHGSGGGGAKTCYSAQEIALFLRKIGFD 300

Query: 288 KDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQ 347
           KDT IYLTQSRWD SL+VLKDIFPKTYTKE+IMP DKK KFL S DSEFEKVIDFY+CSQ
Sbjct: 301 KDTAIYLTQSRWDDSLNVLKDIFPKTYTKESIMPEDKKTKFLQSEDSEFEKVIDFYMCSQ 360

Query: 348 SDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSCF 407
           SD FVPAISGLFYANVAGKRIA+GK QIL+PADI GSSAS T+  SPY+ KKNH+A+SCF
Sbjct: 361 SDVFVPAISGLFYANVAGKRIAAGKTQILVPADIPGSSASVTNHFSPYISKKNHLAYSCF 420

Query: 408 C 408
           C
Sbjct: 421 C 421




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113283|ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|222865485|gb|EEF02616.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118482411|gb|ABK93128.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297835086|ref|XP_002885425.1| hypothetical protein ARALYDRAFT_479639 [Arabidopsis lyrata subsp. lyrata] gi|297331265|gb|EFH61684.1| hypothetical protein ARALYDRAFT_479639 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18402919|ref|NP_566677.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|9280220|dbj|BAB01710.1| unnamed protein product [Arabidopsis thaliana] gi|28973699|gb|AAO64166.1| unknown protein [Arabidopsis thaliana] gi|29824217|gb|AAP04069.1| unknown protein [Arabidopsis thaliana] gi|110736963|dbj|BAF00437.1| hypothetical protein [Arabidopsis thaliana] gi|332642953|gb|AEE76474.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21593608|gb|AAM65575.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449447980|ref|XP_004141744.1| PREDICTED: uncharacterized protein LOC101215039 [Cucumis sativus] Back     alignment and taxonomy information
>gi|225443310|ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250173 [Vitis vinifera] gi|298204801|emb|CBI25299.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449491816|ref|XP_004159011.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230932 [Cucumis sativus] Back     alignment and taxonomy information
>gi|30695023|ref|NP_175574.2| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|110738230|dbj|BAF01044.1| hypothetical protein [Arabidopsis thaliana] gi|332194572|gb|AEE32693.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
TAIR|locus:2094731422 MSR1 "Mannan Synthesis Related 1.0 0.966 0.646 2.6e-143
TAIR|locus:2017652423 MSR2 "Mannan Synthesis Related 1.0 0.964 0.626 1.6e-141
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.482 0.358 0.253 6.6e-17
TAIR|locus:2121793551 RHS17 "root hair specific 17" 0.455 0.337 0.251 9.5e-17
TAIR|locus:1005716710470 AT1G38065 "AT1G38065" [Arabido 0.348 0.302 0.296 1.4e-16
TAIR|locus:504956200589 AT1G38131 [Arabidopsis thalian 0.348 0.241 0.296 3e-16
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.431 0.315 0.219 1.5e-14
TAIR|locus:2174754522 AT5G64600 [Arabidopsis thalian 0.433 0.339 0.275 1.7e-14
TAIR|locus:2014619 572 AT1G76270 [Arabidopsis thalian 0.247 0.176 0.320 4.1e-14
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.404 0.327 0.263 2.3e-12
TAIR|locus:2094731 MSR1 "Mannan Synthesis Related 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
 Identities = 273/422 (64%), Positives = 329/422 (77%)

Query:     1 MGVDLRQVVAGILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDV----AKVA-EEGLRTI 55
             MGVDLRQVVAGILT+TMFVMLG M+ RD+FDS+ EK  GD QD+    +KV+ ++GL   
Sbjct:     1 MGVDLRQVVAGILTITMFVMLGQMLHRDYFDSLQEKAQGDAQDIEFEGSKVSVKDGLVGT 60

Query:    56 AKLSKGPWLEDGEQLKPY-------EIEESRGYVTFSLTNGPEYHVSQIADXXXXXXXXX 108
              + SKG W+ED   L P        +   S+GYVTFSLTNGPEYH+SQI D         
Sbjct:    61 VEGSKGLWMEDNTDLTPCWPTLLSDDAVSSKGYVTFSLTNGPEYHISQITDAVMVAKHLG 120

Query:   109 XXXXXPDIRGSKPGDERKFEDVYDVNKFIRSLDGVVKVVKELPEEISFRNLAVVKVPNRV 168
                  PDIRGSKPGDER FED+YD +K I+SL+ VVKVVK+LPEE+S RN+A+VKVP RV
Sbjct:   121 ATLVLPDIRGSKPGDERNFEDIYDADKLIKSLENVVKVVKKLPEEVSLRNMAIVKVPTRV 180

Query:   169 TEDHIIENIQPIFKAKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDVNEV 228
             TED+I E+I PIFK+KGNIR+A+YFPSVN+RKS++    D VACLAMFG+LELQP+VN V
Sbjct:   181 TEDYIKEHIDPIFKSKGNIRVASYFPSVNLRKSSQDGETDPVACLAMFGSLELQPEVNAV 240

Query:   229 VDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGN--GRKSCYGAHEIAVFLRKIGY 286
              +SMVERLRT SRKS GRFIAVDLR+D+L+ K CH     G K+CY A EIA+FLRK+G+
Sbjct:   241 AESMVERLRTHSRKSGGRFIAVDLRIDILEKKNCHTTGVVGSKTCYNAQEIALFLRKLGF 300

Query:   287 DKDTTIYLTQSRWDSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCS 346
               DTTIYLTQ RWDSSL++LKDIFPKT+TKE IMPA K+ K+L+S  SE+E VIDFY+ S
Sbjct:   301 ASDTTIYLTQPRWDSSLNILKDIFPKTFTKEAIMPASKRSKYLESVSSEYENVIDFYISS 360

Query:   347 QSDAFVPAISGLFYANVAGKRIASGKNQILIPADISGSSASATDFISPYVLKKNHMAHSC 406
             +SD FVPAISGLFYAN  GKRIA GK Q+L+PA+IS +S  ATDFISPY+ KKNH+A+SC
Sbjct:   361 RSDVFVPAISGLFYANTVGKRIALGKPQVLVPAEISETSGLATDFISPYISKKNHLAYSC 420

Query:   407 FC 408
             FC
Sbjct:   421 FC 422




GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2017652 MSR2 "Mannan Synthesis Related 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-115
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 5e-31
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 2e-06
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  337 bits (867), Expect = e-115
 Identities = 106/303 (34%), Positives = 155/303 (51%), Gaps = 21/303 (6%)

Query: 81  YVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDI-RGSKPGDERKFEDVYDVNKFIRS 139
           Y+  S   G     SQI DAV VAR+L ATLV+P++ + S  GD  KF D+YDV+ FI+S
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 140 LDGVVKVVKELPEEIS--FRNLAVVKVPNRVTEDHIIENIQPIFKAKGNIRLATYFPSVN 197
           L   V+VVK+LPEE++     + V +VP+R +  + +E + P+ K  G IRLA +   + 
Sbjct: 61  LKDDVRVVKKLPEELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLA 120

Query: 198 MRKSTEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRV--D 255
                       + C   F  L   P++ E+ D +V+RLR    ++ G F+A+ LR   D
Sbjct: 121 NDL--LPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR----EAGGPFLALHLRFEKD 174

Query: 256 LLDNKGCHEGNGRKSCYGAHEIAVFLRKIGYDKDTTIYLTQSR---WDSSLSVLKDIFPK 312
           +L   GC      K      E+ + LR +G+ + T IYL        +  L  L+ IFP 
Sbjct: 175 MLAFSGC-----GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPN 229

Query: 313 TYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGK 372
            YTKE +  A++   F  S  S     +D+ +C +SD FVP   G F   VAG R   G 
Sbjct: 230 LYTKETLATAEELAPF--SGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGH 287

Query: 373 NQI 375
            + 
Sbjct: 288 RKT 290


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 408
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 98.19
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 97.71
PF01531298 Glyco_transf_11: Glycosyl transferase family 11; I 89.25
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=8.5e-48  Score=380.89  Aligned_cols=271  Identities=24%  Similarity=0.370  Sum_probs=187.1

Q ss_pred             ecCCchhhHHHHHhHHHHHHHhcceEEeeccCC-CCCCCCCC-----CCCcCChHHHHHhccCccEEeccCchhhhcccc
Q 015343           86 LTNGPEYHVSQIADAVVVARVLRATLVVPDIRG-SKPGDERK-----FEDVYDVNKFIRSLDGVVKVVKELPEEISFRNL  159 (408)
Q Consensus        86 ~~gGlnq~R~~IcdaV~vArlLnATLVlP~l~~-S~w~d~s~-----F~dIfD~dhFI~sL~~dV~Ivk~LP~~~~~~~~  159 (408)
                      +.||+||||.++++||++|++||+|||||.+.. +.|++.++     |+++||+++|++.++++|.+.+.+|..+.....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            789999999999999999999999999999996 78999887     999999999999999999999988876554211


Q ss_pred             -------------------------------ceeeCCC-CCChhHHHhhchhhhhhc------ceEEEeecCCccccccC
Q 015343          160 -------------------------------AVVKVPN-RVTEDHIIENIQPIFKAK------GNIRLATYFPSVNMRKS  201 (408)
Q Consensus       160 -------------------------------~~~~~p~-~~s~~yy~~~ilP~l~~~------~vi~l~~f~~~~~~~~~  201 (408)
                                                     ....... +..+.+|.++++|.+.++      +++.|.++...+.  .+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~  163 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLP--DN  163 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS----
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccch--hc
Confidence                                           0011111 456677778899999886      9999987644322  34


Q ss_pred             CCcchhhhHhhhhhcCceeechhHHHHHHHHHHHHHhcccCCCCceEEEEeeeehhhccCCCCC----------------
Q 015343          202 TEKSNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEG----------------  265 (408)
Q Consensus       202 ~~p~~~q~lRCr~~f~ALrF~p~I~~lg~~lv~Rlr~~s~~~~gpyiAlHLR~Emla~s~C~~~----------------  265 (408)
                      ..+.++|+        +|+|+++|+++|++++++++.    .+|+|||+|||+|...++.|.++                
T Consensus       164 ~~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~  231 (351)
T PF10250_consen  164 YLDRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKS  231 (351)
T ss_dssp             GGGGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGG
T ss_pred             ccCccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCchHhhcccCCchHHHHHhHhhcccc
Confidence            45667776        999999999999999999992    35899999999983227888862                


Q ss_pred             ------CCCccc-cCHHHHHHHHHHhCCCCCceEEEecccc---cccchHHHHhCCCccccccCCChhhHhhhhcccccc
Q 015343          266 ------NGRKSC-YGAHEIAVFLRKIGYDKDTTIYLTQSRW---DSSLSVLKDIFPKTYTKENIMPADKKEKFLDSADSE  335 (408)
Q Consensus       266 ------~~~g~C-LtP~Evgl~LralGf~~~T~IYlA~g~~---~~~l~~Lk~~FPnl~tKe~L~~~eeL~~f~~~~~s~  335 (408)
                            ...+.| ++|++++.+++++|+.+.|.||||++++   .+.|++|++.||++++|+++.+.+|+++|.+    +
T Consensus       232 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~----~  307 (351)
T PF10250_consen  232 INPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND----D  307 (351)
T ss_dssp             TT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S---------S
T ss_pred             ccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc----c
Confidence                  113567 9999999999999999999999999995   5689999999999999999999999999984    4


Q ss_pred             hhhhhhhhhhhCCCeeeecCCCchhHHHHHHHhhcCCCc
Q 015343          336 FEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQ  374 (408)
Q Consensus       336 ~~AAlDy~Vcl~SDvFv~t~~Gnf~~~V~GhR~~~G~~k  374 (408)
                      ++|+||++||++||+||||..++|+.+|+++|++.|+++
T Consensus       308 ~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~  346 (351)
T PF10250_consen  308 QLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPK  346 (351)
T ss_dssp             --HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS-
T ss_pred             chhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCC
Confidence            579999999999999999999999999999999999773



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 59/389 (15%), Positives = 114/389 (29%), Gaps = 144/389 (37%)

Query: 12  ILTLTMFVMLGNMIKRDHFDSITEKLPGDVQDVAKV--------AEEGLRTIAKLSKGPW 63
           IL  T          R     +T+ L         +         +E    + K     +
Sbjct: 268 ILLTT----------RFK--QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-----Y 310

Query: 64  LEDGEQLKPYEIEESRGYVTFSLTNGPEYHVSQIADAVVVARVLRATLVVPDIRGSKPGD 123
           L+   Q  P E+          LT  P   +S IA+++   R   AT             
Sbjct: 311 LDCRPQDLPREV----------LTTNP-RRLSIIAESI---RDGLATW------------ 344

Query: 124 ERKFEDVYDVNKFIRSLDGVVKVVKELPEEIS--FRNLAV----VKVPNRVTE----DHI 173
                   + +K    ++  + V++  P E    F  L+V      +P  +      D I
Sbjct: 345 --DNWKHVNCDKLTTIIESSLNVLE--PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 174 IENIQPIFK--------AKGNIRLATYFPSVNMRKSTEKSNADLVACLAMFGTLELQPDV 225
             ++  +           K         PS+ +    +  N               +  +
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN---------------EYAL 445

Query: 226 NEVVDSMVERLRTLSRKSDGRFIAVDLRVDLLDNKGCHEGNGRKSCYGAHEIAVFLRKIG 285
           +    S+V+    + +  D      DL    LD             Y    I   L+ I 
Sbjct: 446 H---RSIVDHYN-IPKTFDSD----DLIPPYLDQ------------YFYSHIGHHLKNIE 485

Query: 286 YDKD----TTIYL-----------TQSRWD---SSLSVLKDIFPKTYTKENIMPADKKEK 327
           + +       ++L             + W+   S L+ L+ +  K Y           + 
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL--KFY-----------KP 532

Query: 328 FLDSADSEFEKVIDFYLCSQSDAFVPAIS 356
           ++   D ++E++++  L      F+P I 
Sbjct: 533 YICDNDPKYERLVNAIL-----DFLPKIE 556


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query408
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.79
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 99.54
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 98.17
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 98.08
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.79  E-value=2.1e-18  Score=174.74  Aligned_cols=285  Identities=13%  Similarity=0.152  Sum_probs=176.8

Q ss_pred             ccCCCcEEEEEec-C-CchhhHHHHHhHHHHHHHhcce----EEeeccCC-CCCCC------CCCCCCcCChHHHHHhcc
Q 015343           75 IEESRGYVTFSLT-N-GPEYHVSQIADAVVVARVLRAT----LVVPDIRG-SKPGD------ERKFEDVYDVNKFIRSLD  141 (408)
Q Consensus        75 ~~~snGyl~v~~~-g-Glnq~R~~IcdaV~vArlLnAT----LVlP~l~~-S~w~d------~s~F~dIfD~dhFI~sL~  141 (408)
                      ....++||+-..+ | |+|+||...-.|.++|+.||.|    ||||-... -.|..      .-.|++.||++++    +
T Consensus        18 ~~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~   93 (408)
T 4ap5_A           18 AASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----N   93 (408)
T ss_dssp             --CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----H
T ss_pred             CccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----H
Confidence            3467899998864 5 7999999999999999999999    99996643 33422      2259999999875    3


Q ss_pred             CccEEeccCchhhhccc-cce----ee---CCCCC-----------------------------ChhHH-----------
Q 015343          142 GVVKVVKELPEEISFRN-LAV----VK---VPNRV-----------------------------TEDHI-----------  173 (408)
Q Consensus       142 ~dV~Ivk~LP~~~~~~~-~~~----~~---~p~~~-----------------------------s~~yy-----------  173 (408)
                      ..|+|+..  +++.... +..    ..   .+..+                             .+-|-           
T Consensus        94 ~~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c  171 (408)
T 4ap5_A           94 KNIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSC  171 (408)
T ss_dssp             TTSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEE
T ss_pred             hhCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCcee
Confidence            45566532  2222110 000    00   00000                             00000           


Q ss_pred             ------HhhchhhhhhcceEEEeecCCccccccCCCc--chhhhHhhhhhcCceeechhHHHHHHHHHHHHHhcc-----
Q 015343          174 ------IENIQPIFKAKGNIRLATYFPSVNMRKSTEK--SNADLVACLAMFGTLELQPDVNEVVDSMVERLRTLS-----  240 (408)
Q Consensus       174 ------~~~ilP~l~~~~vi~l~~f~~~~~~~~~~~p--~~~q~lRCr~~f~ALrF~p~I~~lg~~lv~Rlr~~s-----  240 (408)
                            ...+.|.+.+..-++-.+....-.. ....|  .+...+|     ..|+|+++|.+.|++.++..-...     
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~-l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~~~~~~~h  245 (408)
T 4ap5_A          172 LSVQGSASIVAPLLLRNTSARSVMLDRAENL-LHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLNSTDDADR  245 (408)
T ss_dssp             EEECSBGGGGHHHHHHCTTCSEEEEESGGGS-BCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHCCCTTTTT
T ss_pred             EEEeecchhhhhhhhhcCChhhhhhhhcccC-CccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhCcccceee
Confidence                  0011122222111110000000000 00011  2222222     479999999999999987654211     


Q ss_pred             ---------------cCCCCceEEEEeeee--hhhccCCCCCCCCccc-cCHHHHH-HHHHHhCCCCCceEEEecccccc
Q 015343          241 ---------------RKSDGRFIAVDLRVD--LLDNKGCHEGNGRKSC-YGAHEIA-VFLRKIGYDKDTTIYLTQSRWDS  301 (408)
Q Consensus       241 ---------------~~~~gpyiAlHLR~E--mla~s~C~~~~~~g~C-LtP~Evg-l~LralGf~~~T~IYlA~g~~~~  301 (408)
                                     ...+|+|+|+|+|..  +..         ...| .+-++++ .+.+.|.=.+.+.||||+.+.+.
T Consensus       246 ~r~~~dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~---------~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~~~  316 (408)
T 4ap5_A          246 IPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWG---------HRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRK  316 (408)
T ss_dssp             CCCCSSGGGCCCCTTCBCCEEEEEEEECCTTTTTT---------TCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECCCHH
T ss_pred             cccchhHhhhhcccccccCCCccccccccccchhh---------hhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCCchh
Confidence                           113578999999874  322         2356 5555554 34443433455689999987777


Q ss_pred             cchHHHHhCCCccccccCCChhhHhhhhcccccchhhhhhhhhhhCCCeeeecCCCchhHHHHHHHhhcCCCceecCCCC
Q 015343          302 SLSVLKDIFPKTYTKENIMPADKKEKFLDSADSEFEKVIDFYLCSQSDAFVPAISGLFYANVAGKRIASGKNQILIPADI  381 (408)
Q Consensus       302 ~l~~Lk~~FPnl~tKe~L~~~eeL~~f~~~~~s~~~AAlDy~Vcl~SDvFv~t~~Gnf~~~V~GhR~~~G~~kti~P~r~  381 (408)
                      .+..|++.+|.++.-.  ...+++..+.+   +. .|.||.+||.+||+||||..++|+..|.-.|.+.|+....+-|+.
T Consensus       317 ~~~~l~~~~~~~~~~~--~~~~~~~~~~d---~~-~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t~~~~  390 (408)
T 4ap5_A          317 EYEELKKLLPEMVRFE--PTWEELELYKD---GG-VAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRF  390 (408)
T ss_dssp             HHHHHHHHCTTEECCC--CCHHHHHHHHH---HH-HHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGTSCBC
T ss_pred             HHHHHHHhCCCcEEec--CcchhhhccCc---ch-hhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCcccccc
Confidence            7789999999876433  34566777753   34 699999999999999999999999999999999999988888887


Q ss_pred             CCCCC
Q 015343          382 SGSSA  386 (408)
Q Consensus       382 ~~~~~  386 (408)
                      -++..
T Consensus       391 c~~~~  395 (408)
T 4ap5_A          391 CGDQE  395 (408)
T ss_dssp             CCTTC
T ss_pred             CCCCc
Confidence            76544



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00