Citrus Sinensis ID: 016053
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 396 | 2.2.26 [Sep-21-2011] | |||||||
| Q9R9N2 | 351 | Lipopolysaccharide core b | yes | no | 0.361 | 0.407 | 0.268 | 3e-07 |
| >sp|Q9R9N2|LPSB_RHIME Lipopolysaccharide core biosynthesis mannosyltransferase LpsB OS=Rhizobium meliloti (strain 1021) GN=lpsB PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286
+ +P+T ++H ++K + AK+ +LG+ V KG D
Sbjct: 132 LDVPNTVILHGIDTKRFQPPFDKTEAKK--------ALGLDPAKKFVGCFGRVRHQKGTD 183
Query: 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346
LF+ S L P A++ G FESEL+ V + + DR+ FV +
Sbjct: 184 LFVDSMIALLPC-------RPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGE 236
Query: 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
+ + A+D+ V Q W E FG +EAMA +PV+
Sbjct: 237 HTNIPDWYRALDLFVA-PQRW-EGFGLTPLEAMATGVPVV 274
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Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2EC: .EC: 4EC: .EC: -EC: .EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 396 | ||||||
| 224133786 | 481 | predicted protein [Populus trichocarpa] | 0.969 | 0.798 | 0.805 | 1e-169 | |
| 302142552 | 463 | unnamed protein product [Vitis vinifera] | 0.954 | 0.816 | 0.772 | 1e-162 | |
| 147771878 | 495 | hypothetical protein VITISV_033235 [Viti | 0.964 | 0.771 | 0.751 | 1e-160 | |
| 225458171 | 479 | PREDICTED: uncharacterized protein LOC10 | 0.964 | 0.797 | 0.748 | 1e-160 | |
| 255538754 | 477 | glycosyltransferase, putative [Ricinus c | 0.957 | 0.794 | 0.744 | 1e-152 | |
| 356518559 | 464 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.821 | 0.744 | 1e-152 | |
| 449436130 | 472 | PREDICTED: uncharacterized protein LOC10 | 0.939 | 0.788 | 0.755 | 1e-151 | |
| 15222229 | 463 | UDP-glycosyltransferase-like protein [Ar | 0.931 | 0.796 | 0.752 | 1e-151 | |
| 297839425 | 458 | glycosyl transferase family 1 protein [A | 0.919 | 0.794 | 0.752 | 1e-151 | |
| 225431277 | 466 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.817 | 0.733 | 1e-148 |
| >gi|224133786|ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|222836765|gb|EEE75158.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/390 (80%), Positives = 345/390 (88%), Gaps = 6/390 (1%)
Query: 3 KHSATGWWVP--LTKRWILALLIMLSISTAIAFFIRAALDPCD----RHLEVSDKKRVQS 56
+HS T W P + KRW+L LLIMLS+ST IAFFI++A D CD + +V+ +
Sbjct: 7 QHSNTAGWAPPSVQKRWLLTLLIMLSVSTLIAFFIKSAFDSCDPPHPHNFDVAASNKPAK 66
Query: 57 QSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116
I T SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLR VGT+V WITIQKPS
Sbjct: 67 VFSNSIKTAPSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRSVGTEVFWITIQKPS 126
Query: 117 EEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRV 176
E DEV+YSLE KM RGVQV+SAKGQE I+TA KADL+VLNTAVAGKWLDAVLKE+VPRV
Sbjct: 127 ETDEVVYSLEQKMLVRGVQVLSAKGQEAIDTAFKADLVVLNTAVAGKWLDAVLKENVPRV 186
Query: 177 LPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH 236
LP VLWWIHEMRGHYFKLDYVKHLPLV GAMIDSHVTAEYWKNRT+ERLRIKMP+TYVVH
Sbjct: 187 LPKVLWWIHEMRGHYFKLDYVKHLPLVGGAMIDSHVTAEYWKNRTQERLRIKMPETYVVH 246
Query: 237 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 296
LGNSKELMEVAED+VAKRVLREH+RESLGVR+ED+LFAIINSVSRGKGQDLFL SFYESL
Sbjct: 247 LGNSKELMEVAEDSVAKRVLREHIRESLGVRDEDILFAIINSVSRGKGQDLFLRSFYESL 306
Query: 297 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA 356
++I+ KKL+VPS+HAVI+GSDM+AQTKFE+ELRNYVMQK IQDRVHF+NKTLTVAPYLAA
Sbjct: 307 QIIQVKKLKVPSMHAVIVGSDMSAQTKFETELRNYVMQKNIQDRVHFINKTLTVAPYLAA 366
Query: 357 IDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
IDVLVQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 367 IDVLVQNSQARGECFGRITIEAMAFQLPVL 396
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142552|emb|CBI19755.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 298/386 (77%), Positives = 338/386 (87%), Gaps = 8/386 (2%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVP 60
M K S + W+ KRW L L+ +LS ST I IRAA D C+ + R+Q S
Sbjct: 1 MAKQSTS--WLTFHKRWPLLLVALLSTSTVIVLLIRAASDSCN----TNSNTRIQVTS-- 52
Query: 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE 120
++ T S+PL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG +V W+TIQKP++ DE
Sbjct: 53 QVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWLTIQKPTDSDE 112
Query: 121 VIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180
VIYSLEH+M DRGV+V AKGQE I+TALKADL+VLNTAVAGKWLD+V+KE+VPR+LP V
Sbjct: 113 VIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSVVKENVPRILPKV 172
Query: 181 LWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS 240
LWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNS
Sbjct: 173 LWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNS 232
Query: 241 KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIK 300
KELME+AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVSRGKGQDLFL SFY+SL+LIK
Sbjct: 233 KELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIK 292
Query: 301 EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL 360
+KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTLTVAPYLA+IDVL
Sbjct: 293 GRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVL 352
Query: 361 VQNSQAWGECFGRITIEAMAFQLPVL 386
VQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 353 VQNSQARGECFGRITIEAMAFQLPVL 378
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147771878|emb|CAN73426.1| hypothetical protein VITISV_033235 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/398 (75%), Positives = 340/398 (85%), Gaps = 16/398 (4%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVS----------- 49
M K S + W+ KRW L L+ +LS ST I IRAA D C+ + +
Sbjct: 1 MAKQSTS--WLTFHKRWPLLLVALLSTSTVIVLLIRAASDSCNTNSVTTTTTITTTPHYS 58
Query: 50 -DKKRVQSQSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108
+ R+Q S ++ T S+PL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG +V
Sbjct: 59 YENTRIQVTS--QVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVV 116
Query: 109 WITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAV 168
W+TIQKP++ DEVIYSLEH+M DRGV+V AKGQE I+TALKADL+VLNTAVAGKWLD+V
Sbjct: 117 WLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSV 176
Query: 169 LKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK 228
+KE+VPR+LP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IK
Sbjct: 177 VKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIK 236
Query: 229 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 288
MP+TYVVHLGNSKELME+AE+NVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF
Sbjct: 237 MPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 296
Query: 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348
L SFY+SL+LIK +KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTL
Sbjct: 297 LRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTL 356
Query: 349 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
TVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 357 TVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 394
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458171|ref|XP_002281084.1| PREDICTED: uncharacterized protein LOC100257473 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 298/398 (74%), Positives = 340/398 (85%), Gaps = 16/398 (4%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVS----------- 49
M K S + W+ KRW L L+ +LS ST I IRAA D C+ + +
Sbjct: 1 MAKQSTS--WLTFHKRWPLLLVALLSTSTVIVLLIRAASDSCNTNSVTTTTTITTTPHYS 58
Query: 50 -DKKRVQSQSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108
+ R+Q S ++ T S+PL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG +V
Sbjct: 59 YENTRIQVTS--QVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVV 116
Query: 109 WITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAV 168
W+TIQKP++ DEVIYSLEH+M DRGV+V AKGQE I+TALKADL+VLNTAVAGKWLD+V
Sbjct: 117 WLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSV 176
Query: 169 LKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK 228
+KE+VPR+LP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IK
Sbjct: 177 VKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIK 236
Query: 229 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 288
MP+TYVVHLGNSKELME+AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVSRGKGQDLF
Sbjct: 237 MPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLF 296
Query: 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348
L SFY+SL+LIK +KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTL
Sbjct: 297 LRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTL 356
Query: 349 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
TVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 357 TVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 394
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538754|ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis] gi|223551143|gb|EEF52629.1| glycosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 300/403 (74%), Positives = 329/403 (81%), Gaps = 24/403 (5%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDP---------------CDRH 45
M K S + W RW L +L ++ST I F IR+A D DR
Sbjct: 1 MAKQS-SAWITKHKNRWPLMILAFFTLSTLIVFSIRSASDSCHSSSNITTTATTANVDRF 59
Query: 46 LE--VSDKKRVQSQSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV 103
E V K ++ S P +PL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV
Sbjct: 60 GEPKVDSKPQIHSSVAP------NPLDFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV 113
Query: 104 GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGK 163
G +V WIT QKP+E DEVIYSLE+KM DRGVQV SAKGQ+ I+TALKADL+VLNTAVAGK
Sbjct: 114 GAEVVWITNQKPTETDEVIYSLENKMLDRGVQVFSAKGQKAIDTALKADLVVLNTAVAGK 173
Query: 164 WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRE 223
WLDA LKE V +VLP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRE
Sbjct: 174 WLDATLKESVQQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSHTTAEYWKNRTRE 233
Query: 224 RLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK 283
RL IKMP+TYVVHLGNSK+LMEVAED+VAKRVL EHVRESLGVRN+DLLFAIINSVSRGK
Sbjct: 234 RLGIKMPETYVVHLGNSKDLMEVAEDSVAKRVLCEHVRESLGVRNDDLLFAIINSVSRGK 293
Query: 284 GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 343
GQDLFL SFYESL+LI+EKKL+VPS+HAV++GSDMNAQTKFE ELR +V +KKIQDRVHF
Sbjct: 294 GQDLFLRSFYESLQLIQEKKLKVPSLHAVVVGSDMNAQTKFEMELRKFVQEKKIQDRVHF 353
Query: 344 VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
VNKTLTVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 354 VNKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 396
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518559|ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791337 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 289/388 (74%), Positives = 326/388 (84%), Gaps = 7/388 (1%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAA-LDPCD-RHLEVSDKKRVQSQS 58
M KHS KRW + L LS+ST +R+ D C+ H V+ +++S
Sbjct: 1 MAKHSVA----MAKKRWPIMLAAFLSVSTVTVLLMRSNNSDSCNTNHFTVAQDNQIRS-P 55
Query: 59 VPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE 118
V SSPL FMKSKLVL+VSHELSLSGGPLLLMELAFLLRGVG+ V WI+ QKPSE
Sbjct: 56 VQLTNAASSPLIFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWISNQKPSEH 115
Query: 119 DEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLP 178
D V+YSLE KM DRGVQV+SAKG+ I+TALKAD+++LNTAVAGKWLDA+LKE V VLP
Sbjct: 116 DRVVYSLESKMLDRGVQVLSAKGENAIDTALKADMVILNTAVAGKWLDAILKEKVAHVLP 175
Query: 179 NVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG 238
VLWWIHEMRGHYFK++YVKHLP VAGAMIDSH TAEYWKNRTRERL I+MP+TYVVHLG
Sbjct: 176 KVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIEMPETYVVHLG 235
Query: 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLEL 298
NSKELMEVAED+VAKRVLREHVRESLGVRN+DLLFAIINSVSRGKGQDLFL SFYESL+L
Sbjct: 236 NSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQL 295
Query: 299 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 358
I+EKKL++P +HAVI+GSDMNAQTKFE ELR +V++KKIQ+RVHFVNKTL VAPYLAAID
Sbjct: 296 IQEKKLQLPFLHAVIVGSDMNAQTKFEMELRKFVVEKKIQNRVHFVNKTLAVAPYLAAID 355
Query: 359 VLVQNSQAWGECFGRITIEAMAFQLPVL 386
VLVQNSQA GECFGRITIEAMAF+LPVL
Sbjct: 356 VLVQNSQARGECFGRITIEAMAFRLPVL 383
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436130|ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206589 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/376 (75%), Positives = 324/376 (86%), Gaps = 4/376 (1%)
Query: 15 KRWILALLIMLSISTAIAFFIRAALDPC---DRHLEVSDKKRVQSQSVPRIATKS-SPLS 70
KRW L +L ++SISTA+ FF+R D C D V +K P+ K+ +PL
Sbjct: 14 KRWPLMILALVSISTAMVFFMRTTFDSCTGNDNRRFVEEKGIGSKILSPQNERKAPNPLD 73
Query: 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW 130
FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT+V WIT QKP E DEV+YSLE KM
Sbjct: 74 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTQVVWITNQKPPEPDEVVYSLERKML 133
Query: 131 DRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH 190
DRGVQV+SAK QE + TALKA L+VLNTAVAGKWLDAVLKE+VPRVLP VLWWIHEMRG+
Sbjct: 134 DRGVQVLSAKEQEAVETALKAHLVVLNTAVAGKWLDAVLKENVPRVLPKVLWWIHEMRGN 193
Query: 191 YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDN 250
YFK++YVKHLP VAGAMIDSH TAEYWKNRT +RL I+MP+TYVVHLGNSK+LMEVAE+N
Sbjct: 194 YFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTWDRLGIQMPETYVVHLGNSKDLMEVAENN 253
Query: 251 VAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH 310
VAKRVLREH+RESLGVRNED+LFAIINSVSRGKGQDLFL +F++SL++I++KKL VP +H
Sbjct: 254 VAKRVLREHIRESLGVRNEDILFAIINSVSRGKGQDLFLRAFHQSLQMIQDKKLRVPRIH 313
Query: 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 370
AV++GSDMNA TKFE+ELRN+V + KIQDRVHFVNKTL+VAPYLA+IDVLVQNSQ GEC
Sbjct: 314 AVVVGSDMNAHTKFETELRNFVNENKIQDRVHFVNKTLSVAPYLASIDVLVQNSQGRGEC 373
Query: 371 FGRITIEAMAFQLPVL 386
FGRITIEAMAFQLPVL
Sbjct: 374 FGRITIEAMAFQLPVL 389
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222229|ref|NP_177675.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|30793985|gb|AAP40442.1| unknown protein [Arabidopsis thaliana] gi|110739259|dbj|BAF01543.1| hypothetical protein [Arabidopsis thaliana] gi|332197597|gb|AEE35718.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/372 (75%), Positives = 321/372 (86%), Gaps = 3/372 (0%)
Query: 15 KRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVPRIATKSSPLSFMKS 74
KRW L +L+ LS+ST +R++ + C + ++K +S + +S+PL FMKS
Sbjct: 10 KRWALMVLLFLSVSTVCMILVRSSFETCSISSQFVEEKNGESSAAK---FQSNPLDFMKS 66
Query: 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV 134
KLVLLVSHELSLSGGPLLLMELAFLLRGVG V WIT QKP E+DEV+YSLEHKM DRGV
Sbjct: 67 KLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGV 126
Query: 135 QVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194
QVISAKGQ+ ++T+LKADLIVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF
Sbjct: 127 QVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRGHYFNA 186
Query: 195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR 254
D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEVAED+VAKR
Sbjct: 187 DLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAEDSVAKR 246
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 314
VLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ESLE IKEKKL+VP++HAV++
Sbjct: 247 VLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVV 306
Query: 315 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374
GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRI
Sbjct: 307 GSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRI 366
Query: 375 TIEAMAFQLPVL 386
TIEAMAF+LPVL
Sbjct: 367 TIEAMAFKLPVL 378
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839425|ref|XP_002887594.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297333435|gb|EFH63853.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/372 (75%), Positives = 321/372 (86%), Gaps = 8/372 (2%)
Query: 15 KRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVPRIATKSSPLSFMKS 74
KRW L +L+ LS+ST +R++ + C + D ++ QS +PL+FMKS
Sbjct: 10 KRWALMVLLFLSVSTVCVILVRSSFESCSVGGQFVDSSALRFQS--------NPLAFMKS 61
Query: 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV 134
KLVLLVSHELSLSGGPLLLMELAFLLRGVG +V WIT QKP EEDEV+YSLEHKM DRGV
Sbjct: 62 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPLEEDEVVYSLEHKMLDRGV 121
Query: 135 QVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194
QVISAKGQ+ ++ ALKADLIVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF
Sbjct: 122 QVISAKGQKAVDIALKADLIVLNTAVAGKWLDAVLKENVFKVLPKILWWIHEMRGHYFNP 181
Query: 195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR 254
D VKHLP VAGAMIDSH TAEYW+NRT+ RL IKMP TYVVHLGNSK+LMEVAED+VAKR
Sbjct: 182 DLVKHLPFVAGAMIDSHATAEYWQNRTQARLGIKMPKTYVVHLGNSKDLMEVAEDSVAKR 241
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 314
VLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ESLE+IKEKKL+VP++HAV++
Sbjct: 242 VLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLEIIKEKKLQVPTMHAVVV 301
Query: 315 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374
GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRI
Sbjct: 302 GSDMSRQTKFETELRNFVQEKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRI 361
Query: 375 TIEAMAFQLPVL 386
TIEAMAF+LPVL
Sbjct: 362 TIEAMAFKLPVL 373
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431277|ref|XP_002268739.1| PREDICTED: uncharacterized protein LOC100243789 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 283/386 (73%), Positives = 322/386 (83%), Gaps = 5/386 (1%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVP 60
M +HSA + L K+++ AL+ S+ T + RA CDRH SD + + +P
Sbjct: 1 MARHSAPRF--SLRKKFLFALVFFFSVPTVVFLIKRAPSISCDRH---SDAGVKRFEPLP 55
Query: 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE 120
+ SPLSFMKSK VLLVSHELSLSGGPLLLMELAFLLR VG +V WIT KPSE DE
Sbjct: 56 QFGAAPSPLSFMKSKRVLLVSHELSLSGGPLLLMELAFLLRSVGAEVCWITNHKPSETDE 115
Query: 121 VIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180
VIYSLE+KM RGVQV+ AKG+E IN ALKADL+VLNT +AGKWLD VLKE+VP VLP V
Sbjct: 116 VIYSLENKMQHRGVQVLPAKGREAINRALKADLLVLNTVMAGKWLDDVLKENVPHVLPKV 175
Query: 181 LWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS 240
LWWIHE++GHYF+L+YV+HLPLVA AMIDSHV AEYWK TR+ LRIKMPDTYVVHLGNS
Sbjct: 176 LWWIHEIQGHYFQLEYVRHLPLVAAAMIDSHVAAEYWKTGTRDYLRIKMPDTYVVHLGNS 235
Query: 241 KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIK 300
K+LM++AED+VAKRVLREHVRESLGVR+ED+LFA+INSVSRGKGQDLFL SFYESL+LI
Sbjct: 236 KDLMDIAEDSVAKRVLREHVRESLGVRDEDVLFAMINSVSRGKGQDLFLQSFYESLQLII 295
Query: 301 EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL 360
+KKL VPS+HAVI+GSDM AQ KFES+LR++V KKIQDRVHFVNKTLTVAPYLAAIDVL
Sbjct: 296 QKKLRVPSMHAVIVGSDMTAQPKFESQLRDFVRVKKIQDRVHFVNKTLTVAPYLAAIDVL 355
Query: 361 VQNSQAWGECFGRITIEAMAFQLPVL 386
VQNSQA GECFGRITIEAMAFQLPVL
Sbjct: 356 VQNSQARGECFGRITIEAMAFQLPVL 381
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 396 | ||||||
| TAIR|locus:2018392 | 463 | AT1G75420 [Arabidopsis thalian | 0.931 | 0.796 | 0.690 | 1.4e-133 | |
| TAIR|locus:2013089 | 479 | AT1G19710 [Arabidopsis thalian | 0.974 | 0.805 | 0.665 | 3.5e-130 | |
| TAIR|locus:2093925 | 697 | AT3G15940 [Arabidopsis thalian | 0.494 | 0.281 | 0.267 | 7.8e-20 | |
| TAIR|locus:2018144 | 670 | AT1G52420 [Arabidopsis thalian | 0.494 | 0.292 | 0.285 | 1e-19 |
| TAIR|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 257/372 (69%), Positives = 297/372 (79%)
Query: 15 KRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVPRIATKSSPLSFMXX 74
KRW L +L+ LS+ST +R++ + C + ++K +S + +S+PL FM
Sbjct: 10 KRWALMVLLFLSVSTVCMILVRSSFETCSISSQFVEEKNGESSAAK---FQSNPLDFMKS 66
Query: 75 XXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV 134
GGPLLLMELAFLLRGVG V WIT QKP E+DEV+YSLEHKM DRGV
Sbjct: 67 KLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGV 126
Query: 135 QVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194
QVISAKGQ+ ++T+LKADLIVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF
Sbjct: 127 QVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRGHYFNA 186
Query: 195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR 254
D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEVAED+VAKR
Sbjct: 187 DLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAEDSVAKR 246
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVII 314
VLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ES VP++HAV++
Sbjct: 247 VLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVV 306
Query: 315 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374
GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRI
Sbjct: 307 GSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRI 366
Query: 375 TIEAMAFQLPVL 386
TIEAMAF+LPVL
Sbjct: 367 TIEAMAFKLPVL 378
|
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| TAIR|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 259/389 (66%), Positives = 296/389 (76%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCD-RHLEVSDKKRVQSQ-S 58
M K S + W KRW L +L++LS+ST +R+ D C S +K S
Sbjct: 1 MAKPSTSMWATLQKKRWPLMILLVLSVSTVGMILVRSTFDSCSVSGKRCSREKEDNSDIK 60
Query: 59 VPRIATKSSPLSFMXXXXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEE 118
+ ++ +PL FM GGPLLLMELAFLLRGV ++V WIT QKP EE
Sbjct: 61 IQSVSGSLNPLEFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVESEVVWITNQKPVEE 120
Query: 119 DEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLP 178
DEVI LEHKM DRGVQVISAK Q+ I+TALK+DL+VLNTAVAGKWLDAVLK++VP+VLP
Sbjct: 121 DEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDLVVLNTAVAGKWLDAVLKDNVPKVLP 180
Query: 179 NVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG 238
VLWWIHEMRGHYFK D VKHLP VAGAMIDSH TAEYWKNRT +RL IKMP TYVVHLG
Sbjct: 181 KVLWWIHEMRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYVVHLG 240
Query: 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXX 298
NSKELMEVAED+ AK VLRE VRESLGVRNED+LF IINSVSRGKGQDLFL +F+ES
Sbjct: 241 NSKELMEVAEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKV 300
Query: 299 XXXXXXX-VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 357
VP++HAV++GSDM+AQTKFE+ELRN+V + K+Q VHFVNKT+ VAPYLAAI
Sbjct: 301 IKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAI 360
Query: 358 DVLVQNSQAWGECFGRITIEAMAFQLPVL 386
DVLVQNSQA GECFGRITIEAMAF+LPVL
Sbjct: 361 DVLVQNSQARGECFGRITIEAMAFKLPVL 389
|
|
| TAIR|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 187 (70.9 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 58/217 (26%), Positives = 105/217 (48%)
Query: 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
G P+ +MELA L G V + + + L ++ R ++V+ KG+ + T
Sbjct: 249 GAPISMMELASELLSCGATVYAVVLSRRG-------GLLQELTRRRIKVVEDKGELSFKT 301
Query: 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
A+KADL++ +AV W+D + P + WW+ E R YF LD VK L
Sbjct: 302 AMKADLVIAGSAVCASWIDQYMDHH-PAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIF 360
Query: 203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDNVAKR-- 254
++ +T ++ K R++ + + + D +V + +S + ++ + ++
Sbjct: 361 LSEVQSKQWLTWCEEDHVKLRSQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQ 420
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
LRE VR G+ ++D+L ++S++ GKGQ L L S
Sbjct: 421 KLRESVRTEFGLTDKDMLVMSLSSINPGKGQLLLLES 457
|
|
| TAIR|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 197 (74.4 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 62/217 (28%), Positives = 107/217 (49%)
Query: 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
G P+ +MELA L G V+ + + + L ++ R ++V+ KG+ + T
Sbjct: 247 GAPISMMELASELLSCGATVSAVVLSRRG-------GLMQELSRRRIKVVEDKGELSFKT 299
Query: 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
A+KADLI+ +AV W+D + P + WWI E R YF LD VK L
Sbjct: 300 AMKADLIIAGSAVCTSWIDQYMNHH-PAGGSQIAWWIMENRREYFDRAKPVLDRVKMLIF 358
Query: 203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDN--VAKR 254
++ + +T E+ K R++ + + + D +V + +S ++ + V ++
Sbjct: 359 LSESQSRQWLTWCEEEHIKLRSQPVIVPLSVNDELAFVAGIPSSLNTPTLSPEKMRVKRQ 418
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
+LRE VR LG+ + D+L ++S++ KGQ L L S
Sbjct: 419 ILRESVRTELGITDSDMLVMSLSSINPTKGQLLLLES 455
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00570137 | hypothetical protein (481 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 396 | |||
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-14 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 4e-10 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-07 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-07 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-07 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-06 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 3e-06 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 5e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-05 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 3e-05 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 5e-05 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 5e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 8e-05 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-04 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 4e-04 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 7e-04 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 7e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.003 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 72/326 (22%), Positives = 120/326 (36%), Gaps = 38/326 (11%)
Query: 77 VLLVSHE--LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE--------VIYSLE 126
+LLV+ E S+ G ++ELA L G +V +T DE V
Sbjct: 2 ILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPL 61
Query: 127 HKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKE-DVPRVL-PNVLWWI 184
++ + ++ A + + D++ + +A + +P VL + L +
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFG 121
Query: 185 HEMRGHYFKLDYVKHLPLVAGAMIDSHVT-AEYWKNRTRERLRIKMPDTYVVHLGNSKEL 243
L + L A D + +E + RE + V+ G
Sbjct: 122 RPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNG----- 176
Query: 244 MEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK 303
++ A R R LG+ ++ + + + KG DL L E+L +++
Sbjct: 177 VDTERFRPAPR----AARRRLGIPEDEPVILFVGRLVPRKGVDLLL----EALAKLRK-- 226
Query: 304 LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLV 361
E P V VI+G EL + + DRV F+ + AA DV V
Sbjct: 227 -EYPDVRLVIVGDG-----PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFV 280
Query: 362 QNSQAWGECFGRITIEAMAFQLPVLV 387
S E FG + +EAMA LPV+
Sbjct: 281 LPSLY--EGFGLVLLEAMAAGLPVVA 304
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Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 252 AKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 311
+R+L + + + ++R KGQ++F+ E+L +K+ + P VH
Sbjct: 169 PERILAL--AREWPLPKGKPVILLPGRLTRWKGQEVFI----EALARLKK---DDPDVHL 219
Query: 312 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 371
+I+G + + +EL + + +QDRV FV + A D++V S E F
Sbjct: 220 LIVGDA-QGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE-PEAF 277
Query: 372 GRITIEAMAFQLPVLV 387
GR +EA A PV+
Sbjct: 278 GRTAVEAQAMGRPVIA 293
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WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342
KG D + E+L + +K+ P VH VI+G L + ++DRV
Sbjct: 215 KGIDYLI----EALARLLKKR---PDVHLVIVGDG-----PLREALEALAAELGLEDRVT 262
Query: 343 FV----NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
F+ ++ V Y AA DV V S E FG + +EAMA LPV+
Sbjct: 263 FLGAVPHEE--VPAYYAAADVFVLPS--LREGFGLVLLEAMACGLPVV 306
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wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 280 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 339
S KG D + +F + E P VI+G EL + + D
Sbjct: 199 SPQKGFDTLIRAFALL-------RKEGPDARLVILGDG-----PLREELEALAKELGLAD 246
Query: 340 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386
RVHF+ PYL A D+ V +S+ E F + +EAMA PV+
Sbjct: 247 RVHFLGFQSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVV 291
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 275 IINSVSRG---KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNY 331
II V R KG DL L E+ L+KE+ P++ VI+G + E +L+
Sbjct: 4 IILFVGRLVPEKGLDLLL----EAFALLKEQH---PNLKLVIVGDG-----EEEKKLKKL 51
Query: 332 VMQKKIQDRVHFVN--KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
++ ++D V FV + D+ V S+ E FG + +EAMA +PV+
Sbjct: 52 ALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRY--EGFGLVLLEAMAAGVPVIA 107
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 314
R +R +LGV+N+ + + + K L +F + L + KL +I
Sbjct: 173 ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-------LIA 225
Query: 315 GSDMNAQTKFESELRNYVMQK----KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 370
G + LR + + + +RV + +A Y A D+ V +S AW E
Sbjct: 226 G---------DGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSS-AW-EG 274
Query: 371 FGRITIEAMAFQLPVLV 387
FG + EAMA +LPV+
Sbjct: 275 FGLVVAEAMACELPVVA 291
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRV 341
KG D L E+ ++K K P+V +++G D E+ ++ RV
Sbjct: 201 KGIDELL----EAARILKAKG---PNVRLLLVGDGDEENPAA-ILEIEKLG----LEGRV 248
Query: 342 HFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
F+ V LAA DV V S + E R+ +EAMA PV+
Sbjct: 249 EFLGFRDDVPELLAAADVFVLPS--YREGLPRVLLEAMAMGRPVIA 292
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 316
R +RE LG+ + L I+ + K L + L+ +K P+ +++G
Sbjct: 180 RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA----ALLLKK---FPNARLLLVGD 232
Query: 317 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 376
+ + E + ++D+V + + V L A+DV V +S + E F + +
Sbjct: 233 GPD-RANLELLALK---ELGLEDKVILLGERSDVPALLNALDVFVLSSLS--EGFPNVLL 286
Query: 377 EAMAFQLPVLV 387
EAMA LPV+
Sbjct: 287 EAMACGLPVVA 297
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 46.5 bits (109), Expect = 1e-05
Identities = 61/333 (18%), Positives = 106/333 (31%), Gaps = 45/333 (13%)
Query: 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLE----- 126
MK ++++ + G ++ELA LR +G + I E I L
Sbjct: 1 MKILILIIYPPP-RVGGIERYVLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVS 59
Query: 127 HKMWDRGVQVISAKGQETINTALKADLIVLNTA----VAGKWLDAVLKEDVPRVL----- 177
+ ++ + + L D+I ++ L + +P V+
Sbjct: 60 LPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGL 119
Query: 178 -PNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH 236
P +L + +K L + D + E L + V+
Sbjct: 120 IPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVP-NKIVVIP 178
Query: 237 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 296
G E A + + + + KG DL +
Sbjct: 179 NGIDTEKFAPARIGLLPE-------------GGKFVVLYVGRLDPEKGLDLLI------- 218
Query: 297 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN--KTLTVAPYL 354
E + K P + VI+G + EL + ++D V F+ +A L
Sbjct: 219 EAAAKLKKRGPDIKLVIVGD----GPERREELEKLAKKLGLEDNVKFLGYVPDEELAELL 274
Query: 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
A+ DV V S E FG + +EAMA PV+
Sbjct: 275 ASADVFVLPSL--SEGFGLVLLEAMAAGTPVIA 305
|
Length = 381 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342
KG DL L E+ + + +E+ VI+G+ + + + + RV
Sbjct: 204 KGVDLLL----EAFKRLPRGDIEL-----VIVGNGLELEEESYEL--------EGDPRVE 246
Query: 343 FV--NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
F+ + + A IDVLV S W E F + EA+A +PV+
Sbjct: 247 FLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIA 292
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342
KG DL + ++ + + + KL I+G L + + ++DRV
Sbjct: 191 KGFDLLIEAWAKIAKKHPDWKL-------RIVGDG-----PEREALEALIKELGLEDRVI 238
Query: 343 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
+ T + Y A + V S+ E F + +EAMAF LPV+
Sbjct: 239 LLGFTKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVIS 281
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342
KG DL + +F + E P H VI G D + + +EL+ ++DRV
Sbjct: 216 KGLDLLIEAF----AKLAE---RFPDWHLVIAGPD---EGGYRAELKQIAAALGLEDRVT 265
Query: 343 F---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
F + A A D+ V S + E FG + EA+A PV+
Sbjct: 266 FTGMLYGEDKAAALADA-DLFVLPSHS--ENFGIVVAEALACGTPVVT 310
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 46/190 (24%)
Query: 224 RLRIKMPDTYVVHLGN-SKELMEVA-EDNVAK---------RVLREHVRESLGVRNEDLL 272
RL ++ D +V + L+ A + +A E ++ G+ +L
Sbjct: 129 RLLLRRADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLKALGGLDGRPVL 188
Query: 273 --FAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 330
F ++ KG +L L E+L L+ K P V ++ G ++ E
Sbjct: 189 LTFGLL---RPYKGLELLL----EALPLLVAK---HPDVRLLVAGETHPDLERYRGEAYA 238
Query: 331 YVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLV------QNSQ----AWGECFGRITIE 377
+ + DRV F+N+ L + +A DV+V +Q A+
Sbjct: 239 LAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAY---------- 288
Query: 378 AMAFQLPVLV 387
A+ F PV+
Sbjct: 289 AIGFGKPVIS 298
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 253 KRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV 312
+ V + R LG+ ++ + + +++ K D + +F L+ E P V V
Sbjct: 185 EPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLK-------EEPDVKLV 237
Query: 313 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFV-----NKTLTVAPYLAAIDVLVQNSQAW 367
I+G D EL + + DRV F + + Y A D+ V S
Sbjct: 238 IVG-DGPE----REELEELARELGLADRVIFTGFVPREE---LPDYYKAADLFVFASTT- 288
Query: 368 GECFGRITIEAMAFQLPVLVLSEL 391
E G + +EAMA LPV+ +
Sbjct: 289 -ETQGLVLLEAMAAGLPVVAVDAP 311
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 325 ESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP 384
S + +QD V F+ K V L+ D+ + S+ E FG +EAMA +P
Sbjct: 239 RSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEK--ESFGLAALEAMACGVP 296
Query: 385 VLV 387
V+
Sbjct: 297 VVA 299
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 4e-04
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 19/157 (12%)
Query: 234 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 293
L ++ V N + +L + D +F + ++ KG D + +F
Sbjct: 70 AARLLGIPLVLTVHGVNRSLLEGVPLSLLALSIGLADKVF--VGRLAPEKGLDDLIEAF- 126
Query: 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV---NKTLTV 350
K P + VI G + E + DRV F+ + +
Sbjct: 127 ------ALLKERGPDLKLVIAGDGPEREYLEELLAALL-----LLDRVIFLGGLDPEELL 175
Query: 351 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
A LAA DV V S E FG + +EAMA LPV+
Sbjct: 176 ALLLAAADVFVLPS--LREGFGLVVLEAMACGLPVIA 210
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 326 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385
S V + + DRV F+ K VA L+ D+ + S+ E FG +EAMA +PV
Sbjct: 242 SPAEQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSEK--ESFGLAALEAMACGVPV 299
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 7e-04
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 305 EVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLV 361
+P VI+G + E+EL + DRV F+ + A LAA DV V
Sbjct: 215 ALPDAPLVIVGEGPL------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268
Query: 362 QNSQAWGECFGRITIEAMAFQLPV 385
S E FG + +EAMAF PV
Sbjct: 269 FPSVERSEAFGIVLLEAMAFGKPV 292
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT 349
H F +E+ E + P+ +++G + E E++ V + ++D+V F+
Sbjct: 207 HEF--LIEIFAELLKKNPNAKLLLVG-----DGELEEEIKKKVKELGLEDKVIFLGVRND 259
Query: 350 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
V L A+DV + S E + IEA A LP ++
Sbjct: 260 VPELLQAMDVFLFPSLY--EGLPLVLIEAQASGLPCIL 295
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 396 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.98 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.98 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.98 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.98 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.98 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.98 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.97 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.97 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.97 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.97 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.96 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.96 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.96 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.96 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.96 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.95 | |
| PLN00142 | 815 | sucrose synthase | 99.95 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.95 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.95 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.95 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.95 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.94 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.93 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.93 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.92 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.91 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.91 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.91 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.89 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.89 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.88 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.88 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.88 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.88 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.87 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.84 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.83 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.81 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.8 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.8 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.77 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.75 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.75 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.7 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.68 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.63 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.55 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.52 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.52 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.48 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.4 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.4 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.32 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.24 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.23 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.22 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.2 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.07 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.05 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.98 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.97 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.95 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.94 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.91 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.86 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.76 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.76 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.76 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.74 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.74 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.72 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.7 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.7 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.63 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.57 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.49 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.48 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.41 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.3 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.26 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.23 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.21 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.12 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.04 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.99 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.82 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.75 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.75 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.72 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.62 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.47 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 96.92 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.83 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 96.8 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.78 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.71 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 96.48 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 96.37 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.07 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 95.73 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 95.67 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.62 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 95.43 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.41 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 95.23 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 95.12 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 95.03 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 94.8 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 94.7 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.62 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 94.55 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 94.54 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 94.44 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 94.26 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 93.87 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 93.59 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 93.15 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 93.04 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 92.97 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 92.82 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 92.76 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 92.18 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 92.03 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 91.8 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 91.49 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 90.86 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 90.36 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 90.04 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 89.83 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 89.49 | |
| PRK09739 | 199 | hypothetical protein; Provisional | 88.96 | |
| PF03853 | 169 | YjeF_N: YjeF-related protein N-terminus; InterPro: | 88.27 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 88.25 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 88.03 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 87.37 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 86.46 | |
| cd03146 | 212 | GAT1_Peptidase_E Type 1 glutamine amidotransferase | 85.89 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 83.3 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 83.16 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 82.72 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 82.05 | |
| cd03129 | 210 | GAT1_Peptidase_E_like Type 1 glutamine amidotransf | 81.26 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 80.2 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=275.39 Aligned_cols=290 Identities=15% Similarity=0.155 Sum_probs=209.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-----------h
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ-----------E 143 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 143 (396)
.+|+++.+....||+++++.+++++|.+.||++.+++..+.. .+...+...++.++..... .
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 74 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVS-------AFRKRIQRPDVAFYALHKQPGKDVAVYPQLY 74 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCC-------hhHHHHHhcCceEEEeCCCCCCChHHHHHHH
Confidence 489999999999999999999999999999999988843221 1444455556666544321 2
Q ss_pred hhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCc-hh----hh-c-cccccccceeeccccHHH
Q 016053 144 TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-LD----YV-K-HLPLVAGAMIDSHVTAEY 216 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~-~~----~~-~-~~~~~~~~~~~s~~~~~~ 216 (396)
.+.+..+||+||+|+.........+...+++ ..+++.|........ .. +. + ..+..+.+++.|....++
T Consensus 75 ~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~----~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~ 150 (374)
T TIGR03088 75 RLLRQLRPDIVHTRNLAALEAQLPAALAGVP----ARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDW 150 (374)
T ss_pred HHHHHhCCCEEEEcchhHHHHHHHHHhcCCC----eEEEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHH
Confidence 2345689999999986443222223333333 123333432111111 01 11 1 123456677777766655
Q ss_pred HHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHH
Q 016053 217 WKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 296 (396)
Q Consensus 217 ~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~ 296 (396)
+.+ .++++.+++.+||||+|.+.|.+.... +...++.....++.++|+++||+.+.||++.+++|+.++.
T Consensus 151 ~~~----~~~~~~~~~~vi~ngvd~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 151 LRG----PVKVPPAKIHQIYNGVDTERFHPSRGD------RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred HHH----hcCCChhhEEEeccCccccccCCCccc------hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 443 567777889999999999887543211 1223333444577899999999999999999999999987
Q ss_pred HHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHH
Q 016053 297 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 376 (396)
Q Consensus 297 ~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~l 376 (396)
++.++ ..++++|+++|+|+ ..+.+++.++++++++++.|.|..+|+.++|++||++|+||. .|+||++++
T Consensus 221 ~~~~~---~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~--~Eg~~~~~l 290 (374)
T TIGR03088 221 RQLPE---GAERLRLVIVGDGP-----ARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSL--AEGISNTIL 290 (374)
T ss_pred HhCcc---cccceEEEEecCCc-----hHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccc--cccCchHHH
Confidence 64432 12479999999986 668899999999999999999999999999999999999999 999999999
Q ss_pred HHHhcCCCEEEcCCCCCCC
Q 016053 377 EAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 377 EAma~G~PVI~t~~gG~~~ 395 (396)
|||+||+|||+|+.||.++
T Consensus 291 EAma~G~Pvv~s~~~g~~e 309 (374)
T TIGR03088 291 EAMASGLPVIATAVGGNPE 309 (374)
T ss_pred HHHHcCCCEEEcCCCCcHH
Confidence 9999999999999999764
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=277.71 Aligned_cols=275 Identities=17% Similarity=0.104 Sum_probs=202.1
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC-------------
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------- 140 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 140 (396)
||+++++...+ ||.++++.+++++|.++||+|+|++...+.. ........++.+...+
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~-------~~~~~~~~~i~v~~~p~~~~~~~~~~~~~ 73 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNR-------VGIRYLTNGLKVYYLPFVVFYNQSTLPTF 73 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcC-------CCcccccCceeEEEecceeccCCccccch
Confidence 68999886444 8889999999999999999999999543211 0001112233332221
Q ss_pred -----chhhhhhccCCcEEEEcCchhhHHHH---HHHhcCCCccccceeeeeeeccccc------Cchhhhccccccccc
Q 016053 141 -----GQETINTALKADLIVLNTAVAGKWLD---AVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGA 206 (396)
Q Consensus 141 -----~~~~~~~~~~~DiV~~~~~~~~~~~~---~~~~~~~~~~~~~vv~~~h~~~~~~------~~~~~~~~~~~~~~~ 206 (396)
..+......+||+||+|++....... .+...+ .+++++.|+..+.. ........++..+.+
T Consensus 74 ~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~-----~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~i 148 (398)
T cd03796 74 FGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMG-----LKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHV 148 (398)
T ss_pred hhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcC-----CcEEEEecccccccchhhHHhhHHHHHhhccCCEE
Confidence 11233345799999999865433211 122233 45788888753211 011112234677888
Q ss_pred eeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 207 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
++.|....+.+.. ..+++.+++.+||||+|.+.|.+.... .++++++|+++|++.+.||++
T Consensus 149 i~~s~~~~~~~~~----~~~~~~~k~~vi~ngvd~~~f~~~~~~---------------~~~~~~~i~~~grl~~~Kg~~ 209 (398)
T cd03796 149 ICVSHTSKENTVL----RASLDPERVSVIPNAVDSSDFTPDPSK---------------RDNDKITIVVISRLVYRKGID 209 (398)
T ss_pred EEecHhHhhHHHH----HhCCChhhEEEEcCccCHHHcCCCccc---------------CCCCceEEEEEeccchhcCHH
Confidence 8888776654322 345677889999999999887643210 235778999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecC
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS 364 (396)
.+++|++++.+ +.++++|+|+|+|+ ..+.++++++++++.++|+|+|.+ +++.++|++||++++||
T Consensus 210 ~li~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS 277 (398)
T cd03796 210 LLVGIIPEICK-------KHPNVRFIIGGDGP-----KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTS 277 (398)
T ss_pred HHHHHHHHHHh-------hCCCEEEEEEeCCc-----hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCC
Confidence 99999998765 34899999999986 678899999999999999999986 78999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 365 QAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 365 ~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
. .|+||++++||||||+|||+|+.||.++
T Consensus 278 ~--~E~~g~~~~EAma~G~PVI~s~~gg~~e 306 (398)
T cd03796 278 L--TEAFCIAIVEAASCGLLVVSTRVGGIPE 306 (398)
T ss_pred h--hhccCHHHHHHHHcCCCEEECCCCCchh
Confidence 9 9999999999999999999999999764
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=264.66 Aligned_cols=283 Identities=18% Similarity=0.224 Sum_probs=208.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc-----------hhh
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-----------QET 144 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 144 (396)
||+++++....||+++++.+++++|.+.||+|++++...... .........++.++.... ...
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG------DYDDEIEKLGGKIYYIPARKKNPLKYFKKLYK 74 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCc------chHHHHHHcCCeEEEecCCCccHHHHHHHHHH
Confidence 689999888889999999999999999999999999654321 122233334555543221 112
Q ss_pred hhhccCCcEEEEcCchhhHHHHHHHh-cCCCccccceeeeeeeccccc--Cchh------hhccccccccceeeccccHH
Q 016053 145 INTALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHY--FKLD------YVKHLPLVAGAMIDSHVTAE 215 (396)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~h~~~~~~--~~~~------~~~~~~~~~~~~~~s~~~~~ 215 (396)
+....+||+||+|............+ .+. +..+.+.|...... .... ........+.+++.+....+
T Consensus 75 ~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 150 (358)
T cd03812 75 LIKKNKYDIVHVHGSSASGFILLAAKKAGV----KVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGK 150 (358)
T ss_pred HHhcCCCCEEEEeCcchhHHHHHHHhhCCC----CeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHH
Confidence 23458999999998654333232222 232 23456666643111 1111 11223456777777776666
Q ss_pred HHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHH
Q 016053 216 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES 295 (396)
Q Consensus 216 ~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l 295 (396)
.+.+ . ....++.+||||+|.+.+.+.+.. ++. ++..+..++++.|+++|++.+.||++.+++|+..+
T Consensus 151 ~~~~----~--~~~~~~~vi~ngvd~~~~~~~~~~------~~~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l 217 (358)
T cd03812 151 WLFG----K--VKNKKFKVIPNGIDLEKFIFNEEI------RKK-RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAEL 217 (358)
T ss_pred HHHh----C--CCcccEEEEeccCcHHHcCCCchh------hhH-HHHcCCCCCCEEEEEEeccccccChHHHHHHHHHH
Confidence 5443 2 356789999999999877654211 122 56677778899999999999999999999999998
Q ss_pred HHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHH
Q 016053 296 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT 375 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~ 375 (396)
.+ ++++++++|+|+|+ ..+.+++.++++++.++|+|+|+.+++.++|+.||++|+||. .|+||+++
T Consensus 218 ~~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~E~~~~~~ 283 (358)
T cd03812 218 LK-------KNPNAKLLLVGDGE-----LEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSL--YEGLPLVL 283 (358)
T ss_pred HH-------hCCCeEEEEEeCCc-----hHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEeccc--ccCCCHHH
Confidence 76 34899999999986 678888999999999999999999999999999999999999 99999999
Q ss_pred HHHHhcCCCEEEcCCCCCCC
Q 016053 376 IEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 376 lEAma~G~PVI~t~~gG~~~ 395 (396)
+||||+|+|||+|+.||.+.
T Consensus 284 lEAma~G~PvI~s~~~~~~~ 303 (358)
T cd03812 284 IEAQASGLPCILSDTITKEV 303 (358)
T ss_pred HHHHHhCCCEEEEcCCchhh
Confidence 99999999999999999753
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=283.63 Aligned_cols=303 Identities=17% Similarity=0.144 Sum_probs=213.6
Q ss_pred cccEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh--h------------hhhcce
Q 016053 73 KSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH--K------------MWDRGV 134 (396)
Q Consensus 73 ~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~--~------------~~~~~~ 134 (396)
.+|+|+||+.+..+ ||..-++..|.++|++.||+|.|+++............+.. . ....|+
T Consensus 586 ~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV 665 (1036)
T PLN02316 586 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGL 665 (1036)
T ss_pred CCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCc
Confidence 34799999977433 88889999999999999999999997543211000000000 0 011234
Q ss_pred EEEEcCch----------------h-----------hhh-hccCCcEEEEcCchhhHHHHHHHhcC--CCccccceeeee
Q 016053 135 QVISAKGQ----------------E-----------TIN-TALKADLIVLNTAVAGKWLDAVLKED--VPRVLPNVLWWI 184 (396)
Q Consensus 135 ~~~~~~~~----------------~-----------~~~-~~~~~DiV~~~~~~~~~~~~~~~~~~--~~~~~~~vv~~~ 184 (396)
.++.+... . .+. ...+|||||+|+..++.....+.... ......++++++
T Consensus 666 ~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~Ti 745 (1036)
T PLN02316 666 SVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTI 745 (1036)
T ss_pred EEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEe
Confidence 43322111 0 000 12589999999976555433333210 011235789999
Q ss_pred eecccccCchhhhccccccccceeeccccHHHHHHHHHhhhccc--CCCEEEEecCCccchhhhhhhh------------
Q 016053 185 HEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK--MPDTYVVHLGNSKELMEVAEDN------------ 250 (396)
Q Consensus 185 h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~--~~k~~vI~ngid~~~~~~~~~~------------ 250 (396)
|+.. +........+..++.++++|...+..+.. ...+. ..|+.+|+||||.+.|.|..+.
T Consensus 746 Hnl~--~~~n~lk~~l~~AD~ViTVS~tya~EI~~----~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 746 HNLE--FGANHIGKAMAYADKATTVSPTYSREVSG----NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred CCcc--cchhHHHHHHHHCCEEEeCCHHHHHHHHh----ccCcccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 9762 21112334556889999999887766553 22232 4789999999999987664321
Q ss_pred HHHHHhHHHHHHHcCCCC-CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHH
Q 016053 251 VAKRVLREHVRESLGVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR 329 (396)
Q Consensus 251 ~~~~~~~~~~r~~~g~~~-~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~ 329 (396)
..+...+..+++++|++. +.++|+++||+.++||++.|++|+..+.+ .+++|+|+|+|++ ..+++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~---------~~~qlVIvG~Gpd--~~~e~~l~ 888 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE---------RNGQVVLLGSAPD--PRIQNDFV 888 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh---------cCcEEEEEeCCCC--HHHHHHHH
Confidence 112344667899999974 67999999999999999999999998764 5799999999863 24578899
Q ss_pred HHHHhcCC--CCcEEEecCcCCH--HHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 330 NYVMQKKI--QDRVHFVNKTLTV--APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 330 ~~~~~~~l--~~~V~~~g~~~~~--~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++++ +++|.|.|..++. ..+|++||+||+||. .|+||++.+|||+||+|+|++++||..
T Consensus 889 ~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs~vGGL~ 955 (1036)
T PLN02316 889 NLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVRKTGGLF 955 (1036)
T ss_pred HHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEEcCCCcH
Confidence 99998865 5789999876553 379999999999999 999999999999999999999999975
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=272.67 Aligned_cols=305 Identities=17% Similarity=0.154 Sum_probs=209.5
Q ss_pred cEEEEEeccCC----CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhh--hhhhh---------hhhhcceEEEEc
Q 016053 75 KLVLLVSHELS----LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVI--YSLEH---------KMWDRGVQVISA 139 (396)
Q Consensus 75 ~kIl~v~~~~~----~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~ 139 (396)
|||++++.+.. .||...++..|+++|+++||+|.|+++..+.-..... ..... .....|++++.+
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 58999997732 3888999999999999999999999965332110000 00000 001235555422
Q ss_pred Cchh--------------------------hhh-hccCCcEEEEcCchhhHHHHHHHhcC-CCccccceeeeeeecccc-
Q 016053 140 KGQE--------------------------TIN-TALKADLIVLNTAVAGKWLDAVLKED-VPRVLPNVLWWIHEMRGH- 190 (396)
Q Consensus 140 ~~~~--------------------------~~~-~~~~~DiV~~~~~~~~~~~~~~~~~~-~~~~~~~vv~~~h~~~~~- 190 (396)
.... .+. ...+||+||+|+..++.....+.... ......++++++|+....
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g 160 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQG 160 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCC
Confidence 1100 000 11489999999977665544444221 111125689999986311
Q ss_pred cCc---------------hhh----------hccccccccceeeccccHHHHHHH-----HHhhhcccCCCEEEEecCCc
Q 016053 191 YFK---------------LDY----------VKHLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNS 240 (396)
Q Consensus 191 ~~~---------------~~~----------~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~g~~~~k~~vI~ngid 240 (396)
.+. ... ...+..++.++++|...++.+.+. +...++....|+.+|+||+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid 240 (466)
T PRK00654 161 LFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGID 240 (466)
T ss_pred cCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCC
Confidence 010 000 012456788888888877665531 11122345678999999999
Q ss_pred cchhhhhhhh-----------HHHHHhHHHHHHHcCCCC-CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCC
Q 016053 241 KELMEVAEDN-----------VAKRVLREHVRESLGVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS 308 (396)
Q Consensus 241 ~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~-~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~ 308 (396)
.+.|.+..++ ..+...+..+++++|+++ +.++|+++||+.++||++.+++|++++.+ .+
T Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~---------~~ 311 (466)
T PRK00654 241 YDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE---------QG 311 (466)
T ss_pred ccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh---------cC
Confidence 9988764321 012334667899999975 67899999999999999999999998864 47
Q ss_pred EEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE-EecCcCC-HHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 309 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 309 ~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~~~~-~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
++|+|+|+|. ..+.+.+++++++++ .++. +.|+.++ +..+|++||++|+||. .|+||++++|||+||+|+|
T Consensus 312 ~~lvivG~g~---~~~~~~l~~l~~~~~--~~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V 384 (466)
T PRK00654 312 GQLVLLGTGD---PELEEAFRALAARYP--GKVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPI 384 (466)
T ss_pred CEEEEEecCc---HHHHHHHHHHHHHCC--CcEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEE
Confidence 9999999875 235678899998876 4565 4566544 5689999999999999 9999999999999999999
Q ss_pred EcCCCCCCC
Q 016053 387 VLSELHPSI 395 (396)
Q Consensus 387 ~t~~gG~~~ 395 (396)
++++||...
T Consensus 385 ~~~~gG~~e 393 (466)
T PRK00654 385 VRRTGGLAD 393 (466)
T ss_pred EeCCCCccc
Confidence 999999753
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=278.63 Aligned_cols=288 Identities=15% Similarity=0.151 Sum_probs=197.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCC--------------EEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGT--------------KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG 141 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~--------------~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (396)
||+++.+....||+|+++.+|+.+|.+.++ +|.+++........ .+...+...|+++.....
T Consensus 283 rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~----~~~~~L~~~Gv~v~~l~~ 358 (694)
T PRK15179 283 PVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGAD----FFAATLADAGIPVSVYSD 358 (694)
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcc----hHHHHHHhCCCeEEEecc
Confidence 899999999999999999999999999854 45554321100000 133344445555533211
Q ss_pred h---------------------------------hhhhhccCCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeec
Q 016053 142 Q---------------------------------ETINTALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEM 187 (396)
Q Consensus 142 ~---------------------------------~~~~~~~~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~ 187 (396)
. ..+.+..+||+||+|...+..+...+. ..++|. ++.+.|..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPv----Iv~t~h~~ 434 (694)
T PRK15179 359 MQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPR----IVLSVRTM 434 (694)
T ss_pred CCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCE----EEEEeCCC
Confidence 1 123355799999999876654433332 233332 23344543
Q ss_pred ccccCchhh----h---ccccccccc--eeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHH
Q 016053 188 RGHYFKLDY----V---KHLPLVAGA--MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLRE 258 (396)
Q Consensus 188 ~~~~~~~~~----~---~~~~~~~~~--~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~ 258 (396)
........+ . ..+...+.. +++|.... +.+.+.++++.+++.|||||+|.+.|.+.+.... .+.
T Consensus 435 ~~~~~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~----~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~---~~~ 507 (694)
T PRK15179 435 PPVDRPDRYRVEYDIIYSELLKMRGVALSSNSQFAA----HRYADWLGVDERRIPVVYNGLAPLKSVQDDACTA---MMA 507 (694)
T ss_pred ccccchhHHHHHHHHHHHHHHhcCCeEEEeCcHHHH----HHHHHHcCCChhHEEEECCCcCHHhcCCCchhhH---HHH
Confidence 221111111 1 111222322 33333333 3333356888889999999999887754221100 011
Q ss_pred HHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC
Q 016053 259 HVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ 338 (396)
Q Consensus 259 ~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~ 338 (396)
.+ ....+++.++|+++||+.+.||++.+++|++++.+ +.++++|+|+|+|+ +.+.++++++++++.
T Consensus 508 ~~--~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~-------~~p~~~LvIvG~G~-----~~~~L~~l~~~lgL~ 573 (694)
T PRK15179 508 QF--DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAA-------SHPKVRFIMVGGGP-----LLESVREFAQRLGMG 573 (694)
T ss_pred hh--ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHH-------HCcCeEEEEEccCc-----chHHHHHHHHHcCCC
Confidence 11 12234567899999999999999999999998865 33899999999986 778999999999999
Q ss_pred CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 339 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++|+|+|+++++..+|+++|++|+||. +|+||++++|||+||+|||+|++||..
T Consensus 574 ~~V~flG~~~dv~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~ 627 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAG 627 (694)
T ss_pred CcEEEcCCcchHHHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChH
Confidence 999999999999999999999999999 999999999999999999999999964
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=260.54 Aligned_cols=280 Identities=18% Similarity=0.196 Sum_probs=209.0
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--------------hhhhhh
Q 016053 82 HELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------------QETINT 147 (396)
Q Consensus 82 ~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 147 (396)
+....||+++++.+++++|.++||+|.+++.... ....+...+++++.... ...+..
T Consensus 5 ~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 75 (355)
T cd03819 5 PALESGGVERGTLELARALVERGHRSLVASAGGR---------LVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIR 75 (355)
T ss_pred hhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCCc---------hHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHH
Confidence 4456699999999999999999999999986443 12222333444433211 112234
Q ss_pred ccCCcEEEEcCchhhHHHHHH-HhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhc
Q 016053 148 ALKADLIVLNTAVAGKWLDAV-LKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR 226 (396)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g 226 (396)
..+||+||+|+.........+ ...+ .+++++.|+.... ...+...+...+.+++.|....+.+. +.++
T Consensus 76 ~~~~dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~--~~~~~~~~~~~~~vi~~s~~~~~~~~----~~~~ 144 (355)
T cd03819 76 EEKVDIVHARSRAPAWSAYLAARRTR-----PPFVTTVHGFYSV--NFRYNAIMARGDRVIAVSNFIADHIR----ENYG 144 (355)
T ss_pred HcCCCEEEECCCchhHHHHHHHHhcC-----CCEEEEeCCchhh--HHHHHHHHHhcCEEEEeCHHHHHHHH----HhcC
Confidence 579999999985443322222 2222 5578888876321 11334455677888888877766654 3567
Q ss_pred ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 306 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~ 306 (396)
++..++.+||||+|.+.|.+.... ......++++++.+++.++++++|++.+.||++.+++++..+.+ ++
T Consensus 145 ~~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~-------~~ 214 (355)
T cd03819 145 VDPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK-------DD 214 (355)
T ss_pred CChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh-------cC
Confidence 788899999999999887643221 11123368888888889999999999999999999999999875 23
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecC-CCCCCCccHHHHHHHhcCCCE
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS-QAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS-~~~~E~fg~~~lEAma~G~PV 385 (396)
++++++|+|.+...+ .+.+.+.+.++++++.++|+|+|+.+++.++|++||++++|| . .|+||++++||||||+||
T Consensus 215 ~~~~l~ivG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~--~e~~~~~l~EA~a~G~Pv 291 (355)
T cd03819 215 PDVHLLIVGDAQGRR-FYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE--PEAFGRTAVEAQAMGRPV 291 (355)
T ss_pred CCeEEEEEECCcccc-hHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCC--CCCCchHHHHHHhcCCCE
Confidence 789999999886432 356667788888899899999999999999999999999999 6 899999999999999999
Q ss_pred EEcCCCCCC
Q 016053 386 LVLSELHPS 394 (396)
Q Consensus 386 I~t~~gG~~ 394 (396)
|+++.||..
T Consensus 292 I~~~~~~~~ 300 (355)
T cd03819 292 IASDHGGAR 300 (355)
T ss_pred EEcCCCCcH
Confidence 999998865
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=266.61 Aligned_cols=305 Identities=17% Similarity=0.175 Sum_probs=210.3
Q ss_pred ccccEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhh--h---hhhhhhh---------hhcc
Q 016053 72 MKSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEV--I---YSLEHKM---------WDRG 133 (396)
Q Consensus 72 m~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~--~---~~~~~~~---------~~~~ 133 (396)
|++|||+|++++..+ ||-.-++..|.++|+++||+|.|+++.-..-.... . ..+.... ...|
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG 80 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence 567899999988444 88889999999999999999999997543211000 0 0000000 0113
Q ss_pred eEEEEcCch-----------------------h---------h----hhhccCCcEEEEcCchhhHHHHHHHhcCCCccc
Q 016053 134 VQVISAKGQ-----------------------E---------T----INTALKADLIVLNTAVAGKWLDAVLKEDVPRVL 177 (396)
Q Consensus 134 ~~~~~~~~~-----------------------~---------~----~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~ 177 (396)
+.++-+... + . .....+|||||+|+..++.....+..... ..
T Consensus 81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~--~~ 158 (485)
T PRK14099 81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGR--PA 158 (485)
T ss_pred ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCC--CC
Confidence 333211000 0 0 00125899999999776654443332211 12
Q ss_pred cceeeeeeecccc-cCch------------------h-------hhccccccccceeeccccHHHHHHHH-----Hhhhc
Q 016053 178 PNVLWWIHEMRGH-YFKL------------------D-------YVKHLPLVAGAMIDSHVTAEYWKNRT-----RERLR 226 (396)
Q Consensus 178 ~~vv~~~h~~~~~-~~~~------------------~-------~~~~~~~~~~~~~~s~~~~~~~~~~~-----~~~~g 226 (396)
.+.++++|+.... .+.. . ....+..++.++++|...++.+.+.. ...++
T Consensus 159 ~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~ 238 (485)
T PRK14099 159 PGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLR 238 (485)
T ss_pred CCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHH
Confidence 5689999986311 0100 0 11223578888899988887765321 00112
Q ss_pred ccCCCEEEEecCCccchhhhhhhhH-----------HHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHHH
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~-----------~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
....++.+|+||+|.+.|.+..++. .+...+..+++++|++. +.++|+++||+.++||++.+++|+.
T Consensus 239 ~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~ 318 (485)
T PRK14099 239 QRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALP 318 (485)
T ss_pred hhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHH
Confidence 3467899999999999887654321 12234567899999964 5688999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE-EEecCcCCHHHHHH-HcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV-HFVNKTLTVAPYLA-AIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V-~~~g~~~~~~~~~~-~aDv~v~pS~~~~E~f 371 (396)
.+.+ .+++|+|+|+|. ..+++.+++++++++ +++ .|+|+.+++..+|. .||++|+||. .|+|
T Consensus 319 ~l~~---------~~~~lvivG~G~---~~~~~~l~~l~~~~~--~~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~f 382 (485)
T PRK14099 319 TLLG---------EGAQLALLGSGD---AELEARFRAAAQAYP--GQIGVVIGYDEALAHLIQAGADALLVPSR--FEPC 382 (485)
T ss_pred HHHh---------cCcEEEEEecCC---HHHHHHHHHHHHHCC--CCEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCC
Confidence 8764 479999999985 235778888888765 455 78999888999874 6999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++.+|||+||+|+|++++||..
T Consensus 383 Gl~~lEAma~G~ppVvs~~GGl~ 405 (485)
T PRK14099 383 GLTQLCALRYGAVPVVARVGGLA 405 (485)
T ss_pred cHHHHHHHHCCCCcEEeCCCCcc
Confidence 99999999999988889999975
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=260.72 Aligned_cols=283 Identities=18% Similarity=0.164 Sum_probs=203.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE--Ec-------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SA------------- 139 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------- 139 (396)
|||+++++ ...||.++++.+++++|.++||+|++++...+..... ...++.+. ..
T Consensus 1 mki~~~~~-p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (371)
T cd04962 1 MKIGIVCY-PTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDE---------YSPNIFFHEVEVPQYPLFQYPPYDL 70 (371)
T ss_pred CceeEEEE-eCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhh---------hccCeEEEEecccccchhhcchhHH
Confidence 47888875 3459999999999999999999999998543311000 00111110 00
Q ss_pred ---CchhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc------Cchhhhccccccccceeec
Q 016053 140 ---KGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDS 210 (396)
Q Consensus 140 ---~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s 210 (396)
.......+..+||+||+|.+...................+++++.|+..... +.......++.++.+++.|
T Consensus 71 ~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 150 (371)
T cd04962 71 ALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVS 150 (371)
T ss_pred HHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcC
Confidence 0111223457999999997543222221111101111255788888653111 1111223345778888888
Q ss_pred cccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 211 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
....+.+.+ .++ ...++.+||||+|...+.+.. ....+++++.++++++++++|++.+.||++.+++
T Consensus 151 ~~~~~~~~~----~~~-~~~~i~vi~n~~~~~~~~~~~--------~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 151 ESLRQETYE----LFD-ITKEIEVIPNFVDEDRFRPKP--------DEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred HHHHHHHHH----hcC-CcCCEEEecCCcCHhhcCCCc--------hHHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 776665543 332 456799999999987765432 2335677888888999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
|+.++.+. .+++|+++|.|+ +.+.+++++++++++++|+|+|+++++.++|+.||++|+||. .|+
T Consensus 218 a~~~l~~~--------~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~--~E~ 282 (371)
T cd04962 218 IFAKVRKE--------VPARLLLVGDGP-----ERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSE--KES 282 (371)
T ss_pred HHHHHHhc--------CCceEEEEcCCc-----CHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCC--cCC
Confidence 99987542 478999999986 567888999999999999999999999999999999999999 999
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
||++++|||+||+|||+|+.||.+.
T Consensus 283 ~~~~~~EAma~g~PvI~s~~~~~~e 307 (371)
T cd04962 283 FGLAALEAMACGVPVVASNAGGIPE 307 (371)
T ss_pred CccHHHHHHHcCCCEEEeCCCCchh
Confidence 9999999999999999999998753
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=258.59 Aligned_cols=289 Identities=19% Similarity=0.182 Sum_probs=203.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc--------Cchhhhhh
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--------KGQETINT 147 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 147 (396)
+||++++....||+++.+.+++++|.++||+|++++..+....... ........+..... .....+.+
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPP----IDATIILNLNMSKNPLSFLLALWKLRKILR 76 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccch----hhccceEEecccccchhhHHHHHHHHHHHH
Confidence 4889988888899999999999999999999999984432211100 00000000000000 00123344
Q ss_pred ccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh-hhccc-cccccceeeccccHHHHHHHHHhhh
Q 016053 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-YVKHL-PLVAGAMIDSHVTAEYWKNRTRERL 225 (396)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (396)
..+||+||+|......+...+... . ..++++.+.|+......... ..+.. ...+..+..+... .+.+.+..
T Consensus 77 ~~~pdiv~~~~~~~~~~~~l~~~~-~--~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~~~~~~~~ 149 (360)
T cd04951 77 QFKPDVVHAHMFHANIFARLLRLF-L--PSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEA----LDYFIASK 149 (360)
T ss_pred hcCCCEEEEcccchHHHHHHHHhh-C--CCCcEEEEeeccCchhHHHHHHHHHHhhccCceEEEcHHH----HHHHHhcc
Confidence 579999999986554433333222 1 12567778887632110001 11111 1223333334333 33333344
Q ss_pred cccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccC
Q 016053 226 RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLE 305 (396)
Q Consensus 226 g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~ 305 (396)
+++.+++.+||||+|.+.+.+... .....++++++++++++++++|++.+.||++.+++++.++.+ +
T Consensus 150 ~~~~~~~~~i~ng~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~-------~ 216 (360)
T cd04951 150 AFNANKSFVVYNGIDTDRFRKDPA------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS-------D 216 (360)
T ss_pred CCCcccEEEEccccchhhcCcchH------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHh-------h
Confidence 466788999999999887754321 234578889998889999999999999999999999998865 3
Q ss_pred CCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 306 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 306 ~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
+++++|+|+|+|+ ..+++++.++++++.++|.|+|+++++.++|+.||++++||. .|+||++++|||++|+||
T Consensus 217 ~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~Pv 289 (360)
T cd04951 217 YLDIKLLIAGDGP-----LRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPV 289 (360)
T ss_pred CCCeEEEEEcCCC-----cHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCE
Confidence 3799999999986 667888999999998999999999999999999999999999 999999999999999999
Q ss_pred EEcCCCCCCC
Q 016053 386 LVLSELHPSI 395 (396)
Q Consensus 386 I~t~~gG~~~ 395 (396)
|+++.||...
T Consensus 290 I~~~~~~~~e 299 (360)
T cd04951 290 VATDAGGVRE 299 (360)
T ss_pred EEecCCChhh
Confidence 9999998753
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=272.61 Aligned_cols=307 Identities=15% Similarity=0.123 Sum_probs=215.5
Q ss_pred cccEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhh-----------hhhh--------h
Q 016053 73 KSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS-----------LEHK--------M 129 (396)
Q Consensus 73 ~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-----------~~~~--------~ 129 (396)
+.|+|+||+.+..+ ||-.-++..|.++|++.||+|.|+++....-....... +... .
T Consensus 480 ~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~ 559 (977)
T PLN02939 480 SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTG 559 (977)
T ss_pred CCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEE
Confidence 44699999987443 88899999999999999999999997544221000000 0000 0
Q ss_pred hhcceEEEEcCc------h-------------h---------hhhh--ccCCcEEEEcCchhhHHHHHHHh----cCCCc
Q 016053 130 WDRGVQVISAKG------Q-------------E---------TINT--ALKADLIVLNTAVAGKWLDAVLK----EDVPR 175 (396)
Q Consensus 130 ~~~~~~~~~~~~------~-------------~---------~~~~--~~~~DiV~~~~~~~~~~~~~~~~----~~~~~ 175 (396)
...|+.++-+.. + + .+.. ..+|||||||+...+.....+.. .++
T Consensus 560 ~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~-- 637 (977)
T PLN02939 560 TVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF-- 637 (977)
T ss_pred EECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC--
Confidence 112444432210 0 0 0001 26899999999776654222221 122
Q ss_pred cccceeeeeeecc--cccCc---------hhhh------------------ccccccccceeeccccHHHHHHH----HH
Q 016053 176 VLPNVLWWIHEMR--GHYFK---------LDYV------------------KHLPLVAGAMIDSHVTAEYWKNR----TR 222 (396)
Q Consensus 176 ~~~~vv~~~h~~~--~~~~~---------~~~~------------------~~~~~~~~~~~~s~~~~~~~~~~----~~ 222 (396)
...++++++|+.. +.+.. ..+. ..+..++.++++|...++.+... +.
T Consensus 638 ~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~ 717 (977)
T PLN02939 638 NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQ 717 (977)
T ss_pred CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchH
Confidence 2357999999873 21100 0000 01125677888888877665541 11
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCC---CCEEEEEEecccCCCCHHHH
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRN---EDLLFAIINSVSRGKGQDLF 288 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~---~~~~il~vG~l~~~Kg~~~l 288 (396)
..++....++.+|+||||.+.|.|..++ ..+...+..+++++|+++ +.++|+++||+.++||++.+
T Consensus 718 ~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlL 797 (977)
T PLN02939 718 DTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLI 797 (977)
T ss_pred HHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHH
Confidence 1234567889999999999998875431 122344678999999974 46899999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC--HHHHHHHcCEEEecCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT--VAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~--~~~~~~~aDv~v~pS~~ 366 (396)
++|+..+.+ ++++|+|+|+|+.. .+.+.+++++.++++.++|.|+|..++ ...+|+.||+||+||.
T Consensus 798 leA~~~Ll~---------~dvqLVIvGdGp~~--~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr- 865 (977)
T PLN02939 798 RHAIYKTAE---------LGGQFVLLGSSPVP--HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSM- 865 (977)
T ss_pred HHHHHHHhh---------cCCEEEEEeCCCcH--HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCC-
Confidence 999988754 57899999998622 356788999999999899999998754 4689999999999999
Q ss_pred CCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+|+||++++|||+||+|+|++++||..
T Consensus 866 -~EPfGLvqLEAMAyGtPPVVs~vGGL~ 892 (977)
T PLN02939 866 -FEPCGLTQMIAMRYGSVPIVRKTGGLN 892 (977)
T ss_pred -ccCCcHHHHHHHHCCCCEEEecCCCCc
Confidence 999999999999999999999999974
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=268.51 Aligned_cols=284 Identities=16% Similarity=0.104 Sum_probs=195.2
Q ss_pred ccccEEEEEeccC---CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceE-----EEEc---C
Q 016053 72 MKSKLVLLVSHEL---SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-----VISA---K 140 (396)
Q Consensus 72 m~~~kIl~v~~~~---~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~ 140 (396)
+++|||+++.... ..||++.++.+++++|.++||+|++++................ ....... .... .
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~ 134 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIG-SWSFPCPFYQKVPLSLALSP 134 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccccCceeec-cCCcCCccCCCceeeccCCH
Confidence 6778999987532 3499999999999999999999999995433211000000000 0000000 0001 1
Q ss_pred chhhhhhccCCcEEEEcCchhhHHHH--HHHhcCCCccccceeeeeeecccccCch---------h---hhccccccccc
Q 016053 141 GQETINTALKADLIVLNTAVAGKWLD--AVLKEDVPRVLPNVLWWIHEMRGHYFKL---------D---YVKHLPLVAGA 206 (396)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~~~~--~~~~~~~~~~~~~vv~~~h~~~~~~~~~---------~---~~~~~~~~~~~ 206 (396)
....+.+..+||+||+|++....+.. .+...++ |++.+.|+....+... . .....+..+.+
T Consensus 135 ~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~i-----p~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 135 RIISEVARFKPDLIHASSPGIMVFGALFYAKLLCV-----PLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLT 209 (465)
T ss_pred HHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCC-----CEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEE
Confidence 12234456899999999864333222 2233443 4666777642211110 0 11223466777
Q ss_pred eeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcC-CCCCCEEEEEEecccCCCCH
Q 016053 207 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRNEDLLFAIINSVSRGKGQ 285 (396)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g-~~~~~~~il~vG~l~~~Kg~ 285 (396)
++.|....+.+.+ ....+.+++.+||||+|.+.|.+... ....++++. .++++++|+|+|++.+.||+
T Consensus 210 i~~S~~~~~~l~~----~~~~~~~kv~vi~nGvd~~~f~p~~~-------~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~ 278 (465)
T PLN02871 210 LVTSPALGKELEA----AGVTAANRIRVWNKGVDSESFHPRFR-------SEEMRARLSGGEPEKPLIVYVGRLGAEKNL 278 (465)
T ss_pred EECCHHHHHHHHH----cCCCCcCeEEEeCCccCccccCCccc-------cHHHHHHhcCCCCCCeEEEEeCCCchhhhH
Confidence 7777776665543 22234678999999999998865321 123455543 34577899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 286 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 286 ~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
+.++++++++ ++++|+|+|+|+ +.+++++++++ .+|+|+|++ +++..+|++||++|+|
T Consensus 279 ~~li~a~~~~-----------~~~~l~ivG~G~-----~~~~l~~~~~~----~~V~f~G~v~~~ev~~~~~~aDv~V~p 338 (465)
T PLN02871 279 DFLKRVMERL-----------PGARLAFVGDGP-----YREELEKMFAG----TPTVFTGMLQGDELSQAYASGDVFVMP 338 (465)
T ss_pred HHHHHHHHhC-----------CCcEEEEEeCCh-----HHHHHHHHhcc----CCeEEeccCCHHHHHHHHHHCCEEEEC
Confidence 9999998764 689999999986 77888888764 369999997 7899999999999999
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|. .|+||++++||||||+|||+|+.||..
T Consensus 339 S~--~E~~g~~vlEAmA~G~PVI~s~~gg~~ 367 (465)
T PLN02871 339 SE--SETLGFVVLEAMASGVPVVAARAGGIP 367 (465)
T ss_pred Cc--ccccCcHHHHHHHcCCCEEEcCCCCcH
Confidence 99 999999999999999999999999865
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=265.76 Aligned_cols=288 Identities=13% Similarity=0.044 Sum_probs=204.9
Q ss_pred cEEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh----hhhhhhhhcceEEEEcCch------
Q 016053 75 KLVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY----SLEHKMWDRGVQVISAKGQ------ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~------ 142 (396)
|||++++....+ ||++.++.+++++|.++||+|+|+|.....+...... .........|++++..+..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 589999976433 8999999999999999999999999543211110000 0001112345666443210
Q ss_pred --hh--------------hhh--ccCCcEEEEcCchhh--HH-HHHHHhcCCCccccceeeeeeecccc------cCchh
Q 016053 143 --ET--------------INT--ALKADLIVLNTAVAG--KW-LDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLD 195 (396)
Q Consensus 143 --~~--------------~~~--~~~~DiV~~~~~~~~--~~-~~~~~~~~~~~~~~~vv~~~h~~~~~------~~~~~ 195 (396)
+. +.. ..+||+||+|.+... .. ...++..+. ++++++|+.... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~-----~~v~~~~d~~~~~~~~~~~~~~~ 155 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGA-----RTWLHIQDYEVDAAFGLGLLKGG 155 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCC-----CEEEEeccCCHHHHHHhCCccCc
Confidence 00 111 268999999986432 11 122233343 466677764210 01110
Q ss_pred ---------hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCC
Q 016053 196 ---------YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV 266 (396)
Q Consensus 196 ---------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~ 266 (396)
....++.++.+++.|....+.+. ..+.+..++.+||||+|.+.|.+... ..+..+++++++
T Consensus 156 ~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~-----~~~~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~ 225 (412)
T PRK10307 156 KVARLATAFERSLLRRFDNVSTISRSMMNKAR-----EKGVAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGL 225 (412)
T ss_pred HHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH-----HcCCCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCC
Confidence 11234567888888887777654 34667788999999999988765321 113457888999
Q ss_pred CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 267 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 267 ~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++++++|+|+|++.+.||++.+++|++.+. +.++++|+|+|+|+ .++++++++++++++ +|+|+|+
T Consensus 226 ~~~~~~i~~~G~l~~~kg~~~li~a~~~l~--------~~~~~~l~ivG~g~-----~~~~l~~~~~~~~l~-~v~f~G~ 291 (412)
T PRK10307 226 PDGKKIVLYSGNIGEKQGLELVIDAARRLR--------DRPDLIFVICGQGG-----GKARLEKMAQCRGLP-NVHFLPL 291 (412)
T ss_pred CCCCEEEEEcCccccccCHHHHHHHHHHhc--------cCCCeEEEEECCCh-----hHHHHHHHHHHcCCC-ceEEeCC
Confidence 888899999999999999999999998763 23789999999986 778899999999986 7999998
Q ss_pred c--CCHHHHHHHcCEEEecCCCCCCC----ccHHHHHHHhcCCCEEEcCCCCC
Q 016053 347 T--LTVAPYLAAIDVLVQNSQAWGEC----FGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 347 ~--~~~~~~~~~aDv~v~pS~~~~E~----fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+ +++.++|++||++|+||. .|+ +|.+++||||||+|||+|+.||.
T Consensus 292 ~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~ 342 (412)
T PRK10307 292 QPYDRLPALLKMADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGT 342 (412)
T ss_pred CCHHHHHHHHHhcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCc
Confidence 6 689999999999999999 888 57789999999999999998874
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=261.04 Aligned_cols=277 Identities=18% Similarity=0.158 Sum_probs=199.1
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc----------------------hh
Q 016053 86 LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----------------------QE 143 (396)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 143 (396)
.||+++++.+|+++|.++||+|+|++......... ......++.+..... .+
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPP------VVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLR 92 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC------ccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999543211100 001123444443210 00
Q ss_pred hhhh--ccCCcEEEEcCchhhHHHHHHHh-cCCCccccceeeeeeecccc---c------Cchh---h--hccccccccc
Q 016053 144 TINT--ALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGH---Y------FKLD---Y--VKHLPLVAGA 206 (396)
Q Consensus 144 ~~~~--~~~~DiV~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~h~~~~~---~------~~~~---~--~~~~~~~~~~ 206 (396)
.+.+ ..++|+||+|....+.....+.+ .+ .|++++.|+.... + .... + ...+..++.+
T Consensus 93 ~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~-----~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~v 167 (405)
T TIGR03449 93 AEARHEPGYYDLIHSHYWLSGQVGWLLRDRWG-----VPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRL 167 (405)
T ss_pred HHhhccCCCCCeEEechHHHHHHHHHHHHhcC-----CCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeE
Confidence 1111 24799999998554433222222 23 3577888875210 0 0000 0 1234567777
Q ss_pred eeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 207 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
++.|....+.+.+ .++.+.+++.+||||+|.+.|.+.. +...++++++++++++|+++|++.+.||++
T Consensus 168 i~~s~~~~~~~~~----~~~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~ 235 (405)
T TIGR03449 168 IANTDEEARDLVR----HYDADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPD 235 (405)
T ss_pred EECCHHHHHHHHH----HcCCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHH
Confidence 7777765554433 5677778899999999998875432 344677889888889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCC--EEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEe
Q 016053 287 LFLHSFYESLELIKEKKLEVPS--VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQ 362 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~--~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~ 362 (396)
.+++|++++.+. .++ ++|+|+|++.....++.++++++++++++.++|+|+|++ +++.++|+.||++++
T Consensus 236 ~li~a~~~l~~~-------~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ 308 (405)
T TIGR03449 236 VLLRAVAELLDR-------DPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAV 308 (405)
T ss_pred HHHHHHHHHHhh-------CCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEE
Confidence 999999998653 244 999999964321113678899999999999999999986 789999999999999
Q ss_pred cCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 363 NSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 363 pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||. .|+||++++|||++|+|||+++.||..
T Consensus 309 ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~ 338 (405)
T TIGR03449 309 PSY--NESFGLVAMEAQACGTPVVAARVGGLP 338 (405)
T ss_pred CCC--CCCcChHHHHHHHcCCCEEEecCCCcH
Confidence 999 999999999999999999999999864
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=257.34 Aligned_cols=288 Identities=17% Similarity=0.145 Sum_probs=195.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------hh--
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------ET-- 144 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-- 144 (396)
||+++++....||.++++.+++++|.+.||+|++++.................. .|..+ ..... ..
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~g~~~-~~~~~~~~~~~~~~~~~~ 77 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNAL--QGADI-ELSEEEKEIYLEWNEENA 77 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhh--cCCCC-CCCHHHHHHHHHHHHHHh
Confidence 589999888889999999999999999999999998543321101000011101 12222 11110 00
Q ss_pred --hhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhh---hccccccccceeeccccHHHHHH
Q 016053 145 --INTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDY---VKHLPLVAGAMIDSHVTAEYWKN 219 (396)
Q Consensus 145 --~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~ 219 (396)
.....+||+||+|++....+ ..+.+.. ..+++++.|..........+ .+.+..++..++.+ .++ .
T Consensus 78 ~~~~~~~~~Dvv~~h~~~~~~~-~~~~~~~----~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~---~~~-~- 147 (372)
T cd03792 78 ERPLLDLDADVVVIHDPQPLAL-PLFKKKR----GRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHL---PEY-V- 147 (372)
T ss_pred ccccccCCCCEEEECCCCchhH-HHhhhcC----CCeEEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecH---HHh-c-
Confidence 12246899999998764332 2222221 24578888875432221111 22334555555444 222 1
Q ss_pred HHHhhhcccCCCEEEEecCCccch-hhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHH
Q 016053 220 RTRERLRIKMPDTYVVHLGNSKEL-MEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLEL 298 (396)
Q Consensus 220 ~~~~~~g~~~~k~~vI~ngid~~~-~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~ 298 (396)
..++...+. +||||+|... +....+ ...+..+++++|+++++++|+++||+.+.||++.+++|++.+.+
T Consensus 148 ----~~~~~~~~~-vipngvd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~- 217 (372)
T cd03792 148 ----PPQVPPRKV-IIPPSIDPLSGKNRELS----PADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE- 217 (372)
T ss_pred ----CCCCCCceE-EeCCCCCCCccccCCCC----HHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh-
Confidence 124455555 9999999753 111111 12345678889998899999999999999999999999998865
Q ss_pred HHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc----CCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 299 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT----LTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 299 ~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~----~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
+.++++|+++|+|+..++...+.++++.++.++.++|.|+|.. +++.++|++||++++||. .|+||++
T Consensus 218 ------~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~ 289 (372)
T cd03792 218 ------RVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLT 289 (372)
T ss_pred ------hCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHH
Confidence 2378999999998754433444556666667788899999875 689999999999999999 9999999
Q ss_pred HHHHHhcCCCEEEcCCCCCC
Q 016053 375 TIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 375 ~lEAma~G~PVI~t~~gG~~ 394 (396)
++||||||+|||+|+.+|..
T Consensus 290 ~lEA~a~G~Pvv~s~~~~~~ 309 (372)
T cd03792 290 VTEALWKGKPVIAGPVGGIP 309 (372)
T ss_pred HHHHHHcCCCEEEcCCCCch
Confidence 99999999999999999864
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=261.55 Aligned_cols=304 Identities=19% Similarity=0.154 Sum_probs=207.4
Q ss_pred cEEEEEeccCC----CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhh----------hhh--------hhhhc
Q 016053 75 KLVLLVSHELS----LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS----------LEH--------KMWDR 132 (396)
Q Consensus 75 ~kIl~v~~~~~----~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~----------~~~--------~~~~~ 132 (396)
|||++++.+.. .||...++..|.++|+++||+|.|+++..+......... ... .....
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 58999998733 388889999999999999999999996544211110000 000 00112
Q ss_pred ceEEEEcCch-------------------h----------hhh-hccCCcEEEEcCchhhHHHHHHHhcCCCccccceee
Q 016053 133 GVQVISAKGQ-------------------E----------TIN-TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLW 182 (396)
Q Consensus 133 ~~~~~~~~~~-------------------~----------~~~-~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~ 182 (396)
|++++.+... + .+. ...+||+||+|+..++.....+....-.. ..++++
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~-~~~~v~ 159 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPN-PIKTVF 159 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCC-CCCEEE
Confidence 3333221100 0 000 12589999999976665444333321100 256899
Q ss_pred eeeeccc-ccCchh-------------------------hhccccccccceeeccccHHHHHHHH-----HhhhcccCCC
Q 016053 183 WIHEMRG-HYFKLD-------------------------YVKHLPLVAGAMIDSHVTAEYWKNRT-----RERLRIKMPD 231 (396)
Q Consensus 183 ~~h~~~~-~~~~~~-------------------------~~~~~~~~~~~~~~s~~~~~~~~~~~-----~~~~g~~~~k 231 (396)
++|+... ..+... ....+..++.++++|...++.+.... ...+.....+
T Consensus 160 TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~k 239 (473)
T TIGR02095 160 TIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGK 239 (473)
T ss_pred EcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCC
Confidence 9998631 111110 01123567788888887766654310 0001123578
Q ss_pred EEEEecCCccchhhhhhhhH-----------HHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHHHHHHHH
Q 016053 232 TYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLEL 298 (396)
Q Consensus 232 ~~vI~ngid~~~~~~~~~~~-----------~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~~~l~~~ 298 (396)
+.+|+||+|.+.|.|..++. .+...+..+++++|++. +.++|+++||+.++||++.+++|+.++.+
T Consensus 240 i~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~- 318 (473)
T TIGR02095 240 LRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE- 318 (473)
T ss_pred eEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH-
Confidence 99999999999887643211 12334677899999975 78999999999999999999999998864
Q ss_pred HHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHH
Q 016053 299 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI 376 (396)
Q Consensus 299 ~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~l 376 (396)
.+++|+|+|+|. +.+.+++++++++++ +++.+.+.. +++..+|++||++++||. .|+||++++
T Consensus 319 --------~~~~lvi~G~g~---~~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~l 383 (473)
T TIGR02095 319 --------LGGQLVVLGTGD---PELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQL 383 (473)
T ss_pred --------cCcEEEEECCCC---HHHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHH
Confidence 469999999985 236778888887765 568777654 457889999999999999 999999999
Q ss_pred HHHhcCCCEEEcCCCCCCC
Q 016053 377 EAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 377 EAma~G~PVI~t~~gG~~~ 395 (396)
|||+||+|||++++||...
T Consensus 384 EAma~G~pvI~s~~gg~~e 402 (473)
T TIGR02095 384 YAMRYGTVPIVRRTGGLAD 402 (473)
T ss_pred HHHHCCCCeEEccCCCccc
Confidence 9999999999999999753
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=257.37 Aligned_cols=286 Identities=15% Similarity=0.122 Sum_probs=201.4
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCch--hhhh--hhhhhhhhc-----------c------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEED--EVIY--SLEHKMWDR-----------G------ 133 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~--~~~~~~~~~-----------~------ 133 (396)
|||+++.+.++. -.|+++.+-+.+|.++|++|.+++..++.+.. +... .+....... .
T Consensus 1 m~ia~~~~~~P~-~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (406)
T PRK15427 1 MKVGFFLLKFPL-SSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQT 79 (406)
T ss_pred CeEEEEeccCCc-cchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhH
Confidence 489999887764 44899999999999999999999954432210 0000 000000000 0
Q ss_pred eE-EE------EcCc------h---------hhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc
Q 016053 134 VQ-VI------SAKG------Q---------ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY 191 (396)
Q Consensus 134 ~~-~~------~~~~------~---------~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~ 191 (396)
.. .. ..+. . ....+..++|+||+|....+.....+...+. ...+++++.|...-..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~--~~~~~~~t~Hg~d~~~ 157 (406)
T PRK15427 80 LRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGV--LRGKIATIFHGIDISS 157 (406)
T ss_pred hhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCC--CCCCeEEEEccccccc
Confidence 00 00 0000 0 0111346899999998765544444333221 1134677888753111
Q ss_pred ------CchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcC
Q 016053 192 ------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG 265 (396)
Q Consensus 192 ------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g 265 (396)
+...+...+...+.+++.|....+.+. .+|.+.+++.+||||+|.+.|.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~-----~~g~~~~ki~vi~nGvd~~~f~~~~~~--------------- 217 (406)
T PRK15427 158 REVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQ-----KMGCPPEKIAVSRMGVDMTRFSPRPVK--------------- 217 (406)
T ss_pred chhhhhhhHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCHHHEEEcCCCCCHHHcCCCccc---------------
Confidence 112234455678888888877666554 347777899999999999888543210
Q ss_pred CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec
Q 016053 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 266 ~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
...+.+.|+++||+.+.||++.+++|++.+.+ ++++++|+|+|+|+ +++++++++++++++++|+|+|
T Consensus 218 ~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~-------~~~~~~l~ivG~G~-----~~~~l~~~~~~~~l~~~V~~~G 285 (406)
T PRK15427 218 APATPLEIISVARLTEKKGLHVAIEACRQLKE-------QGVAFRYRILGIGP-----WERRLRTLIEQYQLEDVVEMPG 285 (406)
T ss_pred cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHh-------hCCCEEEEEEECch-----hHHHHHHHHHHcCCCCeEEEeC
Confidence 12456789999999999999999999998865 34799999999986 7889999999999999999999
Q ss_pred Cc--CCHHHHHHHcCEEEecCCC----CCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 346 KT--LTVAPYLAAIDVLVQNSQA----WGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 346 ~~--~~~~~~~~~aDv~v~pS~~----~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
++ +++.++|+.||++|+||.. ..||||++++||||||+|||+|+.||..+
T Consensus 286 ~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E 341 (406)
T PRK15427 286 FKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPE 341 (406)
T ss_pred CCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchh
Confidence 86 6899999999999999971 02999999999999999999999999754
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=254.16 Aligned_cols=288 Identities=18% Similarity=0.191 Sum_probs=195.1
Q ss_pred EEEEEeccCCCCChHHHHH----HHHHHHHhCCC--------EEEEEecc-CCCCchhhhhhhhhhhhhcceEEEEcCc-
Q 016053 76 LVLLVSHELSLSGGPLLLM----ELAFLLRGVGT--------KVNWITIQ-KPSEEDEVIYSLEHKMWDRGVQVISAKG- 141 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~----~l~~~L~~~G~--------~V~vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (396)
.+++++..+..||+|+.+. .++++.++.|- .|.+++.. .+.. ..+ .+...+.+.++.+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~ 239 (578)
T PRK15490 163 RLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPEL--RQD-FFLKEVLEEQVEVLEIAKI 239 (578)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCccc--Ccc-hhHHHHHhcCCceEEeecc
Confidence 6999999999999999888 55555555554 67777722 2211 011 122223333443322110
Q ss_pred --------------------------------hhhhhhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeecc
Q 016053 142 --------------------------------QETINTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMR 188 (396)
Q Consensus 142 --------------------------------~~~~~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~ 188 (396)
...+.++.+||+||+|...+..+.. .+...++|. ++.+.|.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpv----iv~~~h~~~ 315 (578)
T PRK15490 240 TGNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPR----IQLGLRGLP 315 (578)
T ss_pred chhhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCE----EEEeecccC
Confidence 0123345899999999865543322 223345442 233444421
Q ss_pred cccCch----hhhc-----c-ccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHH
Q 016053 189 GHYFKL----DYVK-----H-LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLRE 258 (396)
Q Consensus 189 ~~~~~~----~~~~-----~-~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~ 258 (396)
...... .+.. . ....+ .++++..+++.+ .+.++++++|+.+||||+|.+.|.+.... +.
T Consensus 316 ~~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l----~~~lgip~~KI~VIyNGVD~~rf~p~~~~------~~ 384 (578)
T PRK15490 316 PVVRKRLFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHY----ADWLKLEAKHFQVVYNGVLPPSTEPSSEV------PH 384 (578)
T ss_pred CcchhhHHHHHHHHhhhhceeEecch-hhhccHHHHHHH----HHHhCCCHHHEEEEeCCcchhhcCccchh------hH
Confidence 111111 1100 0 11111 444454444443 33568889999999999999887654211 11
Q ss_pred HHHH--HcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcC
Q 016053 259 HVRE--SLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 259 ~~r~--~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
..++ ..+++++.++|+++||+.+.||++.+++++.++.+ +.++++|+|+|+|+ +++++++++++++
T Consensus 385 ~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk-------~~pdirLvIVGdG~-----~~eeLk~la~elg 452 (578)
T PRK15490 385 KIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQ-------HHPATRFVLVGDGD-----LRAEAQKRAEQLG 452 (578)
T ss_pred HHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHh-------HCCCeEEEEEeCch-----hHHHHHHHHHHcC
Confidence 1222 23445677899999999999999999999998765 23899999999986 7789999999999
Q ss_pred CCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 337 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 337 l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+.++|+|+|+.+|+.++|+++|++|+||. +|+||++++||||||+|||+|+.||..+
T Consensus 453 L~d~V~FlG~~~Dv~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~E 509 (578)
T PRK15490 453 ILERILFVGASRDVGYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAE 509 (578)
T ss_pred CCCcEEECCChhhHHHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHH
Confidence 99999999999999999999999999999 9999999999999999999999999753
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=256.57 Aligned_cols=290 Identities=19% Similarity=0.195 Sum_probs=202.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE--Ec---Cc-hh-----
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SA---KG-QE----- 143 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~-~~----- 143 (396)
||||++.+....||+++++.+|+++|.++||+|+++|...+... ........++.+. .. .. ..
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSH------CFEETKDGTLPVRVRGDWLPRSIFGRFHIL 74 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchh------cchhccCCeeEEEEEeEEEcchhhHhHHHH
Confidence 58999999988899999999999999999999999995422100 0011111112221 10 00 00
Q ss_pred -------------hhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccC------chhh--------
Q 016053 144 -------------TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF------KLDY-------- 196 (396)
Q Consensus 144 -------------~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~------~~~~-------- 196 (396)
.+....++|+||+|+......+... ... .+++++.|....... ...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~-~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 148 (392)
T cd03805 75 CAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPLLKL-FSP-----SKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLE 148 (392)
T ss_pred HHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHHHHH-hcC-----CcEEEEEecChHHhcCCCcHHHHHHHHHHHHHH
Confidence 0234479999999875443332211 111 457788884321110 0001
Q ss_pred hccccccccceeeccccHHHHHHHHHhhhcc-cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEE
Q 016053 197 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRI-KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (396)
Q Consensus 197 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~-~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~ 275 (396)
...++.++.+++.|....+.+.+. ++. ...++.+||||+|.+.|.+.... ..++.....++.++|++
T Consensus 149 ~~~~~~ad~ii~~s~~~~~~~~~~----~~~~~~~~~~vi~n~vd~~~~~~~~~~--------~~~~~~~~~~~~~~i~~ 216 (392)
T cd03805 149 EFTTGMADKIVVNSNFTASVFKKT----FPSLAKNPREVVYPCVDTDSFESTSED--------PDPGLLIPKSGKKTFLS 216 (392)
T ss_pred HHHhhCceEEEEcChhHHHHHHHH----hcccccCCcceeCCCcCHHHcCccccc--------ccccccccCCCceEEEE
Confidence 112456788888888877766543 332 23335699999999887643211 12233445578899999
Q ss_pred EecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc---cchHHHHHHHHHHh-cCCCCcEEEecCc--CC
Q 016053 276 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA---QTKFESELRNYVMQ-KKIQDRVHFVNKT--LT 349 (396)
Q Consensus 276 vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~---~~~~~~~l~~~~~~-~~l~~~V~~~g~~--~~ 349 (396)
+|++.+.||++.+++|++++.+..++ .++++|+++|+++.. +..+.+++++.+++ +++.++|+|+|++ ++
T Consensus 217 ~grl~~~Kg~~~ll~a~~~l~~~~~~----~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~ 292 (392)
T cd03805 217 INRFERKKNIALAIEAFAILKDKLAE----FKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQ 292 (392)
T ss_pred EeeecccCChHHHHHHHHHHHhhccc----ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHH
Confidence 99999999999999999998753210 168999999988632 22356789999999 9999999999997 56
Q ss_pred HHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 350 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 350 ~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+..+|++||++++||. .|+||++++||||||+|||+|+.||..
T Consensus 293 ~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~ 335 (392)
T cd03805 293 KELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPL 335 (392)
T ss_pred HHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcH
Confidence 7899999999999999 999999999999999999999999975
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=253.91 Aligned_cols=277 Identities=11% Similarity=0.112 Sum_probs=192.4
Q ss_pred cEEEEEeccCC-CCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE--E----cCchhhh
Q 016053 75 KLVLLVSHELS-LSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--S----AKGQETI 145 (396)
Q Consensus 75 ~kIl~v~~~~~-~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~ 145 (396)
|||+++++... .||+|+++.+++++|.++ |++|.+++.......... ...........+.+. . ......+
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWL-KEIKYAQSFSNIKLSFLRRAKHVYNFSKW 79 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHH-HhcchhcccccchhhhhcccHHHHHHHHH
Confidence 58999988654 599999999999999999 899999986543211100 000000000011111 0 1112344
Q ss_pred hhccCCcEEEEcCchhhHHHHHHHh-cCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhh
Q 016053 146 NTALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRER 224 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 224 (396)
.+..+||+||+|.+....+...+.+ .+.| .+++.+.|......... ....+...+.+++.|..+.+.+. .
T Consensus 80 l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~~~~~~~-~~~~~~~~d~~i~~S~~~~~~~~-----~ 150 (359)
T PRK09922 80 LKETQPDIVICIDVISCLYANKARKKSGKQ---FKIFSWPHFSLDHKKHA-ECKKITCADYHLAISSGIKEQMM-----A 150 (359)
T ss_pred HHhcCCCEEEEcCHHHHHHHHHHHHHhCCC---CeEEEEecCcccccchh-hhhhhhcCCEEEEcCHHHHHHHH-----H
Confidence 5668999999998765544333332 2333 23455556432111111 11223677888888877766654 3
Q ss_pred hcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc--CCCCHHHHHHHHHHHHHHHHhh
Q 016053 225 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS--RGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 225 ~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~--~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
++++.+++.+||||+|.+.+..... -..+++.|+++||+. +.||++.+++++.++.
T Consensus 151 ~~~~~~ki~vi~N~id~~~~~~~~~----------------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~------ 208 (359)
T PRK09922 151 RGISAQRISVIYNPVEIKTIIIPPP----------------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT------ 208 (359)
T ss_pred cCCCHHHEEEEcCCCCHHHccCCCc----------------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC------
Confidence 4677788999999999665421100 013568899999996 4699999999998763
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC----CHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL----TVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~----~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
++++|+++|+|+ ..+++++++++++++++|+|+|+++ ++.++|+.+|++|+||. .|+||++++||
T Consensus 209 ----~~~~l~ivG~g~-----~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEA 277 (359)
T PRK09922 209 ----GEWQLHIIGDGS-----DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEA 277 (359)
T ss_pred ----CCeEEEEEeCCc-----cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHH
Confidence 479999999986 6788999999999999999999864 46777888999999999 99999999999
Q ss_pred HhcCCCEEEcC-CCCCC
Q 016053 379 MAFQLPVLVLS-ELHPS 394 (396)
Q Consensus 379 ma~G~PVI~t~-~gG~~ 394 (396)
||||+|||+|+ .||+.
T Consensus 278 ma~G~Pvv~s~~~~g~~ 294 (359)
T PRK09922 278 MSYGIPCISSDCMSGPR 294 (359)
T ss_pred HHcCCCEEEeCCCCChH
Confidence 99999999999 88865
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-31 Score=258.37 Aligned_cols=304 Identities=20% Similarity=0.157 Sum_probs=208.2
Q ss_pred EEEEEeccCC----CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh------------------hhhhcc
Q 016053 76 LVLLVSHELS----LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH------------------KMWDRG 133 (396)
Q Consensus 76 kIl~v~~~~~----~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~------------------~~~~~~ 133 (396)
||++++++.. .||...++..|+++|++.||+|.|+++..+............ .....|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 5899998733 399999999999999999999999996543211100000000 011234
Q ss_pred eEEEEcCchh------------------------------hhhh--ccCCcEEEEcCchhhHHHHHHHhcCC--Cccccc
Q 016053 134 VQVISAKGQE------------------------------TINT--ALKADLIVLNTAVAGKWLDAVLKEDV--PRVLPN 179 (396)
Q Consensus 134 ~~~~~~~~~~------------------------------~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~--~~~~~~ 179 (396)
++++.+.... .+.. ..+||+||+|+..++.....+..... .....+
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~ 160 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK 160 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence 4443322110 0111 26899999999766554443333210 011367
Q ss_pred eeeeeeeccccc-Cchh--------------------------hhccccccccceeeccccHHHHHHH-----HHhhhcc
Q 016053 180 VLWWIHEMRGHY-FKLD--------------------------YVKHLPLVAGAMIDSHVTAEYWKNR-----TRERLRI 227 (396)
Q Consensus 180 vv~~~h~~~~~~-~~~~--------------------------~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~g~ 227 (396)
+++++|+..... +... ....+..++.++++|...++.+.+. +...+..
T Consensus 161 ~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~ 240 (476)
T cd03791 161 TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRA 240 (476)
T ss_pred EEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHh
Confidence 999999863110 1100 0112346788888888777665431 1111223
Q ss_pred cCCCEEEEecCCccchhhhhhhhH-----------HHHHhHHHHHHHcCCC--CCCEEEEEEecccCCCCHHHHHHHHHH
Q 016053 228 KMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGVR--NEDLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 228 ~~~k~~vI~ngid~~~~~~~~~~~-----------~~~~~~~~~r~~~g~~--~~~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
...++.+|+||+|.+.|.+..++. .+...+..+++++|++ ++.++|+++||+.++||++.+++|+.+
T Consensus 241 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 320 (476)
T cd03791 241 RAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPE 320 (476)
T ss_pred ccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHH
Confidence 457899999999999887653321 1334567789999985 788999999999999999999999998
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec-Cc-CCHHHHHHHcCEEEecCCCCCCCcc
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-KT-LTVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g-~~-~~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
+.+ .+++|+++|+|. ..+.+.++++++++ .+++.+.+ .. +++..+|+.||++++||. .|+||
T Consensus 321 l~~---------~~~~lvi~G~g~---~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~g 384 (476)
T cd03791 321 LLE---------LGGQLVILGSGD---PEYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCG 384 (476)
T ss_pred HHH---------cCcEEEEEecCC---HHHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCc
Confidence 865 469999999984 23567777777765 46787665 44 456789999999999999 99999
Q ss_pred HHHHHHHhcCCCEEEcCCCCCCC
Q 016053 373 RITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 373 ~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
++++|||+||+|||++++||...
T Consensus 385 l~~lEAma~G~pvI~~~~gg~~e 407 (476)
T cd03791 385 LTQMYAMRYGTVPIVRATGGLAD 407 (476)
T ss_pred HHHHHHhhCCCCCEECcCCCccc
Confidence 99999999999999999999764
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=255.10 Aligned_cols=304 Identities=16% Similarity=0.134 Sum_probs=209.3
Q ss_pred cEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchh---h-----hhhh----hhh----------
Q 016053 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE---V-----IYSL----EHK---------- 128 (396)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~-----~~~~----~~~---------- 128 (396)
|||+|++++..+ ||-.-++..|.++|+++||+|.|+++.-..-... . ...+ ...
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTA 85 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEec
Confidence 699999988443 8888999999999999999999999744321110 0 0000 000
Q ss_pred hhhcceEEEEcCch---------------------------------hhhhh-ccCCcEEEEcCchhhHHHHHHHhcC--
Q 016053 129 MWDRGVQVISAKGQ---------------------------------ETINT-ALKADLIVLNTAVAGKWLDAVLKED-- 172 (396)
Q Consensus 129 ~~~~~~~~~~~~~~---------------------------------~~~~~-~~~~DiV~~~~~~~~~~~~~~~~~~-- 172 (396)
....+++++-+... ..+.. ..+||+||+|+..++.....+....
T Consensus 86 ~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~ 165 (489)
T PRK14098 86 LPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYAD 165 (489)
T ss_pred ccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhh
Confidence 00012333211100 01111 1489999999966554433332211
Q ss_pred CC-ccccceeeeeeeccccc-Cch---------hh--------------hccccccccceeeccccHHHHHHHHHhhhcc
Q 016053 173 VP-RVLPNVLWWIHEMRGHY-FKL---------DY--------------VKHLPLVAGAMIDSHVTAEYWKNRTRERLRI 227 (396)
Q Consensus 173 ~~-~~~~~vv~~~h~~~~~~-~~~---------~~--------------~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~ 227 (396)
.+ ....++++++|+..... +.. .+ +..+..++.++++|...++.+.......+|+
T Consensus 166 ~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl 245 (489)
T PRK14098 166 HEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGL 245 (489)
T ss_pred ccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcCh
Confidence 00 11357999999863110 100 00 0122567888888888777654310001343
Q ss_pred c------CCCEEEEecCCccchhhhhhhhH-----------HHHHhHHHHHHHcCCC--CCCEEEEEEecccCCCCHHHH
Q 016053 228 K------MPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGVR--NEDLLFAIINSVSRGKGQDLF 288 (396)
Q Consensus 228 ~------~~k~~vI~ngid~~~~~~~~~~~-----------~~~~~~~~~r~~~g~~--~~~~~il~vG~l~~~Kg~~~l 288 (396)
+ ..++.+|+||||.+.|.|..++. .+...+..+++++|++ ++.++|+++||+.++||++.+
T Consensus 246 ~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~l 325 (489)
T PRK14098 246 DKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELL 325 (489)
T ss_pred HHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHH
Confidence 3 67899999999999887654321 1234467889999986 457899999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~ 366 (396)
++|+.++.+ .+++|+|+|+|+ ..+++.+++++++++ ++|.|+|.. +++..+|++||++++||.
T Consensus 326 i~a~~~l~~---------~~~~lvivG~G~---~~~~~~l~~l~~~~~--~~V~~~g~~~~~~~~~~~a~aDi~l~PS~- 390 (489)
T PRK14098 326 AESLEKLVE---------LDIQLVICGSGD---KEYEKRFQDFAEEHP--EQVSVQTEFTDAFFHLAIAGLDMLLMPGK- 390 (489)
T ss_pred HHHHHHHHh---------cCcEEEEEeCCC---HHHHHHHHHHHHHCC--CCEEEEEecCHHHHHHHHHhCCEEEeCCC-
Confidence 999998864 589999999985 235688999988774 789999976 457899999999999999
Q ss_pred CCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.|+||++.+|||+||+|+|++++||..
T Consensus 391 -~E~~Gl~~lEAma~G~ppVv~~~GGl~ 417 (489)
T PRK14098 391 -IESCGMLQMFAMSYGTIPVAYAGGGIV 417 (489)
T ss_pred -CCCchHHHHHHHhCCCCeEEecCCCCc
Confidence 999999999999999999999999974
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-31 Score=255.80 Aligned_cols=292 Identities=13% Similarity=0.108 Sum_probs=186.7
Q ss_pred CCCChHHHHHHHHHHHHhCCC--EEEEEeccCCCCc--hhhhhhhhhhhhhcceEEEEcCch------------------
Q 016053 85 SLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEE--DEVIYSLEHKMWDRGVQVISAKGQ------------------ 142 (396)
Q Consensus 85 ~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------------------ 142 (396)
..||+++++.+|+++|.++|| +|+|+|...+... ........ ....|++++.....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~--~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~ 101 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE--RIAPGARIVRLPFGPRRYLRKELLWPYLDELA 101 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee--EeCCCcEEEEecCCCCCCcChhhhhhhHHHHH
Confidence 349999999999999999997 9999994322100 00000011 11245666443210
Q ss_pred ---hhhhhc--cCCcEEEEcCchhhHHHHHHHh-cCCCccccceeeeeeecccccCc---------hh------------
Q 016053 143 ---ETINTA--LKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYFK---------LD------------ 195 (396)
Q Consensus 143 ---~~~~~~--~~~DiV~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~h~~~~~~~~---------~~------------ 195 (396)
..+.+. .+||+||+|+..++.....+.+ .+ .|++.+.|........ ..
T Consensus 102 ~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~-----~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T TIGR02472 102 DNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLG-----VPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIE 176 (439)
T ss_pred HHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhC-----CCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHH
Confidence 011121 3699999998654443333222 33 3578888864211000 00
Q ss_pred -hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEE
Q 016053 196 -YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 274 (396)
Q Consensus 196 -~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il 274 (396)
....++..+.+++.+.. .+.+......+++++++.+||||+|.+.|.+..........+ ..++.++..+++++|+
T Consensus 177 ~~~~~~~~ad~ii~~s~~---~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 252 (439)
T TIGR02472 177 AEEETLAHASLVITSTHQ---EIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEID-NLLAPFLKDPEKPPIL 252 (439)
T ss_pred HHHHHHHhCCEEEECCHH---HHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHH-HHHHhhccccCCcEEE
Confidence 01123456666665432 222222212367788999999999999887543211111111 2233455567788999
Q ss_pred EEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCcc------chHHHHHHHHHHhcCCCCcEEEecCc-
Q 016053 275 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ------TKFESELRNYVMQKKIQDRVHFVNKT- 347 (396)
Q Consensus 275 ~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~------~~~~~~l~~~~~~~~l~~~V~~~g~~- 347 (396)
++||+.+.||++.+++|++.+.. +++ .+++. +|+|+|+..+ ..+.+++.+++.++++.++|+|+|++
T Consensus 253 ~vGrl~~~Kg~~~li~A~~~l~~-~~~----~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~ 326 (439)
T TIGR02472 253 AISRPDRRKNIPSLVEAYGRSPK-LQE----MANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHR 326 (439)
T ss_pred EEcCCcccCCHHHHHHHHHhChh-hhh----hccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCC
Confidence 99999999999999999986532 111 13443 3568765321 11234566778889999999999974
Q ss_pred -CCHHHHHHHc----CEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 348 -LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 348 -~~~~~~~~~a----Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+++.++|+.| |++|+||. .|+||++++||||||+|||+|+.||..+
T Consensus 327 ~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~e 377 (439)
T TIGR02472 327 PDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRD 377 (439)
T ss_pred HHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHH
Confidence 7899999987 99999999 9999999999999999999999999753
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=245.55 Aligned_cols=285 Identities=21% Similarity=0.245 Sum_probs=207.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------------h
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------E 143 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 143 (396)
||+++.+....||+++.+.+++++|.+.|++|.+++...... +...+...++.++..... .
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~-------~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 73 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGE-------LGEELEEAGVPVYCLGKRPGRPDPGALLRLY 73 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchh-------hhHHHHhcCCeEEEEecccccccHHHHHHHH
Confidence 689999998889999999999999999999999998543221 222233345555332211 1
Q ss_pred hhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc---Cchhh----hccccccccceeeccccHHH
Q 016053 144 TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY---FKLDY----VKHLPLVAGAMIDSHVTAEY 216 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~---~~~~~----~~~~~~~~~~~~~s~~~~~~ 216 (396)
.+.+..+||+||++......+........ ..++++++.|+..... ..... .......+..++.+....+.
T Consensus 74 ~~~~~~~~div~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 150 (365)
T cd03807 74 KLIRRLRPDVVHTWMYHADLYGGLAARLA---GVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEY 150 (365)
T ss_pred HHHHhhCCCEEEeccccccHHHHHHHHhc---CCCcEEEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHH
Confidence 22345799999998755443333222221 1256888888764331 11111 11223445556666655554
Q ss_pred HHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHH
Q 016053 217 WKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 296 (396)
Q Consensus 217 ~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~ 296 (396)
+. .++++..++.++|||+|...+.+... .....+++++++++.+.|+++|++.+.||++.+++++..+.
T Consensus 151 ~~-----~~~~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 151 HQ-----AIGYPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred HH-----HcCCChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 44 33677788999999999887754321 13456788999889999999999999999999999999886
Q ss_pred HHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHH-hcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHH
Q 016053 297 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM-QKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT 375 (396)
Q Consensus 297 ~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~-~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~ 375 (396)
+. +++++|+++|.+. .....+.... +.++.++|.++|..+++.++|+.||++++||. .|++|+++
T Consensus 220 ~~-------~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~e~~~~~~ 285 (365)
T cd03807 220 KK-------FPNARLLLVGDGP-----DRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSL--SEGFPNVL 285 (365)
T ss_pred Hh-------CCCeEEEEecCCc-----chhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCc--cccCCcHH
Confidence 52 3799999999986 4455555555 78888999999999999999999999999999 89999999
Q ss_pred HHHHhcCCCEEEcCCCCCCC
Q 016053 376 IEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 376 lEAma~G~PVI~t~~gG~~~ 395 (396)
+|||+||+|||+++.||...
T Consensus 286 ~Ea~a~g~PvI~~~~~~~~e 305 (365)
T cd03807 286 LEAMACGLPVVATDVGDNAE 305 (365)
T ss_pred HHHHhcCCCEEEcCCCChHH
Confidence 99999999999999998754
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-32 Score=237.91 Aligned_cols=278 Identities=18% Similarity=0.134 Sum_probs=212.5
Q ss_pred EEEEEecc--CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc--------------
Q 016053 76 LVLLVSHE--LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-------------- 139 (396)
Q Consensus 76 kIl~v~~~--~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 139 (396)
+|+++++. .+.||.|...+.|.+.|-+.||.|.+++..-++- ..-....+|+.++..
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r-------~girylt~glkVyylp~~v~~n~tT~ptv 74 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNR-------VGIRYLTNGLKVYYLPAVVGYNQTTFPTV 74 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCc-------cceeeecCCceEEEEeeeeeecccchhhh
Confidence 68888876 3449999999999999999999999999432210 000111223444332
Q ss_pred ----CchhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch------hhhccccccccceee
Q 016053 140 ----KGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHLPLVAGAMID 209 (396)
Q Consensus 140 ----~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~------~~~~~~~~~~~~~~~ 209 (396)
+..+.+..++++.+||.|++++......+...+ ..+-+++++.|...++.--. .....+...++++|.
T Consensus 75 ~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~har--tMGlktVfTdHSlfGfad~~si~~n~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 75 FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHAR--TMGLKTVFTDHSLFGFADIGSILTNKLLPLSLANIDRIICV 152 (426)
T ss_pred hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHH--hcCceEEEeccccccccchhhhhhcceeeeeecCCCcEEEE
Confidence 223455556899999999988776544433322 22245889999875443221 122334578999999
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
|++.++...- +-.++++++.+|||.++.+.|.|.+... .+.+-..|+.++|+.++||+|.++
T Consensus 153 shtskentvl----r~~L~p~kvsvIPnAv~~~~f~P~~~~~--------------~S~~i~~ivv~sRLvyrKGiDll~ 214 (426)
T KOG1111|consen 153 SHTSKENTVL----RGALAPAKVSVIPNAVVTHTFTPDAADK--------------PSADIITIVVASRLVYRKGIDLLL 214 (426)
T ss_pred eecCCCceEE----EeccCHhHeeeccceeeccccccCcccc--------------CCCCeeEEEEEeeeeeccchHHHH
Confidence 9988754321 3357889999999999999998743210 123338999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCC
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~ 367 (396)
+++.++.+ ++|+++|+|+|+|+ .+..++++.+++.++++|.++|.+ +++.+.|.+.|||++||.
T Consensus 215 ~iIp~vc~-------~~p~vrfii~GDGP-----k~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSl-- 280 (426)
T KOG1111|consen 215 EIIPSVCD-------KHPEVRFIIIGDGP-----KRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSL-- 280 (426)
T ss_pred HHHHHHHh-------cCCCeeEEEecCCc-----ccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHH--
Confidence 99999887 56999999999998 778899999999999999999986 889999999999999999
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.|.||++++|||+||+|||+|++||..
T Consensus 281 TEafc~~ivEAaScGL~VVsTrVGGIp 307 (426)
T KOG1111|consen 281 TEAFCMVIVEAASCGLPVVSTRVGGIP 307 (426)
T ss_pred HHHHHHHHHHHHhCCCEEEEeecCCcc
Confidence 999999999999999999999999965
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-30 Score=247.69 Aligned_cols=274 Identities=16% Similarity=0.237 Sum_probs=191.4
Q ss_pred cEEEEEecc-CC-----CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhh-hhhc--ceEEEEcCch---
Q 016053 75 KLVLLVSHE-LS-----LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHK-MWDR--GVQVISAKGQ--- 142 (396)
Q Consensus 75 ~kIl~v~~~-~~-----~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~--- 142 (396)
.||++++++ ++ .||+|+++.++++.|.. +|++++...++ +.+. .... ++..++....
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 71 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPG--------YPEYTKVNDNCDIHYIGFSRIYKR 71 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCC--------CCchhhccCCCceEEEEeccccch
Confidence 466666654 22 28889999999999943 99999954443 1111 1111 2222211110
Q ss_pred --------------hh----h--hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccc
Q 016053 143 --------------ET----I--NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPL 202 (396)
Q Consensus 143 --------------~~----~--~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~ 202 (396)
.. . ....++|+||+|+..... ..+ ....+. .+++.+.|+.. ... .+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~~~--~~~-~~~~~~--~~~v~~~h~~~----~~~---~~~~ 139 (380)
T PRK15484 72 LFQKWTRLDPLPYSQRILNIAHKFTITKDSVIVIHNSMKLY--RQI-RERAPQ--AKLVMHMHNAF----EPE---LLDK 139 (380)
T ss_pred hhhhhhccCchhHHHHHHHHHHhcCCCCCcEEEEeCcHHhH--HHH-HhhCCC--CCEEEEEeccc----Chh---Hhcc
Confidence 10 1 112569999999854322 111 222222 45777788641 111 2235
Q ss_pred cccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCC
Q 016053 203 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG 282 (396)
Q Consensus 203 ~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~ 282 (396)
.+.+++.|....+.+.+. .+..++.+||||+|.+.|.+.. +...+++++++++..+|+|+||+.+.
T Consensus 140 ~~~ii~~S~~~~~~~~~~------~~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~ 205 (380)
T PRK15484 140 NAKIIVPSQFLKKFYEER------LPNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPD 205 (380)
T ss_pred CCEEEEcCHHHHHHHHhh------CCCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccc
Confidence 577788887776655432 3456799999999988776432 24467788988888999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc----cchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHH
Q 016053 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 356 (396)
Q Consensus 283 Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~----~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~ 356 (396)
||++.+++|++++.+ ++|+++|+|+|++... ..++.+.+++++++++ ++++|+|++ +++.++|++
T Consensus 206 Kg~~~Li~A~~~l~~-------~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~ 276 (380)
T PRK15484 206 KGILLLMQAFEKLAT-------AHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPL 276 (380)
T ss_pred cCHHHHHHHHHHHHH-------hCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHh
Confidence 999999999999865 3489999999988642 1235566777777665 679999986 689999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
||++|+||. |.|+||++++||||||+|||+|+.||..+
T Consensus 277 aDv~v~pS~-~~E~f~~~~lEAma~G~PVI~s~~gg~~E 314 (380)
T PRK15484 277 ADLVVVPSQ-VEEAFCMVAVEAMAAGKPVLASTKGGITE 314 (380)
T ss_pred CCEEEeCCC-CccccccHHHHHHHcCCCEEEeCCCCcHh
Confidence 999999998 25999999999999999999999999753
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-31 Score=248.48 Aligned_cols=267 Identities=14% Similarity=0.075 Sum_probs=183.1
Q ss_pred cEEEEEeccC------CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhh--cceEE---EEcCchh
Q 016053 75 KLVLLVSHEL------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQV---ISAKGQE 143 (396)
Q Consensus 75 ~kIl~v~~~~------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ 143 (396)
|||+++++.. ..||+++++.+++++|.++||+|++++.................... ..... .......
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 5999999875 55999999999999999999999999955432111100000000000 00000 0001112
Q ss_pred hhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHh
Q 016053 144 TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRE 223 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 223 (396)
.+.+..++|+||+|+.....+ .+...+ .+++++.|+........ ........+..++.|......+..
T Consensus 81 ~~~~~~~~Divh~~~~~~~~~--~~~~~~-----~~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~---- 148 (335)
T cd03802 81 RALAAGDFDIVHNHSLHLPLP--FARPLP-----VPVVTTLHGPPDPELLK-LYYAARPDVPFVSISDAQRRPWPP---- 148 (335)
T ss_pred HHHhcCCCCEEEecCcccchh--hhcccC-----CCEEEEecCCCCcccch-HHHhhCcCCeEEEecHHHHhhccc----
Confidence 344568899999999766554 222223 45788889774333222 223333445556655554443221
Q ss_pred hhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhc
Q 016053 224 RLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK 303 (396)
Q Consensus 224 ~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~ 303 (396)
..++.+||||+|.+.|.+. +.++..++++|++.+.||++.+++++++
T Consensus 149 -----~~~~~vi~ngvd~~~~~~~-------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--------- 195 (335)
T cd03802 149 -----LPWVATVHNGIDLDDYPFR-------------------GPKGDYLLFLGRISPEKGPHLAIRAARR--------- 195 (335)
T ss_pred -----ccccEEecCCcChhhCCCC-------------------CCCCCEEEEEEeeccccCHHHHHHHHHh---------
Confidence 1679999999999887542 2456689999999999999999999764
Q ss_pred cCCCCEEEEEEecCCCccchHHHHHHHHHHhcC-CCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh
Q 016053 304 LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 380 (396)
Q Consensus 304 ~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~-l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma 380 (396)
.+++|+++|++. ..+.+.....+.. +.++|+|+|++ +++.++|+.+|++++||. |.|+||++++||||
T Consensus 196 ---~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma 266 (335)
T cd03802 196 ---AGIPLKLAGPVS-----DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMA 266 (335)
T ss_pred ---cCCeEEEEeCCC-----CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHh
Confidence 589999999986 3344444444433 56899999997 568899999999999998 25999999999999
Q ss_pred cCCCEEEcCCCCCCC
Q 016053 381 FQLPVLVLSELHPSI 395 (396)
Q Consensus 381 ~G~PVI~t~~gG~~~ 395 (396)
||+|||+++.||..+
T Consensus 267 ~G~PvI~~~~~~~~e 281 (335)
T cd03802 267 CGTPVIAFRRGAVPE 281 (335)
T ss_pred cCCCEEEeCCCCchh
Confidence 999999999999763
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=247.84 Aligned_cols=277 Identities=16% Similarity=0.120 Sum_probs=197.7
Q ss_pred cEEEEEeccCCC---CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh--------
Q 016053 75 KLVLLVSHELSL---SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-------- 143 (396)
Q Consensus 75 ~kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 143 (396)
|||+++++.+.+ ||.++++.+++++|.++ ++|+|++..... ....++.+.......
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 67 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR------------FDSEGLTVKGYRPWSELKEANKA 67 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch------------hcCCCeEEEEecChhhccchhhh
Confidence 589999987653 88889999999999987 777777743221 012233333221110
Q ss_pred ---------hhhhccCCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeecccc--cC-----------chhhhccc
Q 016053 144 ---------TINTALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEMRGH--YF-----------KLDYVKHL 200 (396)
Q Consensus 144 ---------~~~~~~~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~~~~--~~-----------~~~~~~~~ 200 (396)
......++|+||+|+.........+. ..+ .|++++.|+.... +. .......+
T Consensus 68 ~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~-----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (388)
T TIGR02149 68 LGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYD-----KPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAI 142 (388)
T ss_pred hhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcC-----CCEEEEeecccccccccccccccchhHHHHHHHHHH
Confidence 11122479999999865543222222 223 4578888876321 00 00012234
Q ss_pred cccccceeeccccHHHHHHHHHhhh-cccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc
Q 016053 201 PLVAGAMIDSHVTAEYWKNRTRERL-RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 279 (396)
Q Consensus 201 ~~~~~~~~~s~~~~~~~~~~~~~~~-g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l 279 (396)
..++.+++.|....+.+.+ .+ +++..++.+||||+|.+.+.+.. +...+++++++++.++|+|+||+
T Consensus 143 ~~ad~vi~~S~~~~~~~~~----~~~~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 143 EAADRVIAVSGGMREDILK----YYPDLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred hhCCEEEEccHHHHHHHHH----HcCCCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEccc
Confidence 5678888888877666553 34 56677899999999998876432 34578889998888999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCC-CCcEEEecC-c--CCHHHHHH
Q 016053 280 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNK-T--LTVAPYLA 355 (396)
Q Consensus 280 ~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~-~--~~~~~~~~ 355 (396)
.+.||++.+++|++++. ++++++++|++... .++.+.+++.+++++. .++|.+++. . +++.++|+
T Consensus 211 ~~~Kg~~~li~a~~~l~----------~~~~l~i~g~g~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP----------KDVQVVLCAGAPDT-PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh----------hcCcEEEEeCCCCc-HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999874 47889999876532 2356777888877765 245777653 3 78999999
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+||++|+||. .|+||++++|||+||+|||+|+.||..
T Consensus 280 ~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~ 316 (388)
T TIGR02149 280 NAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIP 316 (388)
T ss_pred hCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHH
Confidence 9999999999 999999999999999999999999865
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=247.80 Aligned_cols=281 Identities=13% Similarity=0.109 Sum_probs=185.7
Q ss_pred cccEEEEEeccCCC--CChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhh--------------hhhhhhhh-----h
Q 016053 73 KSKLVLLVSHELSL--SGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEV--------------IYSLEHKM-----W 130 (396)
Q Consensus 73 ~~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~--------------~~~~~~~~-----~ 130 (396)
++|||++++..+.+ +|.......++.+|+++| |+|+++.+..+..+... .....+.. .
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 45899999977544 999899999999999999 79999996533111000 00000000 0
Q ss_pred hcceEE--EEc------------CchhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch--
Q 016053 131 DRGVQV--ISA------------KGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL-- 194 (396)
Q Consensus 131 ~~~~~~--~~~------------~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~-- 194 (396)
..++.+ ++- ..........+||+||++++....++..+.....+. ..++.++|.....|...
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~--~~vV~tyHT~y~~Y~~~~~ 160 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKF--RLVIGIVHTNYLEYVKREK 160 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcC--CcEEEEECCChHHHHHHhc
Confidence 011111 111 112233456899999999987766652222221111 22677788743232111
Q ss_pred -----h-hh----ccc--cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHH
Q 016053 195 -----D-YV----KHL--PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE 262 (396)
Q Consensus 195 -----~-~~----~~~--~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~ 262 (396)
. .. +++ ...+.+++.|....+ +. ....+..+|+|.+.|.+... ..++
T Consensus 161 ~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~-----------~~~i~~v~GVd~~~f~~~~~---------~~~~ 219 (462)
T PLN02846 161 NGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YP-----------RSIICNVHGVNPKFLEIGKL---------KLEQ 219 (462)
T ss_pred cchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hh-----------hCEEecCceechhhcCCCcc---------cHhh
Confidence 1 11 112 124566666653322 11 12444558999998875421 1222
Q ss_pred HcCCCCC--CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCc
Q 016053 263 SLGVRNE--DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 340 (396)
Q Consensus 263 ~~g~~~~--~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (396)
.+. .++ .+.++|+||+.++||++.+++|++++.+. .++++|+|+|+|+ +++++++.++++++..+
T Consensus 220 ~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~-------~~~~~l~ivGdGp-----~~~~L~~~a~~l~l~~~ 286 (462)
T PLN02846 220 QKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKE-------LSGLEVDLYGSGE-----DSDEVKAAAEKLELDVR 286 (462)
T ss_pred hcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhh-------CCCeEEEEECCCc-----cHHHHHHHHHhcCCcEE
Confidence 222 233 34689999999999999999999987652 3789999999997 88899999999988744
Q ss_pred EEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 341 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 341 V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+ |.|. .+..++|..+|+||+||. .|+||++++||||||+|||+++.+|.
T Consensus 287 v-f~G~-~~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~ 335 (462)
T PLN02846 287 V-YPGR-DHADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN 335 (462)
T ss_pred E-ECCC-CCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc
Confidence 4 7775 466689999999999999 99999999999999999999999985
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=239.01 Aligned_cols=286 Identities=21% Similarity=0.217 Sum_probs=208.2
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEE------EEcCchhhhhhcc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV------ISAKGQETINTAL 149 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 149 (396)
||+++++....||+++.+.+++++|.+.||+|.+++......................... ........+.+..
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 6899998888899999999999999999999999995433211110000000000000000 0011123344557
Q ss_pred CCcEEEEcCc-hhhHHHHHHHhcCCCccccceeeeeeecccccCch------hhhccccccccceeeccccHHHHHHHHH
Q 016053 150 KADLIVLNTA-VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 150 ~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
++|+||++.. ............ ..+.+++.|+........ .....+...+.+++.|....+.+.+
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--- 152 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAARL-----GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLK--- 152 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhhc-----CCceEEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhhHHH---
Confidence 8999999987 333222222211 256888899875332221 1344567888899999888877665
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
.++.+..++.+||||+|.+.+...... +..++.+++.+.|+++|++.+.||++.++++++.+.+
T Consensus 153 -~~~~~~~~~~vi~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~----- 216 (353)
T cd03811 153 -LLGIPPDKIEVIYNPIDIEEIRALAEE----------PLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK----- 216 (353)
T ss_pred -hhcCCccccEEecCCcChhhcCcccch----------hhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh-----
Confidence 344446789999999998877543210 0034556788999999999999999999999999865
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcC
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 382 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G 382 (396)
++++++|+++|.+. ..+.+++.++++++.++|++.|..+++.++|+.||++++||. .|++|++++|||++|
T Consensus 217 --~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G 287 (353)
T cd03811 217 --EGPDARLVILGDGP-----LREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALG 287 (353)
T ss_pred --cCCCceEEEEcCCc-----cHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhC
Confidence 23799999999886 667788899999999999999999999999999999999999 899999999999999
Q ss_pred CCEEEcCCCCCC
Q 016053 383 LPVLVLSELHPS 394 (396)
Q Consensus 383 ~PVI~t~~gG~~ 394 (396)
+|||+++.||.+
T Consensus 288 ~PvI~~~~~~~~ 299 (353)
T cd03811 288 TPVVATDCPGPR 299 (353)
T ss_pred CCEEEcCCCChH
Confidence 999999999865
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=242.22 Aligned_cols=290 Identities=18% Similarity=0.099 Sum_probs=199.4
Q ss_pred EEEEEeccCCCC-ChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhh---hhhhcceEEEEc--C-c-----
Q 016053 76 LVLLVSHELSLS-GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEH---KMWDRGVQVISA--K-G----- 141 (396)
Q Consensus 76 kIl~v~~~~~~g-G~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~-~----- 141 (396)
.|.|+++....| |+|+.+.+.+.+|++. |++|+++|...............+ .....++.++.. . .
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 588999998886 8899999999999998 899999996543211111100111 111223332221 1 0
Q ss_pred -h-h-------------hh--hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecc---ccc----------
Q 016053 142 -Q-E-------------TI--NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR---GHY---------- 191 (396)
Q Consensus 142 -~-~-------------~~--~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~---~~~---------- 191 (396)
. + .+ ....+||+++.++..+..+.......+ .+++..+|... ...
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~-----~~~i~y~h~P~~~~d~l~~~~~~~~~~ 156 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGG-----CPVGAYVHYPTISTDMLQKVRSREASY 156 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcC-----CeEEEEecCCcchHHHHHHHhhccccc
Confidence 0 0 00 012479999988854433222111112 46888888331 000
Q ss_pred --------------Cch--------hhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhh
Q 016053 192 --------------FKL--------DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED 249 (396)
Q Consensus 192 --------------~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~ 249 (396)
.+. ........++.++++|..+.+.+.+ .++. ..++.+||||+|.+.+.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~----~~~~-~~~~~vi~~gvd~~~~~~~~~ 231 (419)
T cd03806 157 NNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRS----LWKR-NTKPSIVYPPCDVEELLKLPL 231 (419)
T ss_pred cCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHH----HhCc-CCCcEEEcCCCCHHHhccccc
Confidence 000 0112235778888888888776654 3332 247999999999887653210
Q ss_pred hHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-cchHHHHH
Q 016053 250 NVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-QTKFESEL 328 (396)
Q Consensus 250 ~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~~~l 328 (396)
....+.++|+++||+.+.||++.+++|++++.+..++. ..++++|+|+|++... +.++.+++
T Consensus 232 ---------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~--~~~~~~lvivG~~~~~~~~~~~~~L 294 (419)
T cd03806 232 ---------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEE--IKEKIKLVLIGSCRNEDDEKRVEDL 294 (419)
T ss_pred ---------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCccc--ccCceEEEEEcCCCCcccHHHHHHH
Confidence 01245679999999999999999999999987643210 0136999999987533 23477889
Q ss_pred HHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 329 RNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 329 ~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++++++++|+|+|.. +++.++|+.||++|+||. .|+||++++||||||+|||+++.||+.
T Consensus 295 ~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~ 360 (419)
T cd03806 295 KLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPL 360 (419)
T ss_pred HHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCc
Confidence 9999999999999999985 789999999999999999 999999999999999999999999874
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-29 Score=241.37 Aligned_cols=286 Identities=15% Similarity=0.090 Sum_probs=192.7
Q ss_pred cEEEEEeccCCCC-ChHHHHHHHHHHHHhCCC--EEEEEeccCCCCchhhhhhhhhhhhhcce------EEEEcC-c---
Q 016053 75 KLVLLVSHELSLS-GGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGV------QVISAK-G--- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~g-G~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~--- 141 (396)
++|+|+++..+.| |+|+.+.+.+.+|++.|+ +|++.|.+......+ .+.......++ .++.++ .
T Consensus 34 ~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~---~l~~~~~~~~i~~~~~~~~v~l~~~~~~ 110 (463)
T PLN02949 34 RAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDS---LAARARDRFGVELLSPPKVVHLRKRKWI 110 (463)
T ss_pred cEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHH---HHHHHHhhcceecCCCceEEEecccccc
Confidence 4899999998775 999999999999999998 777777442211111 11111112222 112221 0
Q ss_pred ----h----------hhh------hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc----------
Q 016053 142 ----Q----------ETI------NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY---------- 191 (396)
Q Consensus 142 ----~----------~~~------~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~---------- 191 (396)
. +.+ .....| .|++.+......+..+...+ .++++++|......
T Consensus 111 ~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p-~v~vDt~~~~~~~pl~~~~~-----~~v~~yvH~p~~~~dm~~~v~~~~ 184 (463)
T PLN02949 111 EEETYPRFTMIGQSLGSVYLAWEALCKFTP-LYFFDTSGYAFTYPLARLFG-----CKVVCYTHYPTISSDMISRVRDRS 184 (463)
T ss_pred ccccCCceehHHHHHHHHHHHHHHHHhcCC-CEEEeCCCcccHHHHHHhcC-----CcEEEEEeCCcchHHHHHHHhhcc
Confidence 0 000 011344 46665532111112222223 56899999642110
Q ss_pred --C-------c--------hhhhc--------cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhh
Q 016053 192 --F-------K--------LDYVK--------HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 246 (396)
Q Consensus 192 --~-------~--------~~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~ 246 (396)
+ . ..+.+ ....++.++++|..+.+.+.+ .++. ++++.++|||+|.+.+..
T Consensus 185 ~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~~-~~~i~vvyp~vd~~~~~~ 259 (463)
T PLN02949 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWRI-PERIKRVYPPCDTSGLQA 259 (463)
T ss_pred cccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcCC-CCCeEEEcCCCCHHHccc
Confidence 0 0 00111 114677888888888776643 3343 357899999999875531
Q ss_pred hhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-cchHH
Q 016053 247 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-QTKFE 325 (396)
Q Consensus 247 ~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~ 325 (396)
.+. ..++++..++++||+.++||++.+|+|++++.+.+++ +.++++|+|+|++... +.++.
T Consensus 260 ~~~---------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~---~~~~~~LvIvG~~~~~~~~~~~ 321 (463)
T PLN02949 260 LPL---------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDA---DVPRPKLQFVGSCRNKEDEERL 321 (463)
T ss_pred CCc---------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccc---cCCCcEEEEEeCCCCcccHHHH
Confidence 110 0023456899999999999999999999988764432 2378999999998532 33466
Q ss_pred HHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 326 SELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 326 ~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+++++++++++++++|+|+|.. +++.++|+.||++|+||. .|+||++++||||+|+|||+++.||+.
T Consensus 322 ~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~ 390 (463)
T PLN02949 322 QKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPK 390 (463)
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCc
Confidence 8899999999999999999987 789999999999999999 999999999999999999999999974
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=257.03 Aligned_cols=308 Identities=16% Similarity=0.119 Sum_probs=202.1
Q ss_pred cccEEEEEecc-C------------CCCChHHHHHHHHHHHHhCC--CEEEEEeccCCCC--chhhhhhh----------
Q 016053 73 KSKLVLLVSHE-L------------SLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSE--EDEVIYSL---------- 125 (396)
Q Consensus 73 ~~~kIl~v~~~-~------------~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~--~~~~~~~~---------- 125 (396)
+++.|++|+.- . ..||...++.+|+++|.+.| |+|+++|...... +.....+.
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~ 247 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSEN 247 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccc
Confidence 45678888732 1 11566699999999999998 8999999432211 11111111
Q ss_pred --hhhhhhcceEEEEcCch-----------------------hhhhh-------------ccCCcEEEEcCchhhHHHHH
Q 016053 126 --EHKMWDRGVQVISAKGQ-----------------------ETINT-------------ALKADLIVLNTAVAGKWLDA 167 (396)
Q Consensus 126 --~~~~~~~~~~~~~~~~~-----------------------~~~~~-------------~~~~DiV~~~~~~~~~~~~~ 167 (396)
.......|+.++.++.. ..+.. ...||+||+|...++.....
T Consensus 248 ~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~ 327 (1050)
T TIGR02468 248 DGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAAL 327 (1050)
T ss_pred ccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHH
Confidence 01112236776554311 01100 01499999999777665444
Q ss_pred HHh-cCCCccccceeeeeeecccccC------------------c-hhh----hccccccccceeeccccHHHHHHHHH-
Q 016053 168 VLK-EDVPRVLPNVLWWIHEMRGHYF------------------K-LDY----VKHLPLVAGAMIDSHVTAEYWKNRTR- 222 (396)
Q Consensus 168 ~~~-~~~~~~~~~vv~~~h~~~~~~~------------------~-~~~----~~~~~~~~~~~~~s~~~~~~~~~~~~- 222 (396)
+.. .++ |++.+.|....... . ... ...+..++.+++.|..........+.
T Consensus 328 L~~~lgV-----P~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~ 402 (1050)
T TIGR02468 328 LSGALNV-----PMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDG 402 (1050)
T ss_pred HHHhhCC-----CEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhcc
Confidence 443 344 47888886421100 0 000 12245777888888776654322110
Q ss_pred -----------------hhhcccCCCEEEEecCCccchhhhhhhhHHHHH-------------hHHHHHHHcCCCCCCEE
Q 016053 223 -----------------ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRV-------------LREHVRESLGVRNEDLL 272 (396)
Q Consensus 223 -----------------~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~-------------~~~~~r~~~g~~~~~~~ 272 (396)
..+|...+++.|||||+|++.|.+.....+... ....+++ +..++++++
T Consensus 403 ~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r-~~~~pdkpv 481 (1050)
T TIGR02468 403 FDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMR-FFTNPRKPM 481 (1050)
T ss_pred CCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHh-hcccCCCcE
Confidence 012223458999999999999987532221100 0123333 334678889
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc------cchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 273 FAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA------QTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 273 il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~------~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
|+++||+.++||++.||+|+..+.+.. ..++++ +|+|+++.. +..+...++++++++++.++|.|.|+
T Consensus 482 IL~VGRL~p~KGi~~LIeAf~~L~~l~-----~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~ 555 (1050)
T TIGR02468 482 ILALARPDPKKNITTLVKAFGECRPLR-----ELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKH 555 (1050)
T ss_pred EEEEcCCccccCHHHHHHHHHHhHhhc-----cCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCC
Confidence 999999999999999999999986422 125666 466876421 12345678899999999999999998
Q ss_pred c--CCHHHHHHHc----CEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 347 T--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 347 ~--~~~~~~~~~a----Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
. +++.++|+.| |+||+||. .|+||++++||||||+|||+|+.||+.
T Consensus 556 v~~edvp~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~ 607 (1050)
T TIGR02468 556 HKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPV 607 (1050)
T ss_pred CCHHHHHHHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcH
Confidence 4 7899999988 69999999 999999999999999999999999975
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=249.31 Aligned_cols=307 Identities=16% Similarity=0.156 Sum_probs=195.9
Q ss_pred ccEEEEEeccC----C-------CCChHHHHHHHHHHH--------HhCCC----EEEEEeccCCCCchh-hhhhhhhhh
Q 016053 74 SKLVLLVSHEL----S-------LSGGPLLLMELAFLL--------RGVGT----KVNWITIQKPSEEDE-VIYSLEHKM 129 (396)
Q Consensus 74 ~~kIl~v~~~~----~-------~gG~~~~~~~l~~~L--------~~~G~----~V~vi~~~~~~~~~~-~~~~~~~~~ 129 (396)
.++|++++... . .||...++.+++++| +++|+ +|+|+|...+..... ....++...
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~ 334 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVY 334 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccccc
Confidence 36899888543 1 256568999999975 68999 778999543321111 111112222
Q ss_pred hhcceEEEEcC--ch--------------------------hhhhh--ccCCcEEEEcCchhhHHHHHH-HhcCCCcccc
Q 016053 130 WDRGVQVISAK--GQ--------------------------ETINT--ALKADLIVLNTAVAGKWLDAV-LKEDVPRVLP 178 (396)
Q Consensus 130 ~~~~~~~~~~~--~~--------------------------~~~~~--~~~~DiV~~~~~~~~~~~~~~-~~~~~~~~~~ 178 (396)
...++.++..+ .. +.+.. ..+||+||+|...++.....+ ...++|
T Consensus 335 ~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP---- 410 (784)
T TIGR02470 335 GTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVT---- 410 (784)
T ss_pred CCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCC----
Confidence 22355554432 10 01111 247999999998776654333 334544
Q ss_pred ceeeeeeecccc-------cCc---hhh---------hccccccccceeeccccHHHHHHHHH-----------hhh---
Q 016053 179 NVLWWIHEMRGH-------YFK---LDY---------VKHLPLVAGAMIDSHVTAEYWKNRTR-----------ERL--- 225 (396)
Q Consensus 179 ~vv~~~h~~~~~-------~~~---~~~---------~~~~~~~~~~~~~s~~~~~~~~~~~~-----------~~~--- 225 (396)
.+.+.|..... ++. ..+ ...+..++.+++.+........+... ..+
T Consensus 411 -~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vv 489 (784)
T TIGR02470 411 -QCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVV 489 (784)
T ss_pred -EEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeee
Confidence 56667754211 111 011 12234566677776432111111110 011
Q ss_pred -cc--cCCCEEEEecCCccchhhhhhhhHHHHH-----------hHHHHHHHcCC--CCCCEEEEEEecccCCCCHHHHH
Q 016053 226 -RI--KMPDTYVVHLGNSKELMEVAEDNVAKRV-----------LREHVRESLGV--RNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 226 -g~--~~~k~~vI~ngid~~~~~~~~~~~~~~~-----------~~~~~r~~~g~--~~~~~~il~vG~l~~~Kg~~~li 289 (396)
|+ ..+|+.+||+|+|.+.|.+......+.. ++.+.++.+|+ ++++++|+++||+.+.||++.++
T Consensus 490 nGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LI 569 (784)
T TIGR02470 490 HGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLV 569 (784)
T ss_pred cCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHH
Confidence 22 4578999999999998876532211100 12344577776 56788999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCC----ccc---hHHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHH----
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMN----AQT---KFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLA---- 355 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~----~~~---~~~~~l~~~~~~~~l~~~V~~~g~~---~~~~~~~~---- 355 (396)
+|+.++... .++++|+|+|++.. .+. .+.+++.++++++++.++|.|+|.+ .++.++|.
T Consensus 570 eA~~~l~~l-------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd 642 (784)
T TIGR02470 570 ECYGRSPKL-------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIAD 642 (784)
T ss_pred HHHHHhHhh-------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhc
Confidence 999876431 15799999998752 111 2446788899999999999999974 45666665
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++|+||+||. +|+||++++||||||+|||+|+.||++
T Consensus 643 ~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~ 679 (784)
T TIGR02470 643 TKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPL 679 (784)
T ss_pred cCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 2479999999 999999999999999999999999975
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=239.37 Aligned_cols=288 Identities=19% Similarity=0.153 Sum_probs=192.8
Q ss_pred EEEEEeccC--CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhh-----hhhh---hhcceEE-EEcC-chh
Q 016053 76 LVLLVSHEL--SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL-----EHKM---WDRGVQV-ISAK-GQE 143 (396)
Q Consensus 76 kIl~v~~~~--~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~-----~~~~---~~~~~~~-~~~~-~~~ 143 (396)
||+++++.. ..||+++.+.+++++|.+.||+|++++.............. .... ....... +... ...
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAW 80 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHH
Confidence 588998876 45888999999999999999999999954432211110000 0000 0000000 0000 011
Q ss_pred hhhhccCCcEEEEcCchhhHH---HHHHHhcCCCccccceeeeeeecccccC--chhh----------hcccccccccee
Q 016053 144 TINTALKADLIVLNTAVAGKW---LDAVLKEDVPRVLPNVLWWIHEMRGHYF--KLDY----------VKHLPLVAGAMI 208 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~---~~~~~~~~~~~~~~~vv~~~h~~~~~~~--~~~~----------~~~~~~~~~~~~ 208 (396)
......++|+||+|+...... ...+...+ .+++++.|+....+. .... .......+.+++
T Consensus 81 ~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 155 (375)
T cd03821 81 LRLNIREADIVHVHGLWSYPSLAAARAARKYG-----IPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHA 155 (375)
T ss_pred HHHhCCCCCEEEEecccchHHHHHHHHHHHhC-----CCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEE
Confidence 122346899999998433221 12222233 457778887543322 1111 111123333444
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHH
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 288 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~l 288 (396)
.+....... ..+....++.++|||+|.+.+.+... .. .|+.++.++++++|+++|++.+.||++.+
T Consensus 156 ~s~~~~~~~------~~~~~~~~~~vi~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~l 221 (375)
T cd03821 156 TSEQEAAEI------RRLGLKAPIAVIPNGVDIPPFAALPS-------RG-RRRKFPILPDKRIILFLGRLHPKKGLDLL 221 (375)
T ss_pred CCHHHHHHH------HhhCCcccEEEcCCCcChhccCcchh-------hh-hhhhccCCCCCcEEEEEeCcchhcCHHHH
Confidence 442222221 12335567999999999988764321 11 16777888889999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~ 366 (396)
++|+.++.+ ++++++|+++|.+.. .+...++..++++++.++|+|+|++ +++..+|+.||++|+||.
T Consensus 222 i~a~~~l~~-------~~~~~~l~i~G~~~~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~- 290 (375)
T cd03821 222 IEAFAKLAE-------RFPDWHLVIAGPDEG---GYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSH- 290 (375)
T ss_pred HHHHHHhhh-------hcCCeEEEEECCCCc---chHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccc-
Confidence 999999876 347999999998752 2456666667888999999999997 489999999999999999
Q ss_pred CCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.|+||++++|||+||+|||+++.+|..
T Consensus 291 -~e~~~~~~~Eama~G~PvI~~~~~~~~ 317 (375)
T cd03821 291 -SENFGIVVAEALACGTPVVTTDKVPWQ 317 (375)
T ss_pred -cCCCCcHHHHHHhcCCCEEEcCCCCHH
Confidence 899999999999999999999999865
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=242.46 Aligned_cols=275 Identities=12% Similarity=0.047 Sum_probs=174.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhh-hhhh----------hhhh-----hcceEEE-
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVI-YSLE----------HKMW-----DRGVQVI- 137 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-~~~~----------~~~~-----~~~~~~~- 137 (396)
||||+|......||+|+.+.+|++.+.++||+|.+++..+..+..... .... .... ..+...+
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 599999999999999999999999999999999999954433221100 0000 0000 0000001
Q ss_pred EcCch-hhhhhccCCcEEEEcCchhh---HHH-HH-HHhcCCCccccceeeeeeeccccc--------------------
Q 016053 138 SAKGQ-ETINTALKADLIVLNTAVAG---KWL-DA-VLKEDVPRVLPNVLWWIHEMRGHY-------------------- 191 (396)
Q Consensus 138 ~~~~~-~~~~~~~~~DiV~~~~~~~~---~~~-~~-~~~~~~~~~~~~vv~~~h~~~~~~-------------------- 191 (396)
..... +.+.+..+||+||+|...++ ... .. ...........|++|+.|++-..-
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp 160 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCC
Confidence 01111 22335689999999986542 211 11 000011122357999999874110
Q ss_pred ----Cchh--------hh---ccc----cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHH
Q 016053 192 ----FKLD--------YV---KHL----PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVA 252 (396)
Q Consensus 192 ----~~~~--------~~---~~~----~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~ 252 (396)
++.. +. ..+ ...+.+++.|...++. +.+.++ ..++.+||||+|++.+.+.+..
T Consensus 161 ~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~----~~~~~~--~~~i~vI~NGid~~~~~~~~~~-- 232 (405)
T PRK10125 161 TLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADA----FNSLYG--PGRCRIINNGIDMATEAILAEL-- 232 (405)
T ss_pred CccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHH----HHHHcC--CCCEEEeCCCcCcccccccccc--
Confidence 1000 00 001 1123345555544443 332333 4679999999997543221110
Q ss_pred HHHhHHHHHHHcCCCCCCEEEEEEecc--cCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHH
Q 016053 253 KRVLREHVRESLGVRNEDLLFAIINSV--SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 330 (396)
Q Consensus 253 ~~~~~~~~r~~~g~~~~~~~il~vG~l--~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~ 330 (396)
...+ .++++++|+++|+. .+.||++.+++|+.++. ++++|+|+|++.+. .
T Consensus 233 -----~~~~----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~----------~~~~L~ivG~g~~~-----~---- 284 (405)
T PRK10125 233 -----PPVR----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG----------DKIELHTFGKFSPF-----T---- 284 (405)
T ss_pred -----cccc----cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC----------CCeEEEEEcCCCcc-----c----
Confidence 0001 13566789999994 37899999999998752 58999999987411 0
Q ss_pred HHHhcCCCCcEEEecCc---CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 331 YVMQKKIQDRVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 331 ~~~~~~l~~~V~~~g~~---~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.+++.++|.. +++.++|++||+||+||. .|+||++++||||||+|||+|++||..
T Consensus 285 -------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~ 342 (405)
T PRK10125 285 -------AGNVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAR 342 (405)
T ss_pred -------ccceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChH
Confidence 1468888865 568999999999999999 999999999999999999999999965
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=238.72 Aligned_cols=275 Identities=16% Similarity=0.198 Sum_probs=179.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------- 142 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 142 (396)
|||||++.++ -.+..|+++|.++||+|++++......... |++++.....
T Consensus 1 ~il~~~~~~p-----~~~~~la~~L~~~G~~v~~~~~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~~~~~ 63 (396)
T cd03818 1 RILFVHQNFP-----GQFRHLAPALAAQGHEVVFLTEPNAAPPPG------------GVRVVRYRPPRGPTSGTHPYLRE 63 (396)
T ss_pred CEEEECCCCc-----hhHHHHHHHHHHCCCEEEEEecCCCCCCCC------------CeeEEEecCCCCCCCCCCccchh
Confidence 5888886443 246789999999999999999554421110 3444322111
Q ss_pred ---------------hhh-hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeee------eecccccC-----c--
Q 016053 143 ---------------ETI-NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWI------HEMRGHYF-----K-- 193 (396)
Q Consensus 143 ---------------~~~-~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~------h~~~~~~~-----~-- 193 (396)
..+ .+..+||+||+|.......+. +..+|. .+++.+. |.....+. .
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l---~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (396)
T cd03818 64 FEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFL---KDVWPD--APLIGYFEFYYRAEGADVGFDPEFPPSLD 138 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhH---HHhCCC--CCEEEEEeeeecCCCCCCCCCCCCCCchh
Confidence 011 133689999999865433221 111221 2233322 22111110 1
Q ss_pred --hhh-------hccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHc
Q 016053 194 --LDY-------VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL 264 (396)
Q Consensus 194 --~~~-------~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~ 264 (396)
... ...+..+|.+++.|....+.+.+ .+ .+++.|||||+|.+.|.+.+.. ....+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~----~~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~ 205 (396)
T cd03818 139 DALRLRNRNALILLALAQADAGVSPTRWQRSTFPA----EL---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGR 205 (396)
T ss_pred HHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcH----hh---ccceEEeCCCccccccCCCchh------hhcccccc
Confidence 000 12345778888888776665433 22 2679999999999988754311 11233334
Q ss_pred CCCCCCEEEEEEec-ccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-------cchHHHHHHHHHH-hc
Q 016053 265 GVRNEDLLFAIINS-VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-------QTKFESELRNYVM-QK 335 (396)
Q Consensus 265 g~~~~~~~il~vG~-l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~-------~~~~~~~l~~~~~-~~ 335 (396)
++.+++++|+|+|| +.+.||++.+++|++++.+ +.++++|+|+|++... ..++.+.+.+... ++
T Consensus 206 ~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~-------~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 278 (396)
T cd03818 206 VLTPGDEVITFVARNLEPYRGFHVFMRALPRLLR-------ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRL 278 (396)
T ss_pred cCCCCCeEEEEECCCcccccCHHHHHHHHHHHHH-------HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhccc
Confidence 45677889999997 9999999999999998865 3389999999974311 0112223222222 22
Q ss_pred CCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 336 KIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 336 ~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+ .++|+|+|++ +++.++|+.||++|+||. .|++|++++||||||+|||+|+.||.++
T Consensus 279 ~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e 337 (396)
T cd03818 279 D-LSRVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVRE 337 (396)
T ss_pred C-cceEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchh
Confidence 2 4789999986 689999999999999999 9999999999999999999999998754
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-29 Score=237.67 Aligned_cols=278 Identities=21% Similarity=0.175 Sum_probs=194.9
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc---------------------hhh
Q 016053 86 LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG---------------------QET 144 (396)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~ 144 (396)
.||+++++.+++++|+++||+|+|++......... ......++.+..... ...
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPP------IVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLR 93 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCC------ccccccceEEEecccccccCCChhhcchhHHHHHHHHHH
Confidence 48999999999999999999999999543321110 011122333322211 001
Q ss_pred hhhcc--CCcEEEEcCchhhHHHHHH-HhcCCCccccceeeeeeecccccCch--------------hhhccccccccce
Q 016053 145 INTAL--KADLIVLNTAVAGKWLDAV-LKEDVPRVLPNVLWWIHEMRGHYFKL--------------DYVKHLPLVAGAM 207 (396)
Q Consensus 145 ~~~~~--~~DiV~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~~h~~~~~~~~~--------------~~~~~~~~~~~~~ 207 (396)
..... +||+||+|....+.....+ ...+ .+++++.|+........ .....+..++.++
T Consensus 94 ~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 94 FLRREGGRPDLIHAHYWDSGLVALLLARRLG-----IPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred HHHhcCCCccEEEEecCccchHHHHHHhhcC-----CceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEE
Confidence 11223 9999999986544433322 2233 34677778653211100 0112345677777
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHH
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDL 287 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~ 287 (396)
+.|......+.+ .++.+..++.+||||+|.+.+.+.... ...++.++.++++++|+++||+.+.||++.
T Consensus 169 ~~s~~~~~~~~~----~~~~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ 237 (398)
T cd03800 169 ASTPQEAEELYS----LYGAYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGRLDPRKGIDT 237 (398)
T ss_pred EcCHHHHHHHHH----HccccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcccccccCHHH
Confidence 777766655543 334455669999999999877654221 112555667778899999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEEEEecCCCcc-chHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecC
Q 016053 288 FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ-TKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 288 li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~-~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS 364 (396)
+++|+..+.+. .++++|+++|++.... ..+...++++++++++.++|.|+|++ +++.++|+.||++++||
T Consensus 238 ll~a~~~l~~~-------~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps 310 (398)
T cd03800 238 LIRAYAELPEL-------RERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPA 310 (398)
T ss_pred HHHHHHHHHHh-------CCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecc
Confidence 99999998652 3789999999886432 22345678888999999999999996 68999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 365 QAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 365 ~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
. .|+||++++|||+||+|||+++.+|.+
T Consensus 311 ~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~ 338 (398)
T cd03800 311 L--YEPFGLTALEAMACGLPVVATAVGGPR 338 (398)
T ss_pred c--ccccCcHHHHHHhcCCCEEECCCCCHH
Confidence 9 999999999999999999999998864
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=232.47 Aligned_cols=277 Identities=24% Similarity=0.191 Sum_probs=194.2
Q ss_pred EEEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC---------c-hh
Q 016053 76 LVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------G-QE 143 (396)
Q Consensus 76 kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~ 143 (396)
|||++++... .||.++++.+++++|.++||+|++++.......... ...+..+.... . ..
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 72 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE--------ERNGHRVIRAPSLLNVASTPFSPS 72 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh--------hccCceEEEeecccccccccccHH
Confidence 6889987755 489999999999999999999999995543211110 11111111110 0 00
Q ss_pred h---h-hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccc------cCchhhhccccccccceeecccc
Q 016053 144 T---I-NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDYVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 144 ~---~-~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~------~~~~~~~~~~~~~~~~~~~s~~~ 213 (396)
. + ....++|+||+|.+............ ...+.+.+.|+.... .+.......+..++.+++.|...
T Consensus 73 ~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 148 (357)
T cd03795 73 FFKQLKKLAKKADVIHLHFPNPLADLALLLLP----RKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNY 148 (357)
T ss_pred HHHHHHhcCCCCCEEEEecCcchHHHHHHHhc----cCceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHH
Confidence 1 1 23578999999986544332222221 124567777754211 01111223456777788777776
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
.+.+.. .... ..++.+||||+|.+.+.+.... +. .....+.+.+.|+++|++.+.||++.+++|++
T Consensus 149 ~~~~~~----~~~~-~~~~~~i~~gi~~~~~~~~~~~------~~---~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 149 AETSPV----LRRF-RDKVRVIPLGLDPARYPRPDAL------EE---AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred HHHHHH----hcCC-ccceEEecCCCChhhcCCcchh------hh---HhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 654432 2222 3679999999999877643210 00 22334567789999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
++ .+++|+|+|+|+ ..+.+++.++++++.++|+|+|++ +++..+|+.||++++||....|+|
T Consensus 215 ~l-----------~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~ 278 (357)
T cd03795 215 AL-----------PDAPLVIVGEGP-----LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAF 278 (357)
T ss_pred hc-----------cCcEEEEEeCCh-----hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCccccccc
Confidence 76 379999999986 677888999889999999999997 569999999999999996225999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++++|||+||+|||+|+.+|..
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~ 301 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGG 301 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCch
Confidence 99999999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=237.41 Aligned_cols=292 Identities=12% Similarity=0.043 Sum_probs=194.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh---------
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE--------- 143 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (396)
+.+||++++. ...|++.++.+++++|.++||+|++++...+.. ..+.....|+.++......
T Consensus 2 ~~~~~~~~~~--~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 72 (415)
T cd03816 2 KRKRVCVLVL--GDIGRSPRMQYHALSLAKHGWKVDLVGYLETPP-------HDEILSNPNITIHPLPPPPQRLNKLPFL 72 (415)
T ss_pred CccEEEEEEe--cccCCCHHHHHHHHHHHhcCceEEEEEecCCCC-------CHHHhcCCCEEEEECCCCccccccchHH
Confidence 3467888775 346777788999999999999999999654321 1111334566665543221
Q ss_pred ----------------hhhhccCCcEEEEcCchhh--HHHHH--HHhcCCCccccceeeeeeeccccc----C--ch---
Q 016053 144 ----------------TINTALKADLIVLNTAVAG--KWLDA--VLKEDVPRVLPNVLWWIHEMRGHY----F--KL--- 194 (396)
Q Consensus 144 ----------------~~~~~~~~DiV~~~~~~~~--~~~~~--~~~~~~~~~~~~vv~~~h~~~~~~----~--~~--- 194 (396)
.+....++|+||+|.+... .+... ....+ .+++++.|+..... . ..
T Consensus 73 ~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~-----~~~V~~~h~~~~~~~~~~~~~~~~~~ 147 (415)
T cd03816 73 LFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRR-----TKLIIDWHNYGYTILALKLGENHPLV 147 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC-----CeEEEEcCCchHHHHhcccCCCCHHH
Confidence 0123468999999874432 11121 12223 45777888752100 0 00
Q ss_pred hh-----hccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHH-------
Q 016053 195 DY-----VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE------- 262 (396)
Q Consensus 195 ~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~------- 262 (396)
.. ...++.++.+++.|..+.+++.+ ++.+.+++.|||||. .+.|.+.+.... +...++
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-----~~~~~~ki~vI~Ng~-~~~f~p~~~~~~----~~~~~~~~~~~~~ 217 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-----FNNWKIRATVLYDRP-PEQFRPLPLEEK----HELFLKLAKTFLT 217 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh-----hhccCCCeeecCCCC-HHHceeCcHHHH----HHHHHhccccccc
Confidence 01 12335688888888888777643 467789999999994 455554332111 111111
Q ss_pred ------HcCC-CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc
Q 016053 263 ------SLGV-RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 335 (396)
Q Consensus 263 ------~~g~-~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~ 335 (396)
..++ +++..+++++||+.+.||++.+++|++.+.+...+. .++|+++|+|+|+|+ .+++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~-~~~~~i~l~ivG~G~-----~~~~l~~~~~~~ 291 (415)
T cd03816 218 RELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG-PKLPKLLCIITGKGP-----LKEKYLERIKEL 291 (415)
T ss_pred cccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc-ccCCCEEEEEEecCc-----cHHHHHHHHHHc
Confidence 1122 244567888999999999999999999986532110 023689999999996 788999999999
Q ss_pred CCCCcEEEecCc--CCHHHHHHHcCEEEecCCC-CCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 336 KIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA-WGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 336 ~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~-~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++.+.+.|++ +++.++|++||++|.|+.. ..|++|++++||||||+|||+|+.||..
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~ 353 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCID 353 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHH
Confidence 997544455654 8999999999999975321 1588999999999999999999998764
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-29 Score=236.10 Aligned_cols=271 Identities=16% Similarity=0.103 Sum_probs=193.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE-----------------E
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI-----------------S 138 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~ 138 (396)
+|+++.+...++ +++++.++++.|. |+++++++........ ......++..+ .
T Consensus 1 ~~~~~~~~~~~~-~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (367)
T cd05844 1 RVLIFRPLLLAP-SETFVRNQAEALR--RFRPVYVGGRRLGPAP-------LGALAVRLADLAGGKAGLRLGALRLLTGS 70 (367)
T ss_pred CEEEEeCCCCCC-chHHHHHHHHhcc--cCCcEEEEeeccCCCC-------CcccceeeeecccchhHHHHHHHHhcccc
Confidence 467777655443 7899999999995 7888888744322100 00011111111 1
Q ss_pred cCchhhhhhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeecccccCc------------hhhhcccccccc
Q 016053 139 AKGQETINTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFK------------LDYVKHLPLVAG 205 (396)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~------------~~~~~~~~~~~~ 205 (396)
......+.+..+||+||+|....+.... .+...+ .+++++.|+....... ......++..+.
T Consensus 71 ~~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~-----~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 145 (367)
T cd05844 71 APQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLG-----VPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAAL 145 (367)
T ss_pred ccHHHHHHHhhCCCEEEeccCchHHHHHHHHHHcC-----CCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCE
Confidence 1112233456899999999765444333 334445 3477788864311111 111233456788
Q ss_pred ceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCH
Q 016053 206 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQ 285 (396)
Q Consensus 206 ~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~ 285 (396)
+++.|....+.+. .+|++.+++.++|||+|.+.+.+.. ...++..++++|++.+.||+
T Consensus 146 ii~~s~~~~~~~~-----~~~~~~~~i~vi~~g~d~~~~~~~~-----------------~~~~~~~i~~~G~~~~~K~~ 203 (367)
T cd05844 146 FIAVSQFIRDRLL-----ALGFPPEKVHVHPIGVDTAKFTPAT-----------------PARRPPRILFVGRFVEKKGP 203 (367)
T ss_pred EEECCHHHHHHHH-----HcCCCHHHeEEecCCCCHHhcCCCC-----------------CCCCCcEEEEEEeeccccCh
Confidence 8888877766554 3377778899999999988775321 12456789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 286 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 286 ~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
+.+++|++.+.+ ++++++|+++|+|+ +.++++++++++++.++|+|+|.+ +++.++|+.||++|+|
T Consensus 204 ~~li~a~~~l~~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~p 271 (367)
T cd05844 204 LLLLEAFARLAR-------RVPEVRLVIIGDGP-----LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271 (367)
T ss_pred HHHHHHHHHHHH-------hCCCeEEEEEeCch-----HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEEC
Confidence 999999998865 33799999999875 778899999999999999999997 6799999999999999
Q ss_pred CCC----CCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 364 SQA----WGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 364 S~~----~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|.. ..|+||++++|||+||+|||+++.+|..+
T Consensus 272 s~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e 307 (367)
T cd05844 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPE 307 (367)
T ss_pred cccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchh
Confidence 972 14999999999999999999999998764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-29 Score=235.05 Aligned_cols=278 Identities=17% Similarity=0.096 Sum_probs=200.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEE-cC---------chhhh
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-AK---------GQETI 145 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~ 145 (396)
|||++++..+.+ +++++.+++++|.++||+|++++.......... ............ .. .....
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVH-----PEDRAELARTRYLARSLALLAQALVLARE 74 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCccccccc-----ccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 589999876554 789999999999999999999995443211000 000000000000 00 01112
Q ss_pred hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch--hhhccccccccceeeccccHHHHHHHHHh
Q 016053 146 NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL--DYVKHLPLVAGAMIDSHVTAEYWKNRTRE 223 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 223 (396)
.+..++|+||+|................ ..+++++.|......... .....++.++.+++.+....+.+.+
T Consensus 75 ~~~~~~Dii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~l~~---- 147 (355)
T cd03799 75 LRRLGIDHIHAHFGTTPATVAMLASRLG---GIPYSFTAHGKDIFRSPDAIDLDEKLARADFVVAISEYNRQQLIR---- 147 (355)
T ss_pred HHhcCCCEEEECCCCchHHHHHHHHHhc---CCCEEEEEecccccccCchHHHHHHHhhCCEEEECCHHHHHHHHH----
Confidence 2347899999998643332222222111 245777788653222222 3445566788888888877776554
Q ss_pred hhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhc
Q 016053 224 RLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK 303 (396)
Q Consensus 224 ~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~ 303 (396)
.++....++.++|||+|.+.+.+.. .....+++.|+++|++.+.||++.+++++.++.+
T Consensus 148 ~~~~~~~~~~vi~~~~d~~~~~~~~---------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~------ 206 (355)
T cd03799 148 LLGCDPDKIHVVHCGVDLERFPPRP---------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD------ 206 (355)
T ss_pred hcCCCcccEEEEeCCcCHHHcCCcc---------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh------
Confidence 3466778899999999988775431 1123567899999999999999999999998765
Q ss_pred cCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCC------CCccHHH
Q 016053 304 LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG------ECFGRIT 375 (396)
Q Consensus 304 ~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~------E~fg~~~ 375 (396)
++++++|+++|.+. ..+.+++.++++++.++|++.|.. +++..+|++||++++||. . |+||+++
T Consensus 207 -~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~~~~~ 278 (355)
T cd03799 207 -RGIDFRLDIVGDGP-----LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGLPVVL 278 (355)
T ss_pred -cCCCeEEEEEECCc-----cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCccHHH
Confidence 33799999999986 667888999999999999999997 789999999999999999 7 9999999
Q ss_pred HHHHhcCCCEEEcCCCCCCC
Q 016053 376 IEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 376 lEAma~G~PVI~t~~gG~~~ 395 (396)
+|||+||+|||+++.||.+.
T Consensus 279 ~Ea~a~G~Pvi~~~~~~~~~ 298 (355)
T cd03799 279 MEAMAMGLPVISTDVSGIPE 298 (355)
T ss_pred HHHHHcCCCEEecCCCCcch
Confidence 99999999999999988653
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=233.32 Aligned_cols=272 Identities=15% Similarity=0.182 Sum_probs=183.4
Q ss_pred EEEEEecc---CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh---------
Q 016053 76 LVLLVSHE---LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE--------- 143 (396)
Q Consensus 76 kIl~v~~~---~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (396)
||++++.. ...||+++++.+++++|.++||+|+|++........ .....|++++......
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~ 72 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK--------ETEYNGVRLIHIPAPEIGGLGTIIY 72 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc--------ccccCCceEEEcCCCCccchhhhHH
Confidence 57888654 233999999999999999999999999955432110 1122345544332110
Q ss_pred ---hhh----hccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--Cc---hhhh-----ccccccccc
Q 016053 144 ---TIN----TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--FK---LDYV-----KHLPLVAGA 206 (396)
Q Consensus 144 ---~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--~~---~~~~-----~~~~~~~~~ 206 (396)
.+. ...++|+||...+........+...+ .+++++.|+..... +. .... ..+...+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i 147 (363)
T cd04955 73 DILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKG-----KKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRL 147 (363)
T ss_pred HHHHHHHHHhccCCeEEEEecCccHHHHHHHHHhcC-----CCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEE
Confidence 111 13445555555444333333333333 45788888753110 00 1111 123466777
Q ss_pred eeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 207 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
++.|....+.+.+ .+|.+ . .+||||+|...+.+ +...++.++++++. .++++|++.+.||++
T Consensus 148 i~~s~~~~~~~~~----~~~~~--~-~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~-~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 148 IADSPGIKEYLKE----KYGRD--S-TYIPYGADHVVSSE----------EDEILKKYGLEPGR-YYLLVGRIVPENNID 209 (363)
T ss_pred EeCCHHHHHHHHH----hcCCC--C-eeeCCCcChhhcch----------hhhhHHhcCCCCCc-EEEEEecccccCCHH
Confidence 7777777766543 45543 2 89999999877643 12234556665544 578999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHH-hcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM-QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~-~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
.+++|++++. .+++|+++|+++. ...+.+.+. +++..++|+|+|++ +++..+|.+||++++|
T Consensus 210 ~li~a~~~l~----------~~~~l~ivG~~~~-----~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~p 274 (363)
T cd04955 210 DLIEAFSKSN----------SGKKLVIVGNADH-----NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLH 274 (363)
T ss_pred HHHHHHHhhc----------cCceEEEEcCCCC-----cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeC
Confidence 9999999863 3799999999852 223333333 56778899999986 6788999999999999
Q ss_pred CCCCC-CCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 364 SQAWG-ECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 364 S~~~~-E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|. . |+||++++|||+||+|||+|+.||..+
T Consensus 275 s~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e 305 (363)
T cd04955 275 GH--SVGGTNPSLLEAMAYGCPVLASDNPFNRE 305 (363)
T ss_pred Cc--cCCCCChHHHHHHHcCCCEEEecCCccce
Confidence 99 6 999999999999999999999998653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=233.10 Aligned_cols=287 Identities=20% Similarity=0.216 Sum_probs=201.8
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhh-----hcc--eEEEEcCchhhhh
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-----DRG--VQVISAKGQETIN 146 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~ 146 (396)
|||+++....+ ||++..+.+++++|.+.||+|++++................... ... .............
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIIL 80 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHH
Confidence 58888876543 88889999999999999999999995443211110000000000 000 0000001112234
Q ss_pred hccCCcEEEEcCchhhHHHHH--HHhcCCCccccceeeeeeecccccC----------c-----hhhhccccccccceee
Q 016053 147 TALKADLIVLNTAVAGKWLDA--VLKEDVPRVLPNVLWWIHEMRGHYF----------K-----LDYVKHLPLVAGAMID 209 (396)
Q Consensus 147 ~~~~~DiV~~~~~~~~~~~~~--~~~~~~~~~~~~vv~~~h~~~~~~~----------~-----~~~~~~~~~~~~~~~~ 209 (396)
...+||+||++++........ ..+.+ .+++++.|+....+. . ......+..++.+++.
T Consensus 81 ~~~~~Div~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 81 KELGPDIVHTHTPFSLGLLGLRVARKLG-----IPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred hhcCCCEEEECCchhhhhHHHHHHHHcC-----CCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 558999999998754332222 22233 457778886432110 0 0112334567777777
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
+....+.+. .++.. .++.++|||+|...+.+.. ....++.++..++++.|+++|++.+.||++.++
T Consensus 156 s~~~~~~~~-----~~~~~-~~~~vi~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~ 221 (374)
T cd03817 156 SEKIADLLR-----EYGVK-RPIEVIPTGIDLDRFEPVD--------GDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLI 221 (374)
T ss_pred cHHHHHHHH-----hcCCC-CceEEcCCccchhccCccc--------hhHHHHhcCCCCCCeEEEEEeeeecccCHHHHH
Confidence 777655544 34444 4599999999998876532 122366777778889999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCC
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~ 367 (396)
++++.+.+. +++++|+++|.+. ..+.+++.++++++.++|.|+|.+ +++..+|+.||++++||.
T Consensus 222 ~~~~~~~~~-------~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~-- 287 (374)
T cd03817 222 RAFARLLKE-------EPDVKLVIVGDGP-----EREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST-- 287 (374)
T ss_pred HHHHHHHHh-------CCCeEEEEEeCCc-----hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc--
Confidence 999988652 3789999999986 778888999889999999999987 789999999999999999
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
.|++|++++|||+||+|||+++.|+.+.
T Consensus 288 ~e~~~~~~~Ea~~~g~PvI~~~~~~~~~ 315 (374)
T cd03817 288 TETQGLVLLEAMAAGLPVVAVDAPGLPD 315 (374)
T ss_pred ccCcChHHHHHHHcCCcEEEeCCCChhh
Confidence 9999999999999999999999998653
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=228.92 Aligned_cols=269 Identities=19% Similarity=0.174 Sum_probs=195.4
Q ss_pred EEEEEeccCC-CCChHHHHHHHHHHHHhCCCEEEEEeccCCC-CchhhhhhhhhhhhhcceE----------EEEcCchh
Q 016053 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQ----------VISAKGQE 143 (396)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 143 (396)
||+++++... .||+++.+.+++++|.+.||+|++++..... .... .........+. ........
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYE----LDPKIKVIDLGDKRDSKLLARFKKLRRLR 76 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccc----cCCccceeecccccccchhccccchHHHH
Confidence 5888888877 7999999999999999999999999954432 1000 11111000000 01111223
Q ss_pred hhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh-----hhccccccccceeeccccHHHHH
Q 016053 144 TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-----YVKHLPLVAGAMIDSHVTAEYWK 218 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~ 218 (396)
.+.+..+||+||++.+....++. ....+. .+++.+.|+......... ....++.++.+++.|......
T Consensus 77 ~~l~~~~~d~i~~~~~~~~~~~~-~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-- 149 (348)
T cd03820 77 KLLKNNKPDVVISFLTSLLTFLA-SLGLKI----VKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRAL-- 149 (348)
T ss_pred HhhcccCCCEEEEcCchHHHHHH-HHhhcc----ccEEEecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHHH--
Confidence 44456899999999876222222 222221 357777786543222211 233456788888888776511
Q ss_pred HHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHH
Q 016053 219 NRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLEL 298 (396)
Q Consensus 219 ~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~ 298 (396)
.......++.++|||++...+... ...+++.++++|++.+.||++.++++++++.+
T Consensus 150 -----~~~~~~~~~~vi~~~~~~~~~~~~------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~- 205 (348)
T cd03820 150 -----YYKKFNKNVVVIPNPLPFPPEEPS------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK- 205 (348)
T ss_pred -----hhccCCCCeEEecCCcChhhcccc------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh-
Confidence 223456789999999998765421 13567899999999999999999999999865
Q ss_pred HHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 299 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 299 ~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
+.++++|+|+|++. +.+.+++.++++++.++|.+.|..+++.++|+.||++++||. .|+||++++||
T Consensus 206 ------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea 272 (348)
T cd03820 206 ------KHPDWKLRIVGDGP-----EREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSR--FEGFPMVLLEA 272 (348)
T ss_pred ------cCCCeEEEEEeCCC-----CHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCcc--ccccCHHHHHH
Confidence 34899999999986 667788889999999999999999999999999999999999 89999999999
Q ss_pred HhcCCCEEEcCCCC
Q 016053 379 MAFQLPVLVLSELH 392 (396)
Q Consensus 379 ma~G~PVI~t~~gG 392 (396)
|+||+|||+++.+|
T Consensus 273 ~a~G~Pvi~~~~~~ 286 (348)
T cd03820 273 MAFGLPVISFDCPT 286 (348)
T ss_pred HHcCCCEEEecCCC
Confidence 99999999999765
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=232.60 Aligned_cols=285 Identities=18% Similarity=0.133 Sum_probs=191.1
Q ss_pred EEEEEeccCC-CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc------Cchhhhhhc
Q 016053 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------KGQETINTA 148 (396)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (396)
||+|+++..+ .||.++++.+++++|.+.||+|++++........... . .......... .......+.
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYG---G---EQEVVRVIVLDNPLDYRRAARAIRL 74 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCC---C---cccceeeeecCCchhHHHHHHHHhh
Confidence 6899998876 5999999999999999999999999844332111100 0 0011111111 112234456
Q ss_pred cCCcEEEEcCch---hhHHHHHHHhcCCCccccceeeeeeeccccc----CchhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAV---AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~---~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
.+||+||++... .......+... ......+++++.|+..... ........++.++.+++.| .+...+..
T Consensus 75 ~~~dii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s---~~~~~~~~ 150 (366)
T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLL-LRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMS---SELLRALL 150 (366)
T ss_pred cCCCEEEEeeccccccchhhHHHHHH-HhhcCCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEee---HHHHHHHH
Confidence 899999997621 11111111110 0011256888999862111 1122334556788888887 22222211
Q ss_pred HhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHh
Q 016053 222 RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKE 301 (396)
Q Consensus 222 ~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~ 301 (396)
. .. ...++.+||||+|...+..... .++.....+.++|+++|++.+.||++.+++|++++.+
T Consensus 151 ~-~~--~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~---- 212 (366)
T cd03822 151 L-RA--YPEKIAVIPHGVPDPPAEPPES-----------LKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVA---- 212 (366)
T ss_pred h-hc--CCCcEEEeCCCCcCcccCCchh-----------hHhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHh----
Confidence 1 11 1468999999999876643211 1334445678999999999999999999999998875
Q ss_pred hccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC-c--CCHHHHHHHcCEEEecCCCCCC--CccHHHH
Q 016053 302 KKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGE--CFGRITI 376 (396)
Q Consensus 302 ~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~-~--~~~~~~~~~aDv~v~pS~~~~E--~fg~~~l 376 (396)
++++++|+++|++.+..........++++++++.++|.|+|. . +++.++|+.||++++||. .| ++|++++
T Consensus 213 ---~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~ 287 (366)
T cd03822 213 ---KHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLA 287 (366)
T ss_pred ---hCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHH
Confidence 347999999999863321111111134788899999999987 4 789999999999999999 89 9999999
Q ss_pred HHHhcCCCEEEcCCCCC
Q 016053 377 EAMAFQLPVLVLSELHP 393 (396)
Q Consensus 377 EAma~G~PVI~t~~gG~ 393 (396)
|||+||+|||+++.||.
T Consensus 288 Ea~a~G~PvI~~~~~~~ 304 (366)
T cd03822 288 YAIGFGKPVISTPVGHA 304 (366)
T ss_pred HHHHcCCCEEecCCCCh
Confidence 99999999999999983
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-28 Score=228.83 Aligned_cols=261 Identities=19% Similarity=0.174 Sum_probs=183.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (396)
|||++++.....||+++....++++|.++||+|++++.... .........++|+|
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~-------------------------~~~~~~~~~~~dii 55 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK-------------------------ALISKIEIINADIV 55 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc-------------------------hhhhChhcccCCEE
Confidence 58999998777799999999999999999999999995532 11123345789999
Q ss_pred EEcCchhhHH-HHHHHhcCCCccccceeeeeeeccccc----Cch-------------------------h-hh---ccc
Q 016053 155 VLNTAVAGKW-LDAVLKEDVPRVLPNVLWWIHEMRGHY----FKL-------------------------D-YV---KHL 200 (396)
Q Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~-------------------------~-~~---~~~ 200 (396)
|+|......+ ...+.+. . ...++++++|+..... +.. . +. ..+
T Consensus 56 h~~~~~~~~~~~~~~~~~-~--~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (365)
T cd03825 56 HLHWIHGGFLSIEDLSKL-L--DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAW 132 (365)
T ss_pred EEEccccCccCHHHHHHH-H--cCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHh
Confidence 9987433221 1111121 0 1245788888752110 000 0 00 000
Q ss_pred -cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc
Q 016053 201 -PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 279 (396)
Q Consensus 201 -~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l 279 (396)
...+.+++.+....+.+. +.+.++..++.++|||+|.+.+.+.. +...++.+++++++.++++.|+.
T Consensus 133 ~~~~~~~v~~s~~~~~~~~----~~~~~~~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~ 200 (365)
T cd03825 133 ADLNLTIVAPSRWLADCAR----SSSLFKGIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVG 200 (365)
T ss_pred ccCCcEEEehhHHHHHHHH----hccccCCCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecC
Confidence 122234444444444333 23346678899999999998875432 34567788888888888888777
Q ss_pred cC--CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC---CHHHHH
Q 016053 280 SR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL---TVAPYL 354 (396)
Q Consensus 280 ~~--~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~---~~~~~~ 354 (396)
.. .||++.++++++.+.++ ..++++++++|++. .... .++.++|+++|+.+ ++.++|
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~------~~~~~~~~i~G~~~-----~~~~-------~~~~~~v~~~g~~~~~~~~~~~~ 262 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAER------WKDDIELVVFGASD-----PEIP-------PDLPFPVHYLGSLNDDESLALIY 262 (365)
T ss_pred CCccccCHHHHHHHHHHhhhc------cCCCeEEEEeCCCc-----hhhh-------ccCCCceEecCCcCCHHHHHHHH
Confidence 65 89999999999987642 03789999999875 1111 14557899999975 688999
Q ss_pred HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 355 ~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+.||++++||. .|+||++++|||+||+|||+++.||...
T Consensus 263 ~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e 301 (365)
T cd03825 263 SAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPD 301 (365)
T ss_pred HhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChh
Confidence 99999999999 9999999999999999999999998754
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=223.67 Aligned_cols=266 Identities=19% Similarity=0.174 Sum_probs=184.3
Q ss_pred EEEEEeccCCC---CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEE--------------
Q 016053 76 LVLLVSHELSL---SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-------------- 138 (396)
Q Consensus 76 kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 138 (396)
|||++++.... ||+++++.+++++|.++||+|++++.......... .........
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 72 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDK--------EVIGVVVYGRPIDEVLRSALPRD 72 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccc--------ccccceeeccccccccCCCchhh
Confidence 58899876543 78899999999999999999999995433211100 000000000
Q ss_pred ------------cCchhhhhhccCCcEEEEcCchhh--HHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccc
Q 016053 139 ------------AKGQETINTALKADLIVLNTAVAG--KWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVA 204 (396)
Q Consensus 139 ------------~~~~~~~~~~~~~DiV~~~~~~~~--~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~ 204 (396)
....+.+.+..+||+||++.+... .....+...+ .++++++|+.. +............+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~-----~~~i~~~hd~~--~~~~~~~~~~~~~d 145 (359)
T cd03823 73 LFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRG-----IPIVLTLHDYW--LICPRQGLFKKGGD 145 (359)
T ss_pred hhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcC-----CCEEEEEeeee--eecchhhhhccCCC
Confidence 001123344579999999985322 2222233333 45788888752 11111111122337
Q ss_pred cceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCC
Q 016053 205 GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKG 284 (396)
Q Consensus 205 ~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg 284 (396)
.+++.|....+.+.+ .+....++.+|+||+|...+.+... +.++++++|+++|++.+.||
T Consensus 146 ~ii~~s~~~~~~~~~-----~~~~~~~~~vi~n~~~~~~~~~~~~---------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 146 AVIAPSRFLLDRYVA-----NGLFAEKISVIRNGIDLDRAKRPRR---------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred EEEEeCHHHHHHHHH-----cCCCccceEEecCCcChhhcccccc---------------CCCCCceEEEEEecCccccC
Confidence 777777776665543 3334568999999999987653210 23467889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEe
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQ 362 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~ 362 (396)
++.++++++++.+ ++++|+++|.+. ......... +..++|+++|+. +++.++|++||++++
T Consensus 206 ~~~li~~~~~l~~---------~~~~l~i~G~~~-----~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 268 (359)
T cd03823 206 VDLLLEAFKRLPR---------GDIELVIVGNGL-----ELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268 (359)
T ss_pred HHHHHHHHHHHHh---------cCcEEEEEcCch-----hhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 9999999998764 589999999986 222222222 556899999997 899999999999999
Q ss_pred cCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 363 NSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 363 pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||.. .|++|++++|||+||+|||+|+.+|..
T Consensus 269 ps~~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~~ 299 (359)
T cd03823 269 PSIW-PENFPLVIREALAAGVPVIASDIGGMA 299 (359)
T ss_pred cCcc-cCCCChHHHHHHHCCCCEEECCCCCHH
Confidence 9973 799999999999999999999998854
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=222.43 Aligned_cols=272 Identities=19% Similarity=0.184 Sum_probs=192.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-------------- 141 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 141 (396)
||+++++. .||.+.+...++++|.+.||+|++++....... .....++.+.....
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE---------ELEALGVKVIPIPLDRRGINPFKDLKAL 69 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc---------ccccCCceEEeccccccccChHhHHHHH
Confidence 58888876 688889999999999999999999996544311 11223333322211
Q ss_pred --hhhhhhccCCcEEEEcCchhhHHHHHHHh-cCCCccccceeeeeeecccccCchh---------hhccccccccceee
Q 016053 142 --QETINTALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYFKLD---------YVKHLPLVAGAMID 209 (396)
Q Consensus 142 --~~~~~~~~~~DiV~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~h~~~~~~~~~~---------~~~~~~~~~~~~~~ 209 (396)
...+.+..+||+||++......+...... .+. +++++..|+......... ........+.+++.
T Consensus 70 ~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 145 (359)
T cd03808 70 LRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGV----PKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQ 145 (359)
T ss_pred HHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCC----CCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEc
Confidence 12233457999999997655443333322 222 446777776532211111 12233466777877
Q ss_pred ccccHHHHHHHHHhhhccc-CCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIK-MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~-~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~l 288 (396)
|....+.+.+ ....+ ..++.++++|+|.+.+.+.... .+++++.|+++|++.+.||++.+
T Consensus 146 s~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~G~~~~~k~~~~l 206 (359)
T cd03808 146 NEDDRDLALK----LGIIKKKKTVLIPGSGVDLDRFSPSPEP---------------IPEDDPVFLFVARLLKDKGIDEL 206 (359)
T ss_pred CHHHHHHHHH----hcCCCcCceEEecCCCCChhhcCccccc---------------cCCCCcEEEEEeccccccCHHHH
Confidence 7777666543 22222 4567888899998877543210 23577899999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHH-HHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN-YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~-~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~ 367 (396)
+++++.+.+ ++++++|+++|.+... ..... .+.+.+..++|+|+|+.+++.++|++||++++||.
T Consensus 207 i~~~~~l~~-------~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~-- 272 (359)
T cd03808 207 LEAARILKA-------KGPNVRLLLVGDGDEE-----NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSY-- 272 (359)
T ss_pred HHHHHHHHh-------cCCCeEEEEEcCCCcc-----hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCc--
Confidence 999998864 3489999999998632 22222 36667777899999999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
.|++|++++|||+||+|||+|+.+|...
T Consensus 273 ~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~ 300 (359)
T cd03808 273 REGLPRVLLEAMAMGRPVIATDVPGCRE 300 (359)
T ss_pred ccCcchHHHHHHHcCCCEEEecCCCchh
Confidence 8999999999999999999999998754
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=231.54 Aligned_cols=279 Identities=13% Similarity=0.136 Sum_probs=185.6
Q ss_pred ccEEEEEecc-CC-CCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhh--------------hhhhhhhhh-c---
Q 016053 74 SKLVLLVSHE-LS-LSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVI--------------YSLEHKMWD-R--- 132 (396)
Q Consensus 74 ~~kIl~v~~~-~~-~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~--------------~~~~~~~~~-~--- 132 (396)
+++|.+++.. ++ +.|...--.--|-+|.+. |++|+++.+--...+.... ..+.+++.+ .
T Consensus 322 ~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~ 401 (794)
T PLN02501 322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFK 401 (794)
T ss_pred CCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCC
Confidence 3679999876 33 377664444445667776 7999988842111111111 011122211 1
Q ss_pred -c--eEEEEc------------CchhhhhhccCCcEEEEcCchhhHHH--H--HHHhcCCCccccceeeeeeecccccCc
Q 016053 133 -G--VQVISA------------KGQETINTALKADLIVLNTAVAGKWL--D--AVLKEDVPRVLPNVLWWIHEMRGHYFK 193 (396)
Q Consensus 133 -~--~~~~~~------------~~~~~~~~~~~~DiV~~~~~~~~~~~--~--~~~~~~~~~~~~~vv~~~h~~~~~~~~ 193 (396)
. +.+++- .........++||+||+++|....+. . .+.+.+ +++..+|.....|..
T Consensus 402 ~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~------PVVasyHTny~eYl~ 475 (794)
T PLN02501 402 ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN------HVVGVVHTNYLEYIK 475 (794)
T ss_pred CCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC------CeEEEEeCCcHHHHh
Confidence 1 222221 22234455689999999998665444 2 233332 377788876533322
Q ss_pred hh----hh--------ccccc--cccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHH
Q 016053 194 LD----YV--------KHLPL--VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREH 259 (396)
Q Consensus 194 ~~----~~--------~~~~~--~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~ 259 (396)
.. .. +++.. ++.+++.|..+... ... .....||||.+.|.+... ..
T Consensus 476 ~y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~L-----------~~~-vI~nVnGVDte~F~P~~r--------~~ 535 (794)
T PLN02501 476 REKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDL-----------PKS-VICNVHGVNPKFLKIGEK--------VA 535 (794)
T ss_pred HhcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHHh-----------ccc-ceeecccccccccCCcch--------hH
Confidence 11 01 12222 46666666444321 111 222226999999876532 12
Q ss_pred HHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCC
Q 016053 260 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 339 (396)
Q Consensus 260 ~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~ 339 (396)
.++++|+......++|+||+.+.||++.+++|++.+.+ +.++++|+|+|+|+ .++++++++.++++
T Consensus 536 ~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~-------~~pnvrLvIVGDGP-----~reeLe~la~eLgL-- 601 (794)
T PLN02501 536 EERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKN-------ELDGFNLDVFGNGE-----DAHEVQRAAKRLDL-- 601 (794)
T ss_pred HHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHh-------hCCCeEEEEEcCCc-----cHHHHHHHHHHcCC--
Confidence 23567765555568999999999999999999998765 23789999999997 77889999998887
Q ss_pred cEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 340 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 340 ~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+|.|+|..+++.++|+.+||||+||. .|+||++++||||||+|||+++.||..
T Consensus 602 ~V~FLG~~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e 654 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNE 654 (794)
T ss_pred EEEecCCCCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCc
Confidence 49999999999999999999999999 999999999999999999999999864
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=230.17 Aligned_cols=285 Identities=17% Similarity=0.087 Sum_probs=195.9
Q ss_pred EEEEEeccCC---CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhh-h-hcceEEEE-----cCchhhh
Q 016053 76 LVLLVSHELS---LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKM-W-DRGVQVIS-----AKGQETI 145 (396)
Q Consensus 76 kIl~v~~~~~---~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-----~~~~~~~ 145 (396)
||++++.... .||+++++.+++++|.+.|++|++++.................. . ........ .......
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 5777877644 49999999999999999999999999543321111000000000 0 00000000 0011122
Q ss_pred hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccC----ch--------hhhccccccccceeecccc
Q 016053 146 NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF----KL--------DYVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~----~~--------~~~~~~~~~~~~~~~s~~~ 213 (396)
....++|+||++....... ... ..++++++|+...... .. .....+...+.+++.|...
T Consensus 81 ~~~~~~Dii~~~~~~~~~~----~~~-----~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~ 151 (365)
T cd03809 81 LLLLGLDLLHSPHNTAPLL----RLR-----GVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEAT 151 (365)
T ss_pred hhhcCCCeeeecccccCcc----cCC-----CCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHH
Confidence 2347899999998654432 122 2568888997632211 11 1223345777788887776
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
.+.+.+ .++.+..++.++|||+|...+..... .. +......++++.|+++|++.+.||++.+++++.
T Consensus 152 ~~~~~~----~~~~~~~~~~vi~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~ 218 (365)
T cd03809 152 KRDLLR----YLGVPPDKIVVIPLGVDPRFRPPPAE--------AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFA 218 (365)
T ss_pred HHHHHH----HhCcCHHHEEeeccccCccccCCCch--------HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHH
Confidence 666554 45556678999999999987754321 11 334445567889999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
++.+ ++++++|+++|.+... .....+..++.+..++|+++|+. +++.++|++||++++||. .|++
T Consensus 219 ~~~~-------~~~~~~l~i~G~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~ 285 (365)
T cd03809 219 RLPA-------KGPDPKLVIVGKRGWL----NEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSL--YEGF 285 (365)
T ss_pred HHHH-------hcCCCCEEEecCCccc----cHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccch--hccC
Confidence 9876 2357999999987532 22333333677888999999997 789999999999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|++++|||++|+|||+++.||...
T Consensus 286 ~~~~~Ea~a~G~pvI~~~~~~~~e 309 (365)
T cd03809 286 GLPVLEAMACGTPVIASNISSLPE 309 (365)
T ss_pred CCCHHHHhcCCCcEEecCCCCccc
Confidence 999999999999999999998653
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=224.35 Aligned_cols=278 Identities=19% Similarity=0.183 Sum_probs=185.9
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--hh-hhhh-hhcceEEE--EcCchhhhhh
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--SL-EHKM-WDRGVQVI--SAKGQETINT 147 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--~~-~~~~-~~~~~~~~--~~~~~~~~~~ 147 (396)
||+++++...+ ||++..+.+++++|.++||+|++++............ .+ .... ........ .........+
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLD 80 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHH
Confidence 58888866443 8889999999999999999999999554321100000 00 0000 00011110 1111223334
Q ss_pred ccCCcEEEEcCchhhHHH--HHHHhcCCCccccceeeeeeecccccCc------------hhhhccccccccceeecccc
Q 016053 148 ALKADLIVLNTAVAGKWL--DAVLKEDVPRVLPNVLWWIHEMRGHYFK------------LDYVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~--~~~~~~~~~~~~~~vv~~~h~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~ 213 (396)
..+||+||++.+....+. ..+.+.+ .+++.++|+....+.. .......+.++.+++.+...
T Consensus 81 ~~~pdii~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~ 155 (364)
T cd03814 81 AFAPDVVHIATPGPLGLAALRAARRLG-----IPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSL 155 (364)
T ss_pred hcCCCEEEEeccchhhHHHHHHHHHcC-----CCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHH
Confidence 679999999875432222 2223334 3467777764221110 01122334667777777766
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
.+.+. . ....++.+++||+|.+.+.+... ....+++++ .++.+.|+++|++.+.||++.++++++
T Consensus 156 ~~~~~-----~--~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~~i~~~~ 220 (364)
T cd03814 156 ADELR-----A--RGFRRVRLWPRGVDTELFHPRRR-------DEALRARLG-PPDRPVLLYVGRLAPEKNLEALLDADL 220 (364)
T ss_pred HHHHh-----c--cCCCceeecCCCccccccCcccc-------cHHHHHHhC-CCCCeEEEEEeccccccCHHHHHHHHH
Confidence 55322 1 23457899999999988764321 122345555 466789999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
++.+ + ++++|+++|.++ +.+.++ +..++|.|+|+. +++.++|+.||++++||. .|+|
T Consensus 221 ~l~~-------~-~~~~l~i~G~~~-----~~~~~~------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~ 279 (364)
T cd03814 221 PLRR-------R-PPVRLVIVGDGP-----ARARLE------ARYPNVHFLGFLDGEELAAAYASADVFVFPSR--TETF 279 (364)
T ss_pred Hhhh-------c-CCceEEEEeCCc-----hHHHHh------ccCCcEEEEeccCHHHHHHHHHhCCEEEECcc--cccC
Confidence 8864 3 589999999885 444443 445789999964 789999999999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++++||||||+|||+++.+|..
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~ 302 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPA 302 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCch
Confidence 99999999999999999999865
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-27 Score=219.90 Aligned_cols=288 Identities=22% Similarity=0.178 Sum_probs=204.3
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEE--------cCchhhh
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--------AKGQETI 145 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 145 (396)
||+++++.... ||+..++.+++++|.+.||+|.+++........................... ......+
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRL 80 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHH
Confidence 58888876443 7888999999999999999999999554322111100000000000000000 0011233
Q ss_pred hhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeecccccCc-----------hhhhccccccccceeecccc
Q 016053 146 NTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFK-----------LDYVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~-----------~~~~~~~~~~~~~~~~s~~~ 213 (396)
....++|+||++......... .....+ .++++++|+....... ......+...+.+++.+...
T Consensus 81 ~~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~ 155 (374)
T cd03801 81 LRRERFDVVHAHDWLALLAAALAARLLG-----IPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEAT 155 (374)
T ss_pred hhhcCCcEEEEechhHHHHHHHHHHhcC-----CcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHH
Confidence 345789999999976544332 222223 4578888886432211 11223345778888888777
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
.+.+.+ .++....++.++|||+|...+.+.. ...+.......+.+.|+++|++.+.||++.+++++.
T Consensus 156 ~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 156 REELRE----LGGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred HHHHHh----cCCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 766554 3444446899999999988775421 223444555677899999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
.+.+ ++++++|+++|++. ..+.+++.+++++..++|.+.|.+ +++.++|+.||++++|+. .|++
T Consensus 223 ~~~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~ 288 (374)
T cd03801 223 KLRK-------EYPDVRLVIVGDGP-----LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSL--YEGF 288 (374)
T ss_pred HHhh-------hcCCeEEEEEeCcH-----HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecch--hccc
Confidence 8865 23789999999775 778888888888999999999997 899999999999999999 8999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|++++|||++|+|||+++.+|.+.
T Consensus 289 ~~~~~Ea~~~g~pvI~~~~~~~~~ 312 (374)
T cd03801 289 GLVLLEAMAAGLPVVASDVGGIPE 312 (374)
T ss_pred cchHHHHHHcCCcEEEeCCCChhH
Confidence 999999999999999999988654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=225.05 Aligned_cols=277 Identities=15% Similarity=0.134 Sum_probs=179.4
Q ss_pred EEEEeccCCC---CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC-------------
Q 016053 77 VLLVSHELSL---SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------- 140 (396)
Q Consensus 77 Il~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 140 (396)
||++++..+. +|+...+++++++|.+. |+|++++......+......+..... .+.+++..
T Consensus 1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~l~ 77 (397)
T TIGR03087 1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCE--EVCVVPLDPRVARLRSLLGLL 77 (397)
T ss_pred CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhh--eeEEeecCcHHHHHHHHhhhc
Confidence 6888876433 77789999999999876 99999995432221111111211111 22221110
Q ss_pred -----------c------hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc---------Cch
Q 016053 141 -----------G------QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY---------FKL 194 (396)
Q Consensus 141 -----------~------~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~---------~~~ 194 (396)
. .+.+....++|+||+++.....++.. ...+ .+.++..|+..... ...
T Consensus 78 ~~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~~~-~~~~-----~p~i~~~~d~~~~~~~~~~~~~~~~~ 151 (397)
T TIGR03087 78 TGEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYVTP-HVRG-----VPRIVDFVDVDSDKWLQYARTKRWPL 151 (397)
T ss_pred CCCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceeccc-cccC-----CCeEeehhhHHHHHHHHHHhccCcch
Confidence 0 01222347999999998644433221 1122 34566677642110 000
Q ss_pred h--h-----------hccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHH
Q 016053 195 D--Y-----------VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVR 261 (396)
Q Consensus 195 ~--~-----------~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r 261 (396)
. + ...++.++.+++.|....+.+.+ ..+....++.+||||+|.+.|.+....
T Consensus 152 ~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~----~~~~~~~~v~vipngvd~~~f~~~~~~----------- 216 (397)
T TIGR03087 152 RWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRR----LAPEAAGRITAFPNGVDADFFSPDRDY----------- 216 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHH----hCCCCCCCeEEeecccchhhcCCCccc-----------
Confidence 0 0 11235677788887776665543 233455689999999999988643210
Q ss_pred HHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 262 ESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 262 ~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
.-..++++.+|+|+|++.+.||++.+++++..+...+.+ +.|+++|+|+|+|+ . +++ ++++..++|
T Consensus 217 -~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~---~~p~~~l~ivG~g~-----~-~~~----~~l~~~~~V 282 (397)
T TIGR03087 217 -PNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA---RRPAAEFYIVGAKP-----S-PAV----RALAALPGV 282 (397)
T ss_pred -cCCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH---HCCCcEEEEECCCC-----h-HHH----HHhccCCCe
Confidence 011234567899999999999999999666544333332 34899999999986 2 223 333445789
Q ss_pred EEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 342 HFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 342 ~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+|+|+++++..+|++||++|+||. +.||+|++++||||||+|||+|+.++
T Consensus 283 ~~~G~v~~~~~~~~~adv~v~Ps~-~~eG~~~~~lEAma~G~PVV~t~~~~ 332 (397)
T TIGR03087 283 TVTGSVADVRPYLAHAAVAVAPLR-IARGIQNKVLEAMAMAKPVVASPEAA 332 (397)
T ss_pred EEeeecCCHHHHHHhCCEEEeccc-ccCCcccHHHHHHHcCCCEEecCccc
Confidence 999999999999999999999997 26999999999999999999999754
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=232.07 Aligned_cols=232 Identities=16% Similarity=0.162 Sum_probs=152.7
Q ss_pred cCCcEEEEcCchhhHHHHHH-HhcCCCccccceeeeeeecccccC----------chhh---------hcccccccccee
Q 016053 149 LKADLIVLNTAVAGKWLDAV-LKEDVPRVLPNVLWWIHEMRGHYF----------KLDY---------VKHLPLVAGAMI 208 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~~h~~~~~~~----------~~~~---------~~~~~~~~~~~~ 208 (396)
.+||+||+|.+.++.....+ .+.++| .+.+.|......+ ...+ ...+..++.+++
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~lgVP-----~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKLGVT-----QCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHhCCC-----EEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 46999999998776654433 345654 7778885421100 0000 112234555555
Q ss_pred eccccHHHHHHHH---Hh------------hhcc--cCCCEEEEecCCccchhhhhhhhHHHH-----------HhHHHH
Q 016053 209 DSHVTAEYWKNRT---RE------------RLRI--KMPDTYVVHLGNSKELMEVAEDNVAKR-----------VLREHV 260 (396)
Q Consensus 209 ~s~~~~~~~~~~~---~~------------~~g~--~~~k~~vI~ngid~~~~~~~~~~~~~~-----------~~~~~~ 260 (396)
.+..-...+.+++ .. ..|+ ..+|+.+|++|+|...|.|......+. -+..+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 5433221111000 00 0133 256899999999999886532111000 011223
Q ss_pred HHHcCC--CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc----cch---HHHHHHHH
Q 016053 261 RESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----QTK---FESELRNY 331 (396)
Q Consensus 261 r~~~g~--~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~----~~~---~~~~l~~~ 331 (396)
++.+|+ ++++++|+++||+.+.||++.+++|++++.+. .++++|+|+|++.+. +.+ ..+++.++
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l-------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~L 634 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL-------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSL 634 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHh-------CCCcEEEEEECCccccccccHHHHHHHHHHHHH
Confidence 456775 45677999999999999999999999987542 268999999987311 111 12457889
Q ss_pred HHhcCCCCcEEEecCc------CCHHHHHH-HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 332 VMQKKIQDRVHFVNKT------LTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 332 ~~~~~l~~~V~~~g~~------~~~~~~~~-~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++.++|.|+|.+ .++..+++ ++|+||+||. +|+||++++||||||+|||+|+.||++
T Consensus 635 a~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 635 IEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 9999999999999964 23555555 4799999999 999999999999999999999999975
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=218.74 Aligned_cols=279 Identities=11% Similarity=0.034 Sum_probs=184.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch----------h-
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ----------E- 143 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~- 143 (396)
++.++. ....|++..+..++..|.++| ++|++++...... ..+.....+++++..... +
T Consensus 6 ~~~~~~--~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~-------~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~ 76 (371)
T PLN02275 6 RAAVVV--LGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEP-------IPALLNHPSIHIHLMVQPRLLQRLPRVLYA 76 (371)
T ss_pred EEEEEE--ecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCC-------CHHHhcCCcEEEEECCCcccccccccchHH
Confidence 455554 244677888888888888877 5899998543321 222233345666544210 0
Q ss_pred -----h------------hhhccCCcEEEEcCchhhH--HHH-H-HHhcCCCccccceeeeeeecccccC------ch--
Q 016053 144 -----T------------INTALKADLIVLNTAVAGK--WLD-A-VLKEDVPRVLPNVLWWIHEMRGHYF------KL-- 194 (396)
Q Consensus 144 -----~------------~~~~~~~DiV~~~~~~~~~--~~~-~-~~~~~~~~~~~~vv~~~h~~~~~~~------~~-- 194 (396)
. ..+..+||+||+|++.... ... . ++..+ .|++.+.|+...... ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~-----~p~v~~~h~~~~~~~~~~~~~~~~~ 151 (371)
T PLN02275 77 LALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRR-----AKFVIDWHNFGYTLLALSLGRSHPL 151 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhC-----CCEEEEcCCccHHHHhcccCCCCHH
Confidence 0 1234799999999754321 111 1 12223 346777786521100 00
Q ss_pred -h-----hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC
Q 016053 195 -D-----YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 268 (396)
Q Consensus 195 -~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~ 268 (396)
. ....++.++.+++.|....+.+.+ .+|++ +.+||||. .+.|.+.... ..+. .+
T Consensus 152 ~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~----~~g~~---i~vi~n~~-~~~f~~~~~~-----------~~~~-~~ 211 (371)
T PLN02275 152 VRLYRWYERHYGKMADGHLCVTKAMQHELDQ----NWGIR---ATVLYDQP-PEFFRPASLE-----------IRLR-PN 211 (371)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHH----hcCCC---eEEECCCC-HHHcCcCCch-----------hccc-CC
Confidence 0 112345678888888887776643 34543 88999994 4555433210 1111 13
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhc----------cCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK----------LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ 338 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~----------~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~ 338 (396)
+..+++++|++.+.||++.+++|+..+..++..-+ .++++++|+|+|+|+ .++++++++++++++
T Consensus 212 ~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~ 286 (371)
T PLN02275 212 RPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-----QKAMYEEKISRLNLR 286 (371)
T ss_pred CcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-----CHHHHHHHHHHcCCC
Confidence 45678899999999999999999998754321100 023789999999997 788999999999997
Q ss_pred CcEEEec-C--cCCHHHHHHHcCEEEecCC-CCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 339 DRVHFVN-K--TLTVAPYLAAIDVLVQNSQ-AWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 339 ~~V~~~g-~--~~~~~~~~~~aDv~v~pS~-~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+ ++|.+ + .++++++|++||++|+|+. .+.|++|++++||||||+|||+++.||.+
T Consensus 287 ~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 287 H-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred c-eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 6 88866 3 3899999999999998642 12589999999999999999999999865
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=219.65 Aligned_cols=287 Identities=18% Similarity=0.128 Sum_probs=196.4
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-----------
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ----------- 142 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 142 (396)
|||++++.... ||++.++.+++++|.++||+|++++............. .......++.+......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG-YKREEVDGVRVHRVPLPPYKKNGLLKRL 79 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc-ceEEecCCeEEEEEecCCCCccchHHHH
Confidence 58999987555 88899999999999999999999995433211110000 00011223333221100
Q ss_pred -----------hhhh-hccCCcEEEEcCchhh-HHHHHHHhcCCCccccceeeeeeecccccC------c-h----h---
Q 016053 143 -----------ETIN-TALKADLIVLNTAVAG-KWLDAVLKEDVPRVLPNVLWWIHEMRGHYF------K-L----D--- 195 (396)
Q Consensus 143 -----------~~~~-~~~~~DiV~~~~~~~~-~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~------~-~----~--- 195 (396)
.... ...+||+||++.+... .......+... ..++++++|+...... . . .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T cd03794 80 LNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLK---GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLR 156 (394)
T ss_pred HhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhc---CCCEEEEehhhcchhHHHccCccccchHHHHHH
Confidence 0111 3678999999983222 22222122111 2457888887532110 0 0 0
Q ss_pred --hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEE
Q 016053 196 --YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF 273 (396)
Q Consensus 196 --~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~i 273 (396)
....+...+.+++.+....+.+. ..+.+..++.++|||+|...+.+.... .. +.......+.+.|
T Consensus 157 ~~~~~~~~~~d~vi~~s~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i 223 (394)
T cd03794 157 KLERLIYRRADAIVVISPGMREYLV-----RRGVPPEKISVIPNGVDLELFKPPPAD-------ES-LRKELGLDDKFVV 223 (394)
T ss_pred HHHHHHHhcCCEEEEECHHHHHHHH-----hcCCCcCceEEcCCCCCHHHcCCccch-------hh-hhhccCCCCcEEE
Confidence 11234567777877777666544 346677889999999998877543211 11 3445556788999
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHH
Q 016053 274 AIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVA 351 (396)
Q Consensus 274 l~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~ 351 (396)
+++|++.+.||++.+++++.++.+ . ++++|+++|++. ..+.+++.+...++ ++|.++|.. +++.
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~-------~-~~~~l~i~G~~~-----~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~ 289 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKD-------R-PDIRFLIVGDGP-----EKEELKELAKALGL-DNVTFLGRVPKEELP 289 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhh-------c-CCeEEEEeCCcc-----cHHHHHHHHHHcCC-CcEEEeCCCChHHHH
Confidence 999999999999999999998864 2 589999999986 56777777666666 579999976 6899
Q ss_pred HHHHHcCEEEecCCCCCCCc-----cHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 352 PYLAAIDVLVQNSQAWGECF-----GRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 352 ~~~~~aDv~v~pS~~~~E~f-----g~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
++|++||++++||. .|++ |++++|||+||+|||+++.+|...
T Consensus 290 ~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 290 ELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred HHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 99999999999999 7765 888999999999999999998754
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=231.73 Aligned_cols=211 Identities=20% Similarity=0.178 Sum_probs=161.8
Q ss_pred cCCcEEEEcCchhhHHHHH--HHhcCCCccccceeeeeeecccc--------------cCchhhh--------ccccccc
Q 016053 149 LKADLIVLNTAVAGKWLDA--VLKEDVPRVLPNVLWWIHEMRGH--------------YFKLDYV--------KHLPLVA 204 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~--~~~~~~~~~~~~vv~~~h~~~~~--------------~~~~~~~--------~~~~~~~ 204 (396)
.++|++|+|+.....++.. ....+ .|++++.|+.... .++..+. ..++.++
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~-----~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad 246 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRG-----TPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAAD 246 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhC-----CCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5889999997532222222 22334 4588888874210 0011111 1235677
Q ss_pred cceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCC
Q 016053 205 GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKG 284 (396)
Q Consensus 205 ~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg 284 (396)
.+++.|....+... .+|.+++|+.+||||+|.+.|.+.... ...++.++|+++||+.+.||
T Consensus 247 ~Ii~~s~~~~~~~~-----~~g~~~~ki~vIpNgid~~~f~~~~~~--------------~~~~~~~~i~~vGrl~~~Kg 307 (475)
T cd03813 247 RITTLYEGNRERQI-----EDGADPEKIRVIPNGIDPERFAPARRA--------------RPEKEPPVVGLIGRVVPIKD 307 (475)
T ss_pred EEEecCHHHHHHHH-----HcCCCHHHeEEeCCCcCHHHcCCcccc--------------ccCCCCcEEEEEeccccccC
Confidence 78877776654432 567888899999999999888653210 12357789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecC
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS 364 (396)
++.+++|++.+.+. .++++|+|+|+++ .++++.++++++++++++.++|+|+| .+++.++|+++|++|+||
T Consensus 308 ~~~li~a~~~l~~~-------~p~~~l~IvG~g~-~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS 378 (475)
T cd03813 308 IKTFIRAAAIVRKK-------IPDAEGWVIGPTD-EDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTS 378 (475)
T ss_pred HHHHHHHHHHHHHh-------CCCeEEEEECCCC-cChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCc
Confidence 99999999998763 3899999999885 33457889999999999999999999 779999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 365 QAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 365 ~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
. .|+||++++||||||+|||+|+.||.+
T Consensus 379 ~--~Eg~p~~vlEAma~G~PVVatd~g~~~ 406 (475)
T cd03813 379 I--SEGQPLVILEAMAAGIPVVATDVGSCR 406 (475)
T ss_pred h--hhcCChHHHHHHHcCCCEEECCCCChH
Confidence 9 999999999999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=217.15 Aligned_cols=287 Identities=22% Similarity=0.259 Sum_probs=201.9
Q ss_pred EEEEeccCCC---CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhh-------hhhhhhcceEE-------EEc
Q 016053 77 VLLVSHELSL---SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL-------EHKMWDRGVQV-------ISA 139 (396)
Q Consensus 77 Il~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~-------~~~~~~~~~~~-------~~~ 139 (396)
||++++..+. ||++.++.+++++|.+.||+|++++.............. ........... ...
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA 80 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence 5777776554 888999999999999999999999954332211110000 00000000000 000
Q ss_pred Cchhhhhh--ccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch------hhhccccccccceeecc
Q 016053 140 KGQETINT--ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHLPLVAGAMIDSH 211 (396)
Q Consensus 140 ~~~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~ 211 (396)
.....+.. ..++|+||++......++........ ..+++++.|+........ .....+..++.+++.|.
T Consensus 81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKL---GIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhc---CCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCH
Confidence 11123334 68999999997654443333222211 145788888764322211 12344567788888887
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHH
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a 291 (396)
...+.+.+ .+....++.+++||+|.+.+.+.... .. +.++...+.+.++++|++.+.||++.++++
T Consensus 158 ~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~i~~~g~~~~~k~~~~li~~ 223 (377)
T cd03798 158 ALADELKA-----LGIDPEKVTVIPNGVDTERFSPADRA--------EA-RKLGLPEDKKVILFVGRLVPRKGIDYLIEA 223 (377)
T ss_pred HHHHHHHH-----hcCCCCceEEcCCCcCcccCCCcchH--------HH-HhccCCCCceEEEEeccCccccCHHHHHHH
Confidence 77766553 22567789999999999887654211 01 445556788999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCC
Q 016053 292 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE 369 (396)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E 369 (396)
++.+.+ ++++++|+++|.+. ..+.+++.+++.++.++|.+.|+. +++.++|+.||++++||. .|
T Consensus 224 ~~~~~~-------~~~~~~l~i~g~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~ 289 (377)
T cd03798 224 LARLLK-------KRPDVHLVIVGDGP-----LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSL--RE 289 (377)
T ss_pred HHHHHh-------cCCCeEEEEEcCCc-----chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchh--hc
Confidence 998865 34799999999886 567788888888998999999997 679999999999999999 89
Q ss_pred CccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 370 CFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 370 ~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++|++++|||++|+|||+++.+|..
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~~~ 314 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGGIP 314 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCChH
Confidence 9999999999999999999998854
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=220.24 Aligned_cols=208 Identities=14% Similarity=0.182 Sum_probs=156.0
Q ss_pred ccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecc--cccCch--h-h-------hccccccccceeeccccHH
Q 016053 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR--GHYFKL--D-Y-------VKHLPLVAGAMIDSHVTAE 215 (396)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~--~~~~~~--~-~-------~~~~~~~~~~~~~s~~~~~ 215 (396)
..++|++|++.+....+........ .+.+.++|..+ ...... . + ......++.+++.|....+
T Consensus 209 ~~~~di~i~dr~~~~~~~~~~~~~~-----~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~ 283 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQAVLENKGP-----AKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQ 283 (500)
T ss_pred CCCCCEEEEcCCcccchHHHhcCCC-----ceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHH
Confidence 4688999998765433221111111 45667788643 111110 0 1 1234567888888888777
Q ss_pred HHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHH
Q 016053 216 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES 295 (396)
Q Consensus 216 ~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l 295 (396)
.+.+++. .++...+++.+||||++...+.+.. ..+...|+++||+.+.||++.+++|+.++
T Consensus 284 ~l~~~~~-~~~~~~~ki~viP~g~~~~~~~~~~------------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l 344 (500)
T TIGR02918 284 ILKNQFK-KYYNIEPRIYTIPVGSLDELQYPEQ------------------ERKPFSIITASRLAKEKHIDWLVKAVVKA 344 (500)
T ss_pred HHHHHhh-hhcCCCCcEEEEcCCCcccccCccc------------------ccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence 7776544 2334457899999998754432110 13457899999999999999999999998
Q ss_pred HHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHH
Q 016053 296 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT 375 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~ 375 (396)
.+ +.|+++|+|+|+|+ ..+.++++++++++.++|+|+|+. ++.++|+.||++|+||. .||||+++
T Consensus 345 ~~-------~~p~~~l~i~G~G~-----~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~--~Egfgl~~ 409 (500)
T TIGR02918 345 KK-------SVPELTFDIYGEGG-----EKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSAST--SEGFGLTL 409 (500)
T ss_pred Hh-------hCCCeEEEEEECch-----hHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCc--cccccHHH
Confidence 75 34899999999986 678899999999999999999976 79999999999999999 99999999
Q ss_pred HHHHhcCCCEEEcCCC-CCC
Q 016053 376 IEAMAFQLPVLVLSEL-HPS 394 (396)
Q Consensus 376 lEAma~G~PVI~t~~g-G~~ 394 (396)
+||||||+|||+|+++ |++
T Consensus 410 lEAma~G~PVI~~dv~~G~~ 429 (500)
T TIGR02918 410 MEAVGSGLGMIGFDVNYGNP 429 (500)
T ss_pred HHHHHhCCCEEEecCCCCCH
Confidence 9999999999999986 664
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=202.72 Aligned_cols=212 Identities=17% Similarity=0.110 Sum_probs=156.5
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccc--cCc----hhhhccccccccceeeccccHHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH--YFK----LDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~--~~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.++|++|++............+.... .++++.+.|+..-. ... ......+..++.++++|....+++.+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~--~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~--- 200 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYL--RKRVISRAHGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK--- 200 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcC--CceEEEEeccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH---
Confidence 45677777653332222222222211 13578889965311 111 11223356788899999888877654
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
.++...+++.+++||++.+.+... ...++.+.|+++|++.+.||++.+++|+.++.+..++
T Consensus 201 -~~~~~~~ki~vi~~gv~~~~~~~~-----------------~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~- 261 (407)
T cd04946 201 -RYPAYKEKIKVSYLGVSDPGIISK-----------------PSKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPS- 261 (407)
T ss_pred -HCCCccccEEEEECCcccccccCC-----------------CCCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCC-
Confidence 566677889999999988765321 1135678999999999999999999999998763211
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHH--cCEEEecCCCCCCCccHHHHHH
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA--IDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEA 378 (396)
.+++++++|+|+ ..+.+++++++.+..++|+|+|++ +++.++|+. +|++++||. .||+|++++||
T Consensus 262 ----~~l~~~iiG~g~-----~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEA 330 (407)
T cd04946 262 ----IKIKWTHIGGGP-----LEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEA 330 (407)
T ss_pred ----ceEEEEEEeCch-----HHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHH
Confidence 267888999986 778899999888888899999997 478899976 789999999 99999999999
Q ss_pred HhcCCCEEEcCCCCCCC
Q 016053 379 MAFQLPVLVLSELHPSI 395 (396)
Q Consensus 379 ma~G~PVI~t~~gG~~~ 395 (396)
||||+|||+|++||..+
T Consensus 331 ma~G~PVIas~vgg~~e 347 (407)
T cd04946 331 MSFGIPVIATNVGGTPE 347 (407)
T ss_pred HHcCCCEEeCCCCCcHH
Confidence 99999999999999753
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=206.85 Aligned_cols=260 Identities=18% Similarity=0.144 Sum_probs=166.0
Q ss_pred EEEEEeccCC-CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhh-----hhhhhhhh--hcceE-EEEc-Cchhhh
Q 016053 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVI-----YSLEHKMW--DRGVQ-VISA-KGQETI 145 (396)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-----~~~~~~~~--~~~~~-~~~~-~~~~~~ 145 (396)
||+++++... .||+|+.+.++++.|.+. +|............... ........ ..... +... ......
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDA--DIFTLVDDPDKLPRLLRLKKIRTSFIQKLPFARRRYRKYLPLMPLAIEQ 78 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCC--CEEEEeecCCccchhhcCCceeechhhhchhhHhhHhhhCchhhHHHHh
Confidence 5888887755 599999999999998763 33332222111100000 00000000 00000 0000 001112
Q ss_pred hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccc-------c------Cch-------h-----hhccc
Q 016053 146 NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH-------Y------FKL-------D-----YVKHL 200 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~-------~------~~~-------~-----~~~~~ 200 (396)
....++|+|++++......+. .... .+.++++|..... + ... . ..+.+
T Consensus 79 ~~~~~~D~v~~~~~~~~~~~~--~~~~-----~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (351)
T cd03804 79 FDLSGYDLVISSSHAVAKGVI--TRPD-----QLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSA 151 (351)
T ss_pred ccccCCCEEEEcCcHHhcccc--CCCC-----CcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHh
Confidence 234789999988753332211 1112 3455566642100 0 000 0 01223
Q ss_pred cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc
Q 016053 201 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 280 (396)
Q Consensus 201 ~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~ 280 (396)
+.++.+++.|..+.+.+.+ .++ .+..+|+||+|.+.|.+.. ..+..++++|++.
T Consensus 152 ~~~d~ii~~S~~~~~~~~~----~~~---~~~~vi~~~~d~~~~~~~~-------------------~~~~~il~~G~~~ 205 (351)
T cd03804 152 ARVDYFIANSRFVARRIKK----YYG---RDATVIYPPVDTDRFTPAE-------------------EKEDYYLSVGRLV 205 (351)
T ss_pred cCCCEEEECCHHHHHHHHH----HhC---CCcEEECCCCCHhhcCcCC-------------------CCCCEEEEEEcCc
Confidence 6778888888888877654 233 2468999999988775321 2344688999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcC
Q 016053 281 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAID 358 (396)
Q Consensus 281 ~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aD 358 (396)
+.||++.+++|++.+ + ++|+|+|+|+ ..+++++ +..++|+|+|++ +++.++|++||
T Consensus 206 ~~K~~~~li~a~~~~-----------~-~~l~ivG~g~-----~~~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ad 263 (351)
T cd03804 206 PYKRIDLAIEAFNKL-----------G-KRLVVIGDGP-----ELDRLRA-----KAGPNVTFLGRVSDEELRDLYARAR 263 (351)
T ss_pred cccChHHHHHHHHHC-----------C-CcEEEEECCh-----hHHHHHh-----hcCCCEEEecCCCHHHHHHHHHhCC
Confidence 999999999999864 4 8999999986 4455554 445899999997 45999999999
Q ss_pred EEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 359 VLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 359 v~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
++++||. |+||++++||||||+|||+++.||..+
T Consensus 264 ~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e 297 (351)
T cd03804 264 AFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALE 297 (351)
T ss_pred EEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcc
Confidence 9999986 999999999999999999999998764
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-23 Score=190.37 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=163.1
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCchhhHHHH
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLD 166 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~ 166 (396)
+....+..++++-|+..|--|+++++.-. +.+ .+.-+-+++ .|-|....++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~-----------------~~~~~~~~~~~ 62 (335)
T PHA01633 11 SSISNVSEDIAEVLRENGEIVTITKNPFY---------IPK--AEKLIVFIP-----------------FHPPSLNPYLY 62 (335)
T ss_pred hhhhhHHHHHHHHHHhCCcEEEEecCCcc---------cCc--cceEEEEee-----------------cCCcccchHHh
Confidence 44557889999999999988888874421 110 010111111 11122222222
Q ss_pred H-HHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhh
Q 016053 167 A-VLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELME 245 (396)
Q Consensus 167 ~-~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~ 245 (396)
. ....+- .+.+.++|.... ...+.+.+.+-+.++++|..+.+.+.+ .|++.. .+|+||+|.+.|.
T Consensus 63 ~~~~~~~~----~~~~tt~~g~~~---~~~y~~~m~~~~~vIavS~~t~~~L~~-----~G~~~~--i~I~~GVD~~~f~ 128 (335)
T PHA01633 63 AYYQFKGK----KYFYTTCDGIPN---IEIVNKYLLQDVKFIPNSKFSAENLQE-----VGLQVD--LPVFHGINFKIVE 128 (335)
T ss_pred hhhhhcCC----CceEEeeCCcCc---hHHHHHHHhcCCEEEeCCHHHHHHHHH-----hCCCCc--eeeeCCCChhhcC
Confidence 1 111111 346667776532 244556666667888889888877653 366544 3588999999887
Q ss_pred hhhhhHHHHHhHHHHHHHcCCC-CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchH
Q 016053 246 VAEDNVAKRVLREHVRESLGVR-NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKF 324 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~r~~~g~~-~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 324 (396)
+... ...++|++++.. ++.++|+++||+.++||++.+++|++++.+..++. ..+++++++|.+
T Consensus 129 p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~---~~~i~l~ivG~~------- 192 (335)
T PHA01633 129 NAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDI---AKKIHFFVISHK------- 192 (335)
T ss_pred ccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCc---cccEEEEEEcHH-------
Confidence 5421 123466666653 57789999999999999999999999987633110 014688888742
Q ss_pred HHHHHHHHHhcCCCCcEEEec---C--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 325 ESELRNYVMQKKIQDRVHFVN---K--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 325 ~~~l~~~~~~~~l~~~V~~~g---~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
..++++++++|+|+| . .+++.++|++||++|+||. .|+||++++||||||+|||+++.||..
T Consensus 193 ------~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~ 259 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLD 259 (335)
T ss_pred ------HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCce
Confidence 124567788999995 3 3689999999999999999 999999999999999999999998754
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=193.65 Aligned_cols=230 Identities=18% Similarity=0.176 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCchhhHHHHHHHh
Q 016053 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLK 170 (396)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~ 170 (396)
++-.-+.++|+..|++|+++--.. +... .+.. +.+..+.|+.....+ .-
T Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~----------~~~~---------------~~~~--~~~~~~~~~~~~~~~----~~ 62 (331)
T PHA01630 14 RQKKLLEEHLKMLGHKVTVFEKPT----------LTKY---------------QLPP--GYPIYIYYTIFNSML----FW 62 (331)
T ss_pred HHHHHHHHHHHHhCCeeEEEeccc----------hhhh---------------hcCC--CCceeeehhhhhHHH----HH
Confidence 455666788999999999885211 1110 1111 334444554332221 11
Q ss_pred cCCCccccceeeeeeecccccCchhhhccc--cccccceeeccccHHHHHHHHHhhhccc-CCCEEEEecCCccchhhhh
Q 016053 171 EDVPRVLPNVLWWIHEMRGHYFKLDYVKHL--PLVAGAMIDSHVTAEYWKNRTRERLRIK-MPDTYVVHLGNSKELMEVA 247 (396)
Q Consensus 171 ~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~g~~-~~k~~vI~ngid~~~~~~~ 247 (396)
.+++..+.++++.+|+. ......+..+. ..++.+++.|..+.+.+.+ .+++ ++++.+||||+|.+.|.+.
T Consensus 63 ~~~~~~~~~~v~e~~~~--~~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~-----~g~~~~~~i~vIpNGVd~~~f~~~ 135 (331)
T PHA01630 63 KGIPHVGKNIVFEVADT--DAISHTALYFFRNQPVDEIVVPSQWSKNAFYT-----SGLKIPQPIYVIPHNLNPRMFEYK 135 (331)
T ss_pred hhccccCCceEEEEEee--chhhHHHHHHHhhccCCEEEECCHHHHHHHHH-----cCCCCCCCEEEECCCCCHHHcCCC
Confidence 23444456788888874 23344444444 5789999999988877653 3444 4679999999999887543
Q ss_pred hhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHH
Q 016053 248 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE 327 (396)
Q Consensus 248 ~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 327 (396)
.. -..+.++++++|++.++||++.+++|++++.+ +.++++++++|++. ....
T Consensus 136 ~~----------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~-------~~~~~~llivG~~~-----~~~~ 187 (331)
T PHA01630 136 PK----------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQN-------EGYDFYFLIKSSNM-----LDPR 187 (331)
T ss_pred cc----------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHh-------hCCCEEEEEEeCcc-----cchh
Confidence 11 01345677788899999999999999998865 33799999999764 1121
Q ss_pred HHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 328 LRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 328 l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+. ++.+ +......+++.++|+.||++|+||. .|+||++++||||||+|||+|+.||.++
T Consensus 188 l~------~~~~-~~~~v~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E 246 (331)
T PHA01630 188 LF------GLNG-VKTPLPDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSE 246 (331)
T ss_pred hc------cccc-eeccCCHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchh
Confidence 11 2222 1111223799999999999999999 9999999999999999999999999764
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=199.01 Aligned_cols=206 Identities=18% Similarity=0.215 Sum_probs=154.5
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccC--------ch---hhhccccccccceeeccccHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF--------KL---DYVKHLPLVAGAMIDSHVTAEYW 217 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~--------~~---~~~~~~~~~~~~~~~s~~~~~~~ 217 (396)
.++|+++++.+....+........ .+.+.++|+.+.... .. .....+...+.+++.|....+.+
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l 172 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKA-----AKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDL 172 (372)
T ss_pred CCCCEEEECCccccchhHHhccCC-----ceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHH
Confidence 789999999876544411111111 235667776431111 10 11123456777888887777666
Q ss_pred HHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHH
Q 016053 218 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE 297 (396)
Q Consensus 218 ~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~ 297 (396)
.+ .++.. .++.+||||++.+.+.+.. ....++..++++||+.+.||++.+++|+.++.+
T Consensus 173 ~~----~~~~~-~~v~~ip~g~~~~~~~~~~----------------~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~ 231 (372)
T cd04949 173 QK----QFGNY-NPIYTIPVGSIDPLKLPAQ----------------FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVK 231 (372)
T ss_pred HH----HhCCC-CceEEEcccccChhhcccc----------------hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHH
Confidence 54 33332 3489999999987664321 012456789999999999999999999999876
Q ss_pred HHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHH
Q 016053 298 LIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIE 377 (396)
Q Consensus 298 ~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lE 377 (396)
++|+++|+|+|.|. ....+++.+++++++++|+|.|+.+++.++|+.||++|+||. .|+||++++|
T Consensus 232 -------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~--~Eg~~~~~lE 297 (372)
T cd04949 232 -------QVPDATLDIYGYGD-----EEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQ--SEGFGLSLME 297 (372)
T ss_pred -------hCCCcEEEEEEeCc-----hHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEeccc--ccccChHHHH
Confidence 34899999999986 567788888899999999999998999999999999999999 9999999999
Q ss_pred HHhcCCCEEEcCCC-CCC
Q 016053 378 AMAFQLPVLVLSEL-HPS 394 (396)
Q Consensus 378 Ama~G~PVI~t~~g-G~~ 394 (396)
||+||+|||+++.+ |++
T Consensus 298 Ama~G~PvI~~~~~~g~~ 315 (372)
T cd04949 298 ALSHGLPVISYDVNYGPS 315 (372)
T ss_pred HHhCCCCEEEecCCCCcH
Confidence 99999999999987 654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-24 Score=198.53 Aligned_cols=381 Identities=23% Similarity=0.154 Sum_probs=256.8
Q ss_pred CCCcCCCcccccccchHHHHHHHHHHHHHHHHHHHhhccCCCCC-CccccccccccccCCCcccCCCCCcccccccEEEE
Q 016053 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDR-HLEVSDKKRVQSQSVPRIATKSSPLSFMKSKLVLL 79 (396)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~kIl~ 79 (396)
|.+.+-+-|-+.++.+|..+.....+++|...-.....+.+|+. .--.+++......-.-+...... ++.+....+.+
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s~~~~lg-~~d~G~qV~~l 79 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLSGQDVLG-LPDTGGQVVYL 79 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHhcccccC-CCCCCceEEEE
Confidence 55656577888999999999888888888877777778888777 22222222110000000011112 44444456666
Q ss_pred EeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCc
Q 016053 80 VSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTA 159 (396)
Q Consensus 80 v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~ 159 (396)
+++....+ ++...+..+..|.-. .++.+++..-|.... ..+.......++.++.......+...++.|.+++...
T Consensus 80 ~~h~~al~-~~~~~~~~~~~l~~~-~~i~vv~~~lP~~~~---~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~ 154 (495)
T KOG0853|consen 80 TSHEDALE-MPLLLRCFAETLDGT-PPILVVGDWLPRAMG---QFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFV 154 (495)
T ss_pred ehhhhhhc-chHHHHHHHHHhcCC-CceEEEEeecCcccc---hhhhhhhccceeEEEEeccchhhhhhhhhceeecchH
Confidence 66666666 666776666665431 555555532221111 1234455566778877766444444478899999988
Q ss_pred hhhHHHHHHHhcCCCccccceeeeeeecccccCchh-h-h------------ccccccccceeeccccHHHHHHHHHhhh
Q 016053 160 VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-Y-V------------KHLPLVAGAMIDSHVTAEYWKNRTRERL 225 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-~-~------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (396)
.+..++...... |....++.+++|+....+.++. . . ......+..++++..++..+.+.+.
T Consensus 155 ~~~~~l~~~~~~--p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~--- 229 (495)
T KOG0853|consen 155 SACVPLLKQLSG--PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFV--- 229 (495)
T ss_pred HHHHHHHHHhcC--CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhh---
Confidence 777776655554 8888899999999876655442 1 1 1124677788888888877776644
Q ss_pred cccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccC
Q 016053 226 RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLE 305 (396)
Q Consensus 226 g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~ 305 (396)
.++..++.+.+.++|.+.+.+.- .....+.+...|...+....+..+..+.++.+.||++.+++++..+...+++. .
T Consensus 230 ~L~~~d~~~~y~ei~~s~~~~~~-~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~--~ 306 (495)
T KOG0853|consen 230 SLSNSDITSTYPEIDGSWFTYGQ-YESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEP--S 306 (495)
T ss_pred hcCCCCcceeeccccchhccccc-cccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCC--C
Confidence 34555589999999988876410 01112334556677788777899999999999999999999999988776542 3
Q ss_pred CCCEEEEEEecC-----CCccchHHHHHHHHHHhcCC-CCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHH
Q 016053 306 VPSVHAVIIGSD-----MNAQTKFESELRNYVMQKKI-QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 379 (396)
Q Consensus 306 ~~~~~l~ivG~g-----~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm 379 (396)
.++.+++++|+. ..++..+.++++++++++++ .+.|.|+....+...|..++|....-+..-.|+||++++|||
T Consensus 307 ~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAM 386 (495)
T KOG0853|consen 307 ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAM 386 (495)
T ss_pred CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHH
Confidence 367899999944 34456688899999999988 577888888766666777776533222222699999999999
Q ss_pred hcCCCEEEcCCCCCCC
Q 016053 380 AFQLPVLVLSELHPSI 395 (396)
Q Consensus 380 a~G~PVI~t~~gG~~~ 395 (396)
+||+|||||+.|||.+
T Consensus 387 a~glPvvAt~~GGP~E 402 (495)
T KOG0853|consen 387 ACGLPVVATNNGGPAE 402 (495)
T ss_pred hcCCCEEEecCCCceE
Confidence 9999999999999964
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=186.38 Aligned_cols=255 Identities=14% Similarity=0.063 Sum_probs=166.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc-------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG------------- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 141 (396)
|||+++.. ..||.++...+++++|.++||+|++++..... ........|+++.....
T Consensus 2 ~~i~i~~~--g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 71 (357)
T PRK00726 2 KKILLAGG--GTGGHVFPALALAEELKKRGWEVLYLGTARGM--------EARLVPKAGIEFHFIPSGGLRRKGSLANLK 71 (357)
T ss_pred cEEEEEcC--cchHhhhHHHHHHHHHHhCCCEEEEEECCCch--------hhhccccCCCcEEEEeccCcCCCChHHHHH
Confidence 68888873 34788899999999999999999999864321 01111123444432211
Q ss_pred -----------hhhhhhccCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 142 -----------QETINTALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 142 -----------~~~~~~~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
.+.+.+..+||+||+|+......... .+..+ .|++++.|.. +........+...+.+++.
T Consensus 72 ~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~-----~p~v~~~~~~---~~~~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 72 APFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLG-----IPLVIHEQNA---VPGLANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcC-----CCEEEEcCCC---CccHHHHHHHHHhchheEC
Confidence 01233457899999998544333222 22233 3455544432 1111111233455666655
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
+... . . . .+..++.+++||+|.+.+.+.. .+++++++++.++|+++|+....|++..++
T Consensus 144 ~~~~---~----~-~--~~~~~i~vi~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l 202 (357)
T PRK00726 144 FPGA---F----P-E--FFKPKAVVTGNPVREEILALAA-----------PPARLAGREGKPTLLVVGGSQGARVLNEAV 202 (357)
T ss_pred chhh---h----h-c--cCCCCEEEECCCCChHhhcccc-----------hhhhccCCCCCeEEEEECCcHhHHHHHHHH
Confidence 4421 1 1 1 4668899999999987654311 123567767788889999888888876655
Q ss_pred -HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCC
Q 016053 290 -HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 290 -~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~ 368 (396)
+|++++.+ . + ..++++|+|. . +.+.+..+ +++. |+|.|+++++.++|++||+++.+|-
T Consensus 203 ~~a~~~~~~-------~-~-~~~~~~G~g~-----~-~~~~~~~~-~~~~--v~~~g~~~~~~~~~~~~d~~i~~~g--- 261 (357)
T PRK00726 203 PEALALLPE-------A-L-QVIHQTGKGD-----L-EEVRAAYA-AGIN--AEVVPFIDDMAAAYAAADLVICRAG--- 261 (357)
T ss_pred HHHHHHhhh-------C-c-EEEEEcCCCc-----H-HHHHHHhh-cCCc--EEEeehHhhHHHHHHhCCEEEECCC---
Confidence 88877642 1 2 5678889885 3 44454455 6664 9999999999999999999997553
Q ss_pred CCccHHHHHHHhcCCCEEEcCCCC
Q 016053 369 ECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 369 E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++++|||++|+|||++..+|
T Consensus 262 ---~~~~~Ea~~~g~Pvv~~~~~~ 282 (357)
T PRK00726 262 ---ASTVAELAAAGLPAILVPLPH 282 (357)
T ss_pred ---HHHHHHHHHhCCCEEEecCCC
Confidence 689999999999999998764
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=185.19 Aligned_cols=254 Identities=15% Similarity=0.133 Sum_probs=166.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc--Cc------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KG------------ 141 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------ 141 (396)
+|++.+ ...||..+...+++++|.++||+|++++...... .......++++... ..
T Consensus 1 ~~~~~~--~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (350)
T cd03785 1 RILIAG--GGTGGHIFPALALAEELRERGAEVLFLGTKRGLE--------ARLVPKAGIPLHTIPVGGLRRKGSLKKLKA 70 (350)
T ss_pred CEEEEe--cCchhhhhHHHHHHHHHHhCCCEEEEEECCCcch--------hhcccccCCceEEEEecCcCCCChHHHHHH
Confidence 355555 3447888999999999999999999998543311 11111123333211 10
Q ss_pred ----------hhhhhhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeecccccCchhhhc-cccccccceee
Q 016053 142 ----------QETINTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVK-HLPLVAGAMID 209 (396)
Q Consensus 142 ----------~~~~~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~-~~~~~~~~~~~ 209 (396)
...+.+..+||+||+|......... .+...++| ++++.|.. +.....+ .....+.+++.
T Consensus 71 ~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p-----~v~~~~~~----~~~~~~~~~~~~~~~vi~~ 141 (350)
T cd03785 71 PFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIP-----LVIHEQNA----VPGLANRLLARFADRVALS 141 (350)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCC-----EEEEcCCC----CccHHHHHHHHhhCEEEEc
Confidence 1122345789999999854433222 23334443 44333322 1111112 23346666666
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHH-
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF- 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~l- 288 (396)
+....++ .+..++.+|+||+|.+.+.+. . .++++++++++++++++|+....|+.+.+
T Consensus 142 s~~~~~~----------~~~~~~~~i~n~v~~~~~~~~----------~-~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l 200 (350)
T cd03785 142 FPETAKY----------FPKDKAVVTGNPVREEILALD----------R-ERARLGLRPGKPTLLVFGGSQGARAINEAV 200 (350)
T ss_pred chhhhhc----------CCCCcEEEECCCCchHHhhhh----------h-hHHhcCCCCCCeEEEEECCcHhHHHHHHHH
Confidence 6554432 356789999999998766432 1 17788888888888888887777777654
Q ss_pred HHHHHHHHHHHHhhccCCCCEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~ 367 (396)
+++++.+.+ ++++ ++++|++ +.+++++.++++ .++|+|.|+++++.++|+.||++|.+|-
T Consensus 201 ~~a~~~l~~---------~~~~~~~i~G~g------~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg-- 261 (350)
T cd03785 201 PEALAELLR---------KRLQVIHQTGKG------DLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAG-- 261 (350)
T ss_pred HHHHHHhhc---------cCeEEEEEcCCc------cHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCC--
Confidence 577776642 4566 4577876 346677777766 4789999999999999999999997543
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++++|||++|+|||+++.+|
T Consensus 262 ----~~t~~Eam~~G~Pvv~~~~~~ 282 (350)
T cd03785 262 ----ASTVAELAALGLPAILIPLPY 282 (350)
T ss_pred ----HhHHHHHHHhCCCEEEeecCC
Confidence 689999999999999988654
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-21 Score=183.25 Aligned_cols=275 Identities=10% Similarity=0.052 Sum_probs=174.3
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc---hhhhh-hh----------hhhhhhcceEEEE
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE---DEVIY-SL----------EHKMWDRGVQVIS 138 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~---~~~~~-~~----------~~~~~~~~~~~~~ 138 (396)
++||||+++... .+|.......++++|+++|++|.++.+.-.... ..... .+ ........-....
T Consensus 3 ~~~rili~t~~~-G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 81 (380)
T PRK13609 3 KNPKVLILTAHY-GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIYD 81 (380)
T ss_pred CCCeEEEEEcCC-CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccc
Confidence 557999999654 236679999999999999999777764322110 00000 00 0000000000000
Q ss_pred -----------cCchhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccce
Q 016053 139 -----------AKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAM 207 (396)
Q Consensus 139 -----------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~ 207 (396)
......+.+..+||+||++.+....... ....+.+ .|++..++++ ........+.++.++
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~-~~~~~~~---ip~~~~~td~-----~~~~~~~~~~ad~i~ 152 (380)
T PRK13609 82 KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPEL-KKQTGIS---IPTYNVLTDF-----CLHKIWVHREVDRYF 152 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHHHH-HHhcCCC---CCeEEEeCCC-----CCCcccccCCCCEEE
Confidence 0112344456899999998775443221 1122221 3344333322 111223345788888
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCE-EEEEEecccCCCCHH
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQD 286 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~-~il~vG~l~~~Kg~~ 286 (396)
+.+....+.+. ++|++++++.+++++++....... .+..+++++++++++. ++++.|++...|+++
T Consensus 153 ~~s~~~~~~l~-----~~gi~~~ki~v~G~p~~~~f~~~~--------~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~ 219 (380)
T PRK13609 153 VATDHVKKVLV-----DIGVPPEQVVETGIPIRSSFELKI--------NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVK 219 (380)
T ss_pred ECCHHHHHHHH-----HcCCChhHEEEECcccChHHcCcC--------CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHH
Confidence 88877766554 457888888888766654322111 1234788899976654 555668888889999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCC
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~ 366 (396)
.+++++.+. ++++++++|++. ...++.+++.+++++ ++|+|+|+++++.++|++||++|.
T Consensus 220 ~li~~l~~~-----------~~~~~viv~G~~---~~~~~~l~~~~~~~~--~~v~~~g~~~~~~~l~~~aD~~v~---- 279 (380)
T PRK13609 220 ELCQSLMSV-----------PDLQVVVVCGKN---EALKQSLEDLQETNP--DALKVFGYVENIDELFRVTSCMIT---- 279 (380)
T ss_pred HHHHHHhhC-----------CCcEEEEEeCCC---HHHHHHHHHHHhcCC--CcEEEEechhhHHHHHHhccEEEe----
Confidence 999887531 689988875422 135677888877665 689999999999999999999883
Q ss_pred CCCCccHHHHHHHhcCCCEEEcC-CCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLS-ELH 392 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~-~gG 392 (396)
++.|++++|||+||+|||+++ .+|
T Consensus 280 --~~gg~t~~EA~a~g~PvI~~~~~~g 304 (380)
T PRK13609 280 --KPGGITLSEAAALGVPVILYKPVPG 304 (380)
T ss_pred --CCCchHHHHHHHhCCCEEECCCCCC
Confidence 345899999999999999986 555
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=186.51 Aligned_cols=234 Identities=17% Similarity=0.150 Sum_probs=153.9
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecc-ccc--------Cc-------------hh-hh------cc
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR-GHY--------FK-------------LD-YV------KH 199 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~-~~~--------~~-------------~~-~~------~~ 199 (396)
.++|++|+|....+..+..+++...+ .+++++.|... +.+ +. .. .. ..
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~---VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVD---VSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCC---CCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 67999999998887766666654333 45888888642 111 10 00 01 11
Q ss_pred ccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHH---------HHhHHHHHHHcCCCCCC
Q 016053 200 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAK---------RVLREHVRESLGVRNED 270 (396)
Q Consensus 200 ~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~---------~~~~~~~r~~~g~~~~~ 270 (396)
...++.++++|..++..... .++.++++ |||||+|.+.|....+..+. +..+..++.++++++++
T Consensus 224 a~~Ad~fttVS~it~~E~~~----Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~ 297 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEH----LLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK 297 (590)
T ss_pred HhhCCEEEECChHHHHHHHH----HhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence 23567777777777766553 56777665 99999999998765432211 11233467778888788
Q ss_pred EEEEE-EecccC-CCCHHHHHHHHHHHHHHHHhhccCCCC--E-EEEEEecCCCc-------cchHHH------------
Q 016053 271 LLFAI-INSVSR-GKGQDLFLHSFYESLELIKEKKLEVPS--V-HAVIIGSDMNA-------QTKFES------------ 326 (396)
Q Consensus 271 ~~il~-vG~l~~-~Kg~~~li~a~~~l~~~~~~~~~~~~~--~-~l~ivG~g~~~-------~~~~~~------------ 326 (396)
.+++| +||+.. +||+|.+|+|++++...++.. +.+ + -|+|+-....+ .+...+
T Consensus 298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~---~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~ 374 (590)
T cd03793 298 TLYFFTAGRYEFSNKGADMFLEALARLNYLLKVE---GSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEK 374 (590)
T ss_pred eEEEEEeeccccccCCHHHHHHHHHHHHHHHHhc---CCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHH
Confidence 88877 799998 999999999999998777653 232 2 23333322110 001111
Q ss_pred -------------------------------------------------------HHHHHHHhcCCCC------cEEEec
Q 016053 327 -------------------------------------------------------ELRNYVMQKKIQD------RVHFVN 345 (396)
Q Consensus 327 -------------------------------------------------------~l~~~~~~~~l~~------~V~~~g 345 (396)
.+.+.+++.++.+ +|+|++
T Consensus 375 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P 454 (590)
T cd03793 375 IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHP 454 (590)
T ss_pred hhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcc
Confidence 1122222222332 356666
Q ss_pred Cc---------CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCCC
Q 016053 346 KT---------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSIW 396 (396)
Q Consensus 346 ~~---------~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~~ 396 (396)
.- .+..++++.||++|+||. +|+||++++||||||+|||+|+.+|-..|
T Consensus 455 ~~L~~~~~~~g~~y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~~gf~~~ 512 (590)
T cd03793 455 EFLSSTNPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNLSGFGCF 512 (590)
T ss_pred cccCCCCCcCCcchHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccCcchhhh
Confidence 31 458899999999999999 99999999999999999999999987443
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=186.44 Aligned_cols=235 Identities=14% Similarity=0.083 Sum_probs=150.8
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-------CchhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+|++|+.........+.+. .|. .++.++.|...+.. ......+-+..+|.+-..+....+.+....
T Consensus 126 ~~~d~vwvhDYhl~l~p~~lr~~-~~~--~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~ 202 (456)
T TIGR02400 126 QPGDIVWVHDYHLMLLPAMLREL-GVQ--NKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAV 202 (456)
T ss_pred CCCCEEEEecchhhHHHHHHHhh-CCC--CeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence 44589999997655444444443 333 45777888542111 111122333345555555544444444433
Q ss_pred Hhhhcc-----------cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 222 RERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 222 ~~~~g~-----------~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
.+..|. ...++.++|||||++.|.+.............+|+++ .++++|+++||+.+.||++.+++
T Consensus 203 ~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi~~ll~ 279 (456)
T TIGR02400 203 SRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGLPERLL 279 (456)
T ss_pred HHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCHHHHHH
Confidence 322332 3346889999999999976532222122234577776 36789999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc--------CCCC--cEEEecC---cCCHHHHHHHc
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK--------KIQD--RVHFVNK---TLTVAPYLAAI 357 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~--------~l~~--~V~~~g~---~~~~~~~~~~a 357 (396)
|++++.+..++. ..++.|+++|....++.+.+.++++.++++ +..+ .+++++. .+++.++|++|
T Consensus 280 A~~~ll~~~p~~---~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aa 356 (456)
T TIGR02400 280 AFERFLEEHPEW---RGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAA 356 (456)
T ss_pred HHHHHHHhCccc---cCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhC
Confidence 999987633210 013668888632222223455555555543 1111 1555553 38899999999
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCC----EEEcCCCCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLP----VLVLSELHPS 394 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~P----VI~t~~gG~~ 394 (396)
|++|+||. .||||++++||||||+| ||+|+.+|++
T Consensus 357 Dv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~ 395 (456)
T TIGR02400 357 DVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAA 395 (456)
T ss_pred cEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCCh
Confidence 99999999 99999999999999999 9999988864
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=169.89 Aligned_cols=211 Identities=25% Similarity=0.224 Sum_probs=148.9
Q ss_pred EEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEE
Q 016053 77 VLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (396)
Q Consensus 77 Il~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (396)
|+++++... .||.++....+++.|+++||+|+++.. +.. .........+||+|
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~~------------~~~-------------~~~~~~~~~~~D~i 55 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARRGHEVEVVAL------------LLL-------------LLLRILRGFKPDVV 55 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHcCCeEEEEEe------------chH-------------HHHHHHhhcCCCEE
Confidence 455665544 588889999999999999999999980 000 11122235799999
Q ss_pred EEcCchhhHHHH--HHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCE
Q 016053 155 VLNTAVAGKWLD--AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDT 232 (396)
Q Consensus 155 ~~~~~~~~~~~~--~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~ 232 (396)
|+|+........ .....+ .+++++.|+........... ......
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~-----------------~~~~~~------------ 101 (229)
T cd01635 56 HAHGYYPAPLALLLAARLLG-----IPLVLTVHGVNRSLLEGVPL-----------------SLLALS------------ 101 (229)
T ss_pred EEcCCCcHHHHHHHHHhhCC-----CCEEEEEcCccHhhcccCcH-----------------HHHHHH------------
Confidence 999976555432 222222 55888888763221110000 000000
Q ss_pred EEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEE
Q 016053 233 YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV 312 (396)
Q Consensus 233 ~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ 312 (396)
. ......++|++.+.||++.+++++..+.+ +.++++++
T Consensus 102 ---------------------------~--------~~~~~~~~g~~~~~k~~~~~~~a~~~l~~-------~~~~~~~~ 139 (229)
T cd01635 102 ---------------------------I--------GLADKVFVGRLAPEKGLDDLIEAFALLKE-------RGPDLKLV 139 (229)
T ss_pred ---------------------------H--------hhcceEEEEeecccCCHHHHHHHHHHHHH-------hCCCeEEE
Confidence 0 00011199999999999999999999875 33799999
Q ss_pred EEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 313 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 313 ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~---~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++|.+. .....++.+.+.+..++|.++|.. +++..+++.||+++.||. .|++|++++|||+||+|+|+|+
T Consensus 140 i~G~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~ 212 (229)
T cd01635 140 IAGDGP-----EREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATD 212 (229)
T ss_pred EEeCCC-----ChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcC
Confidence 999986 444445546677788899999983 566667777999999999 9999999999999999999999
Q ss_pred CCCCCC
Q 016053 390 ELHPSI 395 (396)
Q Consensus 390 ~gG~~~ 395 (396)
.++.++
T Consensus 213 ~~~~~e 218 (229)
T cd01635 213 VGGPPE 218 (229)
T ss_pred CCCcce
Confidence 998764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=190.22 Aligned_cols=235 Identities=14% Similarity=0.081 Sum_probs=148.3
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--Cc-----hhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--FK-----LDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--~~-----~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+||+|+.........+.+. .+. .++.++.|...+.. +. ....+.+..+|.+...+......+.+..
T Consensus 130 ~~~d~iwihDyhl~llp~~lr~~-~~~--~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~ 206 (460)
T cd03788 130 RPGDLVWVHDYHLLLLPQMLRER-GPD--ARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCC 206 (460)
T ss_pred CCCCEEEEeChhhhHHHHHHHhh-CCC--CeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence 46799999997655444444433 232 46888888652111 00 0112222234444444433333333322
Q ss_pred Hhhhcc------------cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 222 RERLRI------------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 222 ~~~~g~------------~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
....+. ...++.++|||||.+.|.+.... ...++.+++..+..+++++|+++||+.+.||++.++
T Consensus 207 ~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll 283 (460)
T cd03788 207 SRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS---PEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERL 283 (460)
T ss_pred HHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC---chhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHH
Confidence 222221 22468999999999998754321 111233444445557889999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccc----hHHHHHHHHHHhcCCC------CcEEEe-cC--cCCHHHHHHH
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT----KFESELRNYVMQKKIQ------DRVHFV-NK--TLTVAPYLAA 356 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~----~~~~~l~~~~~~~~l~------~~V~~~-g~--~~~~~~~~~~ 356 (396)
+|++.+.+..++. ..+++|+++|.+..++. ++.+++++++.+++.. ..|+++ |. .+++.++|+.
T Consensus 284 ~A~~~ll~~~p~~---~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~ 360 (460)
T cd03788 284 LAFERLLERYPEW---RGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA 360 (460)
T ss_pred HHHHHHHHhChhh---cCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHh
Confidence 9999887643210 01378998976532222 2444555555443221 235555 54 3899999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcCCC----EEEcCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQLP----VLVLSELHPS 394 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G~P----VI~t~~gG~~ 394 (396)
||++|+||. .||||++++||||||+| ||+|+.+|.+
T Consensus 361 aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 361 ADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred ccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccch
Confidence 999999999 99999999999999999 9999988864
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=177.95 Aligned_cols=253 Identities=15% Similarity=0.164 Sum_probs=159.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC--c-----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--G----------- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------- 141 (396)
|||+++... .||......+|+++|.++||+|++++...... .......|+++.... .
T Consensus 1 ~~i~~~~g~--~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~--------~~~~~~~g~~~~~i~~~~~~~~~~~~~l~ 70 (348)
T TIGR01133 1 KKVVLAAGG--TGGHIFPALAVAEELIKRGVEVLWLGTKRGLE--------KRLVPKAGIEFYFIPVGGLRRKGSFRLIK 70 (348)
T ss_pred CeEEEEeCc--cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcch--------hcccccCCCceEEEeccCcCCCChHHHHH
Confidence 378888743 35555666799999999999999998533210 011111244332211 0
Q ss_pred -----------hhhhhhccCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 142 -----------QETINTALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 142 -----------~~~~~~~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
...+.+..+||+||+|.......... ....++| ++++.+. ...........+..+.+++.
T Consensus 71 ~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p-----~v~~~~~---~~~~~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 71 TPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIP-----LFHHEQN---AVPGLTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCC-----EEEECCC---CCccHHHHHHHHHhCeeEEC
Confidence 12233557899999998654433332 2333433 4432221 11111112233467777777
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHH-H
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDL-F 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~-l 288 (396)
+....+++ +..+|+||+|...+.+.. .++.++++++.++|+++|+....|++.. +
T Consensus 143 ~~~~~~~~-------------~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l 198 (348)
T TIGR01133 143 FPGAKDHF-------------EAVLVGNPVRQEIRSLPV-----------PRERFGLREGKPTILVLGGSQGAKILNELV 198 (348)
T ss_pred chhHhhcC-------------CceEEcCCcCHHHhcccc-----------hhhhcCCCCCCeEEEEECCchhHHHHHHHH
Confidence 66554331 247999999876654221 1335788788899999998777888765 4
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEE-EEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~-ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~ 367 (396)
++|++.+.+ .+++++ ++|++ ..+.+++.++++++.+.+.|. .. ++.++|++||++|.+|
T Consensus 199 ~~a~~~l~~---------~~~~~~~~~g~~------~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~--- 258 (348)
T TIGR01133 199 PKALAKLAE---------KGIQIVHQTGKN------DLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRA--- 258 (348)
T ss_pred HHHHHHHhh---------cCcEEEEECCcc------hHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECC---
Confidence 578776643 345554 44443 346788888888876666666 33 8999999999999743
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+ |++++|||++|+|+|+++.+|
T Consensus 259 --g-~~~l~Ea~~~g~Pvv~~~~~~ 280 (348)
T TIGR01133 259 --G-ASTVAELAAAGVPAILIPYPY 280 (348)
T ss_pred --C-hhHHHHHHHcCCCEEEeeCCC
Confidence 2 789999999999999998865
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-20 Score=176.85 Aligned_cols=301 Identities=19% Similarity=0.157 Sum_probs=205.4
Q ss_pred cEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh-------------------hhhh
Q 016053 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH-------------------KMWD 131 (396)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~-------------------~~~~ 131 (396)
|||++++.+..+ ||-.-.+..|.++|++.|++|.|+.+.-+.-.......+.. ....
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 589998877433 88889999999999999999999996544211111110000 0001
Q ss_pred cceEEEEcCchhhhh----------------------------hc---cCCcEEEEcCchhhHHHHHHHhcCCCccccce
Q 016053 132 RGVQVISAKGQETIN----------------------------TA---LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180 (396)
Q Consensus 132 ~~~~~~~~~~~~~~~----------------------------~~---~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~v 180 (396)
.+++++-........ .. ..|||||+|+...+.....++.........+.
T Consensus 81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~t 160 (487)
T COG0297 81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPT 160 (487)
T ss_pred CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCe
Confidence 112221111100000 01 36999999997766654544443211223679
Q ss_pred eeeeeecc--cccC---------chh---------------hhccccccccceeeccccHHHHHHHHHhhh--------c
Q 016053 181 LWWIHEMR--GHYF---------KLD---------------YVKHLPLVAGAMIDSHVTAEYWKNRTRERL--------R 226 (396)
Q Consensus 181 v~~~h~~~--~~~~---------~~~---------------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--------g 226 (396)
++++|+.. +.+. +.. .+..+..++.+.++|.+.+..+... .+ .
T Consensus 161 VfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~---~~g~gl~g~l~ 237 (487)
T COG0297 161 VFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTP---EYGEGLEGLLS 237 (487)
T ss_pred EEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccc---cccccchhhhh
Confidence 99999864 1111 000 0112235666777777666554411 11 1
Q ss_pred ccCCCEEEEecCCccchhhhhhhhH-----------HHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHHH
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFY 293 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~-----------~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~~ 293 (396)
....++.-|.||+|.+.+.|..++. .+..++..+++++|++. +.+++.++||+..+||+|.+++++.
T Consensus 238 ~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~ 317 (487)
T COG0297 238 WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAID 317 (487)
T ss_pred hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHH
Confidence 2236689999999999887764421 25677889999999973 5699999999999999999999999
Q ss_pred HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEe-cCc-CCHHHHHHHcCEEEecCCCCCCCc
Q 016053 294 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV-NKT-LTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~-g~~-~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
.+.+ ..+++++.|.| ++.+++.+..+++++.. ++... |+. .-....|+.+|++++||+ .|+|
T Consensus 318 ~~l~---------~~~~~vilG~g---d~~le~~~~~la~~~~~--~~~~~i~~~~~la~~i~agaD~~lmPSr--fEPc 381 (487)
T COG0297 318 ELLE---------QGWQLVLLGTG---DPELEEALRALASRHPG--RVLVVIGYDEPLAHLIYAGADVILMPSR--FEPC 381 (487)
T ss_pred HHHH---------hCceEEEEecC---cHHHHHHHHHHHHhcCc--eEEEEeeecHHHHHHHHhcCCEEEeCCc--CcCC
Confidence 9876 45999999998 35588899999998764 44443 444 346788999999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++-++||+.|+++|+..+||-+
T Consensus 382 GL~ql~amryGtvpIv~~tGGLa 404 (487)
T COG0297 382 GLTQLYAMRYGTLPIVRETGGLA 404 (487)
T ss_pred cHHHHHHHHcCCcceEcccCCcc
Confidence 99999999999999999999964
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=181.07 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=166.3
Q ss_pred ChHHHHHHHHHHHHhCCCEEEE--EeccCCCCchhhhhhhhhhhhhcceE--EEEcCch---hhhhhccCCcEEEEcCch
Q 016053 88 GGPLLLMELAFLLRGVGTKVNW--ITIQKPSEEDEVIYSLEHKMWDRGVQ--VISAKGQ---ETINTALKADLIVLNTAV 160 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~G~~V~v--i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~DiV~~~~~~ 160 (396)
|-...+..|++.|++++.++.+ .+..... .. ........++. .++.... +.+.+..+||++|++...
T Consensus 61 Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~--~~----~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~~~~ 134 (425)
T PRK05749 61 GETRAAIPLIRALRKRYPDLPILVTTMTPTG--SE----RAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIMETE 134 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeCCCccH--HH----HHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEEecc
Confidence 4449999999999998755443 3222111 11 11111111233 3343332 355567899999987432
Q ss_pred h-hHHHHHHHhcCCCccccceeeeeeeccccc------CchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEE
Q 016053 161 A-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTY 233 (396)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~ 233 (396)
. ...+..+...++| ++...|...... +.......++.++.+++.|....+.+. .+|++.+ +.
T Consensus 135 ~~~~~l~~~~~~~ip-----~vl~~~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~-----~~g~~~~-i~ 203 (425)
T PRK05749 135 LWPNLIAELKRRGIP-----LVLANARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAERFL-----ALGAKNE-VT 203 (425)
T ss_pred hhHHHHHHHHHCCCC-----EEEEeccCChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCCC-cE
Confidence 1 1223334455554 333333221111 111223345677888888888777655 4577666 88
Q ss_pred EEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEE
Q 016053 234 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI 313 (396)
Q Consensus 234 vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~i 313 (396)
+++|+ +.+.+.+... ......++++++ +++++++++|+ ..|+.+.+++|++++.+ ++|+++|+|
T Consensus 204 vi~n~-~~d~~~~~~~----~~~~~~~r~~~~--~~~~vil~~~~--~~~~~~~ll~A~~~l~~-------~~~~~~lii 267 (425)
T PRK05749 204 VTGNL-KFDIEVPPEL----AARAATLRRQLA--PNRPVWIAAST--HEGEEELVLDAHRALLK-------QFPNLLLIL 267 (425)
T ss_pred ecccc-cccCCCChhh----HHHHHHHHHHhc--CCCcEEEEeCC--CchHHHHHHHHHHHHHH-------hCCCcEEEE
Confidence 88885 3332221111 112455777777 45667777776 36889999999998765 348999999
Q ss_pred EecCCCccchHH-HHHHHHHHhcCCCC-------------cEEEecCcCCHHHHHHHcCEEEe-cCCCCCCCccHHHHHH
Q 016053 314 IGSDMNAQTKFE-SELRNYVMQKKIQD-------------RVHFVNKTLTVAPYLAAIDVLVQ-NSQAWGECFGRITIEA 378 (396)
Q Consensus 314 vG~g~~~~~~~~-~~l~~~~~~~~l~~-------------~V~~~g~~~~~~~~~~~aDv~v~-pS~~~~E~fg~~~lEA 378 (396)
+|+|+ .+ ++++++++++|+.. +|.+.+...|+..+|+.||++++ +|. .|++|.+++||
T Consensus 268 vG~g~-----~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~--~e~~g~~~lEA 340 (425)
T PRK05749 268 VPRHP-----ERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSL--VKRGGHNPLEP 340 (425)
T ss_pred cCCCh-----hhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCc--CCCCCCCHHHH
Confidence 99986 43 67899999888752 34444455789999999999655 677 89999999999
Q ss_pred HhcCCCEEEcCC
Q 016053 379 MAFQLPVLVLSE 390 (396)
Q Consensus 379 ma~G~PVI~t~~ 390 (396)
||||+|||+++.
T Consensus 341 ma~G~PVI~g~~ 352 (425)
T PRK05749 341 AAFGVPVISGPH 352 (425)
T ss_pred HHhCCCEEECCC
Confidence 999999999765
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=172.48 Aligned_cols=212 Identities=15% Similarity=0.051 Sum_probs=142.1
Q ss_pred hhhhccCCcEEEEcCchh----hHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHH
Q 016053 144 TINTALKADLIVLNTAVA----GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKN 219 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~----~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 219 (396)
.+.+..+||+||++.+.. ...+....+.+. ...|++..+.++ ......+..+.++.+++.|....+.+.
T Consensus 94 ~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~--~~~p~~~~~tD~----~~~~~~w~~~~~d~~~~~s~~~~~~l~- 166 (382)
T PLN02605 94 KGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELG--KKIPFTTVVTDL----GTCHPTWFHKGVTRCFCPSEEVAKRAL- 166 (382)
T ss_pred HHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccC--CCCCEEEEECCC----CCcCcccccCCCCEEEECCHHHHHHHH-
Confidence 344557999999987652 222222221111 113444444433 111223334678888877766655544
Q ss_pred HHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHH
Q 016053 220 RTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELI 299 (396)
Q Consensus 220 ~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~ 299 (396)
+.|++++++.+++++++.+.+.+.. .+.++|+++|++++.++|+++|+....|++..+++++..+....
T Consensus 167 ----~~g~~~~ki~v~g~~v~~~f~~~~~-------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~ 235 (382)
T PLN02605 167 ----KRGLEPSQIRVYGLPIRPSFARAVR-------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDK 235 (382)
T ss_pred ----HcCCCHHHEEEECcccCHhhccCCC-------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccc
Confidence 4588888999999998876543221 24568999999999999999999999999999999987643100
Q ss_pred HhhccCCCCEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 300 KEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 300 ~~~~~~~~~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
.. +.++.+ ++++|.+. ..++.+++. ....+|+|+|+++++.++|++||++|.++ .|++++||
T Consensus 236 ~~---~~~~~~~~vi~G~~~----~~~~~L~~~----~~~~~v~~~G~~~~~~~l~~aaDv~V~~~------g~~ti~EA 298 (382)
T PLN02605 236 NL---GKPIGQVVVICGRNK----KLQSKLESR----DWKIPVKVRGFVTNMEEWMGACDCIITKA------GPGTIAEA 298 (382)
T ss_pred cc---cCCCceEEEEECCCH----HHHHHHHhh----cccCCeEEEeccccHHHHHHhCCEEEECC------CcchHHHH
Confidence 00 014565 66777652 234445443 22357999999999999999999999744 37899999
Q ss_pred HhcCCCEEEcCC
Q 016053 379 MAFQLPVLVLSE 390 (396)
Q Consensus 379 ma~G~PVI~t~~ 390 (396)
|+||+|||+++.
T Consensus 299 ma~g~PvI~~~~ 310 (382)
T PLN02605 299 LIRGLPIILNGY 310 (382)
T ss_pred HHcCCCEEEecC
Confidence 999999999984
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.4e-20 Score=154.70 Aligned_cols=125 Identities=24% Similarity=0.409 Sum_probs=110.1
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcC
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
++..+...+.++++++|+++|++.+.||++.+++++..+.+.. .++++++|+|.+. +...++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~------~~~~~l~i~G~~~-----~~~~~~~~~~~~~ 70 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKK------NPNYKLVIVGDGE-----YKKELKNLIEKLN 70 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHH------HTTEEEEEESHCC-----HHHHHHHHHHHTT
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhc------CCCeEEEEEcccc-----ccccccccccccc
Confidence 5678888999999999999999999999999999999987531 1799999999765 7888999999999
Q ss_pred CCCcEEEecCcC--CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 337 IQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 337 l~~~V~~~g~~~--~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+.++++|+|..+ ++.++|+.||++|+||. .|+||++++|||+||+|||+++.||+.
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~ 128 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNN 128 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHH
T ss_pred ccccccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCc
Confidence 999999999975 99999999999999999 999999999999999999999988753
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=165.18 Aligned_cols=274 Identities=12% Similarity=0.092 Sum_probs=162.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCC---CEEEEEe---ccCCCCchhhhhhhhh----------hhhhcceEEE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG---TKVNWIT---IQKPSEEDEVIYSLEH----------KMWDRGVQVI 137 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G---~~V~vi~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 137 (396)
+||||+++... .+|.......|.++|.+.| ++|.++- ...+.........+.. .+....-...
T Consensus 5 ~~~vlil~~~~-G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~~ 83 (391)
T PRK13608 5 NKKILIITGSF-GNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDKL 83 (391)
T ss_pred CceEEEEECCC-CchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchhh
Confidence 46899999432 3455699999999998875 4555443 1112111100000100 0000000000
Q ss_pred --------EcCchhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 138 --------SAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 138 --------~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
.......+.+..+||+|+++.+.... ..++..+. ...|++....+. .....+..+..+.+++.
T Consensus 84 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~--~~l~~~~~--~~iP~~~v~td~-----~~~~~w~~~~~d~~~v~ 154 (391)
T PRK13608 84 DKCFYKYYGLNKLINLLIKEKPDLILLTFPTPVM--SVLTEQFN--INIPVATVMTDY-----RLHKNWITPYSTRYYVA 154 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHHH--HHHHHhcC--CCCCEEEEeCCC-----CcccccccCCCCEEEEC
Confidence 00122344456899999998775432 22222111 112343222222 11112233567777777
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCE-EEEEEecccCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~-~il~vG~l~~~Kg~~~l 288 (396)
+....+.+. +.|++.+++.+++++++....... .+...++++|++++++ ++++.|++...||++.+
T Consensus 155 s~~~~~~l~-----~~gi~~~ki~v~GiPv~~~f~~~~--------~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~l 221 (391)
T PRK13608 155 TKETKQDFI-----DVGIDPSTVKVTGIPIDNKFETPI--------DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTM 221 (391)
T ss_pred CHHHHHHHH-----HcCCCHHHEEEECeecChHhcccc--------cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHH
Confidence 777666554 347888889998888764432211 1345678899976655 45668999889999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~ 368 (396)
++++.+ ..+++++++++++. .+..+++++. .+..++|+++|+++++.++|++||++|.
T Consensus 222 i~~~~~----------~~~~~~~vvv~G~~---~~l~~~l~~~---~~~~~~v~~~G~~~~~~~~~~~aDl~I~------ 279 (391)
T PRK13608 222 ITDILA----------KSANAQVVMICGKS---KELKRSLTAK---FKSNENVLILGYTKHMNEWMASSQLMIT------ 279 (391)
T ss_pred HHHHHh----------cCCCceEEEEcCCC---HHHHHHHHHH---hccCCCeEEEeccchHHHHHHhhhEEEe------
Confidence 998632 12678887665332 1123344433 3444689999999999999999999995
Q ss_pred CCccHHHHHHHhcCCCEEEcC-CCC
Q 016053 369 ECFGRITIEAMAFQLPVLVLS-ELH 392 (396)
Q Consensus 369 E~fg~~~lEAma~G~PVI~t~-~gG 392 (396)
++.|+++.|||++|+|+|+++ .+|
T Consensus 280 k~gg~tl~EA~a~G~PvI~~~~~pg 304 (391)
T PRK13608 280 KPGGITISEGLARCIPMIFLNPAPG 304 (391)
T ss_pred CCchHHHHHHHHhCCCEEECCCCCC
Confidence 235899999999999999996 444
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=177.40 Aligned_cols=230 Identities=13% Similarity=0.093 Sum_probs=146.9
Q ss_pred CCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--C-----chhhhccccccccceeeccccHHHHHHHHH
Q 016053 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--F-----KLDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.=|+|++|+......-..+.+. .|. .++.++.|...+.. | .....+-+..+|.+-..+...++.+.+...
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~-~~~--~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~ 223 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEY-NNK--MKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACT 223 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHh-CCC--CcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHH
Confidence 3489999996554444444443 443 46788888653211 1 111222233444444444444444443332
Q ss_pred hhhcc-----------cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHH
Q 016053 223 ERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291 (396)
Q Consensus 223 ~~~g~-----------~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a 291 (396)
...+. ...++.++|||||.+.|.+.............+++.++ ++.+|+++||+.+.||++.+++|
T Consensus 224 r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~A 300 (797)
T PLN03063 224 RILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GRKVILGVDRLDMIKGIPQKYLA 300 (797)
T ss_pred HHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CCeEEEEecccccccCHHHHHHH
Confidence 22222 22468899999999988654322111222335566554 56789999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCE----EEEEEecCCCccchHHHHHHHHHHhcC--CCCc--------EEEec-Cc--CCHHHHH
Q 016053 292 FYESLELIKEKKLEVPSV----HAVIIGSDMNAQTKFESELRNYVMQKK--IQDR--------VHFVN-KT--LTVAPYL 354 (396)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~----~l~ivG~g~~~~~~~~~~l~~~~~~~~--l~~~--------V~~~g-~~--~~~~~~~ 354 (396)
++.+.+.. |++ .|+.++....++.+.++++++.++++. ++.+ |++++ .. +++..+|
T Consensus 301 fe~lL~~~-------P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly 373 (797)
T PLN03063 301 FEKFLEEN-------PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALY 373 (797)
T ss_pred HHHHHHhC-------ccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHH
Confidence 99987633 554 455444322123345566777776653 3222 33443 32 7899999
Q ss_pred HHcCEEEecCCCCCCCccHHHHHHHhcCCC----EEEcCCCCCC
Q 016053 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLVLSELHPS 394 (396)
Q Consensus 355 ~~aDv~v~pS~~~~E~fg~~~lEAma~G~P----VI~t~~gG~~ 394 (396)
++||++|+||. .||||++++||||||+| +|.|+.+|++
T Consensus 374 ~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~ 415 (797)
T PLN03063 374 AITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAG 415 (797)
T ss_pred HhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCch
Confidence 99999999999 99999999999999999 9999999874
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=166.25 Aligned_cols=266 Identities=15% Similarity=0.038 Sum_probs=163.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCC-CCchhhhhhhhhhhhhcceEEEE----------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP-SEEDEVIYSLEHKMWDRGVQVIS---------------- 138 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------- 138 (396)
+++++.+....+.....-..++..|.++|+.|..+..... ...... ......+..
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPR--------GRDWVRVVLRLRAALRRPRRLDPLI 76 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCccCCCCCC--------CcccEEeeecccccccCccccCccc
Confidence 3445554455566678888999999989999999985432 100000 000111110
Q ss_pred --cCc---hh----hh-----hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccC--chh----hhc
Q 016053 139 --AKG---QE----TI-----NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF--KLD----YVK 198 (396)
Q Consensus 139 --~~~---~~----~~-----~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~--~~~----~~~ 198 (396)
... .+ .+ ....+..+++.+.|....+... ..+ .+++|.+++....+. ... ...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~~~~~~~--~~~-----~~~Vyd~~D~~~~~~~~~~~~~~~e~~ 149 (373)
T cd04950 77 PARRRRLLRLLLNALLFWAQLELGFGRPILWYYTPYTLPVAAL--LQA-----SLVVYDCVDDLSAFPGGPPELLEAERR 149 (373)
T ss_pred cchhhhHHHHHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHhh--cCC-----CeEEEEcccchhccCCCCHHHHHHHHH
Confidence 000 00 00 1134556777777765554333 111 457887776532221 111 234
Q ss_pred cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEec
Q 016053 199 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 278 (396)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~ 278 (396)
.++.++.+++.|....+.+. .++ .++.+||||+|.+.|.+...... . .+. + ...++++|+|+|+
T Consensus 150 ~~~~ad~vi~~S~~l~~~~~-----~~~---~~i~~i~ngvd~~~f~~~~~~~~----~--~~~-~-~~~~~~~i~y~G~ 213 (373)
T cd04950 150 LLKRADLVFTTSPSLYEAKR-----RLN---PNVVLVPNGVDYEHFAAARDPPP----P--PAD-L-AALPRPVIGYYGA 213 (373)
T ss_pred HHHhCCEEEECCHHHHHHHh-----hCC---CCEEEcccccCHHHhhcccccCC----C--hhH-H-hcCCCCEEEEEec
Confidence 45677778877777665443 233 67999999999998865421100 0 011 1 1246789999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHH
Q 016053 279 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 356 (396)
Q Consensus 279 l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~ 356 (396)
+.+.++++.+.++++. .|+++|+++|++... ....+ +...+||+|+|.+ +++..+++.
T Consensus 214 l~~~~d~~ll~~la~~-----------~p~~~~vliG~~~~~-----~~~~~----~~~~~nV~~~G~~~~~~l~~~l~~ 273 (373)
T cd04950 214 IAEWLDLELLEALAKA-----------RPDWSFVLIGPVDVS-----IDPSA----LLRLPNVHYLGPKPYKELPAYLAG 273 (373)
T ss_pred cccccCHHHHHHHHHH-----------CCCCEEEEECCCcCc-----cChhH----hccCCCEEEeCCCCHHHHHHHHHh
Confidence 9998887655544432 289999999987211 11111 1113689999987 789999999
Q ss_pred cCEEEecCCC---CCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 357 IDVLVQNSQA---WGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 357 aDv~v~pS~~---~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+|++++|+.. ..+++|++++||||||+|||+|+.+.
T Consensus 274 ~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~ 312 (373)
T cd04950 274 FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE 312 (373)
T ss_pred CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH
Confidence 9999999862 13468999999999999999998764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.7e-17 Score=154.15 Aligned_cols=275 Identities=16% Similarity=0.117 Sum_probs=166.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcc--eEEEEcCc-----------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRG--VQVISAKG----------- 141 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------- 141 (396)
||++++..-+-- ..+.-+.++|++. |+++.++..+...... ....+.......+ +.......
T Consensus 1 ~i~~~~gtr~~~---~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 76 (363)
T cd03786 1 KILVVTGTRPEY---IKLAPLIRALKKDPGFELVLVVTGQHYDME-MGVTFFEILFIIKPDYDLLLGSDSQSLGAQTAGL 76 (363)
T ss_pred CEEEEEecCHHH---HHHHHHHHHHhcCCCCCEEEEEeCCCCChh-hhHHHHHhhCCCCCCEEEecCCCCCCHHHHHHHH
Confidence 467777432222 3677888889986 8999987754322111 1000111111111 11111110
Q ss_pred ---hhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeeccc----ccCchhhhccccccccceeeccc
Q 016053 142 ---QETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRG----HYFKLDYVKHLPLVAGAMIDSHV 212 (396)
Q Consensus 142 ---~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~----~~~~~~~~~~~~~~~~~~~~s~~ 212 (396)
........+||+||+|......+ ...+...++| ++...++... ...........+..+.+++.+..
T Consensus 77 ~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iP-----vv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 77 LIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIP-----VAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEE 151 (363)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCC-----EEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHH
Confidence 01223447999999997432222 2233444544 4543333222 11111111123455666666666
Q ss_pred cHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccC---CCCHHHH
Q 016053 213 TAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR---GKGQDLF 288 (396)
Q Consensus 213 ~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~---~Kg~~~l 288 (396)
..+.+. +.|++++++.+++|++ |...+.... ......++.++++++.+++++.|+... .||++.+
T Consensus 152 ~~~~l~-----~~G~~~~kI~vign~v~d~~~~~~~~------~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 152 ARRNLL-----QEGEPPERIFVVGNTMIDALLRLLEL------AKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred HHHHHH-----HcCCCcccEEEECchHHHHHHHHHHh------hccchhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 555544 4588889999999996 443322111 011223567888777788888998775 7999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCC-CCcEEEecCc--CCHHHHHHHcCEEEecCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNKT--LTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~~--~~~~~~~~~aDv~v~pS~ 365 (396)
++|++++.+ .++.+++.|.+. ..+.+++.+.++++ .++|+|+|.. +++..+|++||++|.+|.
T Consensus 221 ~~al~~l~~---------~~~~vi~~~~~~-----~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg 286 (363)
T cd03786 221 LEALAELAE---------EDVPVVFPNHPR-----TRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG 286 (363)
T ss_pred HHHHHHHHh---------cCCEEEEECCCC-----hHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc
Confidence 999998753 246666666654 56788888888776 6789999864 789999999999999885
Q ss_pred CCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 366 AWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 366 ~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
| +..|||++|+|||+++..
T Consensus 287 ------g-i~~Ea~~~g~PvI~~~~~ 305 (363)
T cd03786 287 ------G-IQEEASFLGVPVLNLRDR 305 (363)
T ss_pred ------c-HHhhhhhcCCCEEeeCCC
Confidence 3 478999999999999754
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=152.97 Aligned_cols=156 Identities=17% Similarity=0.113 Sum_probs=121.6
Q ss_pred EEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEE
Q 016053 232 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 311 (396)
Q Consensus 232 ~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l 311 (396)
+.++|.|||.+.|...............+|++++ ++.+|+.++|+++.||+...++|++++.+..++. ..+++|
T Consensus 250 v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~---~gkv~L 323 (487)
T TIGR02398 250 LGAHPVGTDPERIRSALAAASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLERRPEL---LGKVTL 323 (487)
T ss_pred EEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHHhCccc---cCceEE
Confidence 7899999999999755332222333567888887 6789999999999999999999999987744321 124799
Q ss_pred EEEecCCCcc----chHHHHHHHHHHhc-------CCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 312 VIIGSDMNAQ----TKFESELRNYVMQK-------KIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 312 ~ivG~g~~~~----~~~~~~l~~~~~~~-------~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
+++|.....+ .++..++++++.+. +..+-+.|.+.. +++..+|+.|||++.||. .||++++..|+
T Consensus 324 vqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Ey 401 (487)
T TIGR02398 324 VTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEY 401 (487)
T ss_pred EEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhH
Confidence 9998764222 23455666666554 555666777775 789999999999999999 99999999999
Q ss_pred HhcCC----CEEEcCCCCCCC
Q 016053 379 MAFQL----PVLVLSELHPSI 395 (396)
Q Consensus 379 ma~G~----PVI~t~~gG~~~ 395 (396)
+||+. |+|.|..+|++.
T Consensus 402 va~~~~~~GvLILSefaGaa~ 422 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAV 422 (487)
T ss_pred HhhhcCCCCCEEEeccccchh
Confidence 99999 999999999863
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=169.31 Aligned_cols=234 Identities=12% Similarity=0.065 Sum_probs=141.9
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-------CchhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+|++|+.........+... .|. .++-++.|...+.. ......+.+..+|.+-..+....+.+.+..
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~-~~~--~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~ 208 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRER-LPD--ARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSV 208 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhh-CCC--CcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 34499999996655544444443 333 45777788653211 011112222233333333333333333333
Q ss_pred Hhhhcc-----------cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 222 RERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 222 ~~~~g~-----------~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
.+..+. ...++.++|||||.+.|.+.............+|+.+ +++++|+++||+.+.||+..+++
T Consensus 209 ~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgRl~~~Kgi~~~l~ 285 (726)
T PRK14501 209 LRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDRLDYTKGIPRRLL 285 (726)
T ss_pred HHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecCcccccCHHHHHH
Confidence 222221 1235899999999999976543222122234456654 46779999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCcc----chHHHHHHHHHHhcC-------CCCcEEEecCc--CCHHHHHHHc
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQKK-------IQDRVHFVNKT--LTVAPYLAAI 357 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~----~~~~~~l~~~~~~~~-------l~~~V~~~g~~--~~~~~~~~~a 357 (396)
|++.+.+..++. ..+++|+++|.+...+ .+++.++.+++.+.+ ..+.+.|.|.. +++..+|+.|
T Consensus 286 A~~~ll~~~p~~---~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~a 362 (726)
T PRK14501 286 AFERFLEKNPEW---RGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAA 362 (726)
T ss_pred HHHHHHHhCccc---cCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhc
Confidence 999987633210 0147899997432111 123334444443322 11234455654 8999999999
Q ss_pred CEEEecCCCCCCCccHHHHHHHhc-----CCCEEEcCCCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAF-----QLPVLVLSELHP 393 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~-----G~PVI~t~~gG~ 393 (396)
|++++||. .||||++++||||| |+||++...|++
T Consensus 363 Dv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 363 DVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred cEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchh
Confidence 99999999 99999999999999 557777776765
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-15 Score=133.16 Aligned_cols=287 Identities=16% Similarity=0.132 Sum_probs=180.7
Q ss_pred cEEEEEeccCCC-CChHHHHHHHHHHHHhCC--CEEEEEeccCCCCchhhhhh----hhhhhhhcceEEEEcCch-----
Q 016053 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYS----LEHKMWDRGVQVISAKGQ----- 142 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----- 142 (396)
+.+.|..++.+- ||||+++..-.+.+++.- +...+.+.+-.-........ +.-.+...++.++.+...
T Consensus 44 ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea 123 (465)
T KOG1387|consen 44 KTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEA 123 (465)
T ss_pred eEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeeeec
Confidence 578999988665 777899999999888853 33333333322111111111 111222233333322110
Q ss_pred ---h----------------hhhhccCCcEEEEcCc--hhhHHHHHHHhcCCCccccceeeeeeecc-c-c---------
Q 016053 143 ---E----------------TINTALKADLIVLNTA--VAGKWLDAVLKEDVPRVLPNVLWWIHEMR-G-H--------- 190 (396)
Q Consensus 143 ---~----------------~~~~~~~~DiV~~~~~--~~~~~~~~~~~~~~~~~~~~vv~~~h~~~-~-~--------- 190 (396)
. .-.-+.-||+.+-... +....+.. ..+ .|++...|-.. + .
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~--l~~-----~~V~aYvHYP~iS~DML~~l~qrq 196 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRR--LRR-----IPVVAYVHYPTISTDMLKKLFQRQ 196 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHH--Hcc-----CceEEEEecccccHHHHHHHHhhh
Confidence 0 0012377898887663 33333332 233 34666677431 0 0
Q ss_pred ------cCchhhhccc--------cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHh
Q 016053 191 ------YFKLDYVKHL--------PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVL 256 (396)
Q Consensus 191 ------~~~~~~~~~~--------~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~ 256 (396)
+-+..|++++ ..++.++++|.-+...+.+ .++. .++.++|++++++....
T Consensus 197 ~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~q----iW~~--~~~~iVyPPC~~e~lks---------- 260 (465)
T KOG1387|consen 197 KSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQ----IWQS--NTCSIVYPPCSTEDLKS---------- 260 (465)
T ss_pred hcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHH----Hhhc--cceeEEcCCCCHHHHHH----------
Confidence 0011122222 2455566666555444333 4443 56889999998874432
Q ss_pred HHHHHHHcCC-CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHh
Q 016053 257 REHVRESLGV-RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQ 334 (396)
Q Consensus 257 ~~~~r~~~g~-~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~ 334 (396)
..+- ..+.+.++++|.+.|+|++. +++.++......+. .+..++++|+++|+.-. +|.+.-..+++.+++
T Consensus 261 ------~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl-~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~ 332 (465)
T KOG1387|consen 261 ------KFGTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPL-EASVSPIKLIIVGSCRNEEDEERVKSLKDLAEE 332 (465)
T ss_pred ------HhcccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCch-hhccCCceEEEEeccCChhhHHHHHHHHHHHHh
Confidence 2222 35678999999999999999 55555543322211 01346799999998764 345566789999999
Q ss_pred cCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 335 KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 335 ~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++|.|.-.. +++.++|+.|.+-|..-. .|.||+.+.|+||+|+-+|+.+.|||.
T Consensus 333 L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIsVVEyMAAGlIpi~h~SgGP~ 392 (465)
T KOG1387|consen 333 LKIPKHVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGISVVEYMAAGLIPIVHNSGGPL 392 (465)
T ss_pred cCCccceEEEecCCHHHHHHHhccceeehhhhh--hhhcchhHHHHHhcCceEEEeCCCCCc
Confidence 9999999998765 899999999999999888 999999999999999999999999985
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=144.91 Aligned_cols=265 Identities=15% Similarity=0.139 Sum_probs=153.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc--------------C
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--------------K 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 140 (396)
|||+++.. ..|| ..+...++++|++.++++.++...++.-.... ....+....+.+... .
T Consensus 2 ~ki~i~~G--gt~G-~i~~a~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 75 (380)
T PRK00025 2 LRIAIVAG--EVSG-DLLGAGLIRALKARAPNLEFVGVGGPRMQAAG---CESLFDMEELAVMGLVEVLPRLPRLLKIRR 75 (380)
T ss_pred ceEEEEec--CcCH-HHHHHHHHHHHHhcCCCcEEEEEccHHHHhCC---CccccCHHHhhhccHHHHHHHHHHHHHHHH
Confidence 48888873 3334 44444599999998888888874332100000 000000111111110 0
Q ss_pred chhhhhhccCCcEEEEcCch--hhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHH
Q 016053 141 GQETINTALKADLIVLNTAV--AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWK 218 (396)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~--~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 218 (396)
..+.+.+..+||+||++... .......+...++| ++++.+.....+......+..+..+.+++.+....+.+.
T Consensus 76 ~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip-----~i~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~ 150 (380)
T PRK00025 76 RLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIP-----TIHYVSPSVWAWRQGRAFKIAKATDHVLALFPFEAAFYD 150 (380)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCC-----EEEEeCCchhhcCchHHHHHHHHHhhheeCCccCHHHHH
Confidence 11233456899999998632 22222334445554 444333211011222223345567788888877666544
Q ss_pred HHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEE-EEec-ccCC-CCHHHHHHHHHHH
Q 016053 219 NRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA-IINS-VSRG-KGQDLFLHSFYES 295 (396)
Q Consensus 219 ~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il-~vG~-l~~~-Kg~~~li~a~~~l 295 (396)
..|.+ +.++.|++...... . .++.+.++++++++++++++ +.|+ .... ++++.++++++.+
T Consensus 151 -----~~g~~---~~~~G~p~~~~~~~-~-------~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l 214 (380)
T PRK00025 151 -----KLGVP---VTFVGHPLADAIPL-L-------PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLL 214 (380)
T ss_pred -----hcCCC---eEEECcCHHHhccc-c-------cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 23432 55555554322111 0 01356788899977776554 4453 3233 4478899999887
Q ss_pred HHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 296 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~-~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
.+ ++++++++++|.+. ..++++++.+++. ++. +.+.. +++..+|++||++|.+| |.+
T Consensus 215 ~~-------~~~~~~~ii~~~~~----~~~~~~~~~~~~~~~~~--v~~~~--~~~~~~~~~aDl~v~~s-------G~~ 272 (380)
T PRK00025 215 QQ-------RYPDLRFVLPLVNP----KRREQIEEALAEYAGLE--VTLLD--GQKREAMAAADAALAAS-------GTV 272 (380)
T ss_pred HH-------hCCCeEEEEecCCh----hhHHHHHHHHhhcCCCC--eEEEc--ccHHHHHHhCCEEEECc-------cHH
Confidence 65 23789999998632 3567788888776 554 55543 58999999999999977 578
Q ss_pred HHHHHhcCCCEEEc
Q 016053 375 TIEAMAFQLPVLVL 388 (396)
Q Consensus 375 ~lEAma~G~PVI~t 388 (396)
.+|||++|+|+|++
T Consensus 273 ~lEa~a~G~PvI~~ 286 (380)
T PRK00025 273 TLELALLKVPMVVG 286 (380)
T ss_pred HHHHHHhCCCEEEE
Confidence 88999999999987
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.2e-15 Score=139.10 Aligned_cols=273 Identities=15% Similarity=0.123 Sum_probs=156.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceE--E-EEcCc---------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--V-ISAKG--------- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~--------- 141 (396)
|||++++..-+-- ..+..+.++|++. ++++.++...... .. ..+.+...++. + +....
T Consensus 1 ~~i~~~~gtr~~~---~~~~p~~~~l~~~~~~~~~~~~tg~h~---~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 71 (365)
T TIGR00236 1 LKVSIVLGTRPEA---IKMAPLIRALKKYPEIDSYVIVTAQHR---EM---LDQVLDLFHLPPDYDLNIMSPGQTLGEIT 71 (365)
T ss_pred CeEEEEEecCHHH---HHHHHHHHHHhhCCCCCEEEEEeCCCH---HH---HHHHHHhcCCCCCeeeecCCCCCCHHHHH
Confidence 3788887432222 4788888999885 6777766643322 11 12222222221 1 11111
Q ss_pred ------hhhhhhccCCcEEEEcCchh-hH-HHHHHHhcCCCccccceeeeeeeccc--cc--Cchhhhc-cc-cccccce
Q 016053 142 ------QETINTALKADLIVLNTAVA-GK-WLDAVLKEDVPRVLPNVLWWIHEMRG--HY--FKLDYVK-HL-PLVAGAM 207 (396)
Q Consensus 142 ------~~~~~~~~~~DiV~~~~~~~-~~-~~~~~~~~~~~~~~~~vv~~~h~~~~--~~--~~~~~~~-~~-~~~~~~~ 207 (396)
...+....+||+||+|+... .. ....+...++| ++..-+..++ .+ ++....+ .. +.++.++
T Consensus 72 ~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ip-----v~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~ 146 (365)
T TIGR00236 72 SNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIP-----VGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHF 146 (365)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCC-----EEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhcc
Confidence 12334568999999997432 22 22334455655 3322222211 11 1112212 12 2346666
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc-cCCCCHH
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQD 286 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l-~~~Kg~~ 286 (396)
+.+....+.+. +.|++++++.+++|++....+.... ...+..++++++. ++.++++..++. ...||++
T Consensus 147 ~~s~~~~~~l~-----~~G~~~~~I~vign~~~d~~~~~~~-----~~~~~~~~~~~~~-~~~~vl~~~hr~~~~~k~~~ 215 (365)
T TIGR00236 147 APTEQAKDNLL-----RENVKADSIFVTGNTVIDALLTNVE-----IAYSSPVLSEFGE-DKRYILLTLHRRENVGEPLE 215 (365)
T ss_pred CCCHHHHHHHH-----HcCCCcccEEEeCChHHHHHHHHHh-----hccchhHHHhcCC-CCCEEEEecCchhhhhhHHH
Confidence 66666555543 3588888999999996333222111 0113456677763 334444444454 2468999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecC
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS 364 (396)
.+++|+.++.+ ++++++++++|.+. ....+. +.+.++..++|+|+|.. .++..+++.||+++.+|
T Consensus 216 ~ll~a~~~l~~-------~~~~~~~vi~~~~~---~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S 282 (365)
T TIGR00236 216 NIFKAIREIVE-------EFEDVQIVYPVHLN---PVVREP---LHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS 282 (365)
T ss_pred HHHHHHHHHHH-------HCCCCEEEEECCCC---hHHHHH---HHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC
Confidence 99999998764 23788988886442 112222 33334566789999976 56788999999998766
Q ss_pred CCCCCCccHHHHHHHhcCCCEEEc-CCCC
Q 016053 365 QAWGECFGRITIEAMAFQLPVLVL-SELH 392 (396)
Q Consensus 365 ~~~~E~fg~~~lEAma~G~PVI~t-~~gG 392 (396)
- ..++|||+||+|||++ +.||
T Consensus 283 g-------~~~~EA~a~g~PvI~~~~~~~ 304 (365)
T TIGR00236 283 G-------GVQEEAPSLGKPVLVLRDTTE 304 (365)
T ss_pred h-------hHHHHHHHcCCCEEECCCCCC
Confidence 3 5589999999999996 5555
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=4e-14 Score=135.04 Aligned_cols=269 Identities=16% Similarity=0.109 Sum_probs=160.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc--------------C
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--------------K 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 140 (396)
.||+++.. . .||..+-..++++|+++|+++.++...++.-... .....+....+.+... .
T Consensus 6 ~ki~i~aG--g-tsGhi~paal~~~l~~~~~~~~~~g~gg~~m~~~---g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~ 79 (385)
T TIGR00215 6 PTIALVAG--E-ASGDILGAGLRQQLKEHYPNARFIGVAGPRMAAE---GCEVLYSMEELSVMGLREVLGRLGRLLKIRK 79 (385)
T ss_pred CeEEEEeC--C-ccHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhC---cCccccChHHhhhccHHHHHHHHHHHHHHHH
Confidence 36777662 2 2334554599999999999999988543210000 0000000001111100 0
Q ss_pred chhhhhhccCCcEEEEcCchhhH--HHHHHHhcCCCccccceeeeeeecccccCchhhh-ccccccccceeeccccHHHH
Q 016053 141 GQETINTALKADLIVLNTAVAGK--WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYV-KHLPLVAGAMIDSHVTAEYW 217 (396)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~--~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~ 217 (396)
..+.+.+..+||+|++.+..+.. ....+...++| +++++. ..-+.+..... ...+.++.+++.+....+++
T Consensus 80 ~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip-----~v~~i~-P~~waw~~~~~r~l~~~~d~v~~~~~~e~~~~ 153 (385)
T TIGR00215 80 EVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIK-----IIYYIS-PQVWAWRKWRAKKIEKATDFLLAILPFEKAFY 153 (385)
T ss_pred HHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCC-----EEEEeC-CcHhhcCcchHHHHHHHHhHhhccCCCcHHHH
Confidence 11233456899999999854333 22245555654 443321 11122222223 33357788888888776664
Q ss_pred HHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEE-e-cccC-CCCHHHHHHHHHH
Q 016053 218 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII-N-SVSR-GKGQDLFLHSFYE 294 (396)
Q Consensus 218 ~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~v-G-~l~~-~Kg~~~li~a~~~ 294 (396)
.+ .| .+..++.|++-.+..... .++.+.|+++|+++++++|+++ | |..+ .|++..++++++.
T Consensus 154 ~~-----~g---~~~~~vGnPv~~~~~~~~-------~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~ 218 (385)
T TIGR00215 154 QK-----KN---VPCRFVGHPLLDAIPLYK-------PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQL 218 (385)
T ss_pred Hh-----cC---CCEEEECCchhhhccccC-------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHH
Confidence 42 23 246678888733321100 0134568889998887777665 3 5555 6899999999988
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
+.+ +.|++++++++... ...+.+++..++++...+|.+.+. ++..+|++||++|.+|- .+
T Consensus 219 l~~-------~~p~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~aADl~V~~SG-------t~ 278 (385)
T TIGR00215 219 LEQ-------QEPDLRRVLPVVNF----KRRLQFEQIKAEYGPDLQLHLIDG--DARKAMFAADAALLASG-------TA 278 (385)
T ss_pred HHH-------hCCCeEEEEEeCCc----hhHHHHHHHHHHhCCCCcEEEECc--hHHHHHHhCCEEeecCC-------HH
Confidence 765 33788887765332 244556666666665556766653 67889999999999884 67
Q ss_pred HHHHHhcCCCEEEcCC
Q 016053 375 TIEAMAFQLPVLVLSE 390 (396)
Q Consensus 375 ~lEAma~G~PVI~t~~ 390 (396)
.+|+|++|+|+|...-
T Consensus 279 tlEa~a~G~P~Vv~yk 294 (385)
T TIGR00215 279 ALEAALIKTPMVVGYR 294 (385)
T ss_pred HHHHHHcCCCEEEEEc
Confidence 7799999999988743
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=129.17 Aligned_cols=237 Identities=11% Similarity=0.069 Sum_probs=145.9
Q ss_pred CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC-cEEEEcCchhh
Q 016053 84 LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA-DLIVLNTAVAG 162 (396)
Q Consensus 84 ~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-DiV~~~~~~~~ 162 (396)
....|+.+.-.+..+.+.+.|+++.-+..-.... .. ..+... ....+....++ |+||.++|...
T Consensus 12 ~~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~-~~----~~~~~~----------~~~~~~~~~~~~Dvv~~~~P~~~ 76 (333)
T PRK09814 12 SGNSAALKAKNDVTKIAKQLGFEELGIYFYNIKR-DS----LSERSK----------RLDGILASLKPGDIVIFQFPTWN 76 (333)
T ss_pred cccchHHHHHHHHHHHHHHCCCeEeEEEeccccc-ch----HHHHHH----------HHHHHHhcCCCCCEEEEECCCCc
Confidence 3346778999999999999999987665221100 00 000000 00112333455 99999987542
Q ss_pred H-H-----HHHHHhcCCCccccceeeeeeecccccCc------hhhhccccccccceeeccccHHHHHHHHHhhhcccCC
Q 016053 163 K-W-----LDAVLKEDVPRVLPNVLWWIHEMRGHYFK------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP 230 (396)
Q Consensus 163 ~-~-----~~~~~~~~~~~~~~~vv~~~h~~~~~~~~------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~ 230 (396)
. . +..+++. ..++++.+|+....... ......++.+|.+++.|..+.+++. ..|++..
T Consensus 77 ~~~~~~~~~~~~k~~-----~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~~l~-----~~g~~~~ 146 (333)
T PRK09814 77 GFEFDRLFVDKLKKK-----QVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSKKMKDRLV-----EEGLTTD 146 (333)
T ss_pred hHHHHHHHHHHHHHc-----CCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCcC
Confidence 2 1 1122222 35689999987532221 1123456788899999988887765 3477667
Q ss_pred CEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEE
Q 016053 231 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH 310 (396)
Q Consensus 231 k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~ 310 (396)
++.++++..+...... +. ..+.++.|+|+|++...+++. . ..++++
T Consensus 147 ~i~~~~~~~~~~~~~~--------------~~---~~~~~~~i~yaG~l~k~~~l~-------~----------~~~~~~ 192 (333)
T PRK09814 147 KIIVQGIFDYLNDIEL--------------VK---TPSFQKKINFAGNLEKSPFLK-------N----------WSQGIK 192 (333)
T ss_pred ceEecccccccccccc--------------cc---cccCCceEEEecChhhchHHH-------h----------cCCCCe
Confidence 7777765543321110 00 113456899999998432111 0 016899
Q ss_pred EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCC---------CCCCccHHHHHHH
Q 016053 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA---------WGECFGRITIEAM 379 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~---------~~E~fg~~~lEAm 379 (396)
|+|+|+|+.. + ...++|+|+|++ +++..+|+. |+.+.+... ..-.+|.++.|+|
T Consensus 193 l~i~G~g~~~-----~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ym 257 (333)
T PRK09814 193 LTVFGPNPED-----L---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYL 257 (333)
T ss_pred EEEECCCccc-----c---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHH
Confidence 9999998621 1 234789999986 789999988 665543320 0135788999999
Q ss_pred hcCCCEEEcCCCCCC
Q 016053 380 AFQLPVLVLSELHPS 394 (396)
Q Consensus 380 a~G~PVI~t~~gG~~ 394 (396)
|||+|||+++.++.+
T Consensus 258 A~G~PVI~~~~~~~~ 272 (333)
T PRK09814 258 AAGLPVIVWSKAAIA 272 (333)
T ss_pred HCCCCEEECCCccHH
Confidence 999999999988754
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-14 Score=116.65 Aligned_cols=101 Identities=26% Similarity=0.301 Sum_probs=76.1
Q ss_pred CEEEEEEecccCCCCHHHHHH-HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 270 DLLFAIINSVSRGKGQDLFLH-SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~-a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
-+.|+++|++.+.|+++.+++ ++.++.+. .|+++|+|+|.++ . ++++. ..++|+++|+.+
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~-------~p~~~l~i~G~~~-----~--~l~~~-----~~~~v~~~g~~~ 62 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEK-------HPDIELIIIGNGP-----D--ELKRL-----RRPNVRFHGFVE 62 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHH-------STTEEEEEECESS--------HHCCH-----HHCTEEEE-S-H
T ss_pred cccccccccccccccccchhhhHHHHHHHH-------CcCEEEEEEeCCH-----H--HHHHh-----cCCCEEEcCCHH
Confidence 367899999999999999999 99988763 4899999999976 2 23333 225899999998
Q ss_pred CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 349 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 349 ~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
++.++++.||+++.|+.. .++++.+++|||++|+|||+++.
T Consensus 63 e~~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH
T ss_pred HHHHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc
Confidence 999999999999999863 67999999999999999999987
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=126.91 Aligned_cols=136 Identities=26% Similarity=0.344 Sum_probs=112.0
Q ss_pred CEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCC--CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCC
Q 016053 231 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE--DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS 308 (396)
Q Consensus 231 k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~--~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~ 308 (396)
+..+++++++.+.+... ...+..+ ...++++|++.+.||++.+++++..+... .++
T Consensus 173 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~-------~~~ 230 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA---------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKR-------GPD 230 (381)
T ss_pred CceEecCCcCHHHcCcc---------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhh-------cCC
Confidence 68999999998877531 1222233 37999999999999999999999998652 245
Q ss_pred EEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC--CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 309 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 309 ~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~--~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
.+++++|.+... .+.+.+.+.+.+..+++.|+|... ++..+++.+|++++||. .|+||++++|||++|+|||
T Consensus 231 ~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi 304 (381)
T COG0438 231 IKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSL--SEGFGLVLLEAMAAGTPVI 304 (381)
T ss_pred eEEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccc--cccchHHHHHHHhcCCcEE
Confidence 899999998622 356666888888888999999874 78889999999999999 8999999999999999999
Q ss_pred EcCCCCCC
Q 016053 387 VLSELHPS 394 (396)
Q Consensus 387 ~t~~gG~~ 394 (396)
+++.+|..
T Consensus 305 ~~~~~~~~ 312 (381)
T COG0438 305 ASDVGGIP 312 (381)
T ss_pred ECCCCChH
Confidence 99998754
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=134.06 Aligned_cols=234 Identities=11% Similarity=0.063 Sum_probs=138.2
Q ss_pred CCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--C-----chhhhccccccccceeeccccHHHHHHHHH
Q 016053 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--F-----KLDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.=|+|++|+......-..+.+ ..|. .++-++.|...+.. | .....+-+..+|.+-..+......+.....
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~-~~p~--~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~ 307 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKE-YNSN--MKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACT 307 (934)
T ss_pred CCCEEEEecchhhHHHHHHHH-hCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHH
Confidence 348999999655444444444 3443 45777788652111 0 111222222334333333333333333332
Q ss_pred hhhccc-----------CCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHH
Q 016053 223 ERLRIK-----------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291 (396)
Q Consensus 223 ~~~g~~-----------~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a 291 (396)
+..|.+ .-++.+.|.|||.+.|........-....++++++++ ++.+|+.++|+++.||+...++|
T Consensus 308 rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDRLD~~KGI~~kL~A 384 (934)
T PLN03064 308 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVDRLDMIKGIPQKILA 384 (934)
T ss_pred HHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeeccccccCHHHHHHH
Confidence 222321 1236678999999999765333222333467788775 56799999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHH----HHHHHHhcC----CC--CcEEEecC---cCCHHHHHHHcC
Q 016053 292 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE----LRNYVMQKK----IQ--DRVHFVNK---TLTVAPYLAAID 358 (396)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~----l~~~~~~~~----l~--~~V~~~g~---~~~~~~~~~~aD 358 (396)
|+.+.+..++. ..++.|+-+....-.+.+.+++ +.+++.+.+ -. .-|+++.. .+++..+|+.||
T Consensus 385 fE~fL~~~Pe~---r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~AD 461 (934)
T PLN03064 385 FEKFLEENPEW---RDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTD 461 (934)
T ss_pred HHHHHHhCccc---cCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCC
Confidence 99987644321 0123344333221111123333 444333322 11 12455443 278999999999
Q ss_pred EEEecCCCCCCCccHHHHHHHhcCC----CEEEcCCCCCC
Q 016053 359 VLVQNSQAWGECFGRITIEAMAFQL----PVLVLSELHPS 394 (396)
Q Consensus 359 v~v~pS~~~~E~fg~~~lEAma~G~----PVI~t~~gG~~ 394 (396)
|++.||. .|||+++..|+|+|+. ++|.|...|++
T Consensus 462 V~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 462 VALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred EEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 9999999 9999999999999944 44448888875
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-13 Score=116.00 Aligned_cols=157 Identities=13% Similarity=0.029 Sum_probs=81.3
Q ss_pred EEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhh-hhhhhhhh-hhcceEE---EEcCchhhhhhccC
Q 016053 77 VLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEV-IYSLEHKM-WDRGVQV---ISAKGQETINTALK 150 (396)
Q Consensus 77 Il~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~-~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~ 150 (396)
|+++... ...||+++++.+++++|+++||+|++++.......... ........ ....... ..........+..+
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEK 80 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcC
Confidence 4455544 45599999999999999999999999995544321111 00000000 0000000 00011223445579
Q ss_pred CcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccc-------ccCchh------hhccccccccceeeccccHHHH
Q 016053 151 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-------HYFKLD------YVKHLPLVAGAMIDSHVTAEYW 217 (396)
Q Consensus 151 ~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~-------~~~~~~------~~~~~~~~~~~~~~s~~~~~~~ 217 (396)
+|+||+|......+...... . .+.+++.|+... ...... .....+..+.++++|..+++.+
T Consensus 81 ~DiVh~~~~~~~~~~~~~~~-~-----~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l 154 (177)
T PF13439_consen 81 PDIVHIHGPPAFWIALLACR-K-----VPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDEL 154 (177)
T ss_dssp -SEEECCTTHCCCHHHHHHH-C-----SCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHH
T ss_pred CCeEEecccchhHHHHHhcc-C-----CCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHH
Confidence 99999999655443333333 3 458888998641 000000 1122356788888888877765
Q ss_pred HHHHHhhhcccCCCEEEEecCCccchh
Q 016053 218 KNRTRERLRIKMPDTYVVHLGNSKELM 244 (396)
Q Consensus 218 ~~~~~~~~g~~~~k~~vI~ngid~~~~ 244 (396)
.+ +|++++++.|||||+|.+.|
T Consensus 155 ~~-----~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 155 IK-----FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HH-----HT--SS-EEE----B-CCCH
T ss_pred HH-----hCCcccCCEEEECCccHHHc
Confidence 53 67888999999999999987
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-10 Score=108.80 Aligned_cols=253 Identities=15% Similarity=0.112 Sum_probs=143.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc-----Cc--------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-----KG-------- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------- 141 (396)
+||++.+ ...||.-.-...+++.|+++||+|.+++.....+.. .+...|+.+..+ ..
T Consensus 2 ~~i~~~~--GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~--------l~~~~g~~~~~~~~~~l~~~~~~~~~~ 71 (352)
T PRK12446 2 KKIVFTG--GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT--------IIEKENIPYYSISSGKLRRYFDLKNIK 71 (352)
T ss_pred CeEEEEc--CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc--------cCcccCCcEEEEeccCcCCCchHHHHH
Confidence 4677776 344666688889999999999999999855542211 111223322111 11
Q ss_pred -----------hhhhhhccCCcEEEEcCchhh-HHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 142 -----------QETINTALKADLIVLNTAVAG-KWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 142 -----------~~~~~~~~~~DiV~~~~~~~~-~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
...+.+..+||+||.+..... .....+...++|. .+|+... ....-.+.+......++.
T Consensus 72 ~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~-------~i~e~n~--~~g~~nr~~~~~a~~v~~ 142 (352)
T PRK12446 72 DPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPV-------LLHESDM--TPGLANKIALRFASKIFV 142 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCE-------EEECCCC--CccHHHHHHHHhhCEEEE
Confidence 012345689999999885432 3334445555542 3566532 222222333333333333
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
+.... ..+++.+++.+..|++..+..... ++..++.+++++++++|+.+|.= .|-..+-
T Consensus 143 ~f~~~---------~~~~~~~k~~~tG~Pvr~~~~~~~---------~~~~~~~~~l~~~~~~iLv~GGS---~Ga~~in 201 (352)
T PRK12446 143 TFEEA---------AKHLPKEKVIYTGSPVREEVLKGN---------REKGLAFLGFSRKKPVITIMGGS---LGAKKIN 201 (352)
T ss_pred Eccch---------hhhCCCCCeEEECCcCCccccccc---------chHHHHhcCCCCCCcEEEEECCc---cchHHHH
Confidence 32111 112445678888888876553211 34456778888777777777652 2333344
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCc-CCHHHHHHHcCEEEecCCCC
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-LTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~-~~~~~~~~~aDv~v~pS~~~ 367 (396)
+++..+.+.+. .++++++ .|... +.+...+ . +++...++. +++.++|++||++|.-
T Consensus 202 ~~~~~~l~~l~------~~~~vv~~~G~~~-----~~~~~~~----~---~~~~~~~f~~~~m~~~~~~adlvIsr---- 259 (352)
T PRK12446 202 ETVREALPELL------LKYQIVHLCGKGN-----LDDSLQN----K---EGYRQFEYVHGELPDILAITDFVISR---- 259 (352)
T ss_pred HHHHHHHHhhc------cCcEEEEEeCCch-----HHHHHhh----c---CCcEEecchhhhHHHHHHhCCEEEEC----
Confidence 44443332221 2466555 45431 2222221 1 234556877 7899999999999943
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+-+.++.|++++|+|.|.....
T Consensus 260 --~G~~t~~E~~~~g~P~I~iP~~ 281 (352)
T PRK12446 260 --AGSNAIFEFLTLQKPMLLIPLS 281 (352)
T ss_pred --CChhHHHHHHHcCCCEEEEcCC
Confidence 4478999999999999988553
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-09 Score=99.35 Aligned_cols=253 Identities=15% Similarity=0.157 Sum_probs=147.7
Q ss_pred EEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc----------hh
Q 016053 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----------QE 143 (396)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 143 (396)
||+|....... .|.-.+...||++|+++|++|.+++...+. .+.+.+...|++++.... ..
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~-------~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~ 73 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGAEVAFACKPLPG-------DLIDLLLSAGFPVYELPDESSRYDDALELI 73 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCH-------HHHHHHHHcCCeEEEecCCCchhhhHHHHH
Confidence 46666654333 444599999999999999999999965432 134456667777765533 22
Q ss_pred hhhhccCCcEEEEcCc-hhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHH
Q 016053 144 TINTALKADLIVLNTA-VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.+.+..+||+|++... ....|...++..+ ++++ .+.+.....+ .+|.++..... .+...
T Consensus 74 ~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~-----~~l~-~iDD~~~~~~---------~~D~vin~~~~-~~~~~---- 133 (279)
T TIGR03590 74 NLLEEEKFDILIVDHYGLDADWEKLIKEFG-----RKIL-VIDDLADRPH---------DCDLLLDQNLG-ADASD---- 133 (279)
T ss_pred HHHHhcCCCEEEEcCCCCCHHHHHHHHHhC-----CeEE-EEecCCCCCc---------CCCEEEeCCCC-cCHhH----
Confidence 3344568999988874 3344544444332 2222 2333311111 23333333222 11111
Q ss_pred hhhc-ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHh
Q 016053 223 ERLR-IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKE 301 (396)
Q Consensus 223 ~~~g-~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~ 301 (396)
..+ .+... ....|++.-...+..... ......+ ++.+.+++++|...+.+....+++++.++.
T Consensus 134 -y~~~~~~~~--~~l~G~~Y~~lr~eF~~~----~~~~~~~----~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~----- 197 (279)
T TIGR03590 134 -YQGLVPANC--RLLLGPSYALLREEFYQL----ATANKRR----KPLRRVLVSFGGADPDNLTLKLLSALAESQ----- 197 (279)
T ss_pred -hcccCcCCC--eEEecchHHhhhHHHHHh----hHhhhcc----cccCeEEEEeCCcCCcCHHHHHHHHHhccc-----
Confidence 112 22232 334465433332211000 0000111 123457788888777776778888887642
Q ss_pred hccCCCCEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh
Q 016053 302 KKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 380 (396)
Q Consensus 302 ~~~~~~~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma 380 (396)
.+++ .+|+|.+. +..+++++.++.. +++++.++++++.++|++||++|.+ .|.++.|+++
T Consensus 198 -----~~~~i~vv~G~~~----~~~~~l~~~~~~~---~~i~~~~~~~~m~~lm~~aDl~Is~-------~G~T~~E~~a 258 (279)
T TIGR03590 198 -----INISITLVTGSSN----PNLDELKKFAKEY---PNIILFIDVENMAELMNEADLAIGA-------AGSTSWERCC 258 (279)
T ss_pred -----cCceEEEEECCCC----cCHHHHHHHHHhC---CCEEEEeCHHHHHHHHHHCCEEEEC-------CchHHHHHHH
Confidence 2333 33777764 2456777777653 4799999999999999999999963 3589999999
Q ss_pred cCCCEEEcCC
Q 016053 381 FQLPVLVLSE 390 (396)
Q Consensus 381 ~G~PVI~t~~ 390 (396)
+|+|+|+...
T Consensus 259 ~g~P~i~i~~ 268 (279)
T TIGR03590 259 LGLPSLAICL 268 (279)
T ss_pred cCCCEEEEEe
Confidence 9999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.24 E-value=8e-09 Score=92.23 Aligned_cols=283 Identities=15% Similarity=0.127 Sum_probs=171.9
Q ss_pred ChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhh-----------------------
Q 016053 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQET----------------------- 144 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 144 (396)
|-.-++..-|..|++.|++|+++.-.++. +.++.+....++++.......
T Consensus 24 GRSPRMqYHA~Sla~~gf~VdliGy~~s~-------p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~ 96 (444)
T KOG2941|consen 24 GRSPRMQYHALSLAKLGFQVDLIGYVESI-------PLEELLNHPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLW 96 (444)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEEecCCC-------ChHHHhcCCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHH
Confidence 33456777788999999999999833321 144445555677766543321
Q ss_pred -hhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccc-c--Cchh-------hhccc-----ccccccee
Q 016053 145 -INTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH-Y--FKLD-------YVKHL-----PLVAGAMI 208 (396)
Q Consensus 145 -~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~-~--~~~~-------~~~~~-----~~~~~~~~ 208 (396)
+.-...+|++...+|.+...+..+.-... ..+++.+..-|++... . ++.. ..+++ +.++...|
T Consensus 97 aL~~~~~~~~ilvQNPP~iPtliv~~~~~~-l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLc 175 (444)
T KOG2941|consen 97 ALFVLRPPDIILVQNPPSIPTLIVCVLYSI-LTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLC 175 (444)
T ss_pred HHHhccCCcEEEEeCCCCCchHHHHHHHHH-HhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchh
Confidence 11238899999998654433222221100 1125567677776211 0 0000 11111 24445555
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCC-----ccch----hhhhhh---------hHHHHHhHHHHHHHcC-----
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-----SKEL----MEVAED---------NVAKRVLREHVRESLG----- 265 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-----d~~~----~~~~~~---------~~~~~~~~~~~r~~~g----- 265 (396)
++.++++ .+.+.+|+. +..|+|.-. +.+. |.+... +.++..++..+-++..
T Consensus 176 VT~AMr~----dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~ 249 (444)
T KOG2941|consen 176 VTKAMRE----DLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQ 249 (444)
T ss_pred hHHHHHH----HHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhh
Confidence 5555544 444477764 355555221 1111 322211 1111222222333332
Q ss_pred -CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 266 -VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 266 -~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
.++...+++..-+..+..++..+++|+...-+.....+...|++-++|-|.|+ ..+...+.++++.++ +|.+.
T Consensus 250 ~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-----lkE~Y~~~I~~~~~~-~v~~~ 323 (444)
T KOG2941|consen 250 LLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-----LKEKYSQEIHEKNLQ-HVQVC 323 (444)
T ss_pred hccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-----hhHHHHHHHHHhccc-ceeee
Confidence 23445667777788899999999999986655555545567999999999998 889999999999887 56665
Q ss_pred c-C--cCCHHHHHHHcCEE--EecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 N-K--TLTVAPYLAAIDVL--VQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g-~--~~~~~~~~~~aDv~--v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
- + .+|.+.+++.||+. +.+|.. +=..|++++....||+||+|-+..
T Consensus 324 tpWL~aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fk 374 (444)
T KOG2941|consen 324 TPWLEAEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFK 374 (444)
T ss_pred ecccccccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecch
Confidence 4 3 48999999999975 455553 567899999999999999997753
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-09 Score=97.02 Aligned_cols=256 Identities=18% Similarity=0.138 Sum_probs=151.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCE-EEEEeccCCCCchhhhhhhhhhhhhcceEE--EEcCch----------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTK-VNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQ---------- 142 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~-V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------- 142 (396)
+|++.. ...||.-.-...++++|.++|++ |.++......+.. .....++.+ ++....
T Consensus 2 ~ivl~~--gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~--------l~~~~~~~~~~I~~~~~~~~~~~~~~~ 71 (357)
T COG0707 2 KIVLTA--GGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAF--------LVKQYGIEFELIPSGGLRRKGSLKLLK 71 (357)
T ss_pred eEEEEe--CCCccchhHHHHHHHHHHhhCccEEEEecccccceee--------eccccCceEEEEecccccccCcHHHHH
Confidence 344444 34466678999999999999995 6666432221111 011112222 222111
Q ss_pred ------------hhhhhccCCcEEEEcCc-hhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 143 ------------ETINTALKADLIVLNTA-VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 143 ------------~~~~~~~~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
+.+.+..+||+|+.... .+......+...++| + .+|+. ......-.++.......+..
T Consensus 72 ~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iP-----v--~ihEq--n~~~G~ank~~~~~a~~V~~ 142 (357)
T COG0707 72 APFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIP-----V--IIHEQ--NAVPGLANKILSKFAKKVAS 142 (357)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCC-----E--EEEec--CCCcchhHHHhHHhhceeee
Confidence 23445699999999764 334444455566655 3 36765 33444433444333334433
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
+.... .-+.+.+++.+..|++..+.+. .+. ...+.... .++++|+++|. ..|...+-
T Consensus 143 ~f~~~---------~~~~~~~~~~~tG~Pvr~~~~~-~~~--------~~~~~~~~--~~~~~ilV~GG---S~Ga~~ln 199 (357)
T COG0707 143 AFPKL---------EAGVKPENVVVTGIPVRPEFEE-LPA--------AEVRKDGR--LDKKTILVTGG---SQGAKALN 199 (357)
T ss_pred ccccc---------cccCCCCceEEecCcccHHhhc-cch--------hhhhhhcc--CCCcEEEEECC---cchhHHHH
Confidence 33321 1234566789999998877764 211 11222222 26677777765 34555566
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCC
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGE 369 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E 369 (396)
+++.++...+.+ +++++...+.. ..+++++...+++. +...++.+||.++|++||++|.=
T Consensus 200 ~~v~~~~~~l~~------~~~v~~~~G~~-----~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsR------ 259 (357)
T COG0707 200 DLVPEALAKLAN------RIQVIHQTGKN-----DLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISR------ 259 (357)
T ss_pred HHHHHHHHHhhh------CeEEEEEcCcc-----hHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeC------
Confidence 666655544421 46665555432 35566666666554 88899999999999999999943
Q ss_pred CccHHHHHHHhcCCCEEEcCCCCC
Q 016053 370 CFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 370 ~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+-++++.|..++|+|+|--..+..
T Consensus 260 aGa~Ti~E~~a~g~P~IliP~p~~ 283 (357)
T COG0707 260 AGALTIAELLALGVPAILVPYPPG 283 (357)
T ss_pred CcccHHHHHHHhCCCEEEeCCCCC
Confidence 347999999999999998776654
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-10 Score=109.91 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=113.4
Q ss_pred cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEe-
Q 016053 199 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN- 277 (396)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG- 277 (396)
.+...+.+++.+....+.+.+++.+. . ...++..||.+.- ....... ......+++++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~~~~-~-~~~~v~~Ip~~~~-~~~~~~s------------------~r~~~~~I~v~i 327 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENYREN-Y-VEFDISRITPFDT-RLRLGQS------------------QQLYETEIGFWI 327 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHhhhc-c-cCCcceeeCccce-EEecChh------------------hcccceEEEEEc
Confidence 44566777776666555555544321 0 1234667775533 2111000 12334677788
Q ss_pred -cccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC------------------
Q 016053 278 -SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ------------------ 338 (396)
Q Consensus 278 -~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~------------------ 338 (396)
|+ +.|.++.+|+|+.++.+ ++|+++|.+.|.+.+ .+..+.+++.+++++++
T Consensus 328 drL-~ek~~~~~I~av~~~~~-------~~p~~~L~~~gy~~~--~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 328 DGL-SDEELQQILQQLLQYIL-------KNPDYELKILTYNND--NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred CCC-ChHHHHHHHHHHHHHHh-------hCCCeEEEEEEecCc--hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 99 99999999999999876 459999999998742 23567777887877766
Q ss_pred -----------CcEEEecCcC--CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 339 -----------DRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 339 -----------~~V~~~g~~~--~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
++|.|.|... ++.+.|..+.++|.+|. .|+|+ +.+||++.|+|+|
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI 455 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI 455 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCC--CCChH-HHHHHHHcCCCee
Confidence 7999999886 99999999999999999 99999 9999999999999
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-09 Score=108.28 Aligned_cols=123 Identities=13% Similarity=0.184 Sum_probs=96.7
Q ss_pred CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCcc---chHHHHHHHHHHhcCCCCcEE
Q 016053 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ---TKFESELRNYVMQKKIQDRVH 342 (396)
Q Consensus 266 ~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~---~~~~~~l~~~~~~~~l~~~V~ 342 (396)
++++.+++++++|+..+||++.++.++.++.+.+.. ...++++++.|.+.+.+ .++.+.+.+++++...+++|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~---~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNN---PERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhC---CCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence 457788999999999999999999999988753321 01379999999997543 225666777777655667898
Q ss_pred EecC-c-CCHHHHHHHcCEEEe-cCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 343 FVNK-T-LTVAPYLAAIDVLVQ-NSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 343 ~~g~-~-~~~~~~~~~aDv~v~-pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
|+-. - .-...+++.||++++ ||+. .|.+|++-+-||..|.+.+++--|.
T Consensus 462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~-~EacGtsqMka~~nGgL~~sv~DG~ 513 (601)
T TIGR02094 462 FLENYDINLARYLVSGVDVWLNNPRRP-LEASGTSGMKAAMNGVLNLSILDGW 513 (601)
T ss_pred EEcCCCHHHHHHHhhhheeEEeCCCCC-cCCchHHHHHHHHcCCceeecccCc
Confidence 8754 3 335667899999999 9986 8999999999999999999987644
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.6e-09 Score=99.97 Aligned_cols=231 Identities=19% Similarity=0.221 Sum_probs=119.1
Q ss_pred CCcEE-EEcCchhhHHHHHHHhcCCCccccceeeeeeecc-ccc--------Cch------h--------hhcc------
Q 016053 150 KADLI-VLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR-GHY--------FKL------D--------YVKH------ 199 (396)
Q Consensus 150 ~~DiV-~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~-~~~--------~~~------~--------~~~~------ 199 (396)
+..+| |+|...++..+..+++...+ ...+++.|--. +.+ +.. . +.++
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~---VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraa 218 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPD---VATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAA 218 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-S---CEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCC---eeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHH
Confidence 34444 88888877776766665543 45788888521 111 100 0 0011
Q ss_pred ccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHH-HHHhHHH----HHHHc----CCC-CC
Q 016053 200 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVA-KRVLREH----VRESL----GVR-NE 269 (396)
Q Consensus 200 ~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~-~~~~~~~----~r~~~----g~~-~~ 269 (396)
...++-..++|..++..... .++ ...-.|+|||++.+.|.......+ ....|++ ++..+ .++ ++
T Consensus 219 A~~AdvFTTVSeITa~Ea~~----LL~--r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~ 292 (633)
T PF05693_consen 219 AHYADVFTTVSEITAKEAEH----LLK--RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDK 292 (633)
T ss_dssp HHHSSEEEESSHHHHHHHHH----HHS--S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGG
T ss_pred HHhcCeeeehhhhHHHHHHH----HhC--CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 12444455556666544332 222 222478999999988765432221 1122222 33332 233 34
Q ss_pred CEEEEEEecccC-CCCHHHHHHHHHHHHHHHHhhccCCCCE-EEEEEecCCC----------------------------
Q 016053 270 DLLFAIINSVSR-GKGQDLFLHSFYESLELIKEKKLEVPSV-HAVIIGSDMN---------------------------- 319 (396)
Q Consensus 270 ~~~il~vG~l~~-~Kg~~~li~a~~~l~~~~~~~~~~~~~~-~l~ivG~g~~---------------------------- 319 (396)
.+.|...||..- .||+|.+|+|+..|...++..+.+ ..+ -|+|+-....
T Consensus 293 tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~-~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g 371 (633)
T PF05693_consen 293 TLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSD-KTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIG 371 (633)
T ss_dssp EEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S--EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCC-CeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 566777799874 899999999999997766653211 122 2334332210
Q ss_pred ----------------------------------------------ccchHHHHHHHHHHhcCCCC------cEEEecCc
Q 016053 320 ----------------------------------------------AQTKFESELRNYVMQKKIQD------RVHFVNKT 347 (396)
Q Consensus 320 ----------------------------------------------~~~~~~~~l~~~~~~~~l~~------~V~~~g~~ 347 (396)
-.++..+.+.+.++++++.+ +|+|++.-
T Consensus 372 ~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~y 451 (633)
T PF05693_consen 372 KRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEY 451 (633)
T ss_dssp HHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S-
T ss_pred HHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeecc
Confidence 00011222333444444331 56776631
Q ss_pred ---------CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 ---------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ---------~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
-+..+++..||+.|+||+ +|+||.+.+|+.++|+|.|+||..|
T Consensus 452 L~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 452 LSGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp --TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEETTBH
T ss_pred ccCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeeccchh
Confidence 468899999999999999 9999999999999999999999876
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.8e-10 Score=94.37 Aligned_cols=134 Identities=17% Similarity=0.139 Sum_probs=72.1
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------------hhhh--hcc
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------------ETIN--TAL 149 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~ 149 (396)
||+++++.+++++|.++||+|++++...... .......++.+..+... ..+. ...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 72 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPE--------DDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRE 72 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GG--------G-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT-
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCc--------ccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhcc
Confidence 7899999999999999999999999654421 11122345555332211 1223 458
Q ss_pred CCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeeccccc---Cchh-----hhccccccccceeeccccHHHHHHH
Q 016053 150 KADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEMRGHY---FKLD-----YVKHLPLVAGAMIDSHVTAEYWKNR 220 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~~~~~---~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~ 220 (396)
+||+||+|.+........+. ..+ .|++.++|+..... +... ....+..++.+++.|....+.+.+
T Consensus 73 ~~Dvv~~~~~~~~~~~~~~~~~~~-----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~- 146 (160)
T PF13579_consen 73 RPDVVHAHSPTAGLVAALARRRRG-----IPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR- 146 (160)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-------EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH-
T ss_pred CCeEEEecccchhHHHHHHHHccC-----CcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH-
Confidence 99999999965444444343 334 45888888753111 1111 123456788888888887776553
Q ss_pred HHhhhcccCCCEEEEecC
Q 016053 221 TRERLRIKMPDTYVVHLG 238 (396)
Q Consensus 221 ~~~~~g~~~~k~~vI~ng 238 (396)
+|++++|+.|||||
T Consensus 147 ----~g~~~~ri~vipnG 160 (160)
T PF13579_consen 147 ----YGVPPDRIHVIPNG 160 (160)
T ss_dssp ----H---GGGEEE----
T ss_pred ----hCCCCCcEEEeCcC
Confidence 57888999999998
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.4e-08 Score=98.99 Aligned_cols=124 Identities=14% Similarity=0.133 Sum_probs=97.4
Q ss_pred CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccch---HHHHHHHHHHhcCCCCcEE
Q 016053 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK---FESELRNYVMQKKIQDRVH 342 (396)
Q Consensus 266 ~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~---~~~~l~~~~~~~~l~~~V~ 342 (396)
++++.++|+++.|+..+|+.+.++..+..+.+.+.+ ...+++|++.|.+.+.+.. +.+.+.+++++....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~---~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLND---PERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhC---CCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEE
Confidence 457778999999999999999999999888764432 1136999999999866532 3445666666556677899
Q ss_pred EecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 343 FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 343 ~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
|+..- .-...+++.||+.++||+.-.|.+|.+-+-||.-|.+-+++--|-
T Consensus 551 fle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGw 602 (778)
T cd04299 551 FLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGW 602 (778)
T ss_pred EEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCc
Confidence 98653 335567899999999999657999999999999999999887654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.9e-08 Score=92.69 Aligned_cols=235 Identities=9% Similarity=0.006 Sum_probs=146.3
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-------CchhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+|++|+......-..+.+.+ |. .++-++.|...+.. ......+.+..+|.+-..+......+.+..
T Consensus 122 ~~~D~VWVHDYhL~llp~~LR~~~-~~--~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~ 198 (474)
T PRK10117 122 KDDDIIWIHDYHLLPFASELRKRG-VN--NRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCL 198 (474)
T ss_pred CCCCEEEEeccHhhHHHHHHHHhC-CC--CcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHH
Confidence 344899999976555444444443 32 45777888652111 111122222233333333333333333332
Q ss_pred Hhhhccc------------CCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 222 RERLRIK------------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 222 ~~~~g~~------------~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
.+..|.. .-++.+.|-|||.+.|........ .....+++++++ ++.+|+-+.|++..||+..=+
T Consensus 199 ~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~-~~~~~~lr~~~~---~~~lilgVDRLDytKGi~~rl 274 (474)
T PRK10117 199 SNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPL-PPKLAQLKAELK---NVQNIFSVERLDYSKGLPERF 274 (474)
T ss_pred HHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchH-HHHHHHHHHHcC---CCeEEEEecccccccCHHHHH
Confidence 2222221 123677899999998865433221 223466777775 467888899999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCcc----chHHHHHHHHHHhc----CCCC--cEEEecC---cCCHHHHHHH
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQK----KIQD--RVHFVNK---TLTVAPYLAA 356 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~----~~~~~~l~~~~~~~----~l~~--~V~~~g~---~~~~~~~~~~ 356 (396)
+||+.+.+..++. ..++.|+-+....-.+ .+++.++++++.+. |-.+ -|+++.. .+++..+|+.
T Consensus 275 ~Afe~fL~~~Pe~---~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ 351 (474)
T PRK10117 275 LAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 351 (474)
T ss_pred HHHHHHHHhChhh---cCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHh
Confidence 9999998877664 2467788776432122 12344555555442 2211 2555543 2788999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcCC-----CEEEcCCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQL-----PVLVLSELHPSI 395 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G~-----PVI~t~~gG~~~ 395 (396)
|||++.+|. .+|+-++..|+.||.. .+|.|...|++.
T Consensus 352 ADv~lVTpl--RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~ 393 (474)
T PRK10117 352 SDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 393 (474)
T ss_pred ccEEEeccc--ccccccccchheeeecCCCCccEEEecccchHH
Confidence 999999999 9999999999999976 388888888763
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.5e-08 Score=95.92 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=102.1
Q ss_pred cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc
Q 016053 201 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 280 (396)
Q Consensus 201 ~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~ 280 (396)
.+.+.++.......+.+.++ ++ +..++.++|-|+-.+ +... ......+++++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r----~~-~~~~~~~ip~g~i~~-~~~~-------------------~r~~~~~l~~t~-- 290 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKEL----LD-NEYQEQISQLGYLYP-FKKD-------------------NKYRKQALILTN-- 290 (438)
T ss_pred cccCeEEeCCHHHHHHHHHH----hC-cccCceEEEEEEEEe-eccc-------------------cCCcccEEEECC--
Confidence 56666776665555555543 32 245677888776522 1100 012334555662
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC-CHHHHHHHcCE
Q 016053 281 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-TVAPYLAAIDV 359 (396)
Q Consensus 281 ~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~-~~~~~~~~aDv 359 (396)
+..|++++++.+.+ |+++|.| |.+. +..+.|.++ .++ ++.+.+-|... ++.++|..||+
T Consensus 291 -----s~~I~~i~~Lv~~l-------Pd~~f~I-ga~t----e~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dl 350 (438)
T TIGR02919 291 -----SDQIEHLEEIVQAL-------PDYHFHI-AALT----EMSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDI 350 (438)
T ss_pred -----HHHHHHHHHHHHhC-------CCcEEEE-EecC----cccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccE
Confidence 99999999998755 9999999 7765 224777777 655 46666667665 89999999999
Q ss_pred EEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 360 LVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 360 ~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++..|. .|++++++.||+..|+|+++.+.-
T Consensus 351 yLdin~--~e~~~~al~eA~~~G~pI~afd~t 380 (438)
T TIGR02919 351 YLDINH--GNEILNAVRRAFEYNLLILGFEET 380 (438)
T ss_pred EEEccc--cccHHHHHHHHHHcCCcEEEEecc
Confidence 999999 999999999999999999999875
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-08 Score=96.23 Aligned_cols=236 Identities=13% Similarity=0.098 Sum_probs=128.9
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-------CchhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+|++|+......-..+.+ ..|. .++.++.|...+.. ......+-+..+|.+-..+....+.+....
T Consensus 140 ~~~D~VWVhDYhL~llP~~LR~-~~~~--~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~ 216 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLLPQMLRE-RGPD--ARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCC 216 (474)
T ss_dssp -TT-EEEEESGGGTTHHHHHHH-TT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCcHHHHHHHHHh-hcCC--ceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHH
Confidence 5669999999655444444444 3444 56777888652111 111122223344444444444444444444
Q ss_pred Hhhhccc--C-----------CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHH
Q 016053 222 RERLRIK--M-----------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 288 (396)
Q Consensus 222 ~~~~g~~--~-----------~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~l 288 (396)
.+..|.+ . -++.+.|.|||.+.+.......+-....++++++++ .+..+|+-+.|++..||+..=
T Consensus 217 ~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvDrld~~kGi~~k 294 (474)
T PF00982_consen 217 KRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVDRLDYTKGIPEK 294 (474)
T ss_dssp HHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE--B-GGG-HHHH
T ss_pred HHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEeccchhhcCHHHH
Confidence 4344332 1 237788899999988654332222333567788775 335889999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc----hHHHHHHHHHHh----cCCCC--cEEEecC---cCCHHHHHH
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT----KFESELRNYVMQ----KKIQD--RVHFVNK---TLTVAPYLA 355 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~----~~~~~l~~~~~~----~~l~~--~V~~~g~---~~~~~~~~~ 355 (396)
++|++++.++.++. ..++.|+-++.....+. ++..++.+++.+ +|-.+ -|.++.. .+++..+|+
T Consensus 295 l~Afe~fL~~~P~~---~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~ 371 (474)
T PF00982_consen 295 LRAFERFLERYPEY---RGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYR 371 (474)
T ss_dssp HHHHHHHHHH-GGG---TTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHH
T ss_pred HHHHHHHHHhCcCc---cCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHH
Confidence 99999999988774 25688888876433322 244555555543 33222 2555554 278999999
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCC----EEEcCCCCCC
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLP----VLVLSELHPS 394 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~P----VI~t~~gG~~ 394 (396)
.||+++.+|. .+|+-++..|+.+|..+ +|.|...|++
T Consensus 372 ~aDv~lvTsl--rDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 372 AADVALVTSL--RDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp H-SEEEE--S--SBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred hhhhEEecch--hhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 9999999999 99999999999999876 7777777765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-07 Score=88.09 Aligned_cols=92 Identities=16% Similarity=0.265 Sum_probs=69.0
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
+++.+++++|..... .++++++++ ++..++++|... .+ ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~-----------~~~~~~v~g~~~-------~~--------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL-----------PDYQFIVFGPNA-------AD--------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC-----------CCCeEEEEcCCc-------cc--------ccCCCEEEeecC
Confidence 466788899987555 556666653 678999998652 00 014789999987
Q ss_pred -CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 348 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 348 -~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
+++.+++++||++|..+- -.++.||+++|+|+|.-...|..+
T Consensus 241 ~~~~~~~m~~ad~vIs~~G------~~t~~Ea~~~g~P~l~ip~~~~~E 283 (318)
T PF13528_consen 241 TPDFAELMAAADLVISKGG------YTTISEALALGKPALVIPRPGQDE 283 (318)
T ss_pred hHHHHHHHHhCCEEEECCC------HHHHHHHHHcCCCEEEEeCCCCch
Confidence 899999999999995332 255899999999999998877543
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-06 Score=81.27 Aligned_cols=250 Identities=14% Similarity=0.106 Sum_probs=141.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 142 (396)
|||++-..... .-.++..+++.|.++||+|.+.+.+... ..+.+...|++.......
T Consensus 1 MkIwiDi~~p~---hvhfFk~~I~eL~~~GheV~it~R~~~~--------~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~ 69 (335)
T PF04007_consen 1 MKIWIDITHPA---HVHFFKNIIRELEKRGHEVLITARDKDE--------TEELLDLYGIDYIVIGKHGDSLYGKLLESI 69 (335)
T ss_pred CeEEEECCCch---HHHHHHHHHHHHHhCCCEEEEEEeccch--------HHHHHHHcCCCeEEEcCCCCCHHHHHHHHH
Confidence 46665542222 2378999999999999999999965542 445555666666544321
Q ss_pred ------hhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHH
Q 016053 143 ------ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEY 216 (396)
Q Consensus 143 ------~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 216 (396)
..+....+||++++....... ..+...++| .+....+.+.. ......++.++.+++........
T Consensus 70 ~R~~~l~~~~~~~~pDv~is~~s~~a~--~va~~lgiP-----~I~f~D~e~a~---~~~~Lt~Pla~~i~~P~~~~~~~ 139 (335)
T PF04007_consen 70 ERQYKLLKLIKKFKPDVAISFGSPEAA--RVAFGLGIP-----SIVFNDTEHAI---AQNRLTLPLADVIITPEAIPKEF 139 (335)
T ss_pred HHHHHHHHHHHhhCCCEEEecCcHHHH--HHHHHhCCC-----eEEEecCchhh---ccceeehhcCCeeECCcccCHHH
Confidence 122234799999988765443 233445555 33333332111 11223345667777666665544
Q ss_pred HHHHHHhhhcccCCCEEEE-ecCCccch----hhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc--CCCCHHH-H
Q 016053 217 WKNRTRERLRIKMPDTYVV-HLGNSKEL----MEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS--RGKGQDL-F 288 (396)
Q Consensus 217 ~~~~~~~~~g~~~~k~~vI-~ngid~~~----~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~--~~Kg~~~-l 288 (396)
+. ++|.. + .+. +||++.-- |.|. .++.+++|+++++++++=..... ..+|-.. +
T Consensus 140 ~~-----~~G~~-~--~i~~y~G~~E~ayl~~F~Pd----------~~vl~~lg~~~~~yIvvR~~~~~A~y~~~~~~i~ 201 (335)
T PF04007_consen 140 LK-----RFGAK-N--QIRTYNGYKELAYLHPFKPD----------PEVLKELGLDDEPYIVVRPEAWKASYDNGKKSIL 201 (335)
T ss_pred HH-----hcCCc-C--CEEEECCeeeEEeecCCCCC----------hhHHHHcCCCCCCEEEEEeccccCeeecCccchH
Confidence 33 45544 2 344 78877532 3332 45788999877766654332221 1222222 3
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~ 368 (396)
-+.++. ++++ .+. ++++.... .. ....++.+ +.+....-+...++..||++|-
T Consensus 202 ~~ii~~----L~~~----~~~-vV~ipr~~-----~~---~~~~~~~~----~~i~~~~vd~~~Ll~~a~l~Ig------ 254 (335)
T PF04007_consen 202 PEIIEE----LEKY----GRN-VVIIPRYE-----DQ---RELFEKYG----VIIPPEPVDGLDLLYYADLVIG------ 254 (335)
T ss_pred HHHHHH----HHhh----Cce-EEEecCCc-----ch---hhHHhccC----ccccCCCCCHHHHHHhcCEEEe------
Confidence 333333 3332 233 55565432 11 12233322 4444444566789999999994
Q ss_pred CCccHHHHHHHhcCCCEEEcCCC
Q 016053 369 ECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 369 E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+| |....||...|+|.|++..|
T Consensus 255 ~g-gTMa~EAA~LGtPaIs~~~g 276 (335)
T PF04007_consen 255 GG-GTMAREAALLGTPAISCFPG 276 (335)
T ss_pred CC-cHHHHHHHHhCCCEEEecCC
Confidence 33 36679999999999998644
|
They are found in archaea and some bacteria and have no known function. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-07 Score=78.88 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=92.7
Q ss_pred ccEEEEEecc---CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh-----h-
Q 016053 74 SKLVLLVSHE---LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-----T- 144 (396)
Q Consensus 74 ~~kIl~v~~~---~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~- 144 (396)
|++|+++.+. ...||.|+++.+|+..|.++|++|+|.|...... .......|++++..+..+ .
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~--------~~~~~y~gv~l~~i~~~~~g~~~si 72 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYP--------YKEFEYNGVRLVYIPAPKNGSAESI 72 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCC--------CCCcccCCeEEEEeCCCCCCchHHH
Confidence 4689999876 3349999999999999999999999999543321 112334566665543221 1
Q ss_pred ------------hhh--ccCCcEEEEcCch-hhHHHHHHHhcCCCccccceeeeeeecccccCchhh-------hc----
Q 016053 145 ------------INT--ALKADLIVLNTAV-AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDY-------VK---- 198 (396)
Q Consensus 145 ------------~~~--~~~~DiV~~~~~~-~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~-------~~---- 198 (396)
+.+ ..+.|+++++... ++.++..... ++..+.+++...|+.. |...+| .+
T Consensus 73 ~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~--~~~~g~~v~vN~DGlE--WkR~KW~~~~k~~lk~~E~ 148 (185)
T PF09314_consen 73 IYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRK--LRKKGGKVVVNMDGLE--WKRAKWGRPAKKYLKFSEK 148 (185)
T ss_pred HHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHh--hhhcCCcEEECCCcch--hhhhhcCHHHHHHHHHHHH
Confidence 011 1357899888754 2222222221 1111234676677652 222221 11
Q ss_pred -cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCc
Q 016053 199 -HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS 240 (396)
Q Consensus 199 -~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid 240 (396)
..+..+.++++|....+++.+ +++ ..+..+|++|.|
T Consensus 149 ~avk~ad~lIaDs~~I~~y~~~----~y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 149 LAVKYADRLIADSKGIQDYIKE----RYG--RKKSTFIAYGAD 185 (185)
T ss_pred HHHHhCCEEEEcCHHHHHHHHH----HcC--CCCcEEecCCCC
Confidence 235788899999999888877 444 456899999976
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.4e-06 Score=81.91 Aligned_cols=249 Identities=17% Similarity=0.173 Sum_probs=148.2
Q ss_pred hHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEE-cC-----c-----------------hhhh
Q 016053 89 GPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-AK-----G-----------------QETI 145 (396)
Q Consensus 89 ~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~-----------------~~~~ 145 (396)
|..+..+|+++|++++-++.++.-.++. +...|++.+. .. + ....
T Consensus 10 GD~~ga~Li~~Lk~~~p~~~~~GvGG~~------------M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~ 77 (373)
T PF02684_consen 10 GDLHGARLIRALKARDPDIEFYGVGGPR------------MQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVER 77 (373)
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEechH------------HHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999988778777744431 1222333211 10 0 0122
Q ss_pred hhccCCcEEEEcC-chhhH-HHHHHHhcCCCccccceeeeeeecccccCchhhhcc-ccccccceeeccccHHHHHHHHH
Q 016053 146 NTALKADLIVLNT-AVAGK-WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKH-LPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 146 ~~~~~~DiV~~~~-~~~~~-~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
....+||+++.-+ |..+. ....+++.+.+ .+++|++--. -+.+.....+. -+.+|...+...+-.+++.+
T Consensus 78 ~~~~~pd~vIlID~pgFNlrlak~lk~~~~~---~~viyYI~Pq-vWAWr~~R~~~i~~~~D~ll~ifPFE~~~y~~--- 150 (373)
T PF02684_consen 78 IKEEKPDVVILIDYPGFNLRLAKKLKKRGIP---IKVIYYISPQ-VWAWRPGRAKKIKKYVDHLLVIFPFEPEFYKK--- 150 (373)
T ss_pred HHHcCCCEEEEeCCCCccHHHHHHHHHhCCC---ceEEEEECCc-eeeeCccHHHHHHHHHhheeECCcccHHHHhc---
Confidence 2458999998766 43333 44455555543 2355544421 12233333333 35678888888887777663
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEE-EEeccc-C-CCCHHHHHHHHHHHHHHH
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA-IINSVS-R-GKGQDLFLHSFYESLELI 299 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il-~vG~l~-~-~Kg~~~li~a~~~l~~~~ 299 (396)
.|+ ++..+.|++=. ..... ..+...++.+ +++++++|+ ..|+=. . .+....++++++++.+
T Consensus 151 --~g~---~~~~VGHPl~d-~~~~~-------~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~-- 214 (373)
T PF02684_consen 151 --HGV---PVTYVGHPLLD-EVKPE-------PDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK-- 214 (373)
T ss_pred --cCC---CeEEECCcchh-hhccC-------CCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 453 36677766421 11111 1134556666 766665444 446522 2 4556888888888776
Q ss_pred HhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHH
Q 016053 300 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 379 (396)
Q Consensus 300 ~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm 379 (396)
++|++++++..... ...+.+++...+.+....+.. ...+-.+.+++||+.+..| |.+.+|++
T Consensus 215 -----~~p~l~fvvp~a~~----~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~m~~ad~al~~S-------GTaTLE~A 276 (373)
T PF02684_consen 215 -----QRPDLQFVVPVAPE----VHEELIEEILAEYPPDVSIVI--IEGESYDAMAAADAALAAS-------GTATLEAA 276 (373)
T ss_pred -----hCCCeEEEEecCCH----HHHHHHHHHHHhhCCCCeEEE--cCCchHHHHHhCcchhhcC-------CHHHHHHH
Confidence 45899999887542 233445666665543322222 2356788999999999877 49999999
Q ss_pred hcCCCEEEcCC
Q 016053 380 AFQLPVLVLSE 390 (396)
Q Consensus 380 a~G~PVI~t~~ 390 (396)
.+|+|.|..--
T Consensus 277 l~g~P~Vv~Yk 287 (373)
T PF02684_consen 277 LLGVPMVVAYK 287 (373)
T ss_pred HhCCCEEEEEc
Confidence 99999987543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.5e-07 Score=94.07 Aligned_cols=223 Identities=10% Similarity=0.060 Sum_probs=136.9
Q ss_pred cEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-------CchhhhccccccccceeeccccHHHHHHHHHhh
Q 016053 152 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRER 224 (396)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 224 (396)
|+|++|+......-..+++ ..|. .++-++.|...+.. +.....+-+..+|-+=..+...++.+.....+.
T Consensus 203 d~VWVhDYhL~llP~~LR~-~~~~--~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~ 279 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRK-RFNR--VKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRM 279 (854)
T ss_pred CEEEEeCchhhHHHHHHHh-hCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHH
Confidence 8999999655444333433 3444 45777788652111 111122222344444444444444444333333
Q ss_pred hcccC---------------CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 225 LRIKM---------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 225 ~g~~~---------------~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
.|++. -++.+.|-|||.+.|..............+++++++- +++.+|+-+.|++..||+..=+
T Consensus 280 lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVDrlD~~KGi~~kl 358 (854)
T PLN02205 280 LGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVDDMDIFKGISLKL 358 (854)
T ss_pred hCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEccCcccccCHHHHH
Confidence 33321 2366789999999886543322223334567777753 3567899999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCcc----chHHHHHHHHHHh----cCCC--CcEEEecC---cCCHHHHHHH
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQ----KKIQ--DRVHFVNK---TLTVAPYLAA 356 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~----~~~~~~l~~~~~~----~~l~--~~V~~~g~---~~~~~~~~~~ 356 (396)
+|++++.+..++. ..++.|+-+..-.-.+ .+++.++.+.+.+ +|-. ..|+++.. .+++.++|+.
T Consensus 359 ~A~e~~L~~~P~~---~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ 435 (854)
T PLN02205 359 LAMEQLLMQHPEW---QGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVV 435 (854)
T ss_pred HHHHHHHHhCccc---cCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHh
Confidence 9999998755442 1245677666432111 1233344455543 2221 13666654 2789999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQL 383 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G~ 383 (396)
||+++.++. .+|+-++..|+.+|..
T Consensus 436 ADv~lVT~l--RDGMNLva~Eyia~~~ 460 (854)
T PLN02205 436 AECCLVTAV--RDGMNLIPYEYIISRQ 460 (854)
T ss_pred ccEEEeccc--cccccccchheeEEcc
Confidence 999999999 9999999999999865
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-06 Score=83.44 Aligned_cols=233 Identities=14% Similarity=0.094 Sum_probs=144.7
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccc----------cccccceeeccccHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHL----------PLVAGAMIDSHVTAEYWK 218 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~~ 218 (396)
..=|+|++|+....+.-..+.. ..|. .++.++.|... -.....+.+ ..++.+-..+...+..+.
T Consensus 146 ~~gDiIWVhDYhL~L~P~mlR~-~~~~--~~IgfFlHiPf---PssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~ 219 (486)
T COG0380 146 EPGDIIWVHDYHLLLVPQMLRE-RIPD--AKIGFFLHIPF---PSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFL 219 (486)
T ss_pred CCCCEEEEEechhhhhHHHHHH-hCCC--ceEEEEEeCCC---CCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHH
Confidence 4449999999655444344443 4554 35777777542 112222222 223323233333333333
Q ss_pred HHHHhhhc-------------ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCH
Q 016053 219 NRTRERLR-------------IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQ 285 (396)
Q Consensus 219 ~~~~~~~g-------------~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~ 285 (396)
....+..+ -...++...|-|||...|.........+..-.++++.++ .+..+|+.+.|++.-||+
T Consensus 220 ~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvDRlDy~kGi 297 (486)
T COG0380 220 DLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVDRLDYSKGI 297 (486)
T ss_pred HHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEehhcccccCc
Confidence 22222111 122457789999999988755322221122345666654 347889899999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccch----HHHHHHHHHHhc----CCC--CcEEEecC---cCCHHH
Q 016053 286 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQK----KIQ--DRVHFVNK---TLTVAP 352 (396)
Q Consensus 286 ~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~----~~~~l~~~~~~~----~l~--~~V~~~g~---~~~~~~ 352 (396)
..=+.||+++.+..++. ..++.|+-++....++-+ ++.++++.+.+. |-. .-|+|+-. .+++..
T Consensus 298 ~~rl~Afe~lL~~~Pe~---~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~a 374 (486)
T COG0380 298 PQRLLAFERLLEEYPEW---RGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLA 374 (486)
T ss_pred HHHHHHHHHHHHhChhh---hCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHH
Confidence 99999999999877764 246788888876644433 333444444432 211 13455544 278999
Q ss_pred HHHHcCEEEecCCCCCCCccHHHHHHHhcCC----CEEEcCCCCCC
Q 016053 353 YLAAIDVLVQNSQAWGECFGRITIEAMAFQL----PVLVLSELHPS 394 (396)
Q Consensus 353 ~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~----PVI~t~~gG~~ 394 (396)
+|..||+++.+|. .+|+-++..|+.||-- +.|-|..-|++
T Consensus 375 l~~~aDv~lVtpl--rDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 375 LYRAADVMLVTPL--RDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHhhhceeeeccc--cccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 9999999999999 9999999999999854 77777777765
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-06 Score=84.70 Aligned_cols=93 Identities=15% Similarity=0.103 Sum_probs=61.3
Q ss_pred CCCEEEEEEecccCC---CCHHHHHHHHHHHHHHHHhhccCCCCEEE-EEEecCCCccchHHHHHHHHHHhcCCCCcEEE
Q 016053 268 NEDLLFAIINSVSRG---KGQDLFLHSFYESLELIKEKKLEVPSVHA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 343 (396)
Q Consensus 268 ~~~~~il~vG~l~~~---Kg~~~li~a~~~l~~~~~~~~~~~~~~~l-~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~ 343 (396)
.+..+++..|+.... +-...++++++. .+.++ +.+|... ... ..++++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~------------~~~~~i~~~g~~~-----~~~--------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVAT------------LGQRAILSLGWGG-----LGA--------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHH------------cCCeEEEEccCcc-----ccc--------cCCCCceEE
Confidence 455677778887542 233344444443 24454 4455432 111 245679999
Q ss_pred ecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 344 VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 344 ~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++. +...+|..||++|. .|-..++.||+++|+|+|.....+
T Consensus 293 ~~~~-p~~~ll~~~d~~I~------hgG~~t~~eal~~GvP~v~~P~~~ 334 (401)
T cd03784 293 VDFV-PHDWLLPRCAAVVH------HGGAGTTAAALRAGVPQLVVPFFG 334 (401)
T ss_pred eCCC-CHHHHhhhhheeee------cCCchhHHHHHHcCCCEEeeCCCC
Confidence 9997 47789999999993 334588999999999999987654
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.5e-06 Score=81.01 Aligned_cols=272 Identities=15% Similarity=0.146 Sum_probs=135.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEE-----EEcC---c----
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-----ISAK---G---- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~---- 141 (396)
|||+++...-+-- ..+.-+.++|++ .++++.++........ .... ........++.+ +.+. .
T Consensus 1 ~ki~~v~GtRpe~---iklapv~~~l~~~~~~~~~lv~tGqH~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (365)
T TIGR03568 1 KKICVVTGTRADY---GLLRPLLKALQDDPDLELQLIVTGMHLSP-EYGN-TVNEIEKDGFDIDEKIEILLDSDSNAGMA 75 (365)
T ss_pred CeEEEEEecChhH---HHHHHHHHHHhcCCCCcEEEEEeCCCCCh-hhcc-HHHHHHHcCCCCCCccccccCCCCCCCHH
Confidence 4788887432222 367788888887 4789888874433211 0000 001111112211 1111 1
Q ss_pred ---------hhhhhhccCCcEEEEcCch-h-hHHHHHHHhcCCCccccceeeeeeecc-cccCchhhhc-ccccc-ccce
Q 016053 142 ---------QETINTALKADLIVLNTAV-A-GKWLDAVLKEDVPRVLPNVLWWIHEMR-GHYFKLDYVK-HLPLV-AGAM 207 (396)
Q Consensus 142 ---------~~~~~~~~~~DiV~~~~~~-~-~~~~~~~~~~~~~~~~~~vv~~~h~~~-~~~~~~~~~~-~~~~~-~~~~ 207 (396)
...+....+||+|++++-. . ......+...++| ++ ++|... ..-......+ ...+. +..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IP-----v~-HveaG~rs~~~~eE~~r~~i~~la~l~f 149 (365)
T TIGR03568 76 KSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIP-----IA-HIHGGEVTEGAIDESIRHAITKLSHLHF 149 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCc-----EE-EEECCccCCCCchHHHHHHHHHHHhhcc
Confidence 1233456899999999832 2 2223345566666 22 344331 1111111111 11121 2222
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCC-CEEEEEEeccc--CCC
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINSVS--RGK 283 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~-~~~il~vG~l~--~~K 283 (396)
+..... .+++. +.|.++.++.++.|.. |.-.. ... ..++++.+++|++.+ +++++.+-+-. ...
T Consensus 150 ~~t~~~----~~~L~-~eg~~~~~i~~tG~~~iD~l~~-~~~------~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~ 217 (365)
T TIGR03568 150 VATEEY----RQRVI-QMGEDPDRVFNVGSPGLDNILS-LDL------LSKEELEEKLGIDLDKPYALVTFHPVTLEKES 217 (365)
T ss_pred CCCHHH----HHHHH-HcCCCCCcEEEECCcHHHHHHh-hhc------cCHHHHHHHhCCCCCCCEEEEEeCCCcccccC
Confidence 222222 22222 4577778888887643 33211 110 124567888998643 55555554432 333
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCC-CccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEE
Q 016053 284 GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-NAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVL 360 (396)
Q Consensus 284 g~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~-~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~ 360 (396)
..+.+.+.++.+.+. ..++ +++.+.. +.+....+.+++...+ .++|.+++.. .++..+++.||++
T Consensus 218 ~~~~l~~li~~L~~~-------~~~~--~vi~P~~~p~~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a~~v 285 (365)
T TIGR03568 218 AEEQIKELLKALDEL-------NKNY--IFTYPNADAGSRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLLKNADAV 285 (365)
T ss_pred chHHHHHHHHHHHHh-------ccCC--EEEEeCCCCCchHHHHHHHHHhcC---CCCEEEECCCChHHHHHHHHhCCEE
Confidence 333444444443321 0234 3343221 1222233444444221 3579999975 7899999999999
Q ss_pred EecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 361 VQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 361 v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
|-.|. |.. .||.++|+|||+-
T Consensus 286 itdSS------ggi-~EA~~lg~Pvv~l 306 (365)
T TIGR03568 286 IGNSS------SGI-IEAPSFGVPTINI 306 (365)
T ss_pred EEcCh------hHH-HhhhhcCCCEEee
Confidence 95553 333 8999999999964
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.3e-06 Score=78.78 Aligned_cols=269 Identities=17% Similarity=0.127 Sum_probs=144.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh--hhhhcce-EEEE-cCc-------hh
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH--KMWDRGV-QVIS-AKG-------QE 143 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~-~~~-------~~ 143 (396)
+||.++..+.+. ...-..|.++|+++=-++.++.-.++.-.......+.+ .+.-.|+ .++. +.. ..
T Consensus 2 ~ki~i~AGE~SG---DllGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~~ 78 (381)
T COG0763 2 LKIALSAGEASG---DLLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRRELV 78 (381)
T ss_pred ceEEEEecccch---hhHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 588888855432 47778899999987226666653332100000000000 0010110 0000 000 01
Q ss_pred hhhhccCCcEEEEcC-chhhH-HHHHHHhcCCCccccceeeeeeecccccCchh-hhccccccccceeeccccHHHHHHH
Q 016053 144 TINTALKADLIVLNT-AVAGK-WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-YVKHLPLVAGAMIDSHVTAEYWKNR 220 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~-~~~~~-~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~ 220 (396)
......+||++++-+ |-... ....+++.+ |. .|+++++--. -+.|+.. .....+..|.+.+...+-..++.
T Consensus 79 ~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~-p~--i~iihYV~Ps-VWAWr~~Ra~~i~~~~D~lLailPFE~~~y~-- 152 (381)
T COG0763 79 RYILANKPDVLILIDSPDFNLRVAKKLRKAG-PK--IKIIHYVSPS-VWAWRPKRAVKIAKYVDHLLAILPFEPAFYD-- 152 (381)
T ss_pred HHHHhcCCCEEEEeCCCCCchHHHHHHHHhC-CC--CCeEEEECcc-eeeechhhHHHHHHHhhHeeeecCCCHHHHH--
Confidence 112358999998776 43333 333344443 32 2233333211 1223322 34455678888888888777765
Q ss_pred HHhhhcccCCCEEEEecCCc-cchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEE-EEecccC--CCCHHHHHHHHHHHH
Q 016053 221 TRERLRIKMPDTYVVHLGNS-KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA-IINSVSR--GKGQDLFLHSFYESL 296 (396)
Q Consensus 221 ~~~~~g~~~~k~~vI~ngid-~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il-~vG~l~~--~Kg~~~li~a~~~l~ 296 (396)
++|.+ ...|.|..- ...+. .+++.+|+++|++.+..+++ ..|+=.. .+....+++|+.++.
T Consensus 153 ---k~g~~---~~yVGHpl~d~i~~~---------~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~ 217 (381)
T COG0763 153 ---KFGLP---CTYVGHPLADEIPLL---------PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK 217 (381)
T ss_pred ---hcCCC---eEEeCChhhhhcccc---------ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH
Confidence 45544 556666542 22222 23667999999987665444 4454211 344455555555554
Q ss_pred HHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHH
Q 016053 297 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT 375 (396)
Q Consensus 297 ~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~-~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~ 375 (396)
+ ++|+.++++--... ..+.++....+. .....+++.+ .+-.+.+.+||+.+..| |.+.
T Consensus 218 ~-------~~~~~~~vlp~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aS-------GT~t 276 (381)
T COG0763 218 A-------RYPDLKFVLPLVNA-----KYRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAAS-------GTAT 276 (381)
T ss_pred h-------hCCCceEEEecCcH-----HHHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhc-------cHHH
Confidence 4 45899999987653 333333333322 2112222222 34578999999998766 4999
Q ss_pred HHHHhcCCCEEEc
Q 016053 376 IEAMAFQLPVLVL 388 (396)
Q Consensus 376 lEAma~G~PVI~t 388 (396)
+|+|.+|+|.|++
T Consensus 277 LE~aL~g~P~Vv~ 289 (381)
T COG0763 277 LEAALAGTPMVVA 289 (381)
T ss_pred HHHHHhCCCEEEE
Confidence 9999999999875
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-06 Score=83.72 Aligned_cols=270 Identities=14% Similarity=0.093 Sum_probs=157.2
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--h---hhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--Q---ETI 145 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~ 145 (396)
..++.||.++++.+..-........+.+++.+..+||..+....+..+ . +.+.+.-.--..++... . ..-
T Consensus 256 ~~~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~d-a----l~~rI~a~~~~~~~~~~~dd~e~a~~ 330 (620)
T COG3914 256 NGKRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTD-A----LQERISAAVEKWYPIGRMDDAEIANA 330 (620)
T ss_pred cccceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecCCCCch-h----HHHHHHHhhhheeccCCcCHHHHHHH
Confidence 345679999999877765568888888988888899999885533221 1 22222222223344332 1 112
Q ss_pred hhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeec----cccHHHHHHHH
Q 016053 146 NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDS----HVTAEYWKNRT 221 (396)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~~~~~~~ 221 (396)
....++||.+--+....--.......+ | .|+..+.-++.+.. ..+..+.++..- .....++.+++
T Consensus 331 I~~d~IdILvDl~g~T~d~r~~v~A~R-p---APiqvswlGy~aT~-------g~p~~DY~I~D~y~vPp~ae~yysEkl 399 (620)
T COG3914 331 IRTDGIDILVDLDGHTVDTRCQVFAHR-P---APIQVSWLGYPATT-------GSPNMDYFISDPYTVPPTAEEYYSEKL 399 (620)
T ss_pred HHhcCCeEEEeccCceeccchhhhhcC-C---CceEEeeccccccc-------CCCcceEEeeCceecCchHHHHHHHHH
Confidence 234677877543321110001111111 1 22222111111000 112233333322 34445555543
Q ss_pred HhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHh
Q 016053 222 RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKE 301 (396)
Q Consensus 222 ~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~ 301 (396)
. .++ -.+-++| .+.+...+ --|.++|++++.+++++.++ ..|-...+.+.-.++.+
T Consensus 400 ~---RLp-----~cy~p~d--~~~~v~p~--------~sR~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL~---- 455 (620)
T COG3914 400 W---RLP-----QCYQPVD--GFEPVTPP--------PSRAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQILS---- 455 (620)
T ss_pred H---hcc-----cccCCCC--CcccCCCC--------cchhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHHH----
Confidence 3 122 1122222 22221111 13788999888777766655 57777777766666555
Q ss_pred hccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC-CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 302 KKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 302 ~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
..|+-.|++.|.|+ +.+....+++.+++.|+. ++..|.+.. ++..+.|..||+++-+. .-+-..+.+||
T Consensus 456 ---~vP~Svl~L~~~~~--~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTy---PY~g~TTa~da 527 (620)
T COG3914 456 ---AVPNSVLLLKAGGD--DAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTY---PYGGHTTASDA 527 (620)
T ss_pred ---hCCCcEEEEecCCC--cHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecc---cCCCccchHHH
Confidence 34899999999874 335788999999999987 799999985 67889999999999754 35667889999
Q ss_pred HhcCCCEEEc
Q 016053 379 MAFQLPVLVL 388 (396)
Q Consensus 379 ma~G~PVI~t 388 (396)
+-+|+|||+-
T Consensus 528 Lwm~vPVlT~ 537 (620)
T COG3914 528 LWMGVPVLTR 537 (620)
T ss_pred HHhcCceeee
Confidence 9999999963
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.9e-06 Score=79.79 Aligned_cols=194 Identities=13% Similarity=0.029 Sum_probs=112.5
Q ss_pred CCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--------------Cchhh------hccc-ccccccee
Q 016053 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--------------FKLDY------VKHL-PLVAGAMI 208 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--------------~~~~~------~~~~-~~~~~~~~ 208 (396)
+||+|+...... .+..+...++|. +++-.|+....+ +.... .+.. +.++.+.+
T Consensus 93 ~p~~v~~~Gg~v--~~~aA~~~~~p~----~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~~ 166 (396)
T TIGR03492 93 KGDLIVAVGDIV--PLLFAWLSGKPY----AFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVFV 166 (396)
T ss_pred cCCEEEEECcHH--HHHHHHHcCCCc----eEEEeeccceeecCCCCCccchhhhccCCCccCHHHHHHhhchhhCEEeC
Confidence 999999988655 334455567664 343446542110 01111 2222 23333444
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCC-EEEEEEeccc--CCCCH
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAIINSVS--RGKGQ 285 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~-~~il~vG~l~--~~Kg~ 285 (396)
....+.+++. +.|. ++.++.|++-....... + . +++++. .+++.-|+-. ..+++
T Consensus 167 ~~~~t~~~l~-----~~g~---k~~~vGnPv~d~l~~~~---------~----~--~l~~~~~~lllLpGSR~ae~~~~l 223 (396)
T TIGR03492 167 RDRLTARDLR-----RQGV---RASYLGNPMMDGLEPPE---------R----K--PLLTGRFRIALLPGSRPPEAYRNL 223 (396)
T ss_pred CCHHHHHHHH-----HCCC---eEEEeCcCHHhcCcccc---------c----c--ccCCCCCEEEEECCCCHHHHHccH
Confidence 4444444433 3333 57777777633221100 0 1 444443 3444445542 25678
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCEEEEEEe-cCCCccchHHHHHHHHHHhcCCC--------------CcEEEecCcCCH
Q 016053 286 DLFLHSFYESLELIKEKKLEVPSVHAVIIG-SDMNAQTKFESELRNYVMQKKIQ--------------DRVHFVNKTLTV 350 (396)
Q Consensus 286 ~~li~a~~~l~~~~~~~~~~~~~~~l~ivG-~g~~~~~~~~~~l~~~~~~~~l~--------------~~V~~~g~~~~~ 350 (396)
..++++++.+.+ + +++.+++.- ++. ..+.+++...+.+.. +++.+..+.+++
T Consensus 224 p~~l~al~~L~~-------~-~~~~~v~~~~~~~-----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 290 (396)
T TIGR03492 224 KLLLRALEALPD-------S-QPFVFLAAIVPSL-----SLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAF 290 (396)
T ss_pred HHHHHHHHHHhh-------C-CCeEEEEEeCCCC-----CHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhH
Confidence 899999988753 2 577776654 222 446666666654543 236666777889
Q ss_pred HHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 351 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 351 ~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++|++||++|..|- .+..|++++|+|+|....++
T Consensus 291 ~~~l~~ADlvI~rSG-------t~T~E~a~lg~P~Ilip~~~ 325 (396)
T TIGR03492 291 AEILHWADLGIAMAG-------TATEQAVGLGKPVIQLPGKG 325 (396)
T ss_pred HHHHHhCCEEEECcC-------HHHHHHHHhCCCEEEEeCCC
Confidence 999999999997553 55699999999999987443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-05 Score=74.23 Aligned_cols=263 Identities=14% Similarity=0.129 Sum_probs=153.5
Q ss_pred ChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhc-ceEEEEcCc---hhhhhhccCCcEEEEcCc-h
Q 016053 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKG---QETINTALKADLIVLNTA-V 160 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~DiV~~~~~-~ 160 (396)
|--+.+.-|.+.|+++ ++.+.+-+..... .+. ....+... -..+++... .+++....+||+++.-.. .
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg--~e~---a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~EtEl 134 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILVTTMTPTG--AER---AAALFGDSVIHQYLPLDLPIAVRRFLRKWRPKLLIIMETEL 134 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccH--HHH---HHHHcCCCeEEEecCcCchHHHHHHHHhcCCCEEEEEeccc
Confidence 4448899999999998 6676666522211 000 11112111 122233332 345556789999865542 2
Q ss_pred hhHHHHHHHhcCCCccccceeeeeeecccc---c--CchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEE
Q 016053 161 AGKWLDAVLKEDVPRVLPNVLWWIHEMRGH---Y--FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV 235 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~---~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI 235 (396)
-...+..+.+.++|.+ +....-.... | .+......+...+.+++.+....+.+. ..|..+ +.+.
T Consensus 135 WPnli~e~~~~~~p~~----LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~-----~LGa~~--v~v~ 203 (419)
T COG1519 135 WPNLINELKRRGIPLV----LVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFR-----SLGAKP--VVVT 203 (419)
T ss_pred cHHHHHHHHHcCCCEE----EEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHH-----hcCCcc--eEEe
Confidence 2233445566677643 2112111101 1 122234455677777777776665544 456554 5554
Q ss_pred ecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEe
Q 016053 236 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG 315 (396)
Q Consensus 236 ~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG 315 (396)
.|= .|...+.+ ......+.+|.+++.. +.+++..+. +..--..++++++.+++ ++|+..+++|-
T Consensus 204 GNl----Kfd~~~~~-~~~~~~~~~r~~l~~~--r~v~iaaST--H~GEeei~l~~~~~l~~-------~~~~~llIlVP 267 (419)
T COG1519 204 GNL----KFDIEPPP-QLAAELAALRRQLGGH--RPVWVAAST--HEGEEEIILDAHQALKK-------QFPNLLLILVP 267 (419)
T ss_pred cce----eecCCCCh-hhHHHHHHHHHhcCCC--CceEEEecC--CCchHHHHHHHHHHHHh-------hCCCceEEEec
Confidence 432 11111111 1133467788888764 566666666 33334558888888876 45899999997
Q ss_pred cCCCccchHHHHHHHHHHhcCCC------------C-cEEEecCcCCHHHHHHHcCEEEe-cCCCCCCCccHHHHHHHhc
Q 016053 316 SDMNAQTKFESELRNYVMQKKIQ------------D-RVHFVNKTLTVAPYLAAIDVLVQ-NSQAWGECFGRITIEAMAF 381 (396)
Q Consensus 316 ~g~~~~~~~~~~l~~~~~~~~l~------------~-~V~~~g~~~~~~~~~~~aDv~v~-pS~~~~E~fg~~~lEAma~ 381 (396)
.=+ +-.+.+++++++.|+. + +|.+....-||..+|+.+|+.+. -|. .+--|--++|+.++
T Consensus 268 RHp----ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSl--v~~GGHN~LEpa~~ 341 (419)
T COG1519 268 RHP----ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSL--VPIGGHNPLEPAAF 341 (419)
T ss_pred CCh----hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcc--cCCCCCChhhHHHc
Confidence 654 4567788888888765 1 23222223689999999999554 566 66777889999999
Q ss_pred CCCEEEc
Q 016053 382 QLPVLVL 388 (396)
Q Consensus 382 G~PVI~t 388 (396)
|+|||.-
T Consensus 342 ~~pvi~G 348 (419)
T COG1519 342 GTPVIFG 348 (419)
T ss_pred CCCEEeC
Confidence 9999974
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.6e-05 Score=76.71 Aligned_cols=256 Identities=10% Similarity=0.067 Sum_probs=147.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEE-c--------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-------------- 139 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------- 139 (396)
.||.++..+. .|..+-.+|+++|+++.-++.+..-.++. +...|++.+. .
T Consensus 227 ~kIfI~AGE~---SGDlhgA~Li~aLk~~~P~i~~~GvGG~~------------M~aaG~e~l~d~~eLsVmG~~EVL~~ 291 (608)
T PRK01021 227 TSCFISAGEH---SGDTLGGNLLKEIKALYPDIHCFGVGGPQ------------MRAEGFHPLFNMEEFQVSGFWEVLLA 291 (608)
T ss_pred CeEEEEeccc---cHHHHHHHHHHHHHhcCCCcEEEEEccHH------------HHhCcCcccCChHHhhhhhHHHHHHH
Confidence 3788888544 23588889999999987777777644331 1122222210 0
Q ss_pred -C-------chhhhhhccCCcEEEEcC-chhhH-HHHHHHhcCCCccccceeeeeeecccccCchh-hhcccccccccee
Q 016053 140 -K-------GQETINTALKADLIVLNT-AVAGK-WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-YVKHLPLVAGAMI 208 (396)
Q Consensus 140 -~-------~~~~~~~~~~~DiV~~~~-~~~~~-~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-~~~~~~~~~~~~~ 208 (396)
+ ........++||++++-+ |..+. ....+++.++. .|+++.+--. -+.+... ..+..+.+|..++
T Consensus 292 l~~l~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~---ipviyYVsPq-VWAWR~~Rikki~k~vD~ll~ 367 (608)
T PRK01021 292 LFKLWYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYK---GKIVHYVCPS-IWAWRPKRKTILEKYLDLLLL 367 (608)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCC---CCEEEEECcc-ceeeCcchHHHHHHHhhhhee
Confidence 0 001222358999998765 44344 44455555531 1344443321 1223333 3334457788888
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCE-EEEEEeccc--CCCCH
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVS--RGKGQ 285 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~-~il~vG~l~--~~Kg~ 285 (396)
...+-.+++.+ .|++ +..+.|+.=.. ... ..++++.|+++|+++++. +-+..|+=. -.+..
T Consensus 368 IfPFE~~~y~~-----~gv~---v~yVGHPL~d~-i~~-------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rll 431 (608)
T PRK01021 368 ILPFEQNLFKD-----SPLR---TVYLGHPLVET-ISS-------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNL 431 (608)
T ss_pred cCccCHHHHHh-----cCCC---eEEECCcHHhh-ccc-------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHH
Confidence 88887777653 4543 66666665211 111 112455788999975544 445556522 14566
Q ss_pred HHHHHHHH--HHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEec
Q 016053 286 DLFLHSFY--ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQN 363 (396)
Q Consensus 286 ~~li~a~~--~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~p 363 (396)
..+++|++ .+. ++.++++..... .+.+.+++..++.++. .+.++... +-.+++++||+.+..
T Consensus 432 Pv~l~aa~~~~l~----------~~l~fvvp~a~~----~~~~~i~~~~~~~~~~-~~~ii~~~-~~~~~m~aaD~aLaa 495 (608)
T PRK01021 432 TIQVQAFLASSLA----------STHQLLVSSANP----KYDHLILEVLQQEGCL-HSHIVPSQ-FRYELMRECDCALAK 495 (608)
T ss_pred HHHHHHHHHHHhc----------cCeEEEEecCch----hhHHHHHHHHhhcCCC-CeEEecCc-chHHHHHhcCeeeec
Confidence 77777776 332 367887754321 2456666666543310 23333221 247899999999987
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
|- .+.+|++.+|+|.|..
T Consensus 496 SG-------TaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 496 CG-------TIVLETALNQTPTIVT 513 (608)
T ss_pred CC-------HHHHHHHHhCCCEEEE
Confidence 74 9999999999999875
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.6e-05 Score=71.15 Aligned_cols=50 Identities=14% Similarity=0.281 Sum_probs=41.9
Q ss_pred CCcEEEecCc-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 338 QDRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 338 ~~~V~~~g~~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
++++.+.++. +++.++|.+||++|.-+- ..++.||+++|+|+|.....|.
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~vI~~~G------~~t~~Ea~~~g~P~l~ip~~~~ 278 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAELVITHGG------FSLISEALSLGKPLIVIPDLGQ 278 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCEEEECCC------hHHHHHHHHcCCCEEEEcCCCc
Confidence 4689999887 589999999999996443 2468999999999999888764
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.8e-06 Score=82.77 Aligned_cols=115 Identities=18% Similarity=0.226 Sum_probs=77.1
Q ss_pred HHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC-
Q 016053 260 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ- 338 (396)
Q Consensus 260 ~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~- 338 (396)
.|+.+|++++.+++++++++ .|=-+..+++..++.+.. |+.+|++..... ..++.+++.+++.|+.
T Consensus 275 ~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v-------P~S~L~L~~~~~----~~~~~l~~~~~~~Gv~~ 341 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV-------PNSRLWLLRFPA----SGEARLRRRFAAHGVDP 341 (468)
T ss_dssp ETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS-------TTEEEEEEETST----THHHHHHHHHHHTTS-G
T ss_pred CHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC-------CCcEEEEeeCCH----HHHHHHHHHHHHcCCCh
Confidence 58899999998877777765 777888888888887744 899998876543 2457888899999987
Q ss_pred CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 339 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 339 ~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
++++|.+.. ++-...+..+||++-+. .-+-+.+.+||+.+|+|||+-..
T Consensus 342 ~Ri~f~~~~~~~ehl~~~~~~DI~LDT~---p~nG~TTt~dALwmGVPvVTl~G 392 (468)
T PF13844_consen 342 DRIIFSPVAPREEHLRRYQLADICLDTF---PYNGGTTTLDALWMGVPVVTLPG 392 (468)
T ss_dssp GGEEEEE---HHHHHHHGGG-SEEE--S---SS--SHHHHHHHHHT--EEB---
T ss_pred hhEEEcCCCCHHHHHHHhhhCCEEeeCC---CCCCcHHHHHHHHcCCCEEeccC
Confidence 789999864 44455678899999874 45668999999999999998653
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00032 Score=65.08 Aligned_cols=274 Identities=17% Similarity=0.185 Sum_probs=149.7
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhhhhhhhhhhhhcceE--EEEc---------
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--VISA--------- 139 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------- 139 (396)
|+++||++|...-+- ..-+..++.++.+.+ .+..|+....... .+. ....+...++. .+.+
T Consensus 1 m~~~Kv~~I~GTRPE---~iKmapli~~~~~~~~~~~~vi~TGQH~d-~em---~~~~le~~~i~~pdy~L~i~~~~~tl 73 (383)
T COG0381 1 MKMLKVLTIFGTRPE---AIKMAPLVKALEKDPDFELIVIHTGQHRD-YEM---LDQVLELFGIRKPDYDLNIMKPGQTL 73 (383)
T ss_pred CCceEEEEEEecCHH---HHHHhHHHHHHHhCCCCceEEEEeccccc-HHH---HHHHHHHhCCCCCCcchhccccCCCH
Confidence 567899999832111 156778888999876 8887776433221 011 11112222222 1111
Q ss_pred --------CchhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeecccc-----cCchhhhcccc--c
Q 016053 140 --------KGQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGH-----YFKLDYVKHLP--L 202 (396)
Q Consensus 140 --------~~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~-----~~~~~~~~~~~--~ 202 (396)
.....+....+||+|.+|+-..... ...+....+| + .|--.+. +++....+.+- .
T Consensus 74 ~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~Ip-----V---~HvEAGlRt~~~~~PEE~NR~l~~~~ 145 (383)
T COG0381 74 GEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIP-----V---GHVEAGLRTGDLYFPEEINRRLTSHL 145 (383)
T ss_pred HHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCc-----e---EEEecccccCCCCCcHHHHHHHHHHh
Confidence 0113444569999999997332221 2334445554 2 3332211 23333222221 2
Q ss_pred cccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHH-cCCCCCCEEEEEEecccC
Q 016053 203 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES-LGVRNEDLLFAIINSVSR 281 (396)
Q Consensus 203 ~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~-~g~~~~~~~il~vG~l~~ 281 (396)
.+..++.+...++.+. +-|.+++++.++.|.+-......... -.+....... ++.+.++++++..=|-..
T Consensus 146 S~~hfapte~ar~nLl-----~EG~~~~~IfvtGnt~iDal~~~~~~----~~~~~~~~~~~~~~~~~~~iLvT~HRreN 216 (383)
T COG0381 146 SDLHFAPTEIARKNLL-----REGVPEKRIFVTGNTVIDALLNTRDR----VLEDSKILAKGLDDKDKKYILVTAHRREN 216 (383)
T ss_pred hhhhcCChHHHHHHHH-----HcCCCccceEEeCChHHHHHHHHHhh----hccchhhHHhhhccccCcEEEEEcchhhc
Confidence 2333333333333333 56889889999998753222111000 0001112222 555555677766666554
Q ss_pred C-CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH-HhcCCCCcEEEecCc--CCHHHHHHHc
Q 016053 282 G-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV-MQKKIQDRVHFVNKT--LTVAPYLAAI 357 (396)
Q Consensus 282 ~-Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~-~~~~l~~~V~~~g~~--~~~~~~~~~a 357 (396)
. +++..+++++.++.++ ++++.++.--.. +..+++.. ..++-.++|+++.+. .+...++..|
T Consensus 217 ~~~~~~~i~~al~~i~~~-------~~~~~viyp~H~-------~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a 282 (383)
T COG0381 217 VGEPLEEICEALREIAEE-------YPDVIVIYPVHP-------RPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNA 282 (383)
T ss_pred ccccHHHHHHHHHHHHHh-------CCCceEEEeCCC-------ChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhc
Confidence 3 8889999999888763 367766654432 24444444 456666789999886 6788888888
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
-+.+--| |...=||-..|+||++-+.
T Consensus 283 ~~iltDS-------GgiqEEAp~lg~Pvl~lR~ 308 (383)
T COG0381 283 FLILTDS-------GGIQEEAPSLGKPVLVLRD 308 (383)
T ss_pred eEEEecC-------CchhhhHHhcCCcEEeecc
Confidence 6666433 3455799999999998654
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00034 Score=61.66 Aligned_cols=244 Identities=18% Similarity=0.186 Sum_probs=130.5
Q ss_pred cEEEEEeccCCC-CCh-HHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 75 KLVLLVSHELSL-SGG-PLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~-~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
|||+|++..... |+| -.+...|++.|.++|..+..++.+.... .+.. ...++.+.-.+.- ...+..++|
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~------~~~~--~~~~f~~~~~~~~-n~ik~~k~d 71 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEA------IIHK--VYEGFKVLEGRGN-NLIKEEKFD 71 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhh------hhhh--hhhhccceeeecc-cccccccCC
Confidence 589999876433 444 4999999999999998888887443110 0111 1122222211111 155678999
Q ss_pred EEEEcCc-hhhHHHHHHH-hcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCC
Q 016053 153 LIVLNTA-VAGKWLDAVL-KEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP 230 (396)
Q Consensus 153 iV~~~~~-~~~~~~~~~~-~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~ 230 (396)
+++..+. ...-.+.... ..+ .+.++. .+.....+. ..+.++ ..... ....++.-+.
T Consensus 72 ~lI~Dsygl~~dd~k~ik~e~~-----~k~l~f-Dd~~~~~~~--------d~d~iv---N~~~~-----a~~~y~~v~~ 129 (318)
T COG3980 72 LLIFDSYGLNADDFKLIKEEAG-----SKILIF-DDENAKSFK--------DNDLIV---NAILN-----ANDYYGLVPN 129 (318)
T ss_pred EEEEeccCCCHHHHHHHHHHhC-----CcEEEe-cCCCccchh--------hhHhhh---hhhhc-----chhhccccCc
Confidence 9988763 2222333333 233 223432 222111111 111111 01111 1113444444
Q ss_pred CEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEE
Q 016053 231 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH 310 (396)
Q Consensus 231 k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~ 310 (396)
+. -++.|.+.-...+.. ...|++.+++ +.+-+++..|. ...|| ..++.++.+.+ .++.
T Consensus 130 k~-~~~lGp~y~~lr~eF-----~~~r~~~~~r----~~r~ilI~lGG-sDpk~--lt~kvl~~L~~---------~~~n 187 (318)
T COG3980 130 KT-RYYLGPGYAPLRPEF-----YALREENTER----PKRDILITLGG-SDPKN--LTLKVLAELEQ---------KNVN 187 (318)
T ss_pred ce-EEEecCCceeccHHH-----HHhHHHHhhc----chheEEEEccC-CChhh--hHHHHHHHhhc---------cCee
Confidence 43 345576655444332 1123333332 23334445555 34454 34555555543 3444
Q ss_pred EEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 311 AVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 311 l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
+.| +|++. +..+.+++.++++ +++.++-..+||++++..||..+.. -|.++.||...|+|.
T Consensus 188 l~iV~gs~~----p~l~~l~k~~~~~---~~i~~~~~~~dma~LMke~d~aI~A-------aGstlyEa~~lgvP~ 249 (318)
T COG3980 188 LHIVVGSSN----PTLKNLRKRAEKY---PNINLYIDTNDMAELMKEADLAISA-------AGSTLYEALLLGVPS 249 (318)
T ss_pred EEEEecCCC----cchhHHHHHHhhC---CCeeeEecchhHHHHHHhcchheec-------cchHHHHHHHhcCCc
Confidence 444 34332 2456667777665 6898988889999999999999852 368999999999993
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00014 Score=65.93 Aligned_cols=108 Identities=12% Similarity=0.158 Sum_probs=68.7
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++..+++.+|.= .-| .+|++++.+....+.+. ...-++|.|+..+. +.++.+.+.+. -.++|...-+.
T Consensus 218 E~~~Ilvs~GGG--~dG-~eLi~~~l~A~~~l~~l----~~~~~ivtGP~MP~--~~r~~l~~~A~---~~p~i~I~~f~ 285 (400)
T COG4671 218 EGFDILVSVGGG--ADG-AELIETALAAAQLLAGL----NHKWLIVTGPFMPE--AQRQKLLASAP---KRPHISIFEFR 285 (400)
T ss_pred ccceEEEecCCC--hhh-HHHHHHHHHHhhhCCCC----CcceEEEeCCCCCH--HHHHHHHHhcc---cCCCeEEEEhh
Confidence 456677777652 233 44555554443333221 22247777877633 23344444443 34689999999
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+++..++..||..|.-+-+ +++-|-+++|+|.+.-...-+
T Consensus 286 ~~~~~ll~gA~~vVSm~GY------NTvCeILs~~k~aLivPr~~p 325 (400)
T COG4671 286 NDFESLLAGARLVVSMGGY------NTVCEILSFGKPALIVPRAAP 325 (400)
T ss_pred hhHHHHHHhhheeeecccc------hhhhHHHhCCCceEEeccCCC
Confidence 9999999999999853331 788999999999887655443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.5e-05 Score=64.47 Aligned_cols=94 Identities=21% Similarity=0.180 Sum_probs=59.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC-------------ch
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK-------------GQ 142 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 142 (396)
|||+++... +.+..++++.|.++||||++++..... .......++.++... ..
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~---------~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l 66 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDY---------EKYEIIEGIKVIRLPSPRKSPLNYIKYFRL 66 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCc---------hhhhHhCCeEEEEecCCCCccHHHHHHHHH
Confidence 578887533 468899999999999999999975432 112223344444332 12
Q ss_pred hhhhhccCCcEEEEcCchhh-HHHHHHH-hcCCCccccceeeeeeec
Q 016053 143 ETINTALKADLIVLNTAVAG-KWLDAVL-KEDVPRVLPNVLWWIHEM 187 (396)
Q Consensus 143 ~~~~~~~~~DiV~~~~~~~~-~~~~~~~-~~~~~~~~~~vv~~~h~~ 187 (396)
..+.+..+||+||+|.+.+. .....+. ..+. .+++++.|+.
T Consensus 67 ~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~----~~~i~~~hg~ 109 (139)
T PF13477_consen 67 RKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKN----KKVIYTVHGS 109 (139)
T ss_pred HHHhccCCCCEEEEecCChHHHHHHHHHHHcCC----CCEEEEecCC
Confidence 33445689999999997653 3332222 2221 3588889975
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00038 Score=66.92 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=38.6
Q ss_pred CCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 337 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 337 l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
++++|.+.++... .+++.+||++|..+- ..++.||+++|+|+|+....+
T Consensus 273 ~~~~v~~~~~~p~-~~ll~~~~~~I~hgG------~~t~~Eal~~G~P~v~~p~~~ 321 (392)
T TIGR01426 273 LPPNVEVRQWVPQ-LEILKKADAFITHGG------MNSTMEALFNGVPMVAVPQGA 321 (392)
T ss_pred CCCCeEEeCCCCH-HHHHhhCCEEEECCC------chHHHHHHHhCCCEEecCCcc
Confidence 4578999998754 589999999996333 357899999999999976543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00036 Score=66.56 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=129.0
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++++|++.+.. ...++-.+.+.+.+.. ...++++.+++.... . .....+..++.....+.+....+.
T Consensus 12 ~~~~Ivf~~~~g~~~~dN~~~l~~~l~~-~~~~~~~~~~~~~~~---------~--~~~~~~~~~v~~~s~~~~~~~~~A 79 (369)
T PF04464_consen 12 KKKKIVFESESGNKFSDNPKALFEYLIK-NYPDYKIYWIINKKS---------P--ELKPKGIKVVKFGSLKHIYYLARA 79 (369)
T ss_dssp EEEEEEEEBTTTTBS-HHHHHHHHHHHH-H-TTSEEEEEESSGG---------G------SS-EEEETTSHHHHHHHHHE
T ss_pred cCCEEEEEECCCCCCCCCHHHHHHHHHh-hCCCcEEEEEEcCch---------H--hhccCCceEEeecHHHHHHHHHhC
Confidence 44578888753 3335545666665552 346689988885432 1 334557778877777777777788
Q ss_pred cEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCc----------hhhhccccccccceeeccccHHHHHHHH
Q 016053 152 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK----------LDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~----------~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
+++++++........ .... ..+++..-|+..-.... ..........+.+++.|....+.+.+
T Consensus 80 k~~i~~~~~~~~~~~-~~~~-----~~~~i~lwHG~~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~-- 151 (369)
T PF04464_consen 80 KYIISDSYFPDLIYF-KKRK-----NQKYIQLWHGIPLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK-- 151 (369)
T ss_dssp EEEEESS---T--TS----T-----TSEEEE--SS--SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH--
T ss_pred cEEEECCCCCccccc-ccCC-----CcEEEEecCCCcccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH--
Confidence 999988543331100 0111 14466666765200000 01223445677777777766655443
Q ss_pred HhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCH------HHHHHHHHHH
Q 016053 222 RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQ------DLFLHSFYES 295 (396)
Q Consensus 222 ~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~------~~li~a~~~l 295 (396)
.++.+.+++. ..|..- ++...+.. ...++.+++.++++.++.+|+|+=........ ...++ +..+
T Consensus 152 --~f~~~~~~i~--~~G~PR--~D~l~~~~--~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~-~~~l 222 (369)
T PF04464_consen 152 --AFGYPEDKIL--VTGYPR--NDYLFNKS--KENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD-FEKL 222 (369)
T ss_dssp --HTT--GGGEE--ES--GG--GHHHHHST--T-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT--HHHH
T ss_pred --HhccCcceEE--EeCCCe--EhHHhccC--HHHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC-HHHH
Confidence 6677766544 456432 22111111 11156789999999999999999654332221 22222 2222
Q ss_pred HHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHh-cCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 296 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~-~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
. .+.+ .++.+++-.-- ........ ....++|.++..-+++.+++..||++|- - ++-+
T Consensus 223 ~-~~~~-----~~~~li~k~Hp---------~~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~aDiLIT--D-----ySSi 280 (369)
T PF04464_consen 223 N-FLLK-----NNYVLIIKPHP---------NMKKKFKDFKEDNSNIIFVSDNEDIYDLLAAADILIT--D-----YSSI 280 (369)
T ss_dssp H-HHHT-----TTEEEEE--SH---------HHHTT----TT-TTTEEE-TT-S-HHHHHHT-SEEEE--S-----S-TH
T ss_pred H-HHhC-----CCcEEEEEeCc---------hhhhchhhhhccCCcEEECCCCCCHHHHHHhcCEEEE--e-----chhH
Confidence 1 1211 68888877752 11222211 3344789888887899999999999993 2 3467
Q ss_pred HHHHHhcCCCEEEc
Q 016053 375 TIEAMAFQLPVLVL 388 (396)
Q Consensus 375 ~lEAma~G~PVI~t 388 (396)
+.|++.+++|||-.
T Consensus 281 ~fD~~~l~KPiify 294 (369)
T PF04464_consen 281 IFDFLLLNKPIIFY 294 (369)
T ss_dssp HHHHGGGT--EEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 89999999999954
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0039 Score=57.04 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=83.2
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec-C
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-K 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g-~ 346 (396)
.++..|+.-.+-++.-++.++++++++.. ..+.++++-=+-+.++.+|.+++.+..+++--.+++..+- +
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~---------~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~ 253 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF---------GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEF 253 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc---------CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhh
Confidence 45677775556677888988888887632 2578877754444344568899999999875556787765 3
Q ss_pred c--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
. +|..++++.||+.+++.. +-++.|+. .=.+.+|+||+-+..
T Consensus 254 mpf~eYl~lL~~cDl~if~~~-RQQgiGnI-~lLl~~G~~v~L~~~ 297 (360)
T PF07429_consen 254 MPFDEYLALLSRCDLGIFNHN-RQQGIGNI-CLLLQLGKKVFLSRD 297 (360)
T ss_pred CCHHHHHHHHHhCCEEEEeec-hhhhHhHH-HHHHHcCCeEEEecC
Confidence 3 889999999999999877 36788875 558999999998754
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00085 Score=62.83 Aligned_cols=247 Identities=15% Similarity=0.056 Sum_probs=123.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcce-EEEE-cCch-----hhhhh
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV-QVIS-AKGQ-----ETINT 147 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~-----~~~~~ 147 (396)
|||.++..+. .|..+-..|+++|++ ++.++.-.++.- ........ .+.--|+ +++. .+.. .....
T Consensus 2 ~~i~i~aGE~---SGD~~ga~l~~~l~~---~~~~~G~GG~~m-~~~~~~~~-~lsv~G~~evl~~~~~~~~~~~~~~~~ 73 (347)
T PRK14089 2 MKILVSALEP---SANLHLKELLKNLPK---DYELIGIFDKSL-GNPLYDSR-EFSIMGFVDVLPKLFFAKKAIKEMVEL 73 (347)
T ss_pred cEEEEEeccc---cHHHHHHHHHHHHhc---CCEEEEEechHH-HHhcCChH-HhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888544 235788889999987 455544333210 00000000 0000010 0000 0000 01112
Q ss_pred ccCCcEEEEcC-chhhHHHH-HHHhcCCCccccceeeeeeecccccCchh-hhccccccccceeeccccHHHHHHHHHhh
Q 016053 148 ALKADLIVLNT-AVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLD-YVKHLPLVAGAMIDSHVTAEYWKNRTRER 224 (396)
Q Consensus 148 ~~~~DiV~~~~-~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 224 (396)
.++||+++.-+ |.....+. .+++.+ |. .|++|++--.. +.+... .....+.+|...+...+-.++
T Consensus 74 ~~~pd~~i~iD~p~Fnl~lak~~k~~~-~~--i~viyyi~Pqv-WAWr~~R~~~i~k~~d~vl~ifPFE~~~-------- 141 (347)
T PRK14089 74 AKQADKVLLMDSSSFNIPLAKKIKKAY-PK--KEIIYYILPQV-WAWKKGRAKILEKYCDFLASILPFEVQF-------- 141 (347)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcC-CC--CCEEEEECccc-eeeCcchHHHHHHHHhhhhccCCCCHHH--------
Confidence 37999998765 44444333 444441 11 23554443221 222322 233334566666555544333
Q ss_pred hcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccC--CCCHHHHHHHHHHHHHHHHhh
Q 016053 225 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR--GKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 225 ~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~--~Kg~~~li~a~~~l~~~~~~~ 302 (396)
||. +..++.|++-.. .... +.. ++++..+.+.-|+-.. .+.+..+++++.++.+
T Consensus 142 yg~---~~~~VGhPl~d~-~~~~-------------~~~--~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~----- 197 (347)
T PRK14089 142 YQS---KATYVGHPLLDE-IKEF-------------KKD--LDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEG----- 197 (347)
T ss_pred hCC---CCEEECCcHHHh-hhhh-------------hhh--cCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhh-----
Confidence 232 355666664221 1100 111 2334455555565321 2445556677666543
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcC
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 382 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G 382 (396)
...++++.|... . +.+++...+. ..+.+.+ +..+++++||+.+..|- .+.+|++.+|
T Consensus 198 ----~~~~~~i~~a~~-----~-~~i~~~~~~~---~~~~~~~---~~~~~m~~aDlal~~SG-------T~TLE~al~g 254 (347)
T PRK14089 198 ----KEKILVVPSFFK-----G-KDLKEIYGDI---SEFEISY---DTHKALLEAEFAFICSG-------TATLEAALIG 254 (347)
T ss_pred ----cCcEEEEeCCCc-----H-HHHHHHHhcC---CCcEEec---cHHHHHHhhhHHHhcCc-------HHHHHHHHhC
Confidence 236788887642 2 5555555432 2344553 67889999999997664 7778999999
Q ss_pred CCEEEc
Q 016053 383 LPVLVL 388 (396)
Q Consensus 383 ~PVI~t 388 (396)
+|.|..
T Consensus 255 ~P~Vv~ 260 (347)
T PRK14089 255 TPFVLA 260 (347)
T ss_pred CCEEEE
Confidence 999874
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00081 Score=63.30 Aligned_cols=210 Identities=14% Similarity=0.140 Sum_probs=98.1
Q ss_pred hhhccCCcEEEEcCchhh--HHHHHHHhcCCCccccceeeeeee-cccc-c---Cchhhhcc-cc-ccccceeeccccHH
Q 016053 145 INTALKADLIVLNTAVAG--KWLDAVLKEDVPRVLPNVLWWIHE-MRGH-Y---FKLDYVKH-LP-LVAGAMIDSHVTAE 215 (396)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~--~~~~~~~~~~~~~~~~~vv~~~h~-~~~~-~---~~~~~~~~-~~-~~~~~~~~s~~~~~ 215 (396)
+....+||+|++++-... .....+...++| ++ +++. .++. . ......+. .. ..+..++.+....+
T Consensus 62 ~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ip-----v~-HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~t~~~~~ 135 (346)
T PF02350_consen 62 VLEREKPDAVLVLGDRNEALAAALAAFYLNIP-----VA-HIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAPTEEARE 135 (346)
T ss_dssp HHHHHT-SEEEEETTSHHHHHHHHHHHHTT-E-----EE-EES-----S-TTSSTTHHHHHHHHHHH-SEEEESSHHHHH
T ss_pred HHHhcCCCEEEEEcCCchHHHHHHHHHHhCCC-----EE-EecCCCCccccCCCCchhhhhhhhhhhhhhhccCCHHHHH
Confidence 345689999999883222 222334455554 22 2332 1111 1 11122222 22 23333333333333
Q ss_pred HHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHH-HHHc-CCCCCCEEEEEEecccCC---CCHHHHHH
Q 016053 216 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV-RESL-GVRNEDLLFAIINSVSRG---KGQDLFLH 290 (396)
Q Consensus 216 ~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~-r~~~-g~~~~~~~il~vG~l~~~---Kg~~~li~ 290 (396)
++. +.|.++.++.++.|..-.......+. ..+.. ...+ ...+++++++..=+.... .....+.+
T Consensus 136 ----~L~-~~G~~~~rI~~vG~~~~D~l~~~~~~------~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 136 ----RLL-QEGEPPERIFVVGNPGIDALLQNKEE------IEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp ----HHH-HTT--GGGEEE---HHHHHHHHHHHT------TCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred ----HHH-hcCCCCCeEEEEChHHHHHHHHhHHH------HhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 333 56888899999986532222111100 00011 1111 114556666555443332 33456666
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~ 368 (396)
+++.+.+. .++.+++..... +.....+.+...++ ++++++... .+...+++.|+++|--|
T Consensus 205 ~l~~L~~~--------~~~~vi~~~hn~---p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS---- 266 (346)
T PF02350_consen 205 ALKALAER--------QNVPVIFPLHNN---PRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS---- 266 (346)
T ss_dssp HHHHHHHH--------TTEEEEEE--S----HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS----
T ss_pred HHHHHHhc--------CCCcEEEEecCC---chHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC----
Confidence 66665542 578888888743 12456666666655 389999875 78999999999999533
Q ss_pred CCccHHHH-HHHhcCCCEEEcCCCCC
Q 016053 369 ECFGRITI-EAMAFQLPVLVLSELHP 393 (396)
Q Consensus 369 E~fg~~~l-EAma~G~PVI~t~~gG~ 393 (396)
| .+. ||..+|+|+|.-+.-|.
T Consensus 267 ---s-GI~eEa~~lg~P~v~iR~~ge 288 (346)
T PF02350_consen 267 ---S-GIQEEAPSLGKPVVNIRDSGE 288 (346)
T ss_dssp ---H-HHHHHGGGGT--EEECSSS-S
T ss_pred ---c-cHHHHHHHhCCeEEEecCCCC
Confidence 2 355 99999999999865554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0084 Score=53.85 Aligned_cols=237 Identities=12% Similarity=0.094 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-------------------hhhhhccCC
Q 016053 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ-------------------ETINTALKA 151 (396)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 151 (396)
.++.++...|+++||+|.+-+.+... +.+.+.-.|++....... ..+....+|
T Consensus 14 hfFk~lI~elekkG~ev~iT~rd~~~--------v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kp 85 (346)
T COG1817 14 HFFKNLIWELEKKGHEVLITCRDFGV--------VTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKP 85 (346)
T ss_pred hHHHHHHHHHHhCCeEEEEEEeecCc--------HHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 78999999999999999999865543 555566667666444322 123345899
Q ss_pred cEEEE-cCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCC
Q 016053 152 DLIVL-NTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP 230 (396)
Q Consensus 152 DiV~~-~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~ 230 (396)
|+.+. |++... ..+...++| .+....+-+... .....++.++.++.....-...+. .+|-++.
T Consensus 86 dv~i~~~s~~l~---rvafgLg~p-----sIi~~D~ehA~~---qnkl~~Pla~~ii~P~~~~~~~~~-----~~G~~p~ 149 (346)
T COG1817 86 DVAIGKHSPELP---RVAFGLGIP-----SIIFVDNEHAEA---QNKLTLPLADVIITPEAIDEEELL-----DFGADPN 149 (346)
T ss_pred ceEeecCCcchh---hHHhhcCCc-----eEEecCChhHHH---HhhcchhhhhheecccccchHHHH-----HhCCCcc
Confidence 99876 333222 233444544 333333322111 123334455556655555444333 5576655
Q ss_pred CEEEEecCCcc----chhhhhhhhHHHHHhHHHHHHHcCCCCC-CEEEEEEec-----ccCCCCHHHHHHHHHHHHHHHH
Q 016053 231 DTYVVHLGNSK----ELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINS-----VSRGKGQDLFLHSFYESLELIK 300 (396)
Q Consensus 231 k~~vI~ngid~----~~~~~~~~~~~~~~~~~~~r~~~g~~~~-~~~il~vG~-----l~~~Kg~~~li~a~~~l~~~~~ 300 (396)
++ +=+||+-. ..|.|. .++-+++|+.++ .++++=.-. ....++.+.+.++++.+.+
T Consensus 150 ~i-~~~~giae~~~v~~f~pd----------~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k--- 215 (346)
T COG1817 150 KI-SGYNGIAELANVYGFVPD----------PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK--- 215 (346)
T ss_pred ce-ecccceeEEeecccCCCC----------HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---
Confidence 43 34456421 223332 457788999875 444442222 1234555556666665532
Q ss_pred hhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh
Q 016053 301 EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 380 (396)
Q Consensus 301 ~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma 380 (396)
.-.+++-.. ++.++..+... +++.--..-|--.++--|++++-.+ |...-||..
T Consensus 216 --------~giV~ipr~--------~~~~eife~~~---n~i~pk~~vD~l~Llyya~lvig~g-------gTMarEaAl 269 (346)
T COG1817 216 --------YGIVLIPRE--------KEQAEIFEGYR---NIIIPKKAVDTLSLLYYATLVIGAG-------GTMAREAAL 269 (346)
T ss_pred --------CcEEEecCc--------hhHHHHHhhhc---cccCCcccccHHHHHhhhheeecCC-------chHHHHHHH
Confidence 224444432 22333444321 2222222234445777888888322 355689999
Q ss_pred cCCCEEEcCCC
Q 016053 381 FQLPVLVLSEL 391 (396)
Q Consensus 381 ~G~PVI~t~~g 391 (396)
.|+|.|++.-|
T Consensus 270 LGtpaIs~~pG 280 (346)
T COG1817 270 LGTPAISCYPG 280 (346)
T ss_pred hCCceEEecCC
Confidence 99999999843
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=64.66 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=31.1
Q ss_pred EEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 76 LVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 76 kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
|||+++.+..+ ||-..++..|.++|+++|++|.|+++..
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 69999987444 8888999999999999999999999754
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0044 Score=55.92 Aligned_cols=111 Identities=11% Similarity=0.056 Sum_probs=86.6
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
.+..+|+.-.+-++..++.++++++.+.. ..++++++.=+-+.++.+|.+++++..+++--++++..+-..
T Consensus 144 ~~~~tIlvGNSgd~SN~Hie~L~~l~~~~---------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 144 AGKMTILVGNSGDRSNRHIEALRALHQQF---------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred CCceEEEEeCCCCCcccHHHHHHHHHHHh---------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 34567765556677888999998887753 268998887766666778999999999998765788887753
Q ss_pred ---CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 348 ---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 348 ---~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+|..++++.||+.++.-. +-+|+|+. .=.+.+|+||+-+.
T Consensus 215 l~f~eYl~lL~~~Dl~~f~~~-RQQgiGnl-~lLi~~G~~v~l~r 257 (322)
T PRK02797 215 LPFDDYLALLRQCDLGYFIFA-RQQGIGTL-CLLIQLGKPVVLSR 257 (322)
T ss_pred CCHHHHHHHHHhCCEEEEeec-hhhHHhHH-HHHHHCCCcEEEec
Confidence 788999999999888655 37788876 44789999998775
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.074 Score=51.45 Aligned_cols=287 Identities=13% Similarity=0.085 Sum_probs=135.5
Q ss_pred cEEEEEecc-CCCCChHHHHHHHHHHHHhCC--CEEEEEeccCCCCchhhhhh-------h---------------hhhh
Q 016053 75 KLVLLVSHE-LSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYS-------L---------------EHKM 129 (396)
Q Consensus 75 ~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~-------~---------------~~~~ 129 (396)
|||+++..+ ....|-+-.+..+++.|++.. .+++|++..+.......... + ....
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL 80 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccchhHHHHH
Confidence 589988765 445888999999999999965 78888884433211000000 0 0000
Q ss_pred -------------hhcceEE-EEc--CchhhhhhccCCcEEEEcCc---------hhhHHHHHHHhcCCCccccceeeee
Q 016053 130 -------------WDRGVQV-ISA--KGQETINTALKADLIVLNTA---------VAGKWLDAVLKEDVPRVLPNVLWWI 184 (396)
Q Consensus 130 -------------~~~~~~~-~~~--~~~~~~~~~~~~DiV~~~~~---------~~~~~~~~~~~~~~~~~~~~vv~~~ 184 (396)
..+|... +.. .....+....+.|+++.-+. ....+...+...+ +|++.+-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~g-----kpv~l~g 155 (426)
T PRK10017 81 RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCAFMAK-----KPLYMIG 155 (426)
T ss_pred HhhhhHHHHHhhhccccccccccchhhHHHHHHHHHhCCEEEECCCCccccCcccHHHHHHHHHHHcC-----CCEEEEC
Confidence 0000000 000 00011223467899986551 1112222333334 4466666
Q ss_pred eecccccCchhhh----ccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHH
Q 016053 185 HEMRGHYFKLDYV----KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV 260 (396)
Q Consensus 185 h~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~ 260 (396)
+.. +.+...... ..+++++.+. .++....+..+..|++.+++.+.+ |+.+.-+....... ....+
T Consensus 156 qsi-GPf~~~~~r~l~r~vl~~~~~It-----vRD~~S~~~Lk~lGv~~~~v~~~a---DpAF~L~~~~~~~~--~~~~~ 224 (426)
T PRK10017 156 HSV-GPFQDEQFNQLANYVFGHCDALI-----LRESVSLDLMKRSNITTAKVEHGV---DTAWLVDHHTEDFT--ASYAV 224 (426)
T ss_pred CcC-CCcCCHHHHHHHHHHHhcCCEEE-----EccHHHHHHHHHhCCCccceEEec---ChhhhCCccccccc--cchhh
Confidence 655 333222222 2223333322 333333333346788877777655 33322111000000 00011
Q ss_pred HHHcCCCCCCEEEEEE-ecccCC-C----CHHHHHHHHHHHHHHHHhhccCCCCEEEEEEec--CCCc-cchHHHHHHHH
Q 016053 261 RESLGVRNEDLLFAII-NSVSRG-K----GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS--DMNA-QTKFESELRNY 331 (396)
Q Consensus 261 r~~~g~~~~~~~il~v-G~l~~~-K----g~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~--g~~~-~~~~~~~l~~~ 331 (396)
...++...++..|++. ..+.+. | ..+...+.++++.+.+.+. +.+++++-. +.+. .+++....++.
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~-----g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE-----GYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHC-----CCeEEEEecccCccCCCCchHHHHHHH
Confidence 1222222233344443 333211 2 2244556666655555442 444444432 1110 12344445555
Q ss_pred HHhcCCCCcEEEec-C--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 332 VMQKKIQDRVHFVN-K--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 332 ~~~~~l~~~V~~~g-~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.+.++-+.+++++. . ..++..+++.||++|-.=. -.++=|++.|+|+|+-.
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-------Ha~I~a~~~gvP~i~i~ 353 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-------HSAIISMNFGTPAIAIN 353 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-------hHHHHHHHcCCCEEEee
Confidence 55554444455433 2 2467799999999886444 46788999999999754
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.032 Score=53.72 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=59.8
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
.+++.+..|..... ..+++.+-.... + -+.++++...+. + . ...++++|+...++..
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~---~-----l~~~vi~~~~~~-~-----~------~~~~~p~n~~v~~~~p 293 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALA---D-----LDVRVIVSLGGA-R-----D------TLVNVPDNVIVADYVP 293 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHh---c-----CCcEEEEecccc-c-----c------ccccCCCceEEecCCC
Confidence 44555555665444 333333333222 1 577888877541 0 0 1225678898888874
Q ss_pred CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 349 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 349 ~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..+++..||++|...- -.++.||+.+|+|+|+-..+
T Consensus 294 -~~~~l~~ad~vI~hGG------~gtt~eaL~~gvP~vv~P~~ 329 (406)
T COG1819 294 -QLELLPRADAVIHHGG------AGTTSEALYAGVPLVVIPDG 329 (406)
T ss_pred -HHHHhhhcCEEEecCC------cchHHHHHHcCCCEEEecCC
Confidence 3469999999996433 46779999999999987665
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.4 Score=44.32 Aligned_cols=249 Identities=15% Similarity=0.042 Sum_probs=130.7
Q ss_pred ChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCchhhHHHH
Q 016053 88 GGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLD 166 (396)
Q Consensus 88 G~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~ 166 (396)
|.+....-|+++|.. .++++..+....+..+.+.. +..... .+.. ..........||+|+...........
T Consensus 2 Gh~~Q~~GLa~aL~~~~~~~~~~v~~~~~~~~lp~~--~~~~~~-----~~~~-~~~~~~~~~~pdLiIsaGr~t~~~~~ 73 (311)
T PF06258_consen 2 GHENQSLGLAEALGRLTPYEIKRVDVRRPWRWLPRL--LPAPLR-----ALLK-PFSPALEPPWPDLIISAGRRTAPAAL 73 (311)
T ss_pred chHHHHHHHHHHhcCccCcceeEeccccchhhcccc--ccchHH-----Hhhh-cccccccCCCCcEEEECCCchHHHHH
Confidence 677888999999987 37888877744321100000 000000 0000 01111223679999999865555444
Q ss_pred HHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcc-cCCCEEE---EecCCccc
Q 016053 167 AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI-KMPDTYV---VHLGNSKE 242 (396)
Q Consensus 167 ~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~-~~~k~~v---I~ngid~~ 242 (396)
.+.+.. . . -...+|.+..... ...+|.+++..+. +. ..+++.. .+|.++.+
T Consensus 74 ~l~r~~-g---g-~~~~V~i~~P~~~-------~~~FDlvi~p~HD-------------~~~~~~Nvl~t~ga~~~i~~~ 128 (311)
T PF06258_consen 74 ALRRAS-G---G-RTKTVQIMDPRLP-------PRPFDLVIVPEHD-------------RLPRGPNVLPTLGAPNRITPE 128 (311)
T ss_pred HHHHHc-C---C-CceEEEEcCCCCC-------ccccCEEEECccc-------------CcCCCCceEecccCCCcCCHH
Confidence 444421 0 0 1113343321111 2355555655544 12 1222322 23555544
Q ss_pred hhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCC--CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc
Q 016053 243 LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG--KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA 320 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~--Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~ 320 (396)
... ..+..+..+++-.+...+.+.+|.-+.. =+.+..-+.+.++.+..++ ....+.|..+--..
T Consensus 129 ~l~---------~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~vttSRRTp 194 (311)
T PF06258_consen 129 RLA---------EAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA-----YGGSLLVTTSRRTP 194 (311)
T ss_pred HHH---------HHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh-----CCCeEEEEcCCCCc
Confidence 332 2245555666655666677778764433 2334333444444444433 34788888875322
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 321 QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 321 ~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.+..+.+++..+ -.+.+.+.... .-+..+|+.||.++.+.- .-..+.||.+.|+||......+
T Consensus 195 -~~~~~~L~~~~~---~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D-----SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 195 -PEAEAALRELLK---DNPGVYIWDGTGENPYLGFLAAADAIVVTED-----SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred -HHHHHHHHHhhc---CCCceEEecCCCCCcHHHHHHhCCEEEEcCc-----cHHHHHHHHHcCCCEEEecCCC
Confidence 113333444443 33566455433 348899999999998644 2344689999999999988876
|
The function of this family is unknown. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.016 Score=54.50 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=40.8
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
-|..++.+.|++.|+||+ +|++|.+..|.-.+|+|-|+|+..|
T Consensus 492 lDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtTNlSG 534 (692)
T KOG3742|consen 492 LDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTTNLSG 534 (692)
T ss_pred CCHHHHhccccccccccc--cCCCCCCchheEEeccccccccccc
Confidence 478899999999999999 9999999999999999999999987
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.29 Score=45.95 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=69.8
Q ss_pred CCEEEEEEe-cccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec
Q 016053 269 EDLLFAIIN-SVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 269 ~~~~il~vG-~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
...+++..| +-...|++. .+.+.++.+.+ ...+++++|+.. +.+..+++...++ +.+.+.|
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~---------~~~~Vvl~g~~~-----e~e~~~~i~~~~~--~~~~l~~ 238 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIA---------KGYQVVLFGGPD-----EEERAEEIAKGLP--NAVILAG 238 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHH---------CCCEEEEecChH-----HHHHHHHHHHhcC--CccccCC
Confidence 467777788 665777765 45555554443 348899999762 5666666666554 2233777
Q ss_pred Cc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 346 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 346 ~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.. +++..+++.||++|-+.. ..+-=|.|.|+|+|+--...
T Consensus 239 k~sL~e~~~li~~a~l~I~~DS-------g~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 239 KTSLEELAALIAGADLVIGNDS-------GPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred CCCHHHHHHHHhcCCEEEccCC-------hHHHHHHHcCCCEEEEECCC
Confidence 64 899999999999997655 34566889999999865443
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0012 Score=49.06 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=29.0
Q ss_pred EEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 359 VLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 359 v~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+.+.|+. .++++..++|+||||+|||+++.++.
T Consensus 1 i~Ln~~~--~~~~~~r~~E~~a~G~~vi~~~~~~~ 33 (92)
T PF13524_consen 1 INLNPSR--SDGPNMRIFEAMACGTPVISDDSPGL 33 (92)
T ss_pred CEeeCCC--CCCCchHHHHHHHCCCeEEECChHHH
Confidence 4677888 89999999999999999999987653
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0051 Score=51.43 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=37.6
Q ss_pred CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 339 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.+|.+.++.+++.++++.||++|. -+-+.++.|++++|+|.|.-...+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDlvIs------~aG~~Ti~E~l~~g~P~I~ip~~~ 102 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADLVIS------HAGAGTIAEALALGKPAIVIPLPG 102 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSEEEE------CS-CHHHHHHHHCT--EEEE--TT
T ss_pred CcEEEEechhhHHHHHHHcCEEEe------CCCccHHHHHHHcCCCeeccCCCC
Confidence 689999999999999999999984 344588999999999998876655
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.81 Score=42.09 Aligned_cols=87 Identities=13% Similarity=-0.036 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecC
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS 364 (396)
++.+.+++..+.++ .+.+++++.-..+. +.+..++...++.-+.++......+++..+++.||++|-..
T Consensus 190 ~~~l~~~l~~l~~~--------~g~~v~~i~~~~~~---D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~R 258 (298)
T TIGR03609 190 LLRLLRALDRLQRD--------TGAFVLFLPFQQPQ---DLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMR 258 (298)
T ss_pred HHHHHHHHHHHHHh--------hCCeEEEEeCCcch---hHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEec
Confidence 44555555554331 25556555533222 34444445444433334432222368888999999888765
Q ss_pred CCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 365 QAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 365 ~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
. -.++=|+.+|+|+|+-.
T Consensus 259 l-------H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 259 L-------HALILAAAAGVPFVALS 276 (298)
T ss_pred h-------HHHHHHHHcCCCEEEee
Confidence 5 56889999999999763
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.097 Score=49.10 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=69.8
Q ss_pred HHHHHHHcCCCC-CCEEEEEEecc-cCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH
Q 016053 257 REHVRESLGVRN-EDLLFAIINSV-SRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 332 (396)
Q Consensus 257 ~~~~r~~~g~~~-~~~~il~vG~l-~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~ 332 (396)
.+.+...++++. +.++++..|.- .+.|.+. .+.+.++.+.+ .+.++++.|+.. +++..++..
T Consensus 161 ~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~---------~~~~ivl~G~~~-----e~~~~~~i~ 226 (334)
T TIGR02195 161 QAAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID---------QGYQVVLFGSAK-----DHPAGNEIE 226 (334)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH---------CCCEEEEEEChh-----hHHHHHHHH
Confidence 344566677654 45666666653 4677755 55555555432 357888888653 334444444
Q ss_pred HhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 333 MQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 333 ~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+..+ ...+.+.|.. .++..+++.||++|-+-. ..+-=|.|.|+|+|+--
T Consensus 227 ~~~~-~~~~~l~g~~sL~el~ali~~a~l~I~~DS-------Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 227 ALLP-GELRNLAGETSLDEAVDLIALAKAVVTNDS-------GLMHVAAALNRPLVALY 277 (334)
T ss_pred HhCC-cccccCCCCCCHHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEEE
Confidence 4332 1224466753 789999999999997544 34556789999999743
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.14 Score=48.34 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=66.6
Q ss_pred cCCCCCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 264 LGVRNEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 264 ~g~~~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
.+. ++.++++..|.-.+.|.+. .+.+.++.+.+ .++++++.|+..+. +.+..++..+.......+
T Consensus 179 ~~~-~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~---------~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~ 245 (352)
T PRK10422 179 LGV-TQNYVVIQPTARQIFKCWDNDKFSAVIDALQA---------RGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVT 245 (352)
T ss_pred cCC-CCCeEEEecCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEcCCChH---HHHHHHHHHHhcCCCccc
Confidence 344 3567777888766778765 45555554432 36788888753211 222234444332222345
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.+.|.. .++..+++.||++|-.-. ..+-=|.|+|+|+|+-=.
T Consensus 246 ~l~g~~sL~el~ali~~a~l~v~nDS-------Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 246 ALAGKTTFPELGALIDHAQLFIGVDS-------APAHIAAAVNTPLICLFG 289 (352)
T ss_pred cccCCCCHHHHHHHHHhCCEEEecCC-------HHHHHHHHcCCCEEEEEC
Confidence 677764 789999999999996444 345567789999997543
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.19 Score=45.58 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=64.3
Q ss_pred CCCEEEEEEecccCC-------CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCc
Q 016053 268 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 340 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-------Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (396)
.++..|++....... .....+++.+..+.+ +.|+++++|-=--........ +...+..-..+
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~-------~~p~~~lvvK~HP~~~~~~~~----~~~~~~~~~~~ 183 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAK-------ENPDAKLVVKPHPDERGGNKY----SYLEELPNLPN 183 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHH-------HCCCCEEEEEECchhhCCCCh----hHhhhhhcCCC
Confidence 455566677766543 245556666666544 237788776543210000011 22222211245
Q ss_pred EEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 341 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 341 V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+.++...-++.+++..||.++--+. .+-+||+.+|+||++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~VvtinS-------tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDAVVTINS-------TVGLEALLHGKPVIVFG 225 (269)
T ss_pred eEEECCCCCHHHHHHhCCEEEEECC-------HHHHHHHHcCCceEEec
Confidence 6676666789999999999886555 68899999999999853
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.13 Score=46.88 Aligned_cols=101 Identities=18% Similarity=0.101 Sum_probs=61.9
Q ss_pred EEEEEEecccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc-
Q 016053 271 LLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 347 (396)
Q Consensus 271 ~~il~vG~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~- 347 (396)
.+++..|.-.+.|.+ +.+.+.++.+.+ .+++++++|... +.+..++..+..+..+.+.+.|..
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~---------~~~~ivl~g~~~-----e~~~~~~i~~~~~~~~~~~~~~~~~ 188 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLA---------RGARVVLTGGPA-----ERELAEEIAAALGGPRVVNLAGKTS 188 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHH---------CCCEEEEEechh-----hHHHHHHHHHhcCCCccccCcCCCC
Confidence 344444444444443 455566655543 368888998643 444455555444322345566653
Q ss_pred -CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 -~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.|+..+++.||++|-+.. ..+.-|.+.|+|+|+--.+.
T Consensus 189 l~e~~~li~~~~l~I~~Ds-------g~~HlA~a~~~p~i~l~g~~ 227 (279)
T cd03789 189 LRELAALLARADLVVTNDS-------GPMHLAAALGTPTVALFGPT 227 (279)
T ss_pred HHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEEECCC
Confidence 789999999999997543 33445579999999865443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.24 Score=46.74 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=66.7
Q ss_pred HHHHHcCCC-CCCEEEEEEecc-cCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHh
Q 016053 259 HVRESLGVR-NEDLLFAIINSV-SRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 334 (396)
Q Consensus 259 ~~r~~~g~~-~~~~~il~vG~l-~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~ 334 (396)
...+.+++. ++.++.+..|.- .+.|.+. .+.+.++.+.+ .++++++.|+.. +++..++..+.
T Consensus 169 ~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~---------~~~~vvl~Gg~~-----e~~~~~~i~~~ 234 (348)
T PRK10916 169 ETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID---------EGYQVVLFGSAK-----DHEAGNEILAA 234 (348)
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEeCHH-----hHHHHHHHHHh
Confidence 345555553 345666666663 3567654 34555544432 467888888643 44444444443
Q ss_pred cCCC--Cc-EEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 335 KKIQ--DR-VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 335 ~~l~--~~-V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
.+-+ .+ +.+.|.. .++..+++.||++|-+-. ..+-=|.|.|+|+|+-
T Consensus 235 ~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDT-------Gp~HlAaA~g~P~val 286 (348)
T PRK10916 235 LNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVAL 286 (348)
T ss_pred cccccccceeeccCCCCHHHHHHHHHhCCEEEecCC-------hHHHHHHHhCCCEEEE
Confidence 3211 12 4566754 789999999999996544 3456688999999974
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.61 Score=47.54 Aligned_cols=130 Identities=16% Similarity=0.159 Sum_probs=78.2
Q ss_pred HHHHcC--CCCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHh-
Q 016053 260 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ- 334 (396)
Q Consensus 260 ~r~~~g--~~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~- 334 (396)
+++..| ++++...++++-|+..+|.+.. ++..+..+.+ +++. ..+..+..+++.|...+.+..- +++.+++.+
T Consensus 432 i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~r-ik~~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~v 509 (713)
T PF00343_consen 432 IKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNR-IKNNPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNV 509 (713)
T ss_dssp HHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHH-HHHSTTSCCS-EEEEEE----TT-HHH-HHHHHHHHHH
T ss_pred HHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHH-HHhcccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHH
Confidence 344445 5788899999999999999988 4444444433 3332 1122468899999887665422 333333322
Q ss_pred -------cCCCC--cEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 335 -------KKIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 335 -------~~l~~--~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
-.+.+ +|.|+..- .-...++.++||-...|..-.|..|..-+-+|.-|.+-++|--|
T Consensus 510 a~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG 577 (713)
T PF00343_consen 510 AEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDG 577 (713)
T ss_dssp HHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESST
T ss_pred HHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccc
Confidence 22334 78898753 45667889999999988866899999999999999999998655
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.4 Score=45.16 Aligned_cols=107 Identities=12% Similarity=0.023 Sum_probs=65.3
Q ss_pred HcCCCCCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCc
Q 016053 263 SLGVRNEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 340 (396)
Q Consensus 263 ~~g~~~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (396)
..+. ++.++++..|.-.+.|.+. .+.+.++.+. + .+.+++++|...+ .+.+..++..+..+-+..
T Consensus 176 ~~~~-~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~----~-----~~~~ivl~g~p~~---~e~~~~~~i~~~~~~~~~ 242 (344)
T TIGR02201 176 EAGV-GQNYIVIQPTSRWFFKCWDNDRFSALIDALH----A-----RGYEVVLTSGPDK---DELAMVNEIAQGCQTPRV 242 (344)
T ss_pred hcCC-CCCEEEEeCCCCccccCCCHHHHHHHHHHHH----h-----CCCeEEEecCCCH---HHHHHHHHHHhhCCCCcc
Confidence 3344 4456667777666667654 4444444432 2 3678888885321 122233443333332233
Q ss_pred EEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 341 VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 341 V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+.+.|.. .++..+++.||++|-+-. ..+-=|.|+|+|+|+-=
T Consensus 243 ~~l~g~~sL~el~ali~~a~l~Vs~DS-------Gp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 243 TSLAGKLTLPQLAALIDHARLFIGVDS-------VPMHMAAALGTPLVALF 286 (344)
T ss_pred cccCCCCCHHHHHHHHHhCCEEEecCC-------HHHHHHHHcCCCEEEEE
Confidence 5567764 789999999999997544 44566889999999753
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.28 Score=49.99 Aligned_cols=125 Identities=19% Similarity=0.094 Sum_probs=94.7
Q ss_pred CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccch---HHHHHHHHHHhcCCCCcEE
Q 016053 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK---FESELRNYVMQKKIQDRVH 342 (396)
Q Consensus 266 ~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~---~~~~l~~~~~~~~l~~~V~ 342 (396)
++++.+.++++=|+..+|.+...+.-+..+.+.++++ ..|.+.+++.|...+.+.. ....+...++..+...+|.
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d--~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKED--WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcC--CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEE
Confidence 4577899999999999999999988888887777632 3477888888987766532 2223444444444456788
Q ss_pred EecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 343 FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 343 ~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
|+..- .-...++.+|||=.+.|..-.|..|..-+-+|.-|.+-|+|--|-
T Consensus 561 Fl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGa 612 (750)
T COG0058 561 FLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGA 612 (750)
T ss_pred EeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccH
Confidence 98753 445667899999998887658999999999999999999986653
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.14 Score=45.57 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=59.1
Q ss_pred CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccch-HHHHHHHHHHhcCCCCcEEEec
Q 016053 267 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK-FESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 267 ~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~-~~~~l~~~~~~~~l~~~V~~~g 345 (396)
.++.++++..|.-.+.|.+.. +-+.++.+.+.+ ...+++++|+.. + +.+...+..+...- +.+.+.|
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~--e~~~~l~~~l~~-----~~~~vvl~g~~~----~~~~~~~~~~~~~~~~-~~~~~~~ 170 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPA--EKWAELIERLKE-----RGYRVVLLGGPE----EQEKEIADQIAAGLQN-PVINLAG 170 (247)
T ss_dssp TTSSEEEEE---SSGGGS--H--HHHHHHHHHHCC-----CT-EEEE--SSH----HHHHHHHHHHHTTHTT-TTEEETT
T ss_pred ccCCeEEEeecCCCccccCCH--HHHHHHHHHHHh-----hCceEEEEccch----HHHHHHHHHHHHhccc-ceEeecC
Confidence 356778888888778888665 333444444433 247888889763 1 12333334433221 2577777
Q ss_pred Cc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 346 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 346 ~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
.. .++..+++.||++|-+-. -.+-=|.|.|+|+|+-
T Consensus 171 ~~~l~e~~ali~~a~~~I~~Dt-------g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 KTSLRELAALISRADLVIGNDT-------GPMHLAAALGTPTVAL 208 (247)
T ss_dssp TS-HHHHHHHHHTSSEEEEESS-------HHHHHHHHTT--EEEE
T ss_pred CCCHHHHHHHHhcCCEEEecCC-------hHHHHHHHHhCCEEEE
Confidence 64 789999999999997554 4456688999999985
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.84 Score=45.24 Aligned_cols=162 Identities=15% Similarity=0.216 Sum_probs=100.1
Q ss_pred cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCcc--chhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEec
Q 016053 201 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSK--ELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 278 (396)
Q Consensus 201 ~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~--~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~ 278 (396)
...|.+++.+...--.+.+...++.-. .+....|+..-.. +..+|... -.|..+|++++.+++..+..
T Consensus 698 ~~mDYiITDs~tsPl~~a~~ysEkLv~-lPh~ffi~d~~qk~~~~~dpn~k---------P~r~~y~Lp~d~vvf~~FNq 767 (966)
T KOG4626|consen 698 TFMDYIITDSVTSPLELAQQYSEKLVY-LPHCFFIGDHKQKNQDVLDPNNK---------PTRSQYGLPEDAVVFCNFNQ 767 (966)
T ss_pred ceeeEEeecccCChHHHHHHHHHHHhh-CCceEEecCcccccccccCCCCC---------CCCCCCCCCCCeEEEeechh
Confidence 467888888877665555544444321 2234555432211 11122211 15788999888877776666
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC-CcEEEecCc--CCHHHHHH
Q 016053 279 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLA 355 (396)
Q Consensus 279 l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~~--~~~~~~~~ 355 (396)
+ .|=-...++....+.. ..|+-.|++.-.-.- -++.++..+++.|++ ++|+|..-. +|=..-..
T Consensus 768 L--yKidP~~l~~W~~ILk-------~VPnS~LwllrfPa~----ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~ 834 (966)
T KOG4626|consen 768 L--YKIDPSTLQMWANILK-------RVPNSVLWLLRFPAV----GEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQ 834 (966)
T ss_pred h--hcCCHHHHHHHHHHHH-------hCCcceeEEEecccc----chHHHHHHHHHhCCCccceeeccccchHHHHHhhh
Confidence 5 4444555666555544 237777777654221 237889999999987 678887743 55556678
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
-+||.+-+.. .-|- .+-.|.+-+|+|+|+-
T Consensus 835 LaDv~LDTpl--cnGh-TTg~dvLw~GvPmVTm 864 (966)
T KOG4626|consen 835 LADVCLDTPL--CNGH-TTGMDVLWAGVPMVTM 864 (966)
T ss_pred hhhhcccCcC--cCCc-ccchhhhccCCceeec
Confidence 8899987655 3322 3457899999999974
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.21 Score=46.35 Aligned_cols=259 Identities=12% Similarity=0.042 Sum_probs=125.0
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceE-EEEcCch----hhhhhccCCcEEEEcCch-
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-VISAKGQ----ETINTALKADLIVLNTAV- 160 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~DiV~~~~~~- 160 (396)
+|...+..-+.++|...||+++.+=........ ..+.....+.. ++.-... ....+..++|+|.+-...
T Consensus 14 ~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k-----~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~ 88 (373)
T COG4641 14 NGSAEYYRGLLRALKMDGMKVLFLESGDFWDYK-----NRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDD 88 (373)
T ss_pred CCchhhHHHHHHHHHhccceEEEEecccHHhhh-----cccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEecccc
Confidence 566688888999999999999988744331000 00111111211 1222221 233456899999765421
Q ss_pred ------hhHHHHHHHhcCCCccccceeeeeeecccccCchhhh----ccc-cccccceee-ccccHHHHHHHHHhhhccc
Q 016053 161 ------AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYV----KHL-PLVAGAMID-SHVTAEYWKNRTRERLRIK 228 (396)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~----~~~-~~~~~~~~~-s~~~~~~~~~~~~~~~g~~ 228 (396)
...+...+....+| ++++.-+.. +...... ..+ .+.+..... +.+.......++.+..+
T Consensus 89 ~~~~~~~~~~~a~l~~~~l~-----~~~w~te~p--~~~~~~~~~~~~~~~~~~l~~fd~v~~~g~~l~~~~yyq~~~-- 159 (373)
T COG4641 89 QPDEESTIDLWAWLKRKCLP-----VIVWYTEDP--YDTDIFSQVAEEQLARRPLFIFDNVLSFGGGLVANKYYQEGG-- 159 (373)
T ss_pred cccceehHHHHHHhhcCCcc-----eEEEEeccc--hhhhhhhhhhHHHhhccccchhhhhhhccchHHHHHHHHhhc--
Confidence 22232333334433 444444331 1111100 001 111111111 11111112233322222
Q ss_pred CCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCC
Q 016053 229 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS 308 (396)
Q Consensus 229 ~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~ 308 (396)
..+...+++++|.+.|.+.+... .-+-.+.++|+..+. .+..+-+.+..-...+. .+
T Consensus 160 ~~~~~~~~~a~d~~~~~~i~~da----------------~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~------v~ 216 (373)
T COG4641 160 ARNCYYLPWAVDDSLFHPIPPDA----------------SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKLM------VD 216 (373)
T ss_pred ccceeccCccCCchhcccCCccc----------------cceeeeEEecCCCcc-HHHHHHHHhhccchhhh------cc
Confidence 34578899999999887654211 122367788886554 22222222221100000 12
Q ss_pred EEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC---cCCHHHHHHHcCEEEecCCC-CCC-C--ccHHHHHHHhc
Q 016053 309 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK---TLTVAPYLAAIDVLVQNSQA-WGE-C--FGRITIEAMAF 381 (396)
Q Consensus 309 ~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~---~~~~~~~~~~aDv~v~pS~~-~~E-~--fg~~~lEAma~ 381 (396)
-++...|... -..+.... -.+++...|+ ...+..+++..|+.+.-++. ..+ + +.+-+.|+|+|
T Consensus 217 rr~~~~g~~y------~~~~~~~~----~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc 286 (373)
T COG4641 217 RRFYVLGPRY------PDDIWGRT----WEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC 286 (373)
T ss_pred ceeeecCCcc------chhhhccc----ccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc
Confidence 4566666642 11111111 1134455554 36788899999998765442 011 2 37889999999
Q ss_pred CCCEEEcCCCC
Q 016053 382 QLPVLVLSELH 392 (396)
Q Consensus 382 G~PVI~t~~gG 392 (396)
|.|.|+....|
T Consensus 287 ~~~liT~~~~~ 297 (373)
T COG4641 287 GGFLITDYWKD 297 (373)
T ss_pred CCccccccHHH
Confidence 99999876543
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.27 Score=50.63 Aligned_cols=130 Identities=18% Similarity=0.161 Sum_probs=93.0
Q ss_pred HHHHcC--CCCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHhc
Q 016053 260 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 335 (396)
Q Consensus 260 ~r~~~g--~~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~ 335 (396)
++++.| ++++.+.++++-|+..+|.+.. ++..+..+.+. +++ .....+..+++.|...+++. .-+.+.+++...
T Consensus 515 i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i-~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~v 592 (794)
T TIGR02093 515 IKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRI-KEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSV 592 (794)
T ss_pred HHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHH-HhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHH
Confidence 444555 4678888999999999999999 77777766543 322 00112568889998776653 334444444443
Q ss_pred C--------CCC--cEEEecC--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 336 K--------IQD--RVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 336 ~--------l~~--~V~~~g~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
. +.+ +|.|+.. +.-...++.+|||-.+.|.+-.|..|..-+-+|.-|.+.++|--|
T Consensus 593 a~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDG 660 (794)
T TIGR02093 593 AEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDG 660 (794)
T ss_pred HHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccc
Confidence 3 444 7888875 355677899999999888866899999999999999999998544
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.41 Score=44.48 Aligned_cols=99 Identities=15% Similarity=0.052 Sum_probs=63.7
Q ss_pred CCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec
Q 016053 268 NEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
+++++++..|.-.+.|.+. .+.+.++.+.+ .+.++++.|+++ ++.+..++..+..+ +..+.|
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~---------~~~~~vl~~g~~----~e~~~~~~i~~~~~---~~~l~g 241 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA---------RGLQIVLPWGND----AEKQRAERIAEALP---GAVVLP 241 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH---------CCCeEEEeCCCH----HHHHHHHHHHhhCC---CCeecC
Confidence 4566777777656777763 55555555532 367778875443 23344455444332 235667
Q ss_pred Cc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 346 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 346 ~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.. .++..+++.||++|-+-. ..+-=|.|+|+|+|+-=
T Consensus 242 ~~sL~el~ali~~a~l~I~~DS-------gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 242 KMSLAEVAALLAGADAVVGVDT-------GLTHLAAALDKPTVTLY 280 (319)
T ss_pred CCCHHHHHHHHHcCCEEEeCCC-------hHHHHHHHcCCCEEEEE
Confidence 54 789999999999997544 34556778899999854
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.5 Score=48.86 Aligned_cols=131 Identities=17% Similarity=0.121 Sum_probs=92.7
Q ss_pred HHHHcC--CCCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHh-
Q 016053 260 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ- 334 (396)
Q Consensus 260 ~r~~~g--~~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~- 334 (396)
++++.| ++++.+.++++-|+..+|.+.. ++..+..+.+. +++ ..+..+..+++.|...+++.. -..+.+++.+
T Consensus 531 i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i-~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~v 608 (815)
T PRK14986 531 IAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRI-KADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDV 608 (815)
T ss_pred HHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHH-HhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHH
Confidence 344445 5778899999999999999999 88777776543 322 001135789999987766542 2333333322
Q ss_pred -------cCCCC--cEEEecC--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 335 -------KKIQD--RVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 335 -------~~l~~--~V~~~g~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
-.+.+ +|.|+.. ++-...++.+|||-.+.|..-.|..|..-+-+|.-|.+.++|--|-
T Consensus 609 a~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~ 677 (815)
T PRK14986 609 AKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGA 677 (815)
T ss_pred HHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCc
Confidence 22334 6888875 3556678999999999888668999999999999999999987663
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.44 Score=44.44 Aligned_cols=101 Identities=13% Similarity=0.014 Sum_probs=61.9
Q ss_pred CCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec
Q 016053 268 NEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
+++++++..|.-...|.+. .+.+.+..+.+ .+.++++.|+++ ++.+..++..+.. +.+.+.|
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~---------~~~~ivl~~G~~----~e~~~~~~i~~~~---~~~~l~g 240 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAP---------SGLRIKLPWGAE----HEEQRAKRLAEGF---PYVEVLP 240 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHH---------CCCeEEEeCCCH----HHHHHHHHHHccC---CcceecC
Confidence 4455555555544556654 45555555432 356777763332 2334444443322 3467777
Q ss_pred Cc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 346 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 346 ~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.. .++..+++.||++|-+.. ..+-=|.|+|+|+|+-=.+
T Consensus 241 ~~sL~elaali~~a~l~I~nDS-------Gp~HlA~A~g~p~valfGp 281 (322)
T PRK10964 241 KLSLEQVARVLAGAKAVVSVDT-------GLSHLTAALDRPNITLYGP 281 (322)
T ss_pred CCCHHHHHHHHHhCCEEEecCC-------cHHHHHHHhCCCEEEEECC
Confidence 64 789999999999997554 4456788999999985443
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.63 Score=48.16 Aligned_cols=130 Identities=17% Similarity=0.140 Sum_probs=91.9
Q ss_pred HHHHcC--CCCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHhc
Q 016053 260 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 335 (396)
Q Consensus 260 ~r~~~g--~~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~ 335 (396)
+++..| ++++.+.++++=|+..+|.+.. ++..+..+.+. +++ .....+..+++.|...+++. .-+.+.+++...
T Consensus 518 i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i-~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~v 595 (797)
T cd04300 518 IKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRI-KENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAV 595 (797)
T ss_pred HHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHH-HhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHH
Confidence 344445 4788899999999999999999 77777766543 322 00113478888888776653 333333333322
Q ss_pred --------CCCC--cEEEecC--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 336 --------KIQD--RVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 336 --------~l~~--~V~~~g~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.+.+ +|.|+.. +.-...++.+|||-.+.|.+-.|..|..-+-+|.-|.+.++|--|
T Consensus 596 a~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDG 663 (797)
T cd04300 596 ADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDG 663 (797)
T ss_pred HHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccc
Confidence 1334 6888875 355677899999999888866899999999999999999999554
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.35 Score=40.32 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=22.3
Q ss_pred ccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchh
Q 016053 202 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELM 244 (396)
Q Consensus 202 ~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~ 244 (396)
.+|..++.+...++.+-..+ .+|+.||+-|||++.+
T Consensus 135 ~~D~~isPT~wQ~~~fP~~~-------r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 135 QADAGISPTRWQRSQFPAEF-------RSKISVIHDGIDTDRF 170 (171)
T ss_pred hCCcCcCCCHHHHHhCCHHH-------HcCcEEeecccchhhc
Confidence 45555555555443332222 2679999999998764
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=93.59 E-value=1.9 Score=42.55 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=58.5
Q ss_pred EEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHH
Q 016053 275 IINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPY 353 (396)
Q Consensus 275 ~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~ 353 (396)
.-|.-. -.||-...++++.+. -.++..|.+... ....+-..++.+|+-. .+|...+
T Consensus 282 VyGK~~~~w~~k~~~l~~l~~~-----------~eih~tV~~~~~-----~~~~~P~~V~NHG~l~-------~~ef~~l 338 (559)
T PF15024_consen 282 VYGKERYMWKGKEKYLDVLHKY-----------MEIHGTVYDEPQ-----RPPNVPSFVKNHGILS-------GDEFQQL 338 (559)
T ss_pred EEccchhhhcCcHHHHHHHHhh-----------cEEEEEeccCCC-----CCcccchhhhhcCcCC-------HHHHHHH
Confidence 345433 367777777777653 467777765432 1223333344444321 3789999
Q ss_pred HHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 354 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 354 ~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
++.+.|+|=-... .| |-+.+||+|.|+|-|-.....|
T Consensus 339 L~~akvfiGlGfP-~E--gPaPlEAia~G~vFlNp~~~pp 375 (559)
T PF15024_consen 339 LRKAKVFIGLGFP-YE--GPAPLEAIANGCVFLNPRFNPP 375 (559)
T ss_pred HHhhhEeeecCCC-CC--CCChHHHHHcCCccccccCCCC
Confidence 9999999944332 33 4568999999999987765433
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.15 E-value=6 Score=35.21 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=69.2
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHh
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 334 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~ 334 (396)
++..++.+. .+..++-+++|.-.+.=.+ |.+.+....+.+.+.+ ....+++--+-- -.+..++.++.
T Consensus 150 ~e~~~~~~p-~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-----~g~~~lisfSRR-----Tp~~~~s~l~~ 218 (329)
T COG3660 150 REAFKHLLP-LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-----QGGSFLISFSRR-----TPDTVKSILKN 218 (329)
T ss_pred HHHHHhhCC-CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-----CCceEEEEeecC-----CcHHHHHHHHh
Confidence 344444433 3566777788876654443 4444444444444433 356666655432 23556666654
Q ss_pred -cCCCCcEEEecCc----CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 335 -KKIQDRVHFVNKT----LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 335 -~~l~~~V~~~g~~----~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+.-.. +.+.... .-..+++++||.+|.+-. .=...-||.+.|+||-+....+
T Consensus 219 ~l~s~~-~i~w~~~d~g~NPY~~~La~Adyii~TaD-----SinM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 219 NLNSSP-GIVWNNEDTGYNPYIDMLAAADYIISTAD-----SINMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred ccccCc-eeEeCCCCCCCCchHHHHhhcceEEEecc-----hhhhhHHHhccCCCeEEEecCC
Confidence 43333 3444332 346789999999997533 2244689999999998866554
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.5 Score=48.69 Aligned_cols=130 Identities=15% Similarity=0.113 Sum_probs=91.7
Q ss_pred HHHHcC--CCCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHhc
Q 016053 260 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 335 (396)
Q Consensus 260 ~r~~~g--~~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~ 335 (396)
++++.| ++++.+.++++-|+..+|.+.. ++..+..+.+. +++ .....+..+++.|...+++. .-+.+.+++...
T Consensus 517 i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i-~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~v 594 (798)
T PRK14985 517 VKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEI-RENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKV 594 (798)
T ss_pred HHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHH-HhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHH
Confidence 334445 5678889999999999999999 87777766543 332 00113478999998776653 233333333332
Q ss_pred C--------CCC--cEEEecC--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 336 K--------IQD--RVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 336 ~--------l~~--~V~~~g~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
. +.+ +|.|+.. +.-...++.+|||-.+.|.+-.|..|..-+-+|.-|.+.++|--|
T Consensus 595 a~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDG 662 (798)
T PRK14985 595 AEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 662 (798)
T ss_pred HHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccc
Confidence 1 223 6888875 355677899999999888866899999999999999999988655
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.65 Score=46.22 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=59.7
Q ss_pred CCCEEEEEEecccCC-CC----HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE
Q 016053 268 NEDLLFAIINSVSRG-KG----QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-Kg----~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~ 342 (396)
++..+++..|..... +. ...+++|++.+ +.++++..++. ..+ .++++||.
T Consensus 295 ~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l------------~~~viw~~~~~-----~~~--------~~~p~Nv~ 349 (507)
T PHA03392 295 TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL------------PYNVLWKYDGE-----VEA--------INLPANVL 349 (507)
T ss_pred CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC------------CCeEEEEECCC-----cCc--------ccCCCceE
Confidence 335777788886532 22 34445555432 35766665432 111 24568999
Q ss_pred EecCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 343 FVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 343 ~~g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+.++... .+++ ..++++| .-|-..++.||+.+|+|+|+-...+
T Consensus 350 i~~w~Pq-~~lL~hp~v~~fI------tHGG~~s~~Eal~~GvP~v~iP~~~ 394 (507)
T PHA03392 350 TQKWFPQ-RAVLKHKNVKAFV------TQGGVQSTDEAIDALVPMVGLPMMG 394 (507)
T ss_pred EecCCCH-HHHhcCCCCCEEE------ecCCcccHHHHHHcCCCEEECCCCc
Confidence 9998643 5677 4588888 3455678899999999999976643
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=92.82 E-value=1.4 Score=36.31 Aligned_cols=129 Identities=13% Similarity=0.076 Sum_probs=69.7
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
|+||++.+.. ||.- .....|++.+ .|+++++|-......+ ..+ |-.+ ...+.+.....+|+
T Consensus 1 M~ILlle~y~--ggSHk~~~~~L~~~~---~~~~~lltLP~r~w~W--------RmR--g~AL---~~a~~~~~~~~~dl 62 (168)
T PF12038_consen 1 MRILLLEPYY--GGSHKQWADGLAAHS---EHEWTLLTLPARKWHW--------RMR--GAAL---YFAQQIPLSHSYDL 62 (168)
T ss_pred CeEEEEcccc--ccCHHHHHHHHHHhc---cCCEEEEEcCCCcccc--------ccC--CCHH---HHhhccccccCCCE
Confidence 5899998533 5544 4455555554 4899999843222111 111 1111 01134455577899
Q ss_pred EEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-Cch--------hhhc--cccccccceeeccccHHHHHHHHH
Q 016053 154 IVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-FKL--------DYVK--HLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 154 V~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-~~~--------~~~~--~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
|++.+...-.-+..+.. .+. .++.+..+|+-.-.| ... .+.. ....+|.++.+|.+..+.+.+.+.
T Consensus 63 l~aTsmldLa~l~gL~p-~l~--~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~~~ 139 (168)
T PF12038_consen 63 LFATSMLDLATLRGLRP-DLA--NVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDGIP 139 (168)
T ss_pred EEeeccccHHHHHhhcc-CCC--CCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHHHH
Confidence 99998654433333332 221 245666788854221 111 1122 224688899999998887776655
Q ss_pred hh
Q 016053 223 ER 224 (396)
Q Consensus 223 ~~ 224 (396)
..
T Consensus 140 ~f 141 (168)
T PF12038_consen 140 SF 141 (168)
T ss_pred HH
Confidence 33
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.76 E-value=1.1 Score=46.14 Aligned_cols=155 Identities=16% Similarity=0.089 Sum_probs=101.9
Q ss_pred CEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEE
Q 016053 231 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH 310 (396)
Q Consensus 231 k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~ 310 (396)
.+..+|-|+|...|....+......-..+++..+ .++.+|+-+-++...||+..=+.++.++.+..++. ...+.
T Consensus 240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~---~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~---~~kVv 313 (732)
T KOG1050|consen 240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF---KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEW---IDKVV 313 (732)
T ss_pred eeeecccccchHHhhccccchhHHHHHHHHhhhc---cCCceEecccccccccCchHHHHHHHHHHHhChhh---hceEE
Confidence 3566788888888765433222233345565554 46778888999999999999999999988876653 24567
Q ss_pred EEEEecCCCccchHHHHHHHH----HHh----cCCC--CcEEEecC---cCCHHHHHHHcCEEEecCCCCCCCccHHHHH
Q 016053 311 AVIIGSDMNAQTKFESELRNY----VMQ----KKIQ--DRVHFVNK---TLTVAPYLAAIDVLVQNSQAWGECFGRITIE 377 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~----~~~----~~l~--~~V~~~g~---~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lE 377 (396)
++.+..+...+.+..++++.. +++ .+-. ..|+++-. ..++.+++..+|+.+..+. .+|..++.+|
T Consensus 314 liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~--rdGmnl~~~e 391 (732)
T KOG1050|consen 314 LIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSW--RDGMNLVFLE 391 (732)
T ss_pred EEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccc--ccccchhhhH
Confidence 777776554443322222222 221 1111 23443332 2678999999999999998 9999999999
Q ss_pred HHhcC----CCEEEcCCCCC
Q 016053 378 AMAFQ----LPVLVLSELHP 393 (396)
Q Consensus 378 Ama~G----~PVI~t~~gG~ 393 (396)
..+|. .+.|.+..-|.
T Consensus 392 ~i~~~~~~~~~lVlsef~G~ 411 (732)
T KOG1050|consen 392 YILCQENKKSVLVLSEFIGD 411 (732)
T ss_pred HHHhhcccCCceEEeeeccc
Confidence 99885 44555554443
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.36 Score=40.32 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=49.1
Q ss_pred hhhhccCCcEEEEcCchhhHH-HHHHHhcC-CCccccceeeeeeec---ccccCchhhhccccccccceeeccccHHHHH
Q 016053 144 TINTALKADLIVLNTAVAGKW-LDAVLKED-VPRVLPNVLWWIHEM---RGHYFKLDYVKHLPLVAGAMIDSHVTAEYWK 218 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~-~~~~~~~~-~~~~~~~vv~~~h~~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 218 (396)
.+.+..+||+|+|..+.+... +..++..+ .+. .+++..+-++ +..| ..+..|..++.+..+++.+.
T Consensus 83 ~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~--~p~~tvvTD~~~~H~~W-------~~~~~D~y~Vase~~~~~l~ 153 (169)
T PF06925_consen 83 RLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPN--IPVVTVVTDFDTVHPFW-------IHPGVDRYFVASEEVKEELI 153 (169)
T ss_pred HHHhhcCCCEEEECCcchhhhHHHHHHHhhcccC--CcEEEEEcCCCCCCcCe-------ecCCCCEEEECCHHHHHHHH
Confidence 344569999999999986665 55555443 222 2333323322 2222 22577888888887777665
Q ss_pred HHHHhhhcccCCCEEEEe
Q 016053 219 NRTRERLRIKMPDTYVVH 236 (396)
Q Consensus 219 ~~~~~~~g~~~~k~~vI~ 236 (396)
..|++++++.+..
T Consensus 154 -----~~Gi~~~~I~vtG 166 (169)
T PF06925_consen 154 -----ERGIPPERIHVTG 166 (169)
T ss_pred -----HcCCChhHEEEeC
Confidence 4689998887754
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.03 E-value=2.9 Score=33.70 Aligned_cols=100 Identities=13% Similarity=0.222 Sum_probs=61.8
Q ss_pred CEEEEEEecccCCCCHHHHHHHHH--HHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFY--ESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~--~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
.-+++.+|.-. .|.|+.++. ...+.++++| =.+|+| .|.|... ..+......+..++. |....+
T Consensus 4 ~~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G----~~kLiiQ~Grg~~~---~~d~~~~~~k~~gl~--id~y~f 70 (170)
T KOG3349|consen 4 MTVFVTVGTTS----FDDLISCVLSEEFLQELQKRG----FTKLIIQIGRGQPF---FGDPIDLIRKNGGLT--IDGYDF 70 (170)
T ss_pred eEEEEEecccc----HHHHHHHHcCHHHHHHHHHcC----ccEEEEEecCCccC---CCCHHHhhcccCCeE--EEEEec
Confidence 34677777732 788888763 4445566543 234444 6776321 112222222333432 555555
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
..++.++++.||+++. -+-.-+++|-+..|+|.|+-
T Consensus 71 ~psl~e~I~~AdlVIs------HAGaGS~letL~l~KPlivV 106 (170)
T KOG3349|consen 71 SPSLTEDIRSADLVIS------HAGAGSCLETLRLGKPLIVV 106 (170)
T ss_pred CccHHHHHhhccEEEe------cCCcchHHHHHHcCCCEEEE
Confidence 6899999999999993 23345789999999998864
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=91.80 E-value=8.9 Score=34.06 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=35.3
Q ss_pred CcEEEecC---cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 339 DRVHFVNK---TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 339 ~~V~~~g~---~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.++..... .+++.++++.+|++|-... -..+=|+++|+|+|+-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl-------H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQADLVISMRL-------HGAILALSLGVPVIAISY 284 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcCCEEEecCC-------HHHHHHHHcCCCEEEEec
Confidence 34444443 3789999999999998777 678889999999998654
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=91.49 E-value=13 Score=35.29 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=46.8
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
..+++...-.+.++ +....+.++....-..++++.... +++...++++|+.|-.=. -.++=||+.|+|
T Consensus 237 ~~~~i~~~~~~~s~---d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~-------HsaI~al~~g~p 306 (385)
T COG2327 237 ALWRITLIDYGASD---DLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL-------HSAIMALAFGVP 306 (385)
T ss_pred cceEEEeeeccccc---hhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh-------HHHHHHHhcCCC
Confidence 45555444433322 444455555544433677776543 567779999999886444 567889999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
+|+-.
T Consensus 307 ~i~i~ 311 (385)
T COG2327 307 AIAIA 311 (385)
T ss_pred eEEEe
Confidence 99854
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.78 Score=34.33 Aligned_cols=75 Identities=8% Similarity=0.132 Sum_probs=51.7
Q ss_pred EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC----c-C--CHHHHHHHcCEEEecCCCCCCC---ccHHHHHHHh
Q 016053 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK----T-L--TVAPYLAAIDVLVQNSQAWGEC---FGRITIEAMA 380 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~----~-~--~~~~~~~~aDv~v~pS~~~~E~---fg~~~lEAma 380 (396)
++|+|+-. .....+++.++++|.. ..++|. . . .++..+..+|++|++.. .=+ .-.+--+|-.
T Consensus 2 vliVGG~~----~~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~--~vsH~~~~~vk~~akk 73 (97)
T PF10087_consen 2 VLIVGGRE----DRERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTD--YVSHNAMWKVKKAAKK 73 (97)
T ss_pred EEEEcCCc----ccHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeC--CcChHHHHHHHHHHHH
Confidence 56777622 2678899999999865 333332 2 2 38889999999988766 222 2234457788
Q ss_pred cCCCEEEcCCCCC
Q 016053 381 FQLPVLVLSELHP 393 (396)
Q Consensus 381 ~G~PVI~t~~gG~ 393 (396)
.|+|++-++..|.
T Consensus 74 ~~ip~~~~~~~~~ 86 (97)
T PF10087_consen 74 YGIPIIYSRSRGV 86 (97)
T ss_pred cCCcEEEECCCCH
Confidence 8999999986664
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=90.36 E-value=2.2 Score=41.97 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=56.5
Q ss_pred CCCEEEEEEecccCC--CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec
Q 016053 268 NEDLLFAIINSVSRG--KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 268 ~~~~~il~vG~l~~~--Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
++..+++..|..... +-+..++++++. .+..++++..+. ...+.+.. .+++.+.+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~------------~~~~~lw~~~~~------~~~~~~~~-----~~~~~v~~ 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRD------------SGVRFLWVARGE------ASRLKEIC-----GDMGLVVP 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHh------------CCCCEEEEEcCc------hhhHhHhc-----cCCEEEec
Confidence 345777788886432 123333333332 466777765432 11122221 24677777
Q ss_pred CcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 346 KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 346 ~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+..+ .++++..++-.+-+ -|--++++||+++|+|+|+-...+
T Consensus 330 w~pQ-~~iL~h~~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~ 371 (459)
T PLN02448 330 WCDQ-LKVLCHSSVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFW 371 (459)
T ss_pred cCCH-HHHhccCccceEEe----cCchhHHHHHHHcCCCEEeccccc
Confidence 7643 46888888732222 344478899999999999976543
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=90.04 E-value=14 Score=33.24 Aligned_cols=269 Identities=13% Similarity=0.072 Sum_probs=121.2
Q ss_pred ChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-hhhhhccCCcEEEEcCchhhH---
Q 016053 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ-ETINTALKADLIVLNTAVAGK--- 163 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~DiV~~~~~~~~~--- 163 (396)
|+.+...+.-....+.|+++++++........+ -........+..+..... ..+.+-.++||+..++..+..
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~----dsH~~~~~si~k~~~~e~de~v~~vN~yDI~m~nSvPa~~vqE 77 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRP----DSHDSKSFSIPKYLAKEYDETVKKVNDYDIVMFNSVPATKVQE 77 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTT----TSSS-TTTEEEE-TTTHHHHHHHHHTSSSEEEEEE--BTTS-H
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCc----cccccceeeeehhhHHHHHHHHHHhhccCEEEEecccCchHHH
Confidence 677888889999999999999999543321110 111122233444433322 334455799999988732211
Q ss_pred -HH---HHHHhcCCCccccceeeeeeecccccCc--hhhhccccccccceeeccccH---HHHHHHHHhhhcc--cCCCE
Q 016053 164 -WL---DAVLKEDVPRVLPNVLWWIHEMRGHYFK--LDYVKHLPLVAGAMIDSHVTA---EYWKNRTRERLRI--KMPDT 232 (396)
Q Consensus 164 -~~---~~~~~~~~~~~~~~vv~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~g~--~~~k~ 232 (396)
.. ....+ +++.. .+++...|+....... ......++.+|.+.+.+...- ..+.+.+.+...+ +-+++
T Consensus 78 ~~iNnY~kii~-~Ik~~-ik~V~~~Hdh~~lsI~rn~~le~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~ 155 (355)
T PF11440_consen 78 AIINNYEKIIK-KIKPS-IKVVGFMHDHNKLSIDRNPYLEGTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLFDRIKKF 155 (355)
T ss_dssp HHHHHHHHHHH-CS-TT-SEEEEEE---SHHHHTTBSSHHHHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SSS-----
T ss_pred HHHHHHHHHHH-hcccc-ceeEEEeeccceeeccccccHHHHHHhhcEEEeccccchHHHHHHHhhccccCchhhhhhhc
Confidence 11 11222 23211 2456677776322111 123345567777777665432 1111222211110 11222
Q ss_pred EEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEE---EEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 233 YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF---AIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 233 ~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~i---l~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
..++|.=++. +-++.|..+-.+..++.. +|+||..-.||+..+++.-++.. +-+++
T Consensus 156 p~v~nfqpp~-------------~i~~~Rstywkd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~l--------K~~~~ 214 (355)
T PF11440_consen 156 PMVFNFQPPM-------------DINKYRSTYWKDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKIL--------KPAGF 214 (355)
T ss_dssp --EEE----B--------------HHHHHHHH---GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTT--------TTTT-
T ss_pred ceeeecCCcc-------------cHHHHHHHHhhhhHhhhcccceeeeeeeeecCcHHHhhhHHHhc--------CCcch
Confidence 3333321111 123345555544455555 89999999999999999988753 23788
Q ss_pred EEEEEecCCCccchHHHHHHHH-----------HHhcCC--CCcEEEecC-c-CCHHHHHHHcCEEEecCCC----CCCC
Q 016053 310 HAVIIGSDMNAQTKFESELRNY-----------VMQKKI--QDRVHFVNK-T-LTVAPYLAAIDVLVQNSQA----WGEC 370 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~-----------~~~~~l--~~~V~~~g~-~-~~~~~~~~~aDv~v~pS~~----~~E~ 370 (396)
+-++-|-.. ++.... +.+. +.+..+ ..-+-.+|. + +|+.+.++.+-..+.-+.. =.+.
T Consensus 215 ~t~~~Gier--S~A~~~-i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~ 291 (355)
T PF11440_consen 215 KTIMEGIER--SPAKIS-IKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRS 291 (355)
T ss_dssp EEEEE---S--STHHHH-HHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS-
T ss_pred hHHhhhhhc--CCceee-eecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhh
Confidence 888888532 121111 1111 001111 123555665 2 7888888888777655442 1335
Q ss_pred ccHHHHHHHhcCC-CEE
Q 016053 371 FGRITIEAMAFQL-PVL 386 (396)
Q Consensus 371 fg~~~lEAma~G~-PVI 386 (396)
+-.+-+|..|||. ||.
T Consensus 292 mEYt~iE~~A~GtIPVF 308 (355)
T PF11440_consen 292 MEYTQIELIAVGTIPVF 308 (355)
T ss_dssp --HHHHHHHHCTSEEEE
T ss_pred hhhheeeeeeeceeeee
Confidence 6678999999995 444
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=89.83 E-value=1.3 Score=37.99 Aligned_cols=38 Identities=18% Similarity=0.099 Sum_probs=27.4
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+..... ..-+..|.++|++.||+|+|+++...
T Consensus 1 M~ILlTNDDGi~---a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGID---APGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TT---SHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCCCCC---CHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 589987753221 26788899999888899999996543
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=89.49 E-value=0.8 Score=33.18 Aligned_cols=46 Identities=15% Similarity=0.144 Sum_probs=30.4
Q ss_pred hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccc
Q 016053 142 QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG 189 (396)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~ 189 (396)
.|.+..++++||||.|+..+..........+ ..+.+.+++.|...+
T Consensus 42 ~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~--~mGlktVfTDHSLfg 87 (90)
T PF08288_consen 42 LRNILIRERIDIVHGHQAFSTLCHEAILHAR--TMGLKTVFTDHSLFG 87 (90)
T ss_pred HHHHHHHcCeeEEEeehhhhHHHHHHHHHHH--hCCCcEEeecccccc
Confidence 3566678999999999977665444433322 112458899997643
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PRK09739 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.96 E-value=0.96 Score=38.90 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=30.9
Q ss_pred ccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|+|||||+|......+|.. .....+++.+.+.|++|.++-
T Consensus 1 ~~mmkiliI~~sp~~~s~s~~l~~~~~~~~~~~g~~v~~~d 41 (199)
T PRK09739 1 MQSMRIYLVWAHPRHDSLTAKVAEAIHQRAQERGHQVEELD 41 (199)
T ss_pred CCCceEEEEEcCCCCCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 5567999998655555543 777888889999999999886
|
|
| >PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes | Back alignment and domain information |
|---|
Probab=88.27 E-value=1.7 Score=36.23 Aligned_cols=79 Identities=20% Similarity=0.162 Sum_probs=45.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh-hccCCcE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-TALKADL 153 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Di 153 (396)
++|++++...+.|| --.-+++.|.+.|++|+++.........+......+.+...++.+.......... ....+|+
T Consensus 26 ~~v~il~G~GnNGg---Dgl~~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dl 102 (169)
T PF03853_consen 26 PRVLILCGPGNNGG---DGLVAARHLANRGYNVTVYLVGPPEKLSEDAKQQLEILKKMGIKIIELDSDEDLSEALEPADL 102 (169)
T ss_dssp -EEEEEE-SSHHHH---HHHHHHHHHHHTTCEEEEEEEESSSSTSHHHHHHHHHHHHTT-EEESSCCGSGGGHHGSCESE
T ss_pred CeEEEEECCCCChH---HHHHHHHHHHHCCCeEEEEEEeccccCCHHHHHHHHHHHhcCCcEeeccccchhhcccccccE
Confidence 47888886555555 5566789999999999996643332222333233345566677776654443322 2236777
Q ss_pred EEE
Q 016053 154 IVL 156 (396)
Q Consensus 154 V~~ 156 (396)
|+-
T Consensus 103 IID 105 (169)
T PF03853_consen 103 IID 105 (169)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
|
In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A .... |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.25 E-value=1.3 Score=35.31 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=33.4
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ 142 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (396)
+|--.=...++++|+++||||.+.+... +.+.....|++.......
T Consensus 9 ~Ghv~P~lala~~L~~rGh~V~~~~~~~----------~~~~v~~~Gl~~~~~~~~ 54 (139)
T PF03033_consen 9 RGHVYPFLALARALRRRGHEVRLATPPD----------FRERVEAAGLEFVPIPGD 54 (139)
T ss_dssp HHHHHHHHHHHHHHHHTT-EEEEEETGG----------GHHHHHHTT-EEEESSSC
T ss_pred hhHHHHHHHHHHHHhccCCeEEEeeccc----------ceecccccCceEEEecCC
Confidence 4444778899999999999999888543 555667788888776554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=88.03 E-value=3.7 Score=40.68 Aligned_cols=48 Identities=13% Similarity=-0.020 Sum_probs=34.7
Q ss_pred CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 339 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.+++..++..+ .++++.+++-.+-+. |--++++||+++|+|+|+....
T Consensus 345 ~g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~ 392 (482)
T PLN03007 345 KGLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVG 392 (482)
T ss_pred CCEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccch
Confidence 57888888754 578888887333233 3347889999999999987653
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.37 E-value=4.5 Score=39.94 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=29.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+++- +..-|.-.-+.+|++.|..+|+.|++++..
T Consensus 10 ~HVvl~P--fpaqGHi~P~l~LAk~La~~G~~VTfv~T~ 46 (477)
T PLN02863 10 THVLVFP--FPAQGHMIPLLDLTHRLALRGLTITVLVTP 46 (477)
T ss_pred CEEEEec--CcccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4677665 334567788999999999999999999854
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=86.46 E-value=8.7 Score=32.61 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhh-hcceEEEEcCc---hhhhhhccCCcEEEEcCc-h
Q 016053 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISAKG---QETINTALKADLIVLNTA-V 160 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~DiV~~~~~-~ 160 (396)
|--..+..|++.|.++ |+.+.+-+...... . ...+.+. .....+++... .+.+....+||+++.... .
T Consensus 32 GE~~a~~~Li~~l~~~~p~~~illT~~T~tg~--~---~~~~~~~~~v~~~~~P~D~~~~~~rfl~~~~P~~~i~~EtEl 106 (186)
T PF04413_consen 32 GEVNAARPLIKRLRKQRPDLRILLTTTTPTGR--E---MARKLLPDRVDVQYLPLDFPWAVRRFLDHWRPDLLIWVETEL 106 (186)
T ss_dssp HHHHHHHHHHHHHTT---TS-EEEEES-CCHH--H---HHHGG-GGG-SEEE---SSHHHHHHHHHHH--SEEEEES---
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEecCCchH--H---HHHHhCCCCeEEEEeCccCHHHHHHHHHHhCCCEEEEEcccc
Confidence 4349999999999997 77777766432210 0 0111111 12234444443 255666789999976652 2
Q ss_pred hhHHHHHHHhcCCCccccceeeeeeeccc-----ccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEE
Q 016053 161 AGKWLDAVLKEDVPRVLPNVLWWIHEMRG-----HYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV 235 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~vv~~~h~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI 235 (396)
-.-.+..+.+.++|.. +........ .++.......+...+.+.+.+....+.+. ..|.+++++.+.
T Consensus 107 WPnll~~a~~~~ip~~----LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~-----~lG~~~~~v~v~ 177 (186)
T PF04413_consen 107 WPNLLREAKRRGIPVV----LVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSEADAERFR-----KLGAPPERVHVT 177 (186)
T ss_dssp -HHHHHH-----S-EE----EEEE--------------HHHHHHGGG-SEEEESSHHHHHHHH-----TTT-S--SEEE-
T ss_pred CHHHHHHHhhcCCCEE----EEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCcceEEEe
Confidence 2334455666676642 211221111 11222344455677888888877776655 678888899987
Q ss_pred ec
Q 016053 236 HL 237 (396)
Q Consensus 236 ~n 237 (396)
.|
T Consensus 178 Gn 179 (186)
T PF04413_consen 178 GN 179 (186)
T ss_dssp --
T ss_pred Cc
Confidence 75
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E | Back alignment and domain information |
|---|
Probab=85.89 E-value=8 Score=33.59 Aligned_cols=85 Identities=11% Similarity=0.077 Sum_probs=55.4
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHHcCEEEecCCC-------CCC-CccHHHHH
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA-------WGE-CFGRITIE 377 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~-~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~-------~~E-~fg~~~lE 377 (396)
.+.++.++........++...+.+..+++ |....+...-..++..+.+..||++++|--. |.+ ++--.+-|
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~ 109 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILKA 109 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHHH
Confidence 46788888877654455677777777878 7643222222235678899999999998531 222 22333456
Q ss_pred HHhcCCCEEEcCCC
Q 016053 378 AMAFQLPVLVLSEL 391 (396)
Q Consensus 378 Ama~G~PVI~t~~g 391 (396)
+...|+|++.+..|
T Consensus 110 ~~~~g~~i~G~SAG 123 (212)
T cd03146 110 ALERGVVYIGWSAG 123 (212)
T ss_pred HHHCCCEEEEECHh
Confidence 66789999988765
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=83.30 E-value=13 Score=36.80 Aligned_cols=106 Identities=15% Similarity=0.091 Sum_probs=56.7
Q ss_pred HHHHHcCC-CCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCC
Q 016053 259 HVRESLGV-RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 337 (396)
Q Consensus 259 ~~r~~~g~-~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l 337 (396)
++.+-+.- .++..+++..|.+.. ...+..++++.+..+. .|+ ++++.-++. .... +
T Consensus 265 ~~~~~~~~~~~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~-------~~~-~~iW~~~~~-----~~~~---------l 321 (500)
T PF00201_consen 265 ELWNFLDSSGKKGVVYVSFGSIVS-SMPEEKLKEIAEAFEN-------LPQ-RFIWKYEGE-----PPEN---------L 321 (500)
T ss_dssp HHHHHTSTTTTTEEEEEE-TSSST-T-HHHHHHHHHHHHHC-------STT-EEEEEETCS-----HGCH---------H
T ss_pred ccchhhhccCCCCEEEEecCcccc-hhHHHHHHHHHHHHhh-------CCC-ccccccccc-----cccc---------c
Confidence 34444433 245677777888753 2344444444443331 255 777765542 1111 2
Q ss_pred CCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 338 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 338 ~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
++|+....+..+ .++++...+-++-+. |--++++||+.+|+|+|+-..-|
T Consensus 322 ~~n~~~~~W~PQ-~~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~ 371 (500)
T PF00201_consen 322 PKNVLIVKWLPQ-NDLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFG 371 (500)
T ss_dssp HTTEEEESS--H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCST
T ss_pred cceEEEeccccc-hhhhhcccceeeeec----cccchhhhhhhccCCccCCCCcc
Confidence 267888887654 478877666444343 45578999999999999976543
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=83.16 E-value=3.2 Score=32.63 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=32.2
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++.+++..+|++|--|. .+..--.+-.++.+|+|+|...+|.
T Consensus 59 ~~l~~~~~~~DVvIDfT~--p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTN--PDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp S-HHHHTTH-SEEEEES---HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred hhHHHhcccCCEEEEcCC--hHHhHHHHHHHHhCCCCEEEECCCC
Confidence 678999999999998888 7777677778899999999977764
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=82.72 E-value=11 Score=37.03 Aligned_cols=48 Identities=15% Similarity=0.082 Sum_probs=34.6
Q ss_pred CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 339 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++...++..+ .++++.+++-.+-+. +--++++||+++|+|+|+....
T Consensus 334 ~g~~v~~W~PQ-~~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~ 381 (451)
T PLN03004 334 KGMVVKSWAPQ-VPVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLY 381 (451)
T ss_pred CcEEEEeeCCH-HHHhCCCccceEecc----CcchHHHHHHHcCCCEEecccc
Confidence 46777777644 468999998333233 3447899999999999987653
|
|
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=82.05 E-value=47 Score=31.50 Aligned_cols=105 Identities=17% Similarity=0.121 Sum_probs=64.7
Q ss_pred HhHHHHHHHcCCC---CCCEEEEEEecccCCCC-HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHH
Q 016053 255 VLREHVRESLGVR---NEDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 330 (396)
Q Consensus 255 ~~~~~~r~~~g~~---~~~~~il~vG~l~~~Kg-~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~ 330 (396)
..+..+.+++|++ ++...|. -+.+.+. +..++++.+.. ...+.++|.++- -...+.+
T Consensus 166 ~~~~~~~~~lg~~~~~~~~~~vs---lF~Ye~~~l~~ll~~~~~~----------~~pv~llvp~g~------~~~~~~~ 226 (374)
T PF10093_consen 166 AARAAFLRRLGLPEPEPGALRVS---LFCYENAALASLLDAWAAS----------PKPVHLLVPEGR------ALNSLAA 226 (374)
T ss_pred HHHHHHHHHcCCCCCCCCCeEEE---EEeCCchHHHHHHHHHhcC----------CCCeEEEecCCc------cHHHHHH
Confidence 3467788899985 3444433 3344555 78888887752 256777777753 2333332
Q ss_pred HHH----------hcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 331 YVM----------QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 331 ~~~----------~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
... +.| .-.++.++++ ++..+++-.||+-+.- +|- +.+=|.-+|+|.|
T Consensus 227 ~~~~~~~~~g~~~~~g-~l~l~~lPF~~Q~~yD~LLw~cD~NfVR----GED---SfVRAqwAgkPFv 286 (374)
T PF10093_consen 227 WLGDALLQAGDSWQRG-NLTLHVLPFVPQDDYDRLLWACDFNFVR----GED---SFVRAQWAGKPFV 286 (374)
T ss_pred HhccccccCccccccC-CeEEEECCCCCHHHHHHHHHhCccceEe----cch---HHHHHHHhCCCce
Confidence 222 111 1256777775 7899999999997753 332 3566778888876
|
The function is unknown. |
| >cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins | Back alignment and domain information |
|---|
Probab=81.26 E-value=16 Score=31.59 Aligned_cols=85 Identities=11% Similarity=0.041 Sum_probs=57.6
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC---cCCHHHHHHHcCEEEecCCC-------CCCC-ccHHH
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK---TLTVAPYLAAIDVLVQNSQA-------WGEC-FGRIT 375 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~---~~~~~~~~~~aDv~v~pS~~-------~~E~-fg~~~ 375 (396)
.+.++.++........++.+.+.+..+++|........-. .+++.+.+..||+++++--. |.+. .--.+
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 4677788876654444567778888888887643333321 26788899999999886431 3333 33357
Q ss_pred HHHHhcCCCEEEcCCC
Q 016053 376 IEAMAFQLPVLVLSEL 391 (396)
Q Consensus 376 lEAma~G~PVI~t~~g 391 (396)
.|....|+|++.+..|
T Consensus 108 ~~~~~~G~v~~G~SAG 123 (210)
T cd03129 108 LKRVARGVVIGGTSAG 123 (210)
T ss_pred HHHHHcCCeEEEcCHH
Confidence 8888889999988765
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=80.20 E-value=17 Score=36.13 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=34.0
Q ss_pred CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 339 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++...|+..+ .+++...++-.+- ..+-.++++||+++|+|+|+-...
T Consensus 344 ~g~~v~~w~pq-~~iL~h~~v~~fv----tH~G~ns~~ea~~~GvP~v~~P~~ 391 (491)
T PLN02534 344 RGLLIKGWAPQ-VLILSHPAIGGFL----THCGWNSTIEGICSGVPMITWPLF 391 (491)
T ss_pred CCeeccCCCCH-HHHhcCCccceEE----ecCccHHHHHHHHcCCCEEecccc
Confidence 45666777654 5688888883222 334457899999999999987653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 4e-18
Identities = 57/355 (16%), Positives = 117/355 (32%), Gaps = 52/355 (14%)
Query: 51 KKRVQSQSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110
K + + V +I K+ L + V+ G +L L LLR +G + W
Sbjct: 20 KSIIGEEEVSKIQEKAEKLKGRS---FVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWF 76
Query: 111 TIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL----------KADLIVLNTAV 160
I+ P+E V + + + ++ + +E D ++++
Sbjct: 77 VIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQ 136
Query: 161 AGKWLDAVLKEDVPRVLPNVLWWIHEM--RGHYFKLDYVKHLPLVAGAMIDSHVTAEYWK 218
L ++ P + W H + ++++ I H+
Sbjct: 137 PA-ALIEFYEKKSPWL-----WRCHIDLSSPNREFWEFLRRFVEKYDRYI-FHLPEYVQP 189
Query: 219 NRTRERLRIKMPDTYVVHLG---NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275
R + ++ S++ +E+ + + + + E V E +
Sbjct: 190 ELDRNKAV-------IMPPSIDPLSEKNVELKQTEILR------ILERFDVDPEKPIITQ 236
Query: 276 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS----DMNAQTKFESELRNY 331
++ KG + + + E ++P V +++G D FE LR
Sbjct: 237 VSRFDPWKGIFDVIEIYRKVKE-------KIPGVQLLLVGVMAHDDPEGWIYFEKTLRKI 289
Query: 332 VMQKKIQDRVHFVNK-TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385
++ + + V + A DV++Q S E FG EAM PV
Sbjct: 290 GEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS--IREGFGLTVTEAMWKGKPV 342
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 36/240 (15%), Positives = 84/240 (35%), Gaps = 31/240 (12%)
Query: 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVL----WWIHEMRGHYFKLDYVKHLPLVAG 205
D++ ++ A+ + K+ + + V I + + ++ +
Sbjct: 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSD 158
Query: 206 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG 265
+ + N T E ++ D V+ + + + +++ G
Sbjct: 159 VVT---AVSHSLINETHELVKPN-KDIQTVYNFIDERVYFKRD--------MTQLKKEYG 206
Query: 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFE 325
+ + + I++ + K + +F + + + +++G
Sbjct: 207 ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVD--------AKLLLVGD-----GPEF 253
Query: 326 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385
+ V I+DRV F+ K VA LA D+++ S E FG + +EAMA +P
Sbjct: 254 CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLS--EKESFGLVLLEAMACGVPC 311
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 7e-11
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 14/131 (10%)
Query: 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 316
RE R+ G++ + L + S KG D + + E + + +
Sbjct: 183 REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPE-------SLRHNTLLFVVG 235
Query: 317 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 376
+ + + ++ VHF + V+ +AA D+L+ + + E G + +
Sbjct: 236 QDKPR-----KFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA--YQEAAGIVLL 288
Query: 377 EAMAFQLPVLV 387
EA+ LPVL
Sbjct: 289 EAITAGLPVLT 299
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 3e-09
Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 16/105 (15%)
Query: 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 342
K Q + + + L K K + ++ G E +++ + ++
Sbjct: 15 KNQSVLIKAV----ALSKYK----QDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFG 61
Query: 343 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
FVN + L + V + E +EA++ + ++
Sbjct: 62 FVNSN-ELLEILKTCTLYVHAANV--ESEAIACLEAISVGIVPVI 103
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 5e-07
Identities = 51/374 (13%), Positives = 110/374 (29%), Gaps = 107/374 (28%)
Query: 49 SDKKRVQSQSVPRIATKSSPLSFMKSKLVLLVSHE-LSLSGGP------LLLMELAF--L 99
+D + +V R+ P ++ L+ L + + + G + L +
Sbjct: 121 NDNQVFAKYNVSRL----QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 100 LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD------- 152
+ K+ W+ ++ + + V+ L+ K+ + +++ + N L+
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQ-KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 153 -----------LIVLNTAVAGKWL---------------DAVLKEDVPRVLPNVLWWIHE 186
L+VL V + + + + H
Sbjct: 236 RLLKSKPYENCLLVLLN-VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 187 MRGHYFKLDYVKHL--------------------PLV---AGAMI-DSHVTAEYWKNRTR 222
D VK L P I D T + WK+
Sbjct: 295 SMT--LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV----------------RESLGV 266
++L + ++ + L E ++ + V + + V
Sbjct: 353 DKLTTII-ESSLNVL-EPAEYRKMFDRLS---VFPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 267 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFES 326
N+ ++++ + K + + S Y LEL K K ++H I+ N F+S
Sbjct: 408 VNKLHKYSLVE--KQPKESTISIPSIY--LEL-KVKLENEYALHRSIVDHY-NIPKTFDS 461
Query: 327 E------LRNYVMQ 334
+ L Y
Sbjct: 462 DDLIPPYLDQYFYS 475
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 40/297 (13%), Positives = 92/297 (30%), Gaps = 71/297 (23%)
Query: 99 LLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNT 158
+ + + +K I + L + + +++ Q+ + L+ +
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV----QKFVEEVLRINY----- 91
Query: 159 AVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYW 217
K+L + E + ++ ++ L +V+
Sbjct: 92 ----KFLMSPIKTEQRQPSMMTRMY-----------IEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 218 KNRTRERLRIKMPDTYV-VH--LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 274
+ R+ L P V + LG+ K + A V + + + + +F
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWV-------ALDVCLSYKVQC---KMDFKIFW 186
Query: 275 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 334
+ ++ + L + L + S H+ I +++ ++ELR +
Sbjct: 187 L--NLKNCNSPETVLEML-QKLLYQIDPNWTSRSDHSSNIKLRIHS---IQAELRRLLKS 240
Query: 335 KKIQDRVHFVNKTLTVAPYLAAIDVL--VQNSQAWGECFGRITIEAMAFQLPVLVLS 389
K PY + VL VQN++AW A +L+ +
Sbjct: 241 K----------------PYENCLLVLLNVQNAKAW---------NAFNLSCKILLTT 272
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 49.8 bits (118), Expect = 8e-07
Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 16/229 (6%)
Query: 166 DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERL 225
D V+ + P V+ N L + + + YV + + +W + +
Sbjct: 83 DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVS-------KNIRENLWWIFSHPKVV 135
Query: 226 RI----KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 281
+ K + + + G + V+ K + L N+D+LF +N +
Sbjct: 136 GVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTA 195
Query: 282 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341
K D+++ + + + K+ D+++ E +++
Sbjct: 196 RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKI 255
Query: 342 HFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
LT V A DV+V S GE FG + E P+++
Sbjct: 256 MINRTVLTDERVDMMYNACDVIVNCS--SGEGFGLCSAEGAVLGKPLII 302
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 29/186 (15%)
Query: 211 HVTA--EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 268
+T +Y R + P + G ++V A + R+ LG +
Sbjct: 143 VLTYISQYTLRRFKSAFGSH-PTFEHLPSG-----VDVKRFTPATPEDKSATRKKLGFTD 196
Query: 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL 328
+ A + + KGQD + +++ + P +I+GS ++ES L
Sbjct: 197 TTPVIACNSRLVPRKGQDSLI----KAMPQVIA---ARPDAQLLIVGSG-----RYESTL 244
Query: 329 RNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLV-----QNSQAWGECFGRITIEAMAF 381
R + V F+ + + LAA D+ + E G + +EA A
Sbjct: 245 RRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC 302
Query: 382 QLPVLV 387
+PV+
Sbjct: 303 GVPVIA 308
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 5e-06
Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 23/153 (15%)
Query: 248 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 307
E+ + V + L + + +LF + + R K + + ++ L
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEWYGKNTRL-------RE 602
Query: 308 SVHAVIIG------SDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAP-------YL 354
+ V++G S N + ++ + + + K+ + +++ +
Sbjct: 603 LANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC 662
Query: 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387
VQ + E FG +EAM LP
Sbjct: 663 DTKGAFVQPA--LYEAFGLTVVEAMTCGLPTFA 693
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 18/140 (12%)
Query: 254 RVLREHVRESLGVRNEDLLFAIINSVSR---GKGQDLFLHSFYESLELIKEKKLEVPSVH 310
E R LG+ + A V R KG + + + + ++ L V
Sbjct: 227 DRATERSRRELGIPLHTKVVA---FVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV---- 279
Query: 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLVQNSQAW 367
+I G + R+ + ++ R+ F+ + A D++ S +
Sbjct: 280 -IICGGPSGPNATPD-TYRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPS--F 334
Query: 368 GECFGRITIEAMAFQLPVLV 387
E FG + +EA A PV+
Sbjct: 335 NESFGLVAMEAQASGTPVIA 354
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 1e-04
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 22/123 (17%)
Query: 267 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG--SDMNAQTKF 324
+ + +N + K +L L F + ++++KL I+G S + ++
Sbjct: 20 KCYGDFWLSVNRIYPEKRIELQLEVFKK----LQDEKL-------YIVGWFSKGDHAERY 68
Query: 325 ESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 382
++ K D V F+ + + L+ + E FG IEAMA
Sbjct: 69 ARKIM-----KIAPDNVKFLGSVSEEELIDLYSRCKGLLCTA--KDEDFGLTPIEAMASG 121
Query: 383 LPV 385
PV
Sbjct: 122 KPV 124
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 4e-04
Identities = 37/324 (11%), Positives = 83/324 (25%), Gaps = 47/324 (14%)
Query: 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG-- 133
L++ ++ + GG ++L K I ++ K
Sbjct: 51 LLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEED 110
Query: 134 ----VQVISAKGQETINTAL-KADLIVLN---TAVAGKWLDAVLKEDVPRVLPNVLWWIH 185
+Q++ + + K D+ + TA A + + + + +L+ I
Sbjct: 111 KDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQ 170
Query: 186 EMRGHYFKLDYVKHLPLVAGAMIDSHVTA--EYWKNRTRERLRIKMPDTYVVHLGNSKEL 243
+ +++ L + + D Y + L
Sbjct: 171 DFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTL 230
Query: 244 MEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK 303
D K + +L SV R L + E+L++ +K
Sbjct: 231 KNYINDKRQKEKI--------------ILVYGRPSVKR-NAFTLIV----EALKIFVQKY 271
Query: 304 LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLV 361
+ +G + ++ + K A L + +
Sbjct: 272 DRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGI 319
Query: 362 QNSQAWGECFGRITIEAMAFQLPV 385
+ +E F L V
Sbjct: 320 SLMIS--PHPSYPPLEMAHFGLRV 341
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 396 | |||
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.97 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.97 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.94 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.93 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.9 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.89 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.88 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.86 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.85 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.84 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.82 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.82 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.73 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.67 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.66 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.6 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.56 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.51 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.5 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.47 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.46 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.45 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.39 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.36 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.27 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.18 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.09 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.01 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 98.99 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.9 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.82 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.75 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.57 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.56 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.51 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.46 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.35 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.13 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.84 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 97.54 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.51 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.43 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.47 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 95.29 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 94.06 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 93.67 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 93.63 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 93.5 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 87.71 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 87.42 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 87.32 | |
| 3nva_A | 535 | CTP synthase; rossman fold, nucleotide binding, LI | 87.16 | |
| 4gi5_A | 280 | Quinone reductase; protein structure initiative, F | 85.78 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 82.92 | |
| 2a5l_A | 200 | Trp repressor binding protein WRBA; APC5760, PA094 | 81.28 |
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=285.70 Aligned_cols=300 Identities=14% Similarity=0.044 Sum_probs=218.3
Q ss_pred cccEEEEEeccC---CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhh----------hhhhhhcceEEEEc
Q 016053 73 KSKLVLLVSHEL---SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL----------EHKMWDRGVQVISA 139 (396)
Q Consensus 73 ~~~kIl~v~~~~---~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 139 (396)
++||||++++.. ..||.++++.+++++|+++||+|+|+++..+.........+ .......|++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 357999999773 34999999999999999999999999965443211100000 00003346666554
Q ss_pred Cc----------------hhh----------hh-----hccCCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeec
Q 016053 140 KG----------------QET----------IN-----TALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEM 187 (396)
Q Consensus 140 ~~----------------~~~----------~~-----~~~~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~ 187 (396)
.. ... +. +..+||+||+|+.........+. ..+ .+++++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~v~~~h~~ 155 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK-----IPAVFTIHRL 155 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHC-----CCEEEEESCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccC-----CCEEEEeccc
Confidence 32 100 00 14599999999876544333332 234 4588899987
Q ss_pred ccccCc------------------hhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhh
Q 016053 188 RGHYFK------------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED 249 (396)
Q Consensus 188 ~~~~~~------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~ 249 (396)
....+. ......+..++.+++.|....+.. ...++.+..++.+||||+|.+.|.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~----~~~~~~~~~~i~vi~ngvd~~~~~~~~~ 231 (439)
T 3fro_A 156 NKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDE----WGFFRNFEGKITYVFNGIDCSFWNESYL 231 (439)
T ss_dssp CCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHT----HHHHGGGTTSEEECCCCCCTTTSCGGGS
T ss_pred ccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHH----hhhhhhcCCceeecCCCCCchhcCcccc
Confidence 422111 112233456788888888766652 2244567889999999999999876532
Q ss_pred hHHHHHhHHHHHHHcCCCCCCEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHH
Q 016053 250 NVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL 328 (396)
Q Consensus 250 ~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l 328 (396)
+......+..+++++|++++ ++|+++|++. +.||++.+++|++.+.+... .++++|+|+|+|+ ..+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~-----~~~~~l~i~G~g~---~~~~~~l 302 (439)
T 3fro_A 232 TGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE-----FQEMRFIIIGKGD---PELEGWA 302 (439)
T ss_dssp CSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG-----GGGEEEEEECCCC---HHHHHHH
T ss_pred cchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc-----CCCeEEEEEcCCC---hhHHHHH
Confidence 22234557889999999777 9999999999 99999999999999865210 1699999999986 2345899
Q ss_pred HHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 329 RNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 329 ~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++++ +.+.|.|+. +++.++|++||++|+||. .|+||++++||||||+|||+|+.||.+
T Consensus 303 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~ 366 (439)
T 3fro_A 303 RSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 366 (439)
T ss_dssp HHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHH
T ss_pred HHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcc
Confidence 99999988 788899954 789999999999999999 999999999999999999999998753
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=283.06 Aligned_cols=298 Identities=15% Similarity=0.141 Sum_probs=208.7
Q ss_pred cccccccEEEEEeccCC---------CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc
Q 016053 69 LSFMKSKLVLLVSHELS---------LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~---------~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (396)
....+|||||+++.... .||+++++.+++++|.++||+|++++......... . .....++.++..
T Consensus 15 ~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~--~~~~~~v~v~~~ 88 (438)
T 3c48_A 15 VPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE----I--VRVAENLRVINI 88 (438)
T ss_dssp ----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS----E--EEEETTEEEEEE
T ss_pred ccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc----c--ccccCCeEEEEe
Confidence 33455679999997542 38889999999999999999999999553310000 0 011235555433
Q ss_pred Cch-----------h-------h-----hhhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeeccccc---C
Q 016053 140 KGQ-----------E-------T-----INTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHY---F 192 (396)
Q Consensus 140 ~~~-----------~-------~-----~~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~---~ 192 (396)
... . . +....+||+||+|......... .....+ .+++++.|+..... +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~-----~p~v~~~h~~~~~~~~~~ 163 (438)
T 3c48_A 89 AAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWR-----IPLIHTAHTLAAVKNSYR 163 (438)
T ss_dssp CCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHT-----CCEEEECSSCHHHHSCC-
T ss_pred cCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcC-----CCEEEEecCCcccccccc
Confidence 210 0 0 1111259999999854433322 222334 34788888763111 0
Q ss_pred c------hh-----hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHH
Q 016053 193 K------LD-----YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVR 261 (396)
Q Consensus 193 ~------~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r 261 (396)
. .. ....++.++.+++.|....+.+.+ .+|++..++.+||||+|.+.|.+... ..+..+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~g~~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r 234 (438)
T 3c48_A 164 DDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH----HYDADPDRISVVSPGADVELYSPGND-----RATERSR 234 (438)
T ss_dssp ---CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH----HHCCCGGGEEECCCCCCTTTSCCC---------CHHHH
T ss_pred cccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH----HhCCChhheEEecCCccccccCCccc-----chhhhhH
Confidence 0 00 122345678888888777766543 56888888999999999988865421 1234588
Q ss_pred HHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 262 ESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 262 ~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
+++++++++++|+++|++.+.||++.+++|++.+.+..++ .+++|+|+|+.. .++.+.+.++++++++++.++|
T Consensus 235 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~-----~~~~l~i~G~~~-~~g~~~~~l~~~~~~~~l~~~v 308 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD-----RNLRVIICGGPS-GPNATPDTYRHMAEELGVEKRI 308 (438)
T ss_dssp HHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT-----CSEEEEEECCBC-------CHHHHHHHHTTCTTTE
T ss_pred HhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC-----cceEEEEEeCCC-CCCcHHHHHHHHHHHcCCCCcE
Confidence 9999988999999999999999999999999998763311 289999999821 0112678899999999999999
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+|+|++ +++.++|++||++|+||. .|+||++++|||+||+|||+++.||..
T Consensus 309 ~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~ 361 (438)
T 3c48_A 309 RFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLP 361 (438)
T ss_dssp EEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHH
T ss_pred EEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChh
Confidence 999998 789999999999999999 999999999999999999999998853
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=279.11 Aligned_cols=287 Identities=18% Similarity=0.177 Sum_probs=216.5
Q ss_pred cccccEEEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------
Q 016053 71 FMKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------ 142 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (396)
||++|||+++++... .||+++++.+++++| +||+|+|++....... ........++.++.....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 72 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEE------AHAYDKTLDYEVIRWPRSVMLPTP 72 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH------HHHHHTTCSSEEEEESSSSCCSCH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccc------hhhhccccceEEEEccccccccch
Confidence 567789999998654 589999999999999 6999999996654210 011123446666654431
Q ss_pred ------hhhhhccCCcEEEEcCchhhHHH-HHHHhcCCCccccceeeeeeecccccCc-----hhhhccccccccceeec
Q 016053 143 ------ETINTALKADLIVLNTAVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPLVAGAMIDS 210 (396)
Q Consensus 143 ------~~~~~~~~~DiV~~~~~~~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~s 210 (396)
..+.+..+||+||+|......++ ..+...+. ++++++.|+....+.. ......++.++.+++.|
T Consensus 73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 148 (394)
T 3okp_A 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGA----SKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYIS 148 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTC----SEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESC
T ss_pred hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCC----CcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcC
Confidence 23445689999999986443322 23344443 3478888865321111 11234456788888888
Q ss_pred cccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 211 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
....+.+.+ .++ ...++.+||||+|.+.|.+.. ...+..++++++++++.++|+++|++.+.||++.+++
T Consensus 149 ~~~~~~~~~----~~~-~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~ 218 (394)
T 3okp_A 149 QYTLRRFKS----AFG-SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIK 218 (394)
T ss_dssp HHHHHHHHH----HHC-SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHH
T ss_pred HHHHHHHHH----hcC-CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHH
Confidence 887776654 344 447899999999999886522 2335778999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~ 368 (396)
|++++.+. +++++|+|+|+|+ +.+.+++++ .++.++|+|+|++ +++.++|+.||++|+||. .
T Consensus 219 a~~~l~~~-------~~~~~l~i~G~g~-----~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~--~ 282 (394)
T 3okp_A 219 AMPQVIAA-------RPDAQLLIVGSGR-----YESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR--T 282 (394)
T ss_dssp HHHHHHHH-------STTCEEEEECCCT-----THHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC--C
T ss_pred HHHHHHhh-------CCCeEEEEEcCch-----HHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc--c
Confidence 99998763 3899999999986 778888888 5666899999998 899999999999999999 8
Q ss_pred -------CCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 369 -------ECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 369 -------E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|+||++++|||++|+|||+++.||...
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e 316 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPE 316 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGG
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHH
Confidence 999999999999999999999998754
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=282.32 Aligned_cols=294 Identities=15% Similarity=0.141 Sum_probs=207.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc---------
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------- 141 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 141 (396)
.|++|||+++++....||+++++.+++++|.+.||+|++++.............+...+ .+...+....
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 114 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNAL--QGNESLKLTEEMKELYLNV 114 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHH--TTCCSCCCCHHHHHHHHHH
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceee--cccccccccHHHHHHHHHH
Confidence 46778999999887779999999999999999999999998543311000000011111 1111111111
Q ss_pred ---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh---hhccccccccce-eeccccH
Q 016053 142 ---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD---YVKHLPLVAGAM-IDSHVTA 214 (396)
Q Consensus 142 ---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~---~~~~~~~~~~~~-~~s~~~~ 214 (396)
...+.+..+||+||+|++....+...+ ... .+++++.|+......... ..+.+...+.++ +.+....
T Consensus 115 ~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~-----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~ 188 (416)
T 2x6q_A 115 NRENSKFIDLSSFDYVLVHDPQPAALIEFY-EKK-----SPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQ 188 (416)
T ss_dssp HHHHHHSSCGGGSSEEEEESSTTGGGGGGS-CCC-----SCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSC
T ss_pred HHHHHHHHhhcCCCEEEEeccchhhHHHHH-Hhc-----CCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechHHHH
Confidence 011123468999999986554332211 111 568888887533221111 122334455544 4443322
Q ss_pred HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHH
Q 016053 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 215 ~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
+ +++..++.+||||+|...+.+.+. ....+.++|+++++++++++|+++|++.+.||++.+++|++.
T Consensus 189 ~----------~~~~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 189 P----------ELDRNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp T----------TSCTTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred h----------hCCccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 2 234477999999999876643211 122356789999998899999999999999999999999999
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC-----CHHHHHHHcCEEEecCCCCCC
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-----TVAPYLAAIDVLVQNSQAWGE 369 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~-----~~~~~~~~aDv~v~pS~~~~E 369 (396)
+.+. .|+++|+|+|+|+..++++.+.++++++++++.++|+|+|+.. ++.++|++||++|+||. .|
T Consensus 256 l~~~-------~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E 326 (416)
T 2x6q_A 256 VKEK-------IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--RE 326 (416)
T ss_dssp HHHH-------CTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SC
T ss_pred HHHh-------CCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cC
Confidence 8763 3799999999997554556788999999999999999999653 79999999999999999 99
Q ss_pred CccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 370 CFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 370 ~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+||++++||||||+|||+|+.||..
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~~ 351 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGIK 351 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHHH
T ss_pred CCccHHHHHHHcCCCEEEccCCCCh
Confidence 9999999999999999999998743
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=288.55 Aligned_cols=300 Identities=13% Similarity=0.101 Sum_probs=212.9
Q ss_pred ccEEEEEeccC-------------CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc-hhhhhhhhhhhhhcceEEEEc
Q 016053 74 SKLVLLVSHEL-------------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-DEVIYSLEHKMWDRGVQVISA 139 (396)
Q Consensus 74 ~~kIl~v~~~~-------------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 139 (396)
+|||+++++.. ..||+++++.+++++|.++||+|+|++....... ......+.......|++++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 37999999753 2488899999999999999999999995433211 000000110001346666543
Q ss_pred Cch---------------------hhhhhc--cCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccC---
Q 016053 140 KGQ---------------------ETINTA--LKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYF--- 192 (396)
Q Consensus 140 ~~~---------------------~~~~~~--~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~--- 192 (396)
... ..+.+. .+||+||+|....+..... +...+ .|++++.|+......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~-----~p~v~~~H~~~~~~~~~~ 161 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG-----LPFTFTGHSLGAQKMEKL 161 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHC-----CCEEEECSSCHHHHHHTT
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcC-----CcEEEEccCcccccchhh
Confidence 311 011122 4899999998654433222 22334 347888887531100
Q ss_pred ----------c------h---hhhccccccccceeeccccHHHHHHHHHhh--hc-c----cCCCEEEEecCCccchhhh
Q 016053 193 ----------K------L---DYVKHLPLVAGAMIDSHVTAEYWKNRTRER--LR-I----KMPDTYVVHLGNSKELMEV 246 (396)
Q Consensus 193 ----------~------~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~g-~----~~~k~~vI~ngid~~~~~~ 246 (396)
. . .....++.++.+++.|....+.+.+ . +| + +..++.|||||+|.+.|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~----~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~ 237 (499)
T 2r60_A 162 NVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYS----HDLYRGAVNVEDDDKFSVIPPGVNTRVFDG 237 (499)
T ss_dssp CCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTT----SGGGTTTCCTTCGGGEEECCCCBCTTTSSS
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh----hhcccccccccCCCCeEEECCCcChhhcCc
Confidence 0 0 0122345677888888776665443 4 56 5 6678999999999988865
Q ss_pred hhhhHHHHHhHHHHHHHcC-----CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-
Q 016053 247 AEDNVAKRVLREHVRESLG-----VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA- 320 (396)
Q Consensus 247 ~~~~~~~~~~~~~~r~~~g-----~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~- 320 (396)
... ...+..+|+++| ++++.++|+++|++.+.||++.+++|++.+.+..+ ...+|+|+|+....
T Consensus 238 ~~~----~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~------~~~~l~i~G~~~~~~ 307 (499)
T 2r60_A 238 EYG----DKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD------KANLVLTLRGIENPF 307 (499)
T ss_dssp CCC----HHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH------HCEEEEEESSCSBTT
T ss_pred cch----hhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC------CceEEEEECCCCCcc
Confidence 432 123466888888 77888999999999999999999999998875432 24689999983211
Q ss_pred ---------cchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHc----CEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 321 ---------QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 321 ---------~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~a----Dv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
+.+|.+++++++++++++++|+|+|++ +++.++|++| |++|+||. .|+||++++||||||+||
T Consensus 308 ~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~Pv 385 (499)
T 2r60_A 308 EDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPA 385 (499)
T ss_dssp TBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCE
T ss_pred cccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCE
Confidence 122388999999999999999999997 7899999999 99999999 999999999999999999
Q ss_pred EEcCCCCCC
Q 016053 386 LVLSELHPS 394 (396)
Q Consensus 386 I~t~~gG~~ 394 (396)
|+|+.||..
T Consensus 386 I~s~~~g~~ 394 (499)
T 2r60_A 386 VVTRNGGPA 394 (499)
T ss_dssp EEESSBHHH
T ss_pred EEecCCCHH
Confidence 999998753
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=267.48 Aligned_cols=281 Identities=16% Similarity=0.125 Sum_probs=202.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC---------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------------- 140 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 140 (396)
++..... ...||+++++.+++++|.++||+|++++...+.... ....++.+....
T Consensus 17 ~~~~~~~-p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (394)
T 2jjm_A 17 KIGITCY-PSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN---------KVYPNIYFHEVTVNQYSVFQYPPYDLA 86 (394)
T ss_dssp EEEEECC-C--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------------CCCTTEEEECCCCC----CCSCCHHHH
T ss_pred eeehhcC-CCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc---------ccCCceEEEecccccccccccccccHH
Confidence 4443332 345899999999999999999999999965432100 011122221111
Q ss_pred ---chhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc------Cchhhhccccccccceeecc
Q 016053 141 ---GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSH 211 (396)
Q Consensus 141 ---~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~ 211 (396)
....+.+..+||+||+|......+...+.+.... ...|++++.|+..... +.......++.++.+++.|.
T Consensus 87 ~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 87 LASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIG-ERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT-TCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCH
T ss_pred HHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhc-CCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCH
Confidence 0122334579999999976543322222211111 1256888899853111 11112334567888888888
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHH
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a 291 (396)
...+.+.+ .++. ..++.+||||+|.+.|.+.. +..++++++++++.++|+++|++.+.||++.+++|
T Consensus 166 ~~~~~~~~----~~~~-~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 166 SLINETHE----LVKP-NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp HHHHHHHH----HTCC-SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred HHHHHHHH----hhCC-cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 77766554 3343 56899999999998876532 34578889998888999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCc
Q 016053 292 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
++.+.+ + ++++|+|+|+|+ +.+++++++++++++++|+|+|+.+++.++|++||++|+||. .|+|
T Consensus 233 ~~~l~~-------~-~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~--~e~~ 297 (394)
T 2jjm_A 233 FAKIVT-------E-VDAKLLLVGDGP-----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSE--KESF 297 (394)
T ss_dssp HHHHHH-------S-SCCEEEEECCCT-----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCS--CCSC
T ss_pred HHHHHh-------h-CCCEEEEECCch-----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccc--cCCC
Confidence 999865 2 478999999986 678899999999999999999999999999999999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|++++|||+||+|||+|+.||..+
T Consensus 298 ~~~~~EAma~G~PvI~~~~~~~~e 321 (394)
T 2jjm_A 298 GLVLLEAMACGVPCIGTRVGGIPE 321 (394)
T ss_dssp CHHHHHHHHTTCCEEEECCTTSTT
T ss_pred chHHHHHHhcCCCEEEecCCChHH
Confidence 999999999999999999999765
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-34 Score=278.21 Aligned_cols=299 Identities=16% Similarity=0.113 Sum_probs=208.0
Q ss_pred cEEEEEeccC----CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--hh----------hhh--hhhcceEE
Q 016053 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--SL----------EHK--MWDRGVQV 136 (396)
Q Consensus 75 ~kIl~v~~~~----~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--~~----------~~~--~~~~~~~~ 136 (396)
|||+++++.. ..||+++++.+++++|.++||+|+|++...+........ .+ ... ....|+++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 5899999864 248889999999999999999999999643210000000 00 000 01246666
Q ss_pred EEcCch--------------------------------hhhh----hccCCcEEEEcCchhhHHHHHHHhcCCCccccce
Q 016053 137 ISAKGQ--------------------------------ETIN----TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180 (396)
Q Consensus 137 ~~~~~~--------------------------------~~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~v 180 (396)
+..... ..+. +..+||+||+|+...+.....+.... ....|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~--~~~~p~ 158 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAE--TPEIPS 158 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSS--SCCCCE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcc--cCCCCE
Confidence 543110 0111 24689999999855443333333210 112568
Q ss_pred eeeeeecccc-cC----------ch---------------hhhccccccccceeeccccHHHHHHHHHhhhc--------
Q 016053 181 LWWIHEMRGH-YF----------KL---------------DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR-------- 226 (396)
Q Consensus 181 v~~~h~~~~~-~~----------~~---------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g-------- 226 (396)
++++|+.... .. .. .....+..++.+++.|....+.+.+. .+|
T Consensus 159 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~g~~~~~~~~ 235 (485)
T 1rzu_A 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGLEGVIG 235 (485)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTCHHHHH
T ss_pred EEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhcc---ccCcchHHHHH
Confidence 8899985311 00 00 01122356778888887776665432 123
Q ss_pred ccCCCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCCC-CEEEEEEecccCCCCHHHHHHHHHH
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRNE-DLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~~-~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
.+..++.+||||+|.+.|.+..+. ..+...+..+|+++|++++ +++|+++||+.+.||++.+++|++.
T Consensus 236 ~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (485)
T 1rzu_A 236 SRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDE 315 (485)
T ss_dssp TTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHH
T ss_pred hhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHH
Confidence 356789999999999888654321 1122346778999999875 6799999999999999999999999
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE-EecCcC-CHHHHHHHcCEEEecCCCCCCCcc
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTL-TVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~~~-~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
+.+ ++++|+|+|+|+ ..+.+.+++++++++ ++|+ |.|..+ ++.++|++||++|+||. .|+||
T Consensus 316 l~~---------~~~~l~ivG~g~---~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~ 379 (485)
T 1rzu_A 316 IVS---------LGGRLVVLGAGD---VALEGALLAAASRHH--GRVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCG 379 (485)
T ss_dssp HHH---------TTCEEEEEECBC---HHHHHHHHHHHHHTT--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSC
T ss_pred HHh---------cCceEEEEeCCc---hHHHHHHHHHHHhCC--CcEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCC
Confidence 865 589999999985 236788999999876 6887 788874 45899999999999999 99999
Q ss_pred HHHHHHHhcCCCEEEcCCCCCC
Q 016053 373 RITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 373 ~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++||||||+|||+|+.||.+
T Consensus 380 ~~~lEAma~G~PvI~s~~gg~~ 401 (485)
T 1rzu_A 380 LTQLYALRYGCIPVVARTGGLA 401 (485)
T ss_dssp SHHHHHHHHTCEEEEESSHHHH
T ss_pred HHHHHHHHCCCCEEEeCCCChh
Confidence 9999999999999999998753
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=269.69 Aligned_cols=282 Identities=16% Similarity=0.132 Sum_probs=203.7
Q ss_pred cEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc------------
Q 016053 75 KLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG------------ 141 (396)
Q Consensus 75 ~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 141 (396)
|||+++++. ...||+++++.+++++|+++||+|++++...... .. .++++.....
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-------~~-----~~~~v~~~~~~~~~~~~~~~~~ 68 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-------CP-----KAFELIQVPVKSHTNHGRNAEY 68 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-------CC-----TTCEEEECCCCCSSHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-------CC-----CCcEEEEEccCcccchhhHHHH
Confidence 589999876 4458889999999999999999999999542211 10 1444433321
Q ss_pred ---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch-hhh-----ccc--cccccceeec
Q 016053 142 ---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL-DYV-----KHL--PLVAGAMIDS 210 (396)
Q Consensus 142 ---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~-~~~-----~~~--~~~~~~~~~s 210 (396)
...+.+..+||+||+|....+.... ..... ...+.+++.|......... ... ..+ ..++.+++.|
T Consensus 69 ~~~l~~~i~~~~~Dvv~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 144 (374)
T 2iw1_A 69 YAWVQNHLKEHPADRVVGFNKMPGLDVY--FAADV--CYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLT 144 (374)
T ss_dssp HHHHHHHHHHSCCSEEEESSCCTTCSEE--ECCSC--CHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESC
T ss_pred HHHHHHHHhccCCCEEEEecCCCCceee--ecccc--ccceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcC
Confidence 1223345799999999754322100 00000 0112233333321111110 011 111 2467777777
Q ss_pred cccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 211 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
....+.+.+ .+|++..++.+||||+|.+.|.+.... ..+.++++++|+++++++|+++|++.+.||++.+++
T Consensus 145 ~~~~~~~~~----~~~~~~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~ 216 (374)
T 2iw1_A 145 DKQIADFQK----HYQTEPERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIE 216 (374)
T ss_dssp HHHHHHHHH----HHCCCGGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHH
T ss_pred HHHHHHHHH----HhCCChhheEEecCCcCHHhcCcccch----hHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHH
Confidence 776665543 568888889999999999988654321 225678999999989999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
|++.+.+.. .++++|+|+|+|. .+.++++++++++.++|+|+|+.+++.++|++||++|+||. .|+
T Consensus 217 a~~~l~~~~------~~~~~l~i~G~g~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~--~e~ 282 (374)
T 2iw1_A 217 ALASLPESL------RHNTLLFVVGQDK------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEA 282 (374)
T ss_dssp HHHTSCHHH------HHTEEEEEESSSC------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCS
T ss_pred HHHHhHhcc------CCceEEEEEcCCC------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccc--cCC
Confidence 999875531 1589999999974 26788899999999999999999999999999999999999 999
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++|||+||+|||+|+.||..
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~ 306 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYA 306 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTT
T ss_pred cccHHHHHHHCCCCEEEecCCCch
Confidence 999999999999999999999875
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=273.13 Aligned_cols=298 Identities=14% Similarity=0.106 Sum_probs=206.7
Q ss_pred cEEEEEeccC----CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--------hhh--hhh---hhcceEEE
Q 016053 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--------SLE--HKM---WDRGVQVI 137 (396)
Q Consensus 75 ~kIl~v~~~~----~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--------~~~--~~~---~~~~~~~~ 137 (396)
|||+++++.. ..||+++++.+|+++|.++||+|+|++...+........ .+. ..+ ...|+.++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 5899999764 358889999999999999999999999643210000000 000 000 12456654
Q ss_pred EcCch--------------------------------hhhhh----ccCCcEEEEcCchhhHHHHHHHhcCCCcccccee
Q 016053 138 SAKGQ--------------------------------ETINT----ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVL 181 (396)
Q Consensus 138 ~~~~~--------------------------------~~~~~----~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv 181 (396)
..... ..+.+ ..+||+||+|+...+.....+.... ...|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~---~~~p~v 157 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG---RPAKSV 157 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---CSSEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhcc---CCCCEE
Confidence 32110 01112 2689999999865444333222111 125688
Q ss_pred eeeeecccc-cCc-------------------------hhhhccccccccceeeccccHHHHHHHHHhhhcc--------
Q 016053 182 WWIHEMRGH-YFK-------------------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI-------- 227 (396)
Q Consensus 182 ~~~h~~~~~-~~~-------------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~-------- 227 (396)
+++|+.... ... ......+..++.+++.|....+.+.+. .+|.
T Consensus 158 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~~~~~~~~~~~ 234 (485)
T 2qzs_A 158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP---QFAYGMEGLLQQ 234 (485)
T ss_dssp EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH---HHHTTCHHHHHH
T ss_pred EEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc---ccCcchHHHHHh
Confidence 999986311 000 001122356777888887766655432 1342
Q ss_pred cC--CCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHH
Q 016053 228 KM--PDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSF 292 (396)
Q Consensus 228 ~~--~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~ 292 (396)
+. .++.+||||+|.+.|.+..+. ......+..+|+++|+++ +.++|+++||+.+.||++.+++|+
T Consensus 235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 314 (485)
T 2qzs_A 235 RHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL 314 (485)
T ss_dssp HHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH
T ss_pred hccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH
Confidence 22 679999999999888654311 112234677899999976 779999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE-EecCcC-CHHHHHHHcCEEEecCCCCCCC
Q 016053 293 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTL-TVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~~~-~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
+.+.+ ++++|+|+|+|+ ..+.+.+++++++++ ++|+ |.|..+ ++..+|++||++|+||. .|+
T Consensus 315 ~~l~~---------~~~~l~ivG~g~---~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~ 378 (485)
T 2qzs_A 315 PGLLE---------QGGQLALLGAGD---PVLQEGFLAAAAEYP--GQVGVQIGYHEAFSHRIMGGADVILVPSR--FEP 378 (485)
T ss_dssp HHHHH---------TTCEEEEEEEEC---HHHHHHHHHHHHHST--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCS
T ss_pred HHHhh---------CCcEEEEEeCCc---hHHHHHHHHHHHhCC--CcEEEeCCCCHHHHHHHHHhCCEEEECCc--cCC
Confidence 99865 589999999985 236788999999886 6786 888874 45899999999999999 999
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++||||||+|||+|+.||..
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~ 402 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLA 402 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHH
T ss_pred CcHHHHHHHHCCCCEEECCCCCcc
Confidence 999999999999999999998753
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=269.44 Aligned_cols=289 Identities=13% Similarity=0.105 Sum_probs=206.5
Q ss_pred cEEEEEeccCCC-CChHHHHHHHHHHHHhCCCEEEEEeccCCCCch-hhhh--hhhhhhhhcceEEEEcC--chhhhhhc
Q 016053 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQKPSEED-EVIY--SLEHKMWDRGVQVISAK--GQETINTA 148 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (396)
|||+++++..+. ||+++++.+|+++|.++ |+|++++........ .... ................. ........
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 79 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDV 79 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHHHh
Confidence 589999876554 88889999999999999 999999844321100 0000 00000000000000000 11233355
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccc--cceeeccccHHHHHHHHHhhhc
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVA--GAMIDSHVTAEYWKNRTRERLR 226 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~g 226 (396)
.+||+||+|..............++|.. .+++...|...... .......+...+ .+++.|....+.+.+ +|
T Consensus 80 ~~~Div~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ii~~S~~~~~~~~~-----~~ 152 (413)
T 3oy2_A 80 HKPDIVMIYNDPIVIGNYLLAMGKCSHR-TKIVLYVDLVSKNI-RENLWWIFSHPKVVGVMAMSKCWISDICN-----YG 152 (413)
T ss_dssp HCCSEEEEEECHHHHHHHHHHGGGCCSC-CEEEEEECCCSBSC-CGGGGGGGGCTTEEEEEESSTHHHHHHHH-----TT
T ss_pred cCCCEEEEcchHHHHHHHHHHhccCCCC-Cceeeeccccchhh-HHHHHHHHhccCCceEEEcCHHHHHHHHH-----cC
Confidence 7999999996544433333334445543 34455555443222 222345566755 889999888777653 56
Q ss_pred ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhcc
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKL 304 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~ 304 (396)
. ..++.+||||+|.+.|. ..++++++++ +.++|+++|++.+.||++.+++|++++.+.
T Consensus 153 ~-~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~------ 212 (413)
T 3oy2_A 153 C-KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK------ 212 (413)
T ss_dssp C-CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH------
T ss_pred C-CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh------
Confidence 5 57899999999998772 2467788877 899999999999999999999999998763
Q ss_pred CCCCEEEEEEecCCCcc-chHHHHHHHHHHhcCCCCc-------EEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 305 EVPSVHAVIIGSDMNAQ-TKFESELRNYVMQKKIQDR-------VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 305 ~~~~~~l~ivG~g~~~~-~~~~~~l~~~~~~~~l~~~-------V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
+++++|+|+|+|+..+ ....+.+++++++++++++ |.|.|++ +++.++|++||++|+||. .|+||++
T Consensus 213 -~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~ 289 (413)
T 3oy2_A 213 -YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLC 289 (413)
T ss_dssp -CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHH
T ss_pred -CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcH
Confidence 3899999999987432 2245889999999999987 8888986 589999999999999999 9999999
Q ss_pred HHHHHhcCCCEEEcCCCCCC
Q 016053 375 TIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 375 ~lEAma~G~PVI~t~~gG~~ 394 (396)
++|||+||+|||+|+.||.+
T Consensus 290 ~lEAma~G~PvI~s~~~g~~ 309 (413)
T 3oy2_A 290 SAEGAVLGKPLIISAVGGAD 309 (413)
T ss_dssp HHHHHTTTCCEEEECCHHHH
T ss_pred HHHHHHcCCCEEEcCCCChH
Confidence 99999999999999998853
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-32 Score=265.75 Aligned_cols=303 Identities=19% Similarity=0.161 Sum_probs=202.8
Q ss_pred ccEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhh------hhh--------hhhhcceE
Q 016053 74 SKLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS------LEH--------KMWDRGVQ 135 (396)
Q Consensus 74 ~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~------~~~--------~~~~~~~~ 135 (396)
.|||||++++..+ ||-..++..|.++|+++||+|.|+++..+......... +.. .....|++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 88 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVD 88 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCce
Confidence 4699999987443 77789999999999999999999996543211100000 000 01112333
Q ss_pred EEEcCch----------------------------h--hh-------h-------------hccCCcEEEEcCchhhHHH
Q 016053 136 VISAKGQ----------------------------E--TI-------N-------------TALKADLIVLNTAVAGKWL 165 (396)
Q Consensus 136 ~~~~~~~----------------------------~--~~-------~-------------~~~~~DiV~~~~~~~~~~~ 165 (396)
++.+... + .+ . ....+||+|+|+...+...
T Consensus 89 ~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l~~ 168 (536)
T 3vue_A 89 RVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLA 168 (536)
T ss_dssp EEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGSTHH
T ss_pred EEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHHHH
Confidence 3211000 0 00 0 0124578889987655443
Q ss_pred HHHHhcCC---Cccccceeeeeeeccc--cc---------Cchh----------------------hhccccccccceee
Q 016053 166 DAVLKEDV---PRVLPNVLWWIHEMRG--HY---------FKLD----------------------YVKHLPLVAGAMID 209 (396)
Q Consensus 166 ~~~~~~~~---~~~~~~vv~~~h~~~~--~~---------~~~~----------------------~~~~~~~~~~~~~~ 209 (396)
..++.... .....++++++|+... .+ .... .+..+..+|.++++
T Consensus 169 ~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~tV 248 (536)
T 3vue_A 169 SYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTV 248 (536)
T ss_dssp HHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEEES
T ss_pred HHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEEEc
Confidence 33332211 1123679999997531 10 0000 01112356778888
Q ss_pred ccccHHHHHHHHHhhhc------ccCCCEEEEecCCccchhhhhhh------------hHHHHHhHHHHHHHcCCC--CC
Q 016053 210 SHVTAEYWKNRTRERLR------IKMPDTYVVHLGNSKELMEVAED------------NVAKRVLREHVRESLGVR--NE 269 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g------~~~~k~~vI~ngid~~~~~~~~~------------~~~~~~~~~~~r~~~g~~--~~ 269 (396)
|...++.+.+.. .+| ....++.+|+||||.+.|.|..+ ...+...+..+++.+|++ ++
T Consensus 249 S~~~a~ei~~~~--~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 249 SPYYAEELISGI--ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp CHHHHHHHHTTC--CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred CHHHhhhhhccc--ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 877766554321 111 23568999999999999877532 123445677888999885 56
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 347 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~-- 347 (396)
.++|+++||+.++||++.+++|++++.+ .+.+|+++|.|. ..+...++....+++ +++.+.+..
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~---------~~~~l~l~G~G~---~~~~~~~~~~~~~~~--~~v~~~~~~~~ 392 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQ---------EDVQIVLLGTGK---KKFEKLLKSMEEKYP--GKVRAVVKFNA 392 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTT---------SSCEEEEECCBC---HHHHHHHHHHHHHST--TTEEEECSCCH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHh---------hCCeEEEEeccC---chHHHHHHHHHhhcC--CceEEEEeccH
Confidence 7999999999999999999999998754 578999999885 335556666666554 679888875
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+++..+|+.||++|+||. .|+||++++|||+||+|||+|++||.+
T Consensus 393 ~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp HHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred HHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCch
Confidence 568899999999999999 999999999999999999999999854
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=257.68 Aligned_cols=250 Identities=16% Similarity=0.055 Sum_probs=188.8
Q ss_pred ccccEEEEEecc--------C------CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE
Q 016053 72 MKSKLVLLVSHE--------L------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (396)
Q Consensus 72 m~~~kIl~v~~~--------~------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (396)
|++|||+++++. . ..||+++++.+++++|.++||+|++++....... ..++.++
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~------------~~~~~~~ 68 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG------------RPGLTVV 68 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC------------STTEEEC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC------------CCcceec
Confidence 567899999987 1 3488899999999999999999999996543211 1234443
Q ss_pred EcCc---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccH
Q 016053 138 SAKG---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTA 214 (396)
Q Consensus 138 ~~~~---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 214 (396)
.... ...+.+..+||+||+|........ +. ....+ +++.|+..... ...+.+++.|....
T Consensus 69 ~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~-----~~~~p-v~~~h~~~~~~---------~~~d~ii~~S~~~~ 131 (342)
T 2iuy_A 69 PAGEPEEIERWLRTADVDVVHDHSGGVIGPA--GL-----PPGTA-FISSHHFTTRP---------VNPVGCTYSSRAQR 131 (342)
T ss_dssp SCCSHHHHHHHHHHCCCSEEEECSSSSSCST--TC-----CTTCE-EEEEECSSSBC---------SCCTTEEESCHHHH
T ss_pred cCCcHHHHHHHHHhcCCCEEEECCchhhHHH--Hh-----hcCCC-EEEecCCCCCc---------ccceEEEEcCHHHH
Confidence 3322 234445679999999996544321 11 11256 88899874221 12778888887766
Q ss_pred HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHH
Q 016053 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 215 ~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
+.+.+ ..++.+||||+|.+.|.+... . .+++..|+++|++.+.||++.+++|++.
T Consensus 132 ~~~~~---------~~~~~vi~ngvd~~~~~~~~~---------------~-~~~~~~i~~vG~~~~~Kg~~~li~a~~~ 186 (342)
T 2iuy_A 132 AHCGG---------GDDAPVIPIPVDPARYRSAAD---------------Q-VAKEDFLLFMGRVSPHKGALEAAAFAHA 186 (342)
T ss_dssp HHTTC---------CTTSCBCCCCBCGGGSCCSTT---------------C-CCCCSCEEEESCCCGGGTHHHHHHHHHH
T ss_pred HHHhc---------CCceEEEcCCCChhhcCcccc---------------c-CCCCCEEEEEeccccccCHHHHHHHHHh
Confidence 65432 467999999999988765321 1 1345689999999999999999999987
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC--CHHHHHHHcCEEEecCC-------
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQ------- 365 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~--~~~~~~~~aDv~v~pS~------- 365 (396)
+ +++|+|+|+|+ +.+.+++++++++ ++|+|+|+++ ++.++|++||++|+||.
T Consensus 187 ~------------~~~l~i~G~g~-----~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~ 247 (342)
T 2iuy_A 187 C------------GRRLVLAGPAW-----EPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWG 247 (342)
T ss_dssp H------------TCCEEEESCCC-----CHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTC
T ss_pred c------------CcEEEEEeCcc-----cHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccc
Confidence 4 68999999986 6788888888887 7999999984 67999999999999998
Q ss_pred -CCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 366 -AWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 366 -~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.|.|+||++++|||+||+|||+|+.||.+
T Consensus 248 ~~~~E~~~~~~~EAma~G~PvI~s~~~~~~ 277 (342)
T 2iuy_A 248 GIWCEPGATVVSEAAVSGTPVVGTGNGCLA 277 (342)
T ss_dssp SCCCCCCCHHHHHHHHTTCCEEECCTTTHH
T ss_pred cccccCccHHHHHHHhcCCCEEEcCCCChH
Confidence 13799999999999999999999998854
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=250.03 Aligned_cols=283 Identities=16% Similarity=0.096 Sum_probs=192.8
Q ss_pred cccccEEEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhh-hh--hhh-cceEEEEc-----
Q 016053 71 FMKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLE-HK--MWD-RGVQVISA----- 139 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~----- 139 (396)
+.++|||+++++... .||+++++.+++++|.+.||+|++++............... .. +.. .....+..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATH 96 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHH
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHH
Confidence 334579999997643 38888999999999999999999999554321000000000 00 000 00000111
Q ss_pred CchhhhhhccCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccCc-hh----hhccccccccceeecccc
Q 016053 140 KGQETINTALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYFK-LD----YVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 140 ~~~~~~~~~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~~-~~----~~~~~~~~~~~~~~s~~~ 213 (396)
.....+.+..+||+||+|......+... ....+ .++++++|+....... .. ....++.++.+++.|...
T Consensus 97 ~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 171 (406)
T 2gek_A 97 RKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE-----GPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLA 171 (406)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE-----SSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHH
T ss_pred HHHHHHHHhcCCCEEEECCccchHHHHHHHHhcC-----CCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 1122334457999999998654333222 22233 4588888885322100 00 113446788888888777
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc-cCCCCHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLFLHSF 292 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l-~~~Kg~~~li~a~ 292 (396)
.+.+.+ .+ +.+++ +||||+|.+.|.+... ..+++++++.|+++|++ .+.||++.+++|+
T Consensus 172 ~~~~~~----~~--~~~~~-vi~~~v~~~~~~~~~~-------------~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 172 RRWQME----AL--GSDAV-EIPNGVDVASFADAPL-------------LDGYPREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp HHHHHH----HH--SSCEE-ECCCCBCHHHHHTCCC-------------CTTCSCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred HHHHHH----hc--CCCcE-EecCCCChhhcCCCch-------------hhhccCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 766554 23 34568 9999999887754321 12233456899999999 9999999999999
Q ss_pred HHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCC
Q 016053 293 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
+.+.+ ++++++|+|+|++. . +.++++++++ .++|+|+|++ +++.++|+.||++|+||. |.|+
T Consensus 232 ~~l~~-------~~~~~~l~i~G~~~-----~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~ 295 (406)
T 2gek_A 232 PKLVA-------RFPDVEILIVGRGD-----E-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHL-GGES 295 (406)
T ss_dssp HHHHT-------TSTTCEEEEESCSC-----H-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCC-SCCS
T ss_pred HHHHH-------HCCCeEEEEEcCCc-----H-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCC-CCCC
Confidence 98865 44899999999986 5 7888888876 6899999998 567999999999999984 2899
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++|||+||+|||+++.||.+
T Consensus 296 ~~~~~~Ea~a~G~PvI~~~~~~~~ 319 (406)
T 2gek_A 296 FGIVLVEAMAAGTAVVASDLDAFR 319 (406)
T ss_dssp SCHHHHHHHHHTCEEEECCCHHHH
T ss_pred CchHHHHHHHcCCCEEEecCCcHH
Confidence 999999999999999999998753
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=265.33 Aligned_cols=307 Identities=14% Similarity=0.148 Sum_probs=202.1
Q ss_pred ccEEEEEeccCC-----------CCChHHHHH--------HHHHHHHhCCCEEE----EEeccCCCCchh-hhhhhhhhh
Q 016053 74 SKLVLLVSHELS-----------LSGGPLLLM--------ELAFLLRGVGTKVN----WITIQKPSEEDE-VIYSLEHKM 129 (396)
Q Consensus 74 ~~kIl~v~~~~~-----------~gG~~~~~~--------~l~~~L~~~G~~V~----vi~~~~~~~~~~-~~~~~~~~~ 129 (396)
.++|++++.-.. .||...++. +|++.|.++||+|+ |+|...+..... .....+...
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~ 357 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVY 357 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECT
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeec
Confidence 368999985432 255568887 47777788999886 888443322111 111111111
Q ss_pred hhcceEEEEcCchh---------------------------hhhh--ccCCcEEEEcCchhhHHHHH-HHhcCCCccccc
Q 016053 130 WDRGVQVISAKGQE---------------------------TINT--ALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPN 179 (396)
Q Consensus 130 ~~~~~~~~~~~~~~---------------------------~~~~--~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~ 179 (396)
...|+.++..+... .+.. ..+||+||+|...++..... +...++ |
T Consensus 358 ~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gv-----P 432 (816)
T 3s28_A 358 DSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGV-----T 432 (816)
T ss_dssp TCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTC-----C
T ss_pred CcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCC-----C
Confidence 12366665443211 0111 24799999998665543332 333454 4
Q ss_pred eeeeeeecccccCc--h--------hh---------hccccccccceeeccccHHHHHHH---HHhhh------------
Q 016053 180 VLWWIHEMRGHYFK--L--------DY---------VKHLPLVAGAMIDSHVTAEYWKNR---TRERL------------ 225 (396)
Q Consensus 180 vv~~~h~~~~~~~~--~--------~~---------~~~~~~~~~~~~~s~~~~~~~~~~---~~~~~------------ 225 (396)
++++.|........ . .+ ...+..++.+++.|....+.+.+. .....
T Consensus 433 ~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~ 512 (816)
T 3s28_A 433 QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVH 512 (816)
T ss_dssp EEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEE
T ss_pred EEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhccc
Confidence 78888875311110 0 00 013457788888887665532111 10000
Q ss_pred --cccCCCEEEEecCCccchhhhhhhhHH------HHH-----hHHHHHHHcCC--CCCCEEEEEEecccCCCCHHHHHH
Q 016053 226 --RIKMPDTYVVHLGNSKELMEVAEDNVA------KRV-----LREHVRESLGV--RNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 226 --g~~~~k~~vI~ngid~~~~~~~~~~~~------~~~-----~~~~~r~~~g~--~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
+...+++.|||||+|.+.|.+...... ... +..+.++.+|+ ++++++|+++||+.+.||++.+++
T Consensus 513 gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIe 592 (816)
T 3s28_A 513 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVE 592 (816)
T ss_dssp SCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHH
T ss_pred ccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHH
Confidence 122348999999999998876532110 000 01123456676 678899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCC------ccchHHHHHHHHHHhcCCCCcEEEecCc------CCHHHHHH-Hc
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMN------AQTKFESELRNYVMQKKIQDRVHFVNKT------LTVAPYLA-AI 357 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~------~~~~~~~~l~~~~~~~~l~~~V~~~g~~------~~~~~~~~-~a 357 (396)
|++++.+.. ++++|+|+|+|.+ .+.++.+.++++++++++.++|.|+|++ +++..+|+ ++
T Consensus 593 A~~~L~~~~-------~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aa 665 (816)
T 3s28_A 593 WYGKNTRLR-------ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK 665 (816)
T ss_dssp HHHHCHHHH-------HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhC-------CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcC
Confidence 999986532 6899999999872 1123678899999999999999999965 45788888 67
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++|+||. .|+||++++||||||+|||+|+.||..
T Consensus 666 DvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~ 700 (816)
T 3s28_A 666 GAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPA 700 (816)
T ss_dssp CEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHH
T ss_pred eEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChH
Confidence 99999999 999999999999999999999999864
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=232.91 Aligned_cols=274 Identities=12% Similarity=0.127 Sum_probs=177.8
Q ss_pred cccEEEEEeccCCCC---ChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh----hhh-hc--ceEEEEcCc-
Q 016053 73 KSKLVLLVSHELSLS---GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH----KMW-DR--GVQVISAKG- 141 (396)
Q Consensus 73 ~~~kIl~v~~~~~~g---G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~----~~~-~~--~~~~~~~~~- 141 (396)
++|||+++++.+.++ |+.+.+.+++++|.++||+|+|++...... ......+.. .+. .. ...+.....
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKDLQSFKSFKYVMPEEDKDFALQIVPFNDR 123 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHHHGGGTTSEECCTTCCCCCSEEEEECSCC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHHHHhhhccceeeccCCccccceeeecccc
Confidence 446999999887764 777789999999999999999999653221 111000100 000 00 012222211
Q ss_pred hhhhhhccCCcEEEEcCchhhHHHHHHH-----hcCCCccccceeeeeeecccccCchhhh-----ccccccc--cceee
Q 016053 142 QETINTALKADLIVLNTAVAGKWLDAVL-----KEDVPRVLPNVLWWIHEMRGHYFKLDYV-----KHLPLVA--GAMID 209 (396)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~-----~~~~~~~~~~vv~~~h~~~~~~~~~~~~-----~~~~~~~--~~~~~ 209 (396)
........++|+||++..........+. ..+.+ ..+.++.+|++...++..... ..+...+ .++++
T Consensus 124 ~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 201 (413)
T 2x0d_A 124 YNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIP--PNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFN 201 (413)
T ss_dssp TTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCC--CCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEE
T ss_pred ccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccc--cCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEc
Confidence 1111123579999999865444333221 01111 134566666654333221111 1222222 35566
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc-cCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l-~~~Kg~~~l 288 (396)
|....+.+.+ .|++..++.++|||+|.+.|.+. ..+ .+++..|+++||+ .+.||++.+
T Consensus 202 S~~~~~~l~~-----~g~~~~~~~~i~~g~d~~~~~~~---------------~~~-~~~~~~il~~gr~~~~~Kg~~~l 260 (413)
T 2x0d_A 202 SELLKQYFNN-----KGYNFTDEYFFQPKINTTLKNYI---------------NDK-RQKEKIILVYGRPSVKRNAFTLI 260 (413)
T ss_dssp SHHHHHHHHH-----HTCCCSEEEEECCCCCHHHHTTT---------------TSC-CCCCSEEEEEECTTCGGGCHHHH
T ss_pred CHHHHHHHHH-----cCCCCCceEEeCCCcCchhhccc---------------ccc-cCCCCEEEEEecCchhccCHHHH
Confidence 6666655543 35555678999999998765321 111 2455678889996 688999999
Q ss_pred HHHHHHHHHHHHhhccCCC---CEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 289 LHSFYESLELIKEKKLEVP---SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~---~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
++|++.+.+.. | +++|+++|++... .++++.++|+|+|.+ +++.++|++||++|+|
T Consensus 261 i~A~~~l~~~~-------~~~~~~~l~ivG~~~~~------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~p 321 (413)
T 2x0d_A 261 VEALKIFVQKY-------DRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISL 321 (413)
T ss_dssp HHHHHHHHHHC-------TTGGGCEEEEEESCCCC------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECC
T ss_pred HHHHHHHHHhC-------CCCCceEEEEEcCCchh------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEe
Confidence 99999986532 4 4899999998621 346677899999986 7899999999999999
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|. .|+||++++||||||+|||+++.|
T Consensus 322 S~--~E~~g~~~lEAmA~G~PVV~~~~g 347 (413)
T 2x0d_A 322 MI--SPHPSYPPLEMAHFGLRVITNKYE 347 (413)
T ss_dssp CS--SSSCCSHHHHHHHTTCEEEEECBT
T ss_pred cC--CCCCCcHHHHHHhCCCcEEEeCCC
Confidence 99 999999999999999999996543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-27 Score=235.50 Aligned_cols=272 Identities=11% Similarity=0.026 Sum_probs=186.2
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHH--HHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc-----hh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-----QE 143 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~--L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 143 (396)
..++|||+++++....+|+++++.++++. +.+.||+|++++...... .. +...+...+ .+..... ..
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~-~~----~~~~~~~~~-~~~~~~~~~~~~l~ 275 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDG-ST----LRTRLAQAS-TLHDVTALGHLATA 275 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCS-CH----HHHHHHHTS-EEEECTTCCHHHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCc-cH----HHHHHHhcC-eEEECCCCCHHHHH
Confidence 34567999999988888899999999999 788999999998543211 11 122223333 3333321 23
Q ss_pred hhhhccCCcEEEEcCchh-hHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHH
Q 016053 144 TINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.+.+..+||+||.+.... ...+....... .+++.+.|...... ... ...+...+.+++.|.....
T Consensus 276 ~~i~~~~~Div~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~-~~~~~~~d~~i~~s~~~~~------- 341 (568)
T 2vsy_A 276 KHIRHHGIDLLFDLRGWGGGGRPEVFALRP-----APVQVNWLAYPGTS-GAP-WMDYVLGDAFALPPALEPF------- 341 (568)
T ss_dssp HHHHHTTCSEEEECSSCTTCSSCHHHHTCC-----SSEEEEESSSSSCC-CCT-TCCEEEECTTTSCTTTGGG-------
T ss_pred HHHHhCCCCEEEECCCCCCcchHHHHhcCC-----CceeEeeecCCccc-CCC-CceEEEECCCcCCcccccC-------
Confidence 344568999999865322 11111111222 23444444331111 101 1111235666666654322
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
++ +++.+|||.++.....+.. .+...|+++|++++.+ ++++|++.+ ||++.+++++.++.+.
T Consensus 342 --~~---~~i~~ipn~~~~~~~~~~~-------~~~~~r~~~~~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~~~---- 403 (568)
T 2vsy_A 342 --YS---EHVLRLQGAFQPSDTSRVV-------AEPPSRTQCGLPEQGV-VLCCFNNSY-KLNPQSMARMLAVLRE---- 403 (568)
T ss_dssp --CS---SEEEECSSCSCCCCTTCCC-------CCCCCTGGGTCCTTSC-EEEECCCGG-GCCHHHHHHHHHHHHH----
T ss_pred --Cc---ceeEcCCCcCCCCCCCCCC-------CCCCCccccCCCCCCE-EEEeCCccc-cCCHHHHHHHHHHHHh----
Confidence 22 6799999965433211100 0123577889876665 558999999 9999999999998653
Q ss_pred ccCCCCEEEEEEe-cCCCccchHHHHHHHHHHhcCCC-CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 303 KLEVPSVHAVIIG-SDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 303 ~~~~~~~~l~ivG-~g~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
.|+++|+|+| +|+ ..+.+++.++++|+. ++|+|+|++ +++.++|+.||++|+||. . +||++++||
T Consensus 404 ---~~~~~l~i~G~~g~-----~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEA 472 (568)
T 2vsy_A 404 ---VPDSVLWLLSGPGE-----ADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDA 472 (568)
T ss_dssp ---CTTCEEEEECCSTT-----HHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHH
T ss_pred ---CCCcEEEEecCCHH-----HHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHH
Confidence 3899999999 765 789999999999998 999999998 489999999999999999 8 999999999
Q ss_pred HhcCCCEEE-------cCCC
Q 016053 379 MAFQLPVLV-------LSEL 391 (396)
Q Consensus 379 ma~G~PVI~-------t~~g 391 (396)
|+||+|||+ |++|
T Consensus 473 ma~G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 473 LWTGCPVLTTPGETFAARVA 492 (568)
T ss_dssp HHTTCCEEBCCCSSGGGSHH
T ss_pred HhCCCCEEeccCCCchHHHH
Confidence 999999999 9998
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-26 Score=212.83 Aligned_cols=252 Identities=15% Similarity=0.068 Sum_probs=174.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 142 (396)
|||++++. ..||.+.....++++|.++||+|++++..... ....+...|+++......
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--------EADLVPKHGIEIDFIRISGLRGKGIKALIA 76 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--------HHHHGGGGTCEEEECCCCCCTTCCHHHHHT
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCCcc--------hhhhccccCCceEEecCCccCcCccHHHHH
Confidence 79999973 34788899999999999999999999965431 111222335555433211
Q ss_pred ------------hhhhhccCCcEEEEcCchhhHH-HHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 143 ------------ETINTALKADLIVLNTAVAGKW-LDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 143 ------------~~~~~~~~~DiV~~~~~~~~~~-~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
..+.+..+||+||++....... ...+...++| ++.+.|+... ........+..+.+++.
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-----~v~~~~~~~~---~~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 77 APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-----VVLHEQNGIA---GLTNKWLAKIATKVMQA 148 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-----EEEEECSSSC---CHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-----EEEEecCCCC---cHHHHHHHHhCCEEEec
Confidence 1222346999999998653322 2233344544 5666665321 11112223345555554
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCE-EEEEEecccCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~-~il~vG~l~~~Kg~~~l 288 (396)
+... ++ ++.+++||+|.+.+.+.. .+++++++++++ ++++.|++.+.||.+.+
T Consensus 149 ~~~~-------------~~--~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~~~~l 202 (364)
T 1f0k_A 149 FPGA-------------FP--NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARILNQTM 202 (364)
T ss_dssp STTS-------------SS--SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHHHHHH
T ss_pred Chhh-------------cC--CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHHHHHH
Confidence 4321 12 578999999987664321 245667766665 45556799999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~ 367 (396)
++|++.+. .+++ ++++|++. .+++++.+++++++ +|+|+|+++++.++|++||++|+||.
T Consensus 203 i~a~~~l~----------~~~~~l~i~G~~~------~~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~sg-- 263 (364)
T 1f0k_A 203 PQVAAKLG----------DSVTIWHQSGKGS------QQSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRSG-- 263 (364)
T ss_dssp HHHHHHHG----------GGEEEEEECCTTC------HHHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECCC--
T ss_pred HHHHHHhc----------CCcEEEEEcCCch------HHHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECCc--
Confidence 99999873 2678 56788874 36788888888874 79999999999999999999999983
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
|++++|||+||+|||+++.+|.
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCT
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCC
Confidence 8999999999999999999975
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-26 Score=216.16 Aligned_cols=258 Identities=12% Similarity=0.111 Sum_probs=167.7
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--------hhhhhhhhcceEEEEcCc--
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--------SLEHKMWDRGVQVISAKG-- 141 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-- 141 (396)
+.|||+++++. +.. |.......+++.|.++| +|+|++..... ...... .........|+.++....
T Consensus 13 ~~MkIl~is~~~~p~-~~~~~~~~l~~~l~~~G-~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~ 89 (406)
T 2hy7_A 13 RRPCYLVLSSHDFRT-PRRANIHFITDQLALRG-TTRFFSLRYSR-LSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTV 89 (406)
T ss_dssp CCSCEEEEESSCTTS-SSCCHHHHHHHHHHHHS-CEEEEECSCBT-THHHHTCTTGGGGGGTTSEEEETTEEEEECCBSS
T ss_pred CCceEEEEecccCCC-hhhhhHhHHHHHHHhCC-ceEEEEecccH-HHHhhccchhhhhccCccceecCCeEEEeecccc
Confidence 34689999986 443 22234455777888999 99999632110 000000 000001124566543211
Q ss_pred --------h-h----------------hhhh-ccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccc-c-c--
Q 016053 142 --------Q-E----------------TINT-ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-H-Y-- 191 (396)
Q Consensus 142 --------~-~----------------~~~~-~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~-~-~-- 191 (396)
. + .+.+ ..++|+||.+......+...+...+.| ++.+.|+... . .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~~~~~~~~~~~~p-----~v~~~h~~~~~~~~~~ 164 (406)
T 2hy7_A 90 HPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPA-----AKLVYRASDGLSTINV 164 (406)
T ss_dssp CCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGGGGHHHHHHHCTT-----SEEEEEESSCHHHHTC
T ss_pred CCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHHHHHHHHHHhCCC-----EEEEEeccchhhcccc
Confidence 0 0 0000 137999996655444422333444543 6667776421 1 0
Q ss_pred ---CchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC
Q 016053 192 ---FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 268 (396)
Q Consensus 192 ---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~ 268 (396)
........++.++.+++.|....+.+.+ .+ ++.+||||+|.+.|.+.... . .+
T Consensus 165 ~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~-----~~----~i~vipngvd~~~f~~~~~~--------------~-~~ 220 (406)
T 2hy7_A 165 ASYIEREFDRVAPTLDVIALVSPAMAAEVVS-----RD----NVFHVGHGVDHNLDQLGDPS--------------P-YA 220 (406)
T ss_dssp CHHHHHHHHHHGGGCSEEEESCGGGGGGCSC-----ST----TEEECCCCBCTTHHHHHCSC--------------S-CC
T ss_pred cHHHHHHHHHHHHhCCEEEEcCHHHHHHHHh-----cC----CEEEEcCCcChHhcCccccc--------------c-cC
Confidence 1111234456788899998887765432 22 79999999999888543210 1 12
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc-
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 347 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~- 347 (396)
+.++|+|+|++.+.||+ ++++ .+ +.++++|+|+|+|+ ++++++.++|+|+|++
T Consensus 221 ~~~~i~~vGrl~~~Kg~---~~~l---~~-------~~~~~~l~ivG~g~-------------~~~~~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 221 EGIHAVAVGSMLFDPEF---FVVA---SK-------AFPQVTFHVIGSGM-------------GRHPGYGDNVIVYGEMK 274 (406)
T ss_dssp SSEEEEEECCTTBCHHH---HHHH---HH-------HCTTEEEEEESCSS-------------CCCTTCCTTEEEECCCC
T ss_pred CCcEEEEEeccccccCH---HHHH---HH-------hCCCeEEEEEeCch-------------HHhcCCCCCEEEcCCCC
Confidence 34899999999999999 3333 22 23899999999873 6677888999999997
Q ss_pred -CCHHHHHHHcCEEEecCCCCCCCccHHHHHHH-------hcCCCEEEcCC
Q 016053 348 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAM-------AFQLPVLVLSE 390 (396)
Q Consensus 348 -~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm-------a~G~PVI~t~~ 390 (396)
+++.++|++||++|+||. .|+||++++||| |||+|||+|+.
T Consensus 275 ~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~ 323 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA 323 (406)
T ss_dssp HHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG
T ss_pred HHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh
Confidence 689999999999999999 999999999999 99999999974
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-23 Score=198.66 Aligned_cols=156 Identities=10% Similarity=0.030 Sum_probs=116.4
Q ss_pred CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 230 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
.++.+||||||.+.|.+.......+. +..+|++++ ++++|+++||+.+.||++.+++|++++.+..++. ..++
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~---~~~v 291 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH---HGKI 291 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG---TTTE
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccc---cCcE
Confidence 56899999999998865321111111 456888886 5789999999999999999999999987754331 1258
Q ss_pred EEEEEecCCCccch----HHHHHHHHHHhcC----CC--CcEEEe-cCc--CCHHHHHHHcCEEEecCCCCCCCccHHHH
Q 016053 310 HAVIIGSDMNAQTK----FESELRNYVMQKK----IQ--DRVHFV-NKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI 376 (396)
Q Consensus 310 ~l~ivG~g~~~~~~----~~~~l~~~~~~~~----l~--~~V~~~-g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~l 376 (396)
+|+++|....++.+ +++++++++.+++ .. ..|+|+ |.+ +++..+|++||++|+||. .||||++++
T Consensus 292 ~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~l 369 (482)
T 1uqt_A 292 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAK 369 (482)
T ss_dssp EEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHH
T ss_pred EEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHH
Confidence 89999974322222 3455566655432 11 136654 654 789999999999999999 999999999
Q ss_pred HHHhcCC-----CEEEcCCCCCC
Q 016053 377 EAMAFQL-----PVLVLSELHPS 394 (396)
Q Consensus 377 EAma~G~-----PVI~t~~gG~~ 394 (396)
||||||+ |||+|+.+|.+
T Consensus 370 EAmA~g~~~~~gpvV~S~~~G~~ 392 (482)
T 1uqt_A 370 EYVAAQDPANPGVLVLSQFAGAA 392 (482)
T ss_dssp HHHHHSCTTSCCEEEEETTBGGG
T ss_pred HHHHhCCCCCCCCEEEECCCCCH
Confidence 9999997 89999988764
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=195.88 Aligned_cols=279 Identities=13% Similarity=0.129 Sum_probs=168.0
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-C-CEEEEEeccCCCCchhhhhhhhhhhhhcceEE-E--Ec--C
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-I--SA--K 140 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~--~ 140 (396)
|..|+++|||++++...+.. .....+++.|+++ | ++|.+++...... . ........++.. + .. .
T Consensus 2 ~~~m~~~mkIl~v~~~~~~~---~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~ 72 (375)
T 3beo_A 2 PVDMTERLKVMTIFGTRPEA---IKMAPLVLELQKHPEKIESIVTVTAQHRQ--M----LDQVLSIFGITPDFDLNIMKD 72 (375)
T ss_dssp CCCCSSCEEEEEEECSHHHH---HHHHHHHHHHTTCTTTEEEEEEECCSSSH--H----HHHHHHHHTCCCSEECCCCCT
T ss_pred CCCCCcCceEEEEecCcHHH---HHHHHHHHHHHhCCCCCCeEEEEcCCCHH--H----HHHHHHHcCCCCccccccCCC
Confidence 33455668999998543222 2456778888876 4 8887776433221 0 001111112211 1 11 0
Q ss_pred --c-----------hhhhhhccCCcEEEEcCch-hhHHH-HHHHhcCCCccccceeeeeeeccccc----Cchhhh-ccc
Q 016053 141 --G-----------QETINTALKADLIVLNTAV-AGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYV-KHL 200 (396)
Q Consensus 141 --~-----------~~~~~~~~~~DiV~~~~~~-~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~-~~~ 200 (396)
. ...+.+..+||+||+|+.. ..... ..+...++| ++++.|...... +..... +.+
T Consensus 73 ~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-----~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T 3beo_A 73 RQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-----VGHVEAGLRTWDKYSPYPEEMNRQLT 147 (375)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-----EEEESCCCCCSCTTSSTTHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-----EEEEecccccccccCCChhHhhhhHH
Confidence 0 1233345799999998753 22221 223344544 555555432111 011111 112
Q ss_pred -cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecC-CccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEec
Q 016053 201 -PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 278 (396)
Q Consensus 201 -~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ng-id~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~ 278 (396)
+..+.+++.|....+.+. .+|++++++.+|+|| +|...+.+... .+.++++++ ++++++++++||
T Consensus 148 ~~~~d~ii~~s~~~~~~~~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~------~~~~~~~~~--~~~~~vl~~~gr 214 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQ-----KENKDESRIFITGNTAIDALKTTVKET------YSHPVLEKL--GNNRLVLMTAHR 214 (375)
T ss_dssp HHHCSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHCCSS------CCCHHHHTT--TTSEEEEEECCC
T ss_pred hhhhheeeCCCHHHHHHHH-----HcCCCcccEEEECChhHhhhhhhhhhh------hhHHHHHhc--cCCCeEEEEecc
Confidence 236777777777666544 357777789999999 78766543210 012345544 356677889999
Q ss_pred ccCC-CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHH
Q 016053 279 VSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 355 (396)
Q Consensus 279 l~~~-Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~ 355 (396)
+.+. ||++.+++|++++.+. +|++++++ |.++. ..+.+.+++++ +..++|+|+|.. .++.++|+
T Consensus 215 ~~~~~K~~~~li~a~~~l~~~-------~~~~~~i~-~~g~~--~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~ 281 (375)
T 3beo_A 215 RENLGEPMRNMFRAIKRLVDK-------HEDVQVVY-PVHMN--PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAA 281 (375)
T ss_dssp GGGTTHHHHHHHHHHHHHHHH-------CTTEEEEE-ECCSC--HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhh-------CCCeEEEE-eCCCC--HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHH
Confidence 9875 9999999999988652 37888655 65541 12334444442 333689998865 48999999
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC-CCC
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE-LHP 393 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~-gG~ 393 (396)
+||++|+|| |.+++|||+||+|||+++. ||.
T Consensus 282 ~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~ 313 (375)
T 3beo_A 282 RSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTER 313 (375)
T ss_dssp TCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSC
T ss_pred hCcEEEECC-------CChHHHHHhcCCCEEEecCCCCC
Confidence 999999988 5679999999999999964 764
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=195.63 Aligned_cols=235 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecc--------ccc--Cc------hh--------------hhc
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR--------GHY--FK------LD--------------YVK 198 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~--------~~~--~~------~~--------------~~~ 198 (396)
..||++|+|....+.....++... + ..+.++++|... +.. +. .. .+.
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~-~--~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRR-I--DVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTT-C--SCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhC-C--CCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 458999999988777656555432 2 267999999862 211 00 00 011
Q ss_pred cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhH-HHHHhHHHHHHH--------cCCCCC
Q 016053 199 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV-AKRVLREHVRES--------LGVRNE 269 (396)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~-~~~~~~~~~r~~--------~g~~~~ 269 (396)
....++.++++|..+++.+.. .++.+.+. +||||||.+.|.+..... .+...|.++.+. ++++.+
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~----Ll~r~~d~--iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEH----LLKRKPDG--ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHH----HTSSCCSE--ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHhCCEEEECCHHHHHHHHH----HhcCCCCE--EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 124788888888888876554 33444443 399999999987742211 122334444332 245534
Q ss_pred -CEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc-------------------------
Q 016053 270 -DLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT------------------------- 322 (396)
Q Consensus 270 -~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~------------------------- 322 (396)
.++|..+||+. .+||+|.+++|+.++...++..+.+.+-+.|+|+..+..+-+
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 410 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG 410 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence 45565689999 689999999999999877765332334577888776532210
Q ss_pred -----------------------------------------------------------hHHHHHHHHHHhcCCCCc---
Q 016053 323 -----------------------------------------------------------KFESELRNYVMQKKIQDR--- 340 (396)
Q Consensus 323 -----------------------------------------------------------~~~~~l~~~~~~~~l~~~--- 340 (396)
+..+.+.+.++++++.++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d 490 (725)
T 3nb0_A 411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD 490 (725)
T ss_dssp HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence 011233444566676665
Q ss_pred ---EEEecC-c--------CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 341 ---VHFVNK-T--------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 341 ---V~~~g~-~--------~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|+|++. . .++.++|+.||++|+||. +|+||++++||||||+|||+|+.||..
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~ 554 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFG 554 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHH
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChh
Confidence 677763 2 368999999999999999 999999999999999999999999853
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=188.74 Aligned_cols=278 Identities=12% Similarity=0.072 Sum_probs=170.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhhhhhhhhhhhhcceEE-EEcC------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAK------------ 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------ 140 (396)
|||++++... ........++++|+++| +++.++....... . ........++.. +...
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHRE--M----LDQVLKLFSIVPDYDLNIMQPGQGLTEIT 71 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGG--G----GHHHHHHHTCCCSEECCCCSTTSCHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHH--H----HHHHHHHcCCCCCcceecCCCCccHHHHH
Confidence 5899987432 11245678999999999 4888765432211 0 011111112211 1111
Q ss_pred -----chhhhhhccCCcEEEEcCc-hhhHHH-HHHHhcCCCccccceeeeeeeccccc----Cchhhhc-c-ccccccce
Q 016053 141 -----GQETINTALKADLIVLNTA-VAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYVK-H-LPLVAGAM 207 (396)
Q Consensus 141 -----~~~~~~~~~~~DiV~~~~~-~~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~~-~-~~~~~~~~ 207 (396)
....+.+..+||+||+|+. ...... ..+...++ |++++.|+..... +.....+ + .+..+.++
T Consensus 72 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~i-----p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 146 (384)
T 1vgv_A 72 CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRI-----PVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHF 146 (384)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTC-----CEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCC-----CEEEEecccccccccCCCchHhhHHHHHhhccEEE
Confidence 1123334579999999975 322221 22333443 4666666542111 1111111 2 23477777
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcC-CCC-CCEEEEEEecccCC-C
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLG-VRN-EDLLFAIINSVSRG-K 283 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g-~~~-~~~~il~vG~l~~~-K 283 (396)
+.|....+.+. .+|++.+++.+++||+ |...+.+... ......+.++++++| +++ ++++++++||+.+. |
T Consensus 147 ~~s~~~~~~l~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k 220 (384)
T 1vgv_A 147 SPTETSRQNLL-----RENVADSRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (384)
T ss_dssp ESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH
T ss_pred cCcHHHHHHHH-----HcCCChhhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeCCccccch
Confidence 77776665543 4577778899999995 4332221100 000011245788888 744 45678899999876 9
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEE
Q 016053 284 GQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVL 360 (396)
Q Consensus 284 g~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~ 360 (396)
|++.+++|++++.+. .++++|+++ |+++ .+.+.+++.+.. .++|+|+|.. +++.++|++||++
T Consensus 221 g~~~li~a~~~l~~~-------~~~~~l~i~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~ 286 (384)
T 1vgv_A 221 GFEEICHALADIATT-------HQDIQIVYPVHLNP----NVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLI 286 (384)
T ss_dssp HHHHHHHHHHHHHHH-------CTTEEEEEECCBCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHhh-------CCCeEEEEEcCCCH----HHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEE
Confidence 999999999988653 378999886 4331 245666666432 3689997654 7899999999999
Q ss_pred EecCCCCCCCccHHHHHHHhcCCCEEEcCC-CCC
Q 016053 361 VQNSQAWGECFGRITIEAMAFQLPVLVLSE-LHP 393 (396)
Q Consensus 361 v~pS~~~~E~fg~~~lEAma~G~PVI~t~~-gG~ 393 (396)
|+||- .+++|||+||+|||+++. ||.
T Consensus 287 v~~Sg-------~~~lEA~a~G~PvI~~~~~~~~ 313 (384)
T 1vgv_A 287 LTDSG-------GIQEEAPSLGKPVLVMRDTTER 313 (384)
T ss_dssp EESSS-------TGGGTGGGGTCCEEEESSCCSC
T ss_pred EECCc-------chHHHHHHcCCCEEEccCCCCc
Confidence 99983 348999999999999987 664
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=175.22 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=116.7
Q ss_pred EecCCccchhh--hhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc-CCCCHHHHHHHHHHHH--HHHHhhccCCCCE
Q 016053 235 VHLGNSKELME--VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESL--ELIKEKKLEVPSV 309 (396)
Q Consensus 235 I~ngid~~~~~--~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~-~~Kg~~~li~a~~~l~--~~~~~~~~~~~~~ 309 (396)
||||+|.+.|. +... ...+.+..+|+++|+++ +++|+++|++. +.||++.++++++.+. + +++++
T Consensus 2 ipngvd~~~f~~~~~~~--~~~~~~~~~r~~~~~~~-~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~-------~~~~~ 71 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTG--SRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-------EFQEM 71 (200)
T ss_dssp ---CCCTTTSSGGGSCS--CHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-------GGGGE
T ss_pred CCCccChhhcccccccc--chhhHHHHHHHHcCCCC-CCEEEEeeccccccCCHHHHHHHHHHHHhhc-------cCCCe
Confidence 79999999987 5421 11223567899999964 45999999999 9999999999999874 3 23799
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEE-ecCcC--CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF-VNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~~~--~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
+|+|+|.+. +++.+.+++++++++ +|+| +|+++ ++..+|+.||++|+||. .|+||++++|||+||+|||
T Consensus 72 ~l~i~G~~~---~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 72 RFIIIGKGD---PELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp EEEEECCBC---HHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEE
T ss_pred EEEEECCCC---hHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEE
Confidence 999999874 236788899999886 8999 99985 89999999999999999 9999999999999999999
Q ss_pred EcCCCCC
Q 016053 387 VLSELHP 393 (396)
Q Consensus 387 ~t~~gG~ 393 (396)
+++.+|.
T Consensus 144 ~~~~~~~ 150 (200)
T 2bfw_A 144 ASAVGGL 150 (200)
T ss_dssp EESCHHH
T ss_pred EeCCCCh
Confidence 9998864
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=183.72 Aligned_cols=226 Identities=11% Similarity=0.038 Sum_probs=152.4
Q ss_pred CCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-----Cc----hhhhccccccccceeeccccHHHHHHH
Q 016053 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-----FK----LDYVKHLPLVAGAMIDSHVTAEYWKNR 220 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-----~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~ 220 (396)
.-|+|++|+.........+.+. .|. .++.++.|...... ++ ....+.+..+|.+...+......+.+.
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~-~~~--~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~ 225 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQ-RPD--APILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES 225 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHH-CTT--SCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhh-CCC--CeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence 4689999997655544444443 333 46888888753111 11 112233345666666665555554444
Q ss_pred HHhhh-cccC-------------CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 221 TRERL-RIKM-------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 221 ~~~~~-g~~~-------------~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
..... |.+. .++.++|+|||.+.|.+... ..+.++|++++ ++.+|+++||+.+.||++
T Consensus 226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~-----~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP-----QLPEGIEEWAD---GHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----C-----CCCTTHHHHHT---TSEEEEEEEESSGGGCHH
T ss_pred HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhH-----HHHHHHHHHhC---CceEEEEcccCccccCHH
Confidence 44333 3221 26789999999999875432 11256788886 578999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc----hHHHHHHHHHHhcC----CCCcEEEecCc--CCHHHHHHH
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT----KFESELRNYVMQKK----IQDRVHFVNKT--LTVAPYLAA 356 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~----~~~~~l~~~~~~~~----l~~~V~~~g~~--~~~~~~~~~ 356 (396)
.+++|+ ++.+..++. .++.|+++|....++. ++++++++++.+.+ .. .|+|+|.. +++..+|++
T Consensus 298 ~lL~Af-~ll~~~P~~----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~aly~~ 371 (496)
T 3t5t_A 298 RAVRAF-VLAARGGGL----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIACFRR 371 (496)
T ss_dssp HHHHHH-HHHHHTSSC----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHHHHH
T ss_pred HHHHHH-HHHHhCccc----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHHHHh
Confidence 999999 877643221 1467888885432222 23445555555442 22 69999975 789999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcC---CCEEEcCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQ---LPVLVLSELHPS 394 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G---~PVI~t~~gG~~ 394 (396)
||++|+||. .||||++++|||||| .|+|.|+.+|++
T Consensus 372 ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~ 410 (496)
T 3t5t_A 372 ADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAA 410 (496)
T ss_dssp CSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTH
T ss_pred ccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCH
Confidence 999999999 999999999999997 899999998864
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=176.47 Aligned_cols=255 Identities=9% Similarity=0.036 Sum_probs=163.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceE--E-EEcCc---hhhhhhcc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--V-ISAKG---QETINTAL 149 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~---~~~~~~~~ 149 (396)
+|.+.+ .+ .|..+.+..|+++|.++| +|.+.+...... . ...... .++. . ++... .+.+.+..
T Consensus 42 ~iwih~--~s-~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~--~----~~~~~~-~~v~~~~~~p~~~~~~l~~~l~~~ 110 (374)
T 2xci_A 42 ALWVHT--AS-IGEFNTFLPILKELKREH-RILLTYFSPRAR--E----YLKTKS-DFYDCLHPLPLDNPFSVKRFEELS 110 (374)
T ss_dssp CEEEEC--SS-HHHHHHHHHHHHHHHHHS-CEEEEESCGGGH--H----HHHTTG-GGCSEEEECCCSSHHHHHHHHHHH
T ss_pred CEEEEc--CC-HHHHHHHHHHHHHHHhcC-CEEEEEcCCcHH--H----HHHHhc-ccccceeECCCCCHHHHHHHHHHh
Confidence 455444 22 466789999999999998 887665432110 0 011111 1222 2 22221 23455668
Q ss_pred CCcEEEEcCc--hhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcc
Q 016053 150 KADLIVLNTA--VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI 227 (396)
Q Consensus 150 ~~DiV~~~~~--~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~ 227 (396)
+||+||++.. ++. .+..+ . . | ++...+.... ...+...++.++.+++.|....+.+. .+|+
T Consensus 111 ~pDiv~~~~~~~~~~-~~~~~-~-~-p-----~~~~~~~~~~---~~~~~~~~~~~d~ii~~S~~~~~~l~-----~~g~ 173 (374)
T 2xci_A 111 KPKALIVVEREFWPS-LIIFT-K-V-P-----KILVNAYAKG---SLIEKILSKKFDLIIMRTQEDVEKFK-----TFGA 173 (374)
T ss_dssp CCSEEEEESCCCCHH-HHHHC-C-S-C-----EEEEEECCCC---CHHHHHHHTTCSEEEESCHHHHHHHH-----TTTC
T ss_pred CCCEEEEECccCcHH-HHHHH-h-C-C-----EEEEEeecCc---hHHHHHHHHhCCEEEECCHHHHHHHH-----HcCC
Confidence 8999997642 222 11111 1 1 2 3332222111 11233445678888888888776654 3466
Q ss_pred cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCC
Q 016053 228 KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 307 (396)
Q Consensus 228 ~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~ 307 (396)
+ ++.+++|+. |.....+ ++. + +.+++++.|+ ..||++.+++|++++.+ ++|
T Consensus 174 ~--ki~vi~n~~----f~~~~~~----------~~~--l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~-------~~p 224 (374)
T 2xci_A 174 K--RVFSCGNLK----FICQKGK----------GIK--L--KGEFIVAGSI--HTGEVEIILKAFKEIKK-------TYS 224 (374)
T ss_dssp C--SEEECCCGG----GCCCCCS----------CCC--C--SSCEEEEEEE--CGGGHHHHHHHHHHHHT-------TCT
T ss_pred C--eEEEcCCCc----cCCCcCh----------hhh--h--cCCEEEEEeC--CCchHHHHHHHHHHHHh-------hCC
Confidence 5 799999973 2111100 001 1 1245666665 46899999999998864 458
Q ss_pred CEEEEEEecCCCccchHHHHHHHHHHhcCCC--------CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHH
Q 016053 308 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--------DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 379 (396)
Q Consensus 308 ~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~--------~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm 379 (396)
+++|+|+|+|+ +..++++++++++++. ++|.+.|..+|+..+|+.||++++||.. .|++|++++|||
T Consensus 225 ~~~lvivG~g~----~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~~~lEAm 299 (374)
T 2xci_A 225 SLKLILVPRHI----ENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGHNLLEPT 299 (374)
T ss_dssp TCEEEEEESSG----GGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCCCCHHHH
T ss_pred CcEEEEECCCH----HHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCcCHHHHH
Confidence 99999999875 2235788999998886 5788889889999999999998888762 578899999999
Q ss_pred hcCCCEEEc-CCCC
Q 016053 380 AFQLPVLVL-SELH 392 (396)
Q Consensus 380 a~G~PVI~t-~~gG 392 (396)
|||+|||++ +.+|
T Consensus 300 A~G~PVI~~~~~~~ 313 (374)
T 2xci_A 300 CWGIPVIYGPYTHK 313 (374)
T ss_dssp TTTCCEEECSCCTT
T ss_pred HhCCCEEECCCccC
Confidence 999999975 6665
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-21 Score=179.89 Aligned_cols=268 Identities=15% Similarity=0.094 Sum_probs=159.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEE-EEcC------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAK------------ 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------ 140 (396)
|||++++...+.. .....++++|++. ||+|.+++...... . ....+...++.. +...
T Consensus 6 mkIl~v~~~~~~~---~~~~~l~~~L~~~~g~~v~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (376)
T 1v4v_A 6 KRVVLAFGTRPEA---TKMAPVYLALRGIPGLKPLVLLTGQHRE--Q----LRQALSLFGIQEDRNLDVMQERQALPDLA 76 (376)
T ss_dssp EEEEEEECSHHHH---HHHHHHHHHHHTSTTEEEEEEECSSCHH--H----HHHHHHTTTCCCSEECCCCSSCCCHHHHH
T ss_pred eEEEEEEeccHHH---HHHHHHHHHHHhCCCCceEEEEcCCcHH--H----HHHHHHHcCCCcccccccCCCCccHHHHH
Confidence 6999998543212 2356789999998 89988776432210 0 111111222221 1111
Q ss_pred -----chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeecccccC-c---h-hhhcc-ccccccce
Q 016053 141 -----GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGHYF-K---L-DYVKH-LPLVAGAM 207 (396)
Q Consensus 141 -----~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~~~-~---~-~~~~~-~~~~~~~~ 207 (396)
....+.+..+||+||+|+.....+ ...+...++| +++..+....... . . ...++ ....+.++
T Consensus 77 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (376)
T 1v4v_A 77 ARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-----VGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDF 151 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-----EEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-----EEEEeCCCccccccCCCchHHHHHHHHHHhceee
Confidence 112333467999999987532222 2233444544 4433332211110 0 1 11111 22355666
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
+.+....+.+. ..|++++++.+++|+. |...+... +.++++++ +++.++++++||+...||++
T Consensus 152 ~~s~~~~~~l~-----~~g~~~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~--~~~~~vl~~~gr~~~~k~~~ 215 (376)
T 1v4v_A 152 APTPLAKANLL-----KEGKREEGILVTGQTGVDAVLLAAK---------LGRLPEGL--PEGPYVTVTMHRRENWPLLS 215 (376)
T ss_dssp ESSHHHHHHHH-----TTTCCGGGEEECCCHHHHHHHHHHH---------HCCCCTTC--CSSCEEEECCCCGGGGGGHH
T ss_pred CCCHHHHHHHH-----HcCCCcceEEEECCchHHHHhhhhh---------hhHHHHhc--CCCCEEEEEeCcccchHHHH
Confidence 66666555443 3477778899999875 32222110 11123333 24567788899998888999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
.+++|++++.+. +++++++++ |++. ..++.+++++.. .++|+|+|.. .++.++|++||++|.|
T Consensus 216 ~ll~a~~~l~~~-------~~~~~lv~~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~ 281 (376)
T 1v4v_A 216 DLAQALKRVAEA-------FPHLTFVYPVHLNP----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTD 281 (376)
T ss_dssp HHHHHHHHHHHH-------CTTSEEEEECCSCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHHHhh-------CCCeEEEEECCCCH----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEEC
Confidence 999999988652 378898886 6542 245667666542 3689999543 3899999999999998
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcC-CCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLS-ELHP 393 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~-~gG~ 393 (396)
|- |+ ++|||+||+|||+++ .+|.
T Consensus 282 S~------g~-~lEA~a~G~PvI~~~~~~~~ 305 (376)
T 1v4v_A 282 SG------GL-QEEGAALGVPVVVLRNVTER 305 (376)
T ss_dssp CH------HH-HHHHHHTTCCEEECSSSCSC
T ss_pred Cc------CH-HHHHHHcCCCEEeccCCCcc
Confidence 72 44 889999999999974 5653
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=159.16 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=99.8
Q ss_pred cCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHH--hcCCCCcE
Q 016053 264 LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM--QKKIQDRV 341 (396)
Q Consensus 264 ~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~--~~~l~~~V 341 (396)
+.+++++++|+|+|++.+.||++.+++|++.+ ++++|+|+|++. ..+.+++.++ +++++++|
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l-----------~~~~l~i~G~~~-----~~~~l~~~~~~~~~~l~~~v 80 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFS-----KGDHAERYARKIMKIAPDNV 80 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCC-----TTSTHHHHHHHHHHHSCTTE
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC-----------CCcEEEEEecCc-----cHHHHHHHHHhhhcccCCcE
Confidence 44567888999999999999999999999875 589999999986 3456777777 77888999
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+|+|++ +++.++|+.||++|+||. .|+||++++|||+||+|||+++.||.
T Consensus 81 ~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~ 132 (177)
T 2f9f_A 81 KFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGF 132 (177)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHH
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCH
Confidence 999998 459999999999999999 99999999999999999999998764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=155.59 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=95.2
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 347 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~-- 347 (396)
+++|+|+|++.+.||++.+++|+..+. +.++++|+|+|+|+ ..+.++++++++++ +|+| |++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~--~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK--------YKQDIVLLLKGKGP-----DEKKIKLLAQKLGV--KAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT--------TGGGEEEEEECCST-----THHHHHHHHHHHTC--EEEC-CCCCH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc--------cCCCeEEEEEeCCc-----cHHHHHHHHHHcCC--eEEE-eecCH
Confidence 578999999999999999999999863 22799999999986 67889999999887 7899 986
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCC-CEEEc-CCCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLVL-SELHPS 394 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~-PVI~t-~~gG~~ 394 (396)
+++.++|+.||++|+||. .|+||++++|||+||+ |||++ +.||..
T Consensus 66 ~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~ 112 (166)
T 3qhp_A 66 NELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATR 112 (166)
T ss_dssp HHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGG
T ss_pred HHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchh
Confidence 789999999999999999 9999999999999997 99995 456543
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=150.65 Aligned_cols=283 Identities=12% Similarity=0.116 Sum_probs=162.2
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceE-EEEcC------
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-VISAK------ 140 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 140 (396)
...|+||||+++...-+ + -..+..++++|++. |+++.++....... . ..+.+...++. .+.+.
T Consensus 20 ~~~~~m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~---~---~~~~~~~~~i~~~~~l~~~~~~~ 90 (396)
T 3dzc_A 20 FQSNAMKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCVTGQHRE---M---LDQVLELFSITPDFDLNIMEPGQ 90 (396)
T ss_dssp ----CCEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEECCSSSH---H---HHHHHHHTTCCCSEECCCCCTTC
T ss_pred HHhCCCCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEEecccHH---H---HHHHHHhcCCCCceeeecCCCCC
Confidence 34566789999984322 2 24568889999986 79987665433211 0 11111222321 01111
Q ss_pred -----------chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeeccccc----Cchhhhccc--c
Q 016053 141 -----------GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYVKHL--P 201 (396)
Q Consensus 141 -----------~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~~~~--~ 201 (396)
....+....+||+|++++.....+ ...+...++| ++...+....+. ++....+.+ +
T Consensus 91 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-----v~h~~ag~rs~~~~~~~~~~~~r~~~~~ 165 (396)
T 3dzc_A 91 TLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-----VGHVEAGLRTGNIYSPWPEEGNRKLTAA 165 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-----EEEETCCCCCSCTTSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-----EEEEECCccccccccCCcHHHHHHHHHH
Confidence 012334568999999987543322 2344555655 332222221111 112222222 3
Q ss_pred ccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcC-CCCCC-EEEEEEec
Q 016053 202 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLG-VRNED-LLFAIINS 278 (396)
Q Consensus 202 ~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g-~~~~~-~~il~vG~ 278 (396)
..+.+++.+....+.+. ..|++++++.+++|+. |...+.+.. .......++++++++| +++++ +++++.+|
T Consensus 166 ~a~~~~~~se~~~~~l~-----~~G~~~~ki~vvGn~~~d~~~~~~~~-~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 166 LTQYHFAPTDTSRANLL-----QENYNAENIFVTGNTVIDALLAVREK-IHTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp TCSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHHHH-HHHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred hcCEEECCCHHHHHHHH-----HcCCCcCcEEEECCcHHHHHHHhhhh-cccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 44555566655555443 4588888899999854 432221110 0000111467889999 45444 44445555
Q ss_pred cc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHH
Q 016053 279 VS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 354 (396)
Q Consensus 279 l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~ 354 (396)
.. ..|+++.+++|++++.+ ++|++++++. |+++ ..++.+++.. +..++|+++++. .++..+|
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~-------~~~~~~~v~~~g~~~----~~~~~l~~~~---~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAE-------QHPECQILYPVHLNP----NVREPVNKLL---KGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHHT---TTCTTEEEECCCCHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHH-------hCCCceEEEEeCCCh----HHHHHHHHHH---cCCCCEEEeCCCCHHHHHHHH
Confidence 43 35889999999998865 2378999886 5432 2344444432 444689998876 5789999
Q ss_pred HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc-CCCC
Q 016053 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL-SELH 392 (396)
Q Consensus 355 ~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t-~~gG 392 (396)
++||++|.+| | |+. +|||++|+|||++ +.++
T Consensus 306 ~~ad~vv~~S-----G-g~~-~EA~a~G~PvV~~~~~~~ 337 (396)
T 3dzc_A 306 DRAHIILTDS-----G-GIQ-EEAPSLGKPVLVMRETTE 337 (396)
T ss_dssp HHCSEEEESC-----S-GGG-TTGGGGTCCEEECCSSCS
T ss_pred HhcCEEEECC-----c-cHH-HHHHHcCCCEEEccCCCc
Confidence 9999999876 2 443 8999999999998 5555
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.4e-15 Score=139.26 Aligned_cols=255 Identities=13% Similarity=0.051 Sum_probs=147.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc------------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG------------ 141 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 141 (396)
++||++... ..||.-.-...++++|+++||+|.+++....-+ .+.+...|+++..+..
T Consensus 2 ~~~i~i~~G--GTgGHi~palala~~L~~~g~~V~~vg~~~g~e--------~~~v~~~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 2 KGNVLIMAG--GTGGHVFPALACAREFQARGYAVHWLGTPRGIE--------NDLVPKAGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp -CEEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH--------HHHTGGGTCCEEECC-------------
T ss_pred CCcEEEEcC--CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh--------hchhhhcCCcEEEEECCCcCCCCHHHHH
Confidence 468887762 224444667889999999999999998554311 1112222333322110
Q ss_pred ------------hhhhhhccCCcEEEEcCchh-hHHHHHHHhcCCCccccceeeeeeecccccCchhhhcccccccccee
Q 016053 142 ------------QETINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMI 208 (396)
Q Consensus 142 ------------~~~~~~~~~~DiV~~~~~~~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
...+.+..+||+|+++.... ......+...++| ++ +|+.. .......+++......++
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-----~v--ihe~n--~~~G~~nr~l~~~a~~v~ 142 (365)
T 3s2u_A 72 KAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-----LV--IHEQN--AVAGTANRSLAPIARRVC 142 (365)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-----EE--EEECS--SSCCHHHHHHGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-----EE--EEecc--hhhhhHHHhhccccceee
Confidence 12334568999999987543 3333445556655 33 56642 222222223222222222
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEE-EecccCCCCHHH
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI-INSVSRGKGQDL 287 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~-vG~l~~~Kg~~~ 287 (396)
.+... .+ ...++..++.|++..+.+... +.+.+++++++.++. .|+....+.-+.
T Consensus 143 ~~~~~----------~~-~~~~k~~~~g~pvr~~~~~~~-------------~~~~~~~~~~~~ilv~gGs~g~~~~~~~ 198 (365)
T 3s2u_A 143 EAFPD----------TF-PASDKRLTTGNPVRGELFLDA-------------HARAPLTGRRVNLLVLGGSLGAEPLNKL 198 (365)
T ss_dssp ESSTT----------SS-CC---CEECCCCCCGGGCCCT-------------TSSCCCTTSCCEEEECCTTTTCSHHHHH
T ss_pred ecccc----------cc-cCcCcEEEECCCCchhhccch-------------hhhcccCCCCcEEEEECCcCCccccchh
Confidence 22110 11 133557777888876665322 233455555555544 467777777778
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCC
Q 016053 288 FLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 288 li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~ 366 (396)
+.++++.+.. ..++.+++ +|.+ +.+.+.+..++.+ .++.+.++.+|+.++|++||++|.-+
T Consensus 199 ~~~al~~l~~--------~~~~~vi~~~G~~------~~~~~~~~~~~~~--~~~~v~~f~~dm~~~l~~aDlvI~ra-- 260 (365)
T 3s2u_A 199 LPEALAQVPL--------EIRPAIRHQAGRQ------HAEITAERYRTVA--VEADVAPFISDMAAAYAWADLVICRA-- 260 (365)
T ss_dssp HHHHHHTSCT--------TTCCEEEEECCTT------THHHHHHHHHHTT--CCCEEESCCSCHHHHHHHCSEEEECC--
T ss_pred hHHHHHhccc--------ccceEEEEecCcc------ccccccceecccc--cccccccchhhhhhhhccceEEEecC--
Confidence 8888776532 13445444 4443 4456666666665 45788999999999999999999422
Q ss_pred CCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
-++++.|+|++|+|+|..+.+++
T Consensus 261 ----G~~Tv~E~~a~G~P~Ilip~p~~ 283 (365)
T 3s2u_A 261 ----GALTVSELTAAGLPAFLVPLPHA 283 (365)
T ss_dssp ----CHHHHHHHHHHTCCEEECC----
T ss_pred ----CcchHHHHHHhCCCeEEeccCCC
Confidence 27899999999999998876643
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.5e-15 Score=143.33 Aligned_cols=274 Identities=12% Similarity=0.103 Sum_probs=155.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceE---EEEc----C-
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ---VISA----K- 140 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~- 140 (396)
.|++|||+++...-+ + -..+..+.++|++. |+++.++......+ . ..+.+...++. -+.. .
T Consensus 24 ~m~~~kI~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~~tG~h~~--m----~~~~~~~~~i~~~~~l~v~~~~~~ 94 (403)
T 3ot5_A 24 AMAKIKVMSIFGTRP--E-AIKMAPLVLALEKEPETFESTVVITAQHRE--M----LDQVLEIFDIKPDIDLDIMKKGQT 94 (403)
T ss_dssp --CCEEEEEEECSHH--H-HHHHHHHHHHHHTCTTTEEEEEEECC-----------CHHHHHHTTCCCSEECCCCC-CCC
T ss_pred ccccceEEEEEecCh--h-HHHHHHHHHHHHhCCCCCcEEEEEecCcHH--H----HHHHHHhcCCCCCcccccCCCCCC
Confidence 466679999984322 2 14558899999987 68987665332211 0 11112222221 0111 0
Q ss_pred ----------chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeecccc-c---Cchhhh-cccc-c
Q 016053 141 ----------GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGH-Y---FKLDYV-KHLP-L 202 (396)
Q Consensus 141 ----------~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~-~---~~~~~~-~~~~-~ 202 (396)
....+.+..+||+|++++.....+ ...+...++| ++........+ . ++.... .+.. .
T Consensus 95 ~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-----v~h~~aglrs~~~~~~~p~~~~r~~~~~~ 169 (403)
T 3ot5_A 95 LAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-----LGHVEAGLRTWNKYSPFPEEMNRQLTGVM 169 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-----EEEESCCCCCSCTTSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-----EEEEECCccccccccCCcHHHHHHHHHHh
Confidence 012334568999999987532222 2344555654 33222211111 1 111111 2222 2
Q ss_pred cccceeeccccHHHHHHHHHhhhcccCCCEEEEecC-CccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccC
Q 016053 203 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 281 (396)
Q Consensus 203 ~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ng-id~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~ 281 (396)
.+.+++.+....+.+. ..|++++++.+++|+ +|...+..... .+.+.++++ ++++++++..||...
T Consensus 170 a~~~~~~se~~~~~l~-----~~Gi~~~~i~vvGn~~~D~~~~~~~~~------~~~~~~~~l--~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 170 ADIHFSPTKQAKENLL-----AEGKDPATIFVTGNTAIDALKTTVQKD------YHHPILENL--GDNRLILMTAHRREN 236 (403)
T ss_dssp CSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHSCTT------CCCHHHHSC--TTCEEEEECCCCHHH
T ss_pred cCEEECCCHHHHHHHH-----HcCCCcccEEEeCCchHHHHHhhhhhh------cchHHHHhc--cCCCEEEEEeCcccc
Confidence 3445555555554444 458888899999885 45433321110 012344555 445566666777543
Q ss_pred -CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHc
Q 016053 282 -GKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI 357 (396)
Q Consensus 282 -~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~a 357 (396)
.|+++.+++|+.++.+. ++++++++. |+++ ..++.+++. ++..++|+++++. .++..+|++|
T Consensus 237 ~~~~l~~ll~a~~~l~~~-------~~~~~~v~~~~~~~----~~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~a 302 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVES-------REDTELVYPMHLNP----AVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKS 302 (403)
T ss_dssp HTTHHHHHHHHHHHHHHH-------CTTEEEEEECCSCH----HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHE
T ss_pred cCcHHHHHHHHHHHHHHh-------CCCceEEEecCCCH----HHHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhc
Confidence 57899999999988653 378999987 4331 133344433 2344689999987 4899999999
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCCEEEc-CCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLVL-SELH 392 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t-~~gG 392 (396)
|++|.+|- ...+|||++|+|+|++ +.++
T Consensus 303 d~vv~~SG-------g~~~EA~a~g~PvV~~~~~~~ 331 (403)
T 3ot5_A 303 YLVFTDSG-------GVQEEAPGMGVPVLVLRDTTE 331 (403)
T ss_dssp EEEEECCH-------HHHHHGGGTTCCEEECCSSCS
T ss_pred CEEEECCc-------cHHHHHHHhCCCEEEecCCCc
Confidence 99997662 3448999999999998 5554
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-14 Score=137.23 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=73.4
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++..++++.|++. .++.+.+.++++.+.+ .++++++++++.. ..+.++ ++.++|.+.|+.
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~----~~~~l~------~~~~~v~~~~~~ 300 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---------LDADVLVASGPSL----DVSGLG------EVPANVRLESWV 300 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHT---------SSSEEEEECCSSC----CCTTCC------CCCTTEEEESCC
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHc---------CCCEEEEEECCCC----Chhhhc------cCCCcEEEeCCC
Confidence 4567778889986 7788887777776643 3677777766542 111111 345799999999
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
++.++|+.||++|.+|- +.+++|||++|+|+|+++.++
T Consensus 301 -~~~~~l~~ad~~v~~~g------~~t~~Ea~a~G~P~v~~p~~~ 338 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHGG------SGTTLGALGAGVPQLSFPWAG 338 (412)
T ss_dssp -CHHHHGGGCSEEEESCC------HHHHHHHHHHTCCEEECCCST
T ss_pred -CHHHHHhcCcEEEECCc------hHHHHHHHHhCCCEEecCCch
Confidence 89999999999996554 488999999999999987764
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.9e-14 Score=131.32 Aligned_cols=237 Identities=11% Similarity=-0.009 Sum_probs=146.3
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCchh-hH-
Q 016053 86 LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVA-GK- 163 (396)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~-~~- 163 (396)
..++.+.-....+-+.+.|++..-+...... ......+...+. ..+....++|+|+.++|.. +.
T Consensus 24 ~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~DvIi~q~P~~~~~~ 89 (339)
T 3rhz_A 24 QSTAQLCQNTVTDVAVSLGYRELGIYCYQIH--TDSESELSKRLD------------GIVAGLRHGDVVIFQTPTWNTTE 89 (339)
T ss_dssp TCHHHHHHHHHHHHHHHTTCEEEEEECCCGG--GSCHHHHHHHHH------------HHTTTCCTTCEEEEEECCSSCHH
T ss_pred cchHHHHHHHHHHHHHHCCCeEEEeeccccc--cccHHHHHHHHH------------HHHhcCCCCCEEEEeCCCcchhh
Confidence 3566788888888888899987766521110 000001111111 1233457899999988753 11
Q ss_pred HHH-HHHhcCCCccccceeeeeeecccccCchh------hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEe
Q 016053 164 WLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLD------YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH 236 (396)
Q Consensus 164 ~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~~~------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ 236 (396)
+.. .+...+ ....++++.+|+..+..+... ....++.+|.+++.|..+.+.+.+ .|++..++.+++
T Consensus 90 ~~~~~~~~lk--~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~-----~G~~~~ki~~~~ 162 (339)
T 3rhz_A 90 FDEKLMNKLK--LYDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDKLRD-----FGMNVSKTVVQG 162 (339)
T ss_dssp HHHHHHHHHT--TSSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHHHHH-----TTCCCSEEEECC
T ss_pred HHHHHHHHHH--hcCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHHHHH-----cCCCcCceeecC
Confidence 111 111111 113679999999753322211 234567899999999988877653 477666664443
Q ss_pred cCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEec
Q 016053 237 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 316 (396)
Q Consensus 237 ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~ 316 (396)
+. |... ..+ ...+.+++.|+|+|++.....+..+ .++++|+|+|+
T Consensus 163 ~~-~~~~--~~~---------------~~~~~~~~~i~yaG~l~k~~~L~~l-----------------~~~~~f~ivG~ 207 (339)
T 3rhz_A 163 MW-DHPT--QAP---------------MFPAGLKREIHFPGNPERFSFVKEW-----------------KYDIPLKVYTW 207 (339)
T ss_dssp SC-CCCC--CCC---------------CCCCEEEEEEEECSCTTTCGGGGGC-----------------CCSSCEEEEES
T ss_pred CC-CccC--ccc---------------ccccCCCcEEEEeCCcchhhHHHhC-----------------CCCCeEEEEeC
Confidence 32 2110 000 0122456899999999853322211 16899999999
Q ss_pred CCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCC-C----CCCccHHHHHHHhcCCCEEEcC
Q 016053 317 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA-W----GECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 317 g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~-~----~E~fg~~~lEAma~G~PVI~t~ 389 (396)
|+. + .++ +|+|+|++ +++..+++++|+.+..... + ...+|.+++||||||+|||+++
T Consensus 208 G~~-----~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~ 271 (339)
T 3rhz_A 208 QNV-----E----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE 271 (339)
T ss_dssp CCC-----C----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred Ccc-----c----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence 972 1 244 89999986 7899999999988875220 0 1356899999999999999999
Q ss_pred CCCCC
Q 016053 390 ELHPS 394 (396)
Q Consensus 390 ~gG~~ 394 (396)
.++.+
T Consensus 272 ~~~~~ 276 (339)
T 3rhz_A 272 GIANQ 276 (339)
T ss_dssp TCTTT
T ss_pred ChhHH
Confidence 88764
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=136.69 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=61.6
Q ss_pred CCCEEEEEEecccCCC----------CHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCC
Q 016053 268 NEDLLFAIINSVSRGK----------GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 337 (396)
Q Consensus 268 ~~~~~il~vG~l~~~K----------g~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l 337 (396)
++..+++++|++...| .++.+++++++ .+++++++|++. ..+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~~~~-----~~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK------------LGFEVVVAVSDK-----LAQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGG------------GTCEEEECCCC-------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHh------------CCCEEEEEeCCc-----chhhhc------cC
Confidence 4567888889997554 45555555543 368889988764 223322 34
Q ss_pred CCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 338 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 338 ~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+++|++.|+. ++.+++..||++|. ++.+.+++|||++|+|+|+...+
T Consensus 283 ~~~v~~~~~~-~~~~ll~~ad~~v~------~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 283 PEGVLAAGQF-PLSAIMPACDVVVH------HGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp CTTEEEESCC-CHHHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCcEEEeCcC-CHHHHHhhCCEEEe------cCCHHHHHHHHHhCCCEEecCCc
Confidence 5899999998 68999999999994 44478899999999999997654
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-13 Score=130.36 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=66.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEE-EEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l-~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++.++++++|++. .++.+.+.++++.+.+ .+++++ +++|++.. .+.+ + .++++|.++|+
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~--------~~~~~~~~~~G~~~~-----~~~l----~--~~~~~v~~~~~ 290 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN--------LPGWHLVLQIGRKVT-----PAEL----G--ELPDNVEVHDW 290 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT--------CTTEEEEEECC---C-----GGGG----C--SCCTTEEEESS
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc--------CCCeEEEEEeCCCCC-----hHHh----c--cCCCCeEEEec
Confidence 3457888899987 5555555544444321 147887 56787641 1222 1 24578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++. ++|++||++|..+- +++++|||++|+|+|+++.+|
T Consensus 291 ~~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 291 VPQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp CCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCSH
T ss_pred CCHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCcc
Confidence 8777 89999999997543 378999999999999998754
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=6.8e-13 Score=126.41 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=69.9
Q ss_pred CCCEEEEEEecccCC-CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..+++++|++... ++.+.+.++++.+.+ .+++++++|++.. .+.+. +++++|.+.|+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~g~~~-----~~~l~------~~~~~v~~~~~ 290 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGE---------VDADFVLALGDLD-----ISPLG------TLPRNVRAVGW 290 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHT---------SSSEEEEECTTSC-----CGGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHc---------CCCEEEEEECCcC-----hhhhc------cCCCcEEEEcc
Confidence 456778888998654 355555555555432 4789999987752 11111 35689999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
. ++.+++..||++|. .+.+.+++|||++|+|+|+...
T Consensus 291 ~-~~~~ll~~ad~~v~------~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 291 T-PLHTLLRTCTAVVH------HGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC
T ss_pred C-CHHHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEcCC
Confidence 9 89999999999994 3446789999999999999544
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-13 Score=127.32 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=70.9
Q ss_pred CCCEEEEEEecccCCCCH-HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQ-DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~-~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+....|+. ..+++++.+. + +.|+++++++|++. ..+.+. +++++|++.|+
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~-------~~p~~~~v~~~~~~-----~~~~l~------~~~~~v~~~~~ 277 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-T-------ELPGVEAVIAVPPE-----HRALLT------DLPDNARIAES 277 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-H-------TSTTEEEEEECCGG-----GGGGCT------TCCTTEEECCS
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-c-------cCCCeEEEEEECCc-----chhhcc------cCCCCEEEecc
Confidence 345666777998765555 7777777665 4 33789999998764 222221 34579999998
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
. +..+++..||++|. ++.+.+++|||++|+|+|+....
T Consensus 278 ~-~~~~ll~~ad~~v~------~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 278 V-PLNLFLRTCELVIC------AGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp C-CGGGTGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred C-CHHHHHhhCCEEEe------CCCHHHHHHHHHhCCCEEecCCc
Confidence 7 45677899999994 44467899999999999997653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-12 Score=123.78 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+....+. +.+.++++.+. + .++++++ +|++. ..+.++ .++++|++.|+
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~----~-----~~~~~~~~~g~~~-----~~~~~~------~~~~~v~~~~~ 288 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFA----D-----TPWHVVMAIGGFL-----DPAVLG------PLPPNVEAHQW 288 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHT----T-----SSCEEEEECCTTS-----CGGGGC------SCCTTEEEESC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHh----c-----CCcEEEEEeCCcC-----ChhhhC------CCCCcEEEecC
Confidence 45677888899876652 22322222221 1 2466665 55543 111111 24579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.++. ++++.||++|..+- ..+++|||++|+|+|+...
T Consensus 289 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 289 IPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp CCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECGG
T ss_pred CCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeCC
Confidence 9777 99999999996544 4788999999999997654
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-11 Score=115.70 Aligned_cols=268 Identities=12% Similarity=0.070 Sum_probs=152.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhh-hhhcceE--EEEcC-----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHK-MWDRGVQ--VISAK----------- 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~----------- 140 (396)
.|++++...-+-- ..+.-+.++|++. +++.++...... +.. +.+. +...+++ .+.+.
T Consensus 10 ~~~~~v~GtRpe~---~k~~p~~~~l~~~-~~~~~~~tgqh~-~~~----~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 80 (385)
T 4hwg_A 10 LKVMTIVGTRPEL---IKLCCVISEFDKH-TKHILVHTGQNY-AYE----LNQVFFDDMGIRKPDYFLEVAADNTAKSIG 80 (385)
T ss_dssp CEEEEEECSHHHH---HHHHHHHHHHHHH-SEEEEEECSCHH-HHH----HTHHHHC-CCCCCCSEECCCCCCCSHHHHH
T ss_pred hheeEEEEcCHhH---HHHHHHHHHHHhc-CCEEEEEeCCCC-Chh----HHHHHHhhCCCCCCceecCCCCCCHHHHHH
Confidence 4788887321111 4677778888877 888877644321 101 2221 1112221 01111
Q ss_pred ----chhhhhhccCCcEEEEcCchhh-HHHHHHHhcCCCccccceeeeeeecccc--cCchhhhc-ccc-ccccceeecc
Q 016053 141 ----GQETINTALKADLIVLNTAVAG-KWLDAVLKEDVPRVLPNVLWWIHEMRGH--YFKLDYVK-HLP-LVAGAMIDSH 211 (396)
Q Consensus 141 ----~~~~~~~~~~~DiV~~~~~~~~-~~~~~~~~~~~~~~~~~vv~~~h~~~~~--~~~~~~~~-~~~-~~~~~~~~s~ 211 (396)
....+.+..+||+|++++.... .....+.+.++| ++......+.. .++....+ ... ..+..++.+.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-----v~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te 155 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-----IFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTE 155 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-----EEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-----EEEEeCCCccccccCcHHHHHHHHHhhhceeecCCH
Confidence 1123445689999999873221 113455666765 33222222111 11111112 222 2333444555
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc---CCCCHHH
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS---RGKGQDL 287 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~---~~Kg~~~ 287 (396)
...+.+. +.|++++++.++.|.. |.-.+.. ...+++++++++|+++++++++..+|.. ..|++..
T Consensus 156 ~~~~~l~-----~~G~~~~~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ 224 (385)
T 4hwg_A 156 HARRYLI-----AEGLPAELTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKE 224 (385)
T ss_dssp HHHHHHH-----HTTCCGGGEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHH
T ss_pred HHHHHHH-----HcCCCcCcEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHH
Confidence 4444433 4588888899998753 4322211 0123566889999987777777777643 3478999
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc-C-C--CCcEEEecCc--CCHHHHHHHcCEEE
Q 016053 288 FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-K-I--QDRVHFVNKT--LTVAPYLAAIDVLV 361 (396)
Q Consensus 288 li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~-~-l--~~~V~~~g~~--~~~~~~~~~aDv~v 361 (396)
+++|+.++.+. + ++.+++... +.+++.+++. + + .++|++++.. .++..+++.||+++
T Consensus 225 ll~al~~l~~~-------~-~~~vv~p~~---------p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv 287 (385)
T 4hwg_A 225 LLNSLQMLIKE-------Y-NFLIIFSTH---------PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL 287 (385)
T ss_dssp HHHHHHHHHHH-------H-CCEEEEEEC---------HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHhc-------C-CeEEEEECC---------hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence 99999987642 1 566666543 1234444443 3 2 3689998775 47899999999999
Q ss_pred ecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 362 QNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 362 ~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.+| |.+..||+++|+|+|+.+..
T Consensus 288 t~S-------Ggv~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 288 SDS-------GTITEEASILNLPALNIREA 310 (385)
T ss_dssp ECC-------TTHHHHHHHTTCCEEECSSS
T ss_pred ECC-------ccHHHHHHHcCCCEEEcCCC
Confidence 554 34579999999999997653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.1e-11 Score=115.38 Aligned_cols=95 Identities=15% Similarity=0.198 Sum_probs=61.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+...++++.|+.....+ +.+...++.+ .+ .++++++ +|++. ..+.++ .++++|.+.++
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al----~~-----~~~~~v~~~g~~~-----~~~~l~------~~~~~v~~~~~ 304 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAF----DG-----QPWHVVMTLGGQV-----DPAALG------DLPPNVEAHRW 304 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHH----TT-----SSCEEEEECTTTS-----CGGGGC------CCCTTEEEESC
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHH----hc-----CCcEEEEEeCCCC-----ChHHhc------CCCCcEEEEec
Confidence 45677888898755432 2222222222 11 2477777 56543 111111 34579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.++. +++..||++|..+- ..+++|||++|+|+|+...
T Consensus 305 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 305 VPHV-KVLEQATVCVTHGG------MGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp CCHH-HHHHHEEEEEESCC------HHHHHHHHHTTCCEEECCC
T ss_pred CCHH-HHHhhCCEEEECCc------HHHHHHHHHhCCCEEEeCC
Confidence 8766 99999999996443 4688999999999999654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.5e-10 Score=107.90 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCCEEEEEEecccCC-------CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCc
Q 016053 268 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 340 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-------Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (396)
++..+++++|++... +.++.+++++++ .++++++++++. ..+.+++ ++++
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~-----~~~~l~~------~~~~ 265 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAPDT-----VAEALRA------EVPQ 265 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECCHH-----HHHHHHH------HCTT
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeCCC-----CHHhhCC------CCCc
Confidence 346788889998875 567777777754 367888876532 2333331 3468
Q ss_pred EEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 341 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 341 V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|.+ |+. +..++|.+||++|..+- +++++|||++|+|+|+.+..
T Consensus 266 v~~-~~~-~~~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 266 ARV-GWT-PLDVVAPTCDLLVHHAG------GVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp SEE-ECC-CHHHHGGGCSEEEECSC------TTHHHHHHHTTCCEEECCCS
T ss_pred eEE-cCC-CHHHHHhhCCEEEeCCc------HHHHHHHHHhCCCEEEccCc
Confidence 999 987 57889999999996443 47899999999999998764
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.18 E-value=3.5e-09 Score=103.71 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=86.3
Q ss_pred HHHcCCCCC--CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEE--EEecCCCccchHHHHHHHHHHhcC
Q 016053 261 RESLGVRNE--DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV--IIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 261 r~~~g~~~~--~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~--ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
|..++++++ .++++++++ ..|..+.+++++.++.++. |+..+. ++|++. .....+.+.+.+.|
T Consensus 430 r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~v-------P~s~L~l~~~g~~~----g~~~~~~~~~~~~G 496 (631)
T 3q3e_A 430 KVDYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRA-------KVKVHFHFALGQSN----GITHPYVERFIKSY 496 (631)
T ss_dssp SCCCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHC-------SSEEEEEEEESSCC----GGGHHHHHHHHHHH
T ss_pred cccccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhC-------CCcEEEEEecCCCc----hhhHHHHHHHHHcC
Confidence 445677664 567777776 5799999999999988744 676654 366432 12233334456678
Q ss_pred CCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 337 IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 337 l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+.+++.|.|.. ++....|+.+|+++.|+. +. .|++.+|||+||+|||+....
T Consensus 497 I~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y~-GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 497 LGDSATAHPHSPYHQYLRILHNCDMMVNPFP--FG-NTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HGGGEEEECCCCHHHHHHHHHTCSEEECCSS--SC-CSHHHHHHHHTTCCEEEECCS
T ss_pred CCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--cc-CChHHHHHHHcCCCEEeccCC
Confidence 88899999986 567788999999999987 54 499999999999999996644
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-09 Score=102.35 Aligned_cols=94 Identities=9% Similarity=0.045 Sum_probs=68.0
Q ss_pred CCCEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
.+..+++..|++. ..+.++.++++++. .++++++.++....+ ..+..++|.+.++
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~------------~~~~vv~~~g~~~~~------------~~~~~~~v~~~~~ 275 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRA------------QGRRVVLSSGWAGLG------------RIDEGDDCLVVGE 275 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHH------------TTCCEEEECTTTTCC------------CSSCCTTEEEESS
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHh------------CCCEEEEEeCCcccc------------cccCCCCEEEecC
Confidence 4566778889987 66667777777765 356777765432110 1234579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.+ ..+++..||++|..+ -..++.||+++|+|+|+....|
T Consensus 276 ~~-~~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~ 314 (404)
T 3h4t_A 276 VN-HQVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKA 314 (404)
T ss_dssp CC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCST
T ss_pred CC-HHHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcc
Confidence 74 488999999999533 3478899999999999987654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.4e-08 Score=95.65 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=64.1
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEE-EEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~-ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+.. .+..+.+.++++.+.+ .+++++ ++|.+.. .+.+ . .++++|.+.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~---------~~~~~~~~~g~~~~-----~~~~----~--~~~~~v~~~~~ 312 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG---------LDWHVVLSVGRFVD-----PADL----G--EVPPNVEVHQW 312 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT---------CSSEEEEECCTTSC-----GGGG----C--SCCTTEEEESS
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc---------CCcEEEEEECCcCC-----hHHh----c--cCCCCeEEecC
Confidence 3457778889886 3443444333333321 467774 4676531 1111 1 24578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..+. ++|+.||++|.. +-.++++|||++|+|+|+....
T Consensus 313 ~~~~-~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 313 VPQL-DILTKASAFITH------AGMGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp CCHH-HHHTTCSEEEEC------CCHHHHHHHHHTTCCEEECCCS
T ss_pred CCHH-HHHhhCCEEEEC------CchhHHHHHHHcCCCEEEecCc
Confidence 8776 899999999853 2348999999999999998764
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.2e-10 Score=107.37 Aligned_cols=93 Identities=13% Similarity=0.029 Sum_probs=66.1
Q ss_pred CCEEEEEEecccC-----CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEE
Q 016053 269 EDLLFAIINSVSR-----GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 343 (396)
Q Consensus 269 ~~~~il~vG~l~~-----~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~ 343 (396)
...++++.|++.. .|.+..++++++. .++++++++++. ..+.+ . +++++|.+
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~-----~~~~l----~--~~~~~v~~ 323 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFDAQ-----QLEGV----A--NIPDNVRT 323 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCCTT-----TTSSC----S--SCCSSEEE
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEECCc-----chhhh----c--cCCCCEEE
Confidence 4568888999875 4888888888864 367888877653 11111 1 34679999
Q ss_pred ecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 344 VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 344 ~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++.++ .++|.+||++|. .+.+.++.|||++|+|+|+....
T Consensus 324 ~~~~~~-~~ll~~ad~~V~------~~G~~t~~Ea~~~G~P~i~~p~~ 364 (441)
T 2yjn_A 324 VGFVPM-HALLPTCAATVH------HGGPGSWHTAAIHGVPQVILPDG 364 (441)
T ss_dssp CCSCCH-HHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred ecCCCH-HHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEeCCc
Confidence 999865 788999999995 23357899999999999998764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-08 Score=95.01 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=62.8
Q ss_pred CCCEEEEEEecccCCCC-HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg-~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..+++..|++...++ .+.+.+++..+.+ .+.++++.+.+.+.+ ....+++++.+.++
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~~~~~~~-----------~~~~~~~~v~~~~~ 295 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD---------VDAEFVLTLGGGDLA-----------LLGELPANVRVVEW 295 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG---------SSSEEEEECCTTCCC-----------CCCCCCTTEEEECC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc---------cCceEEEEecCcccc-----------ccccCCCCEEEEee
Confidence 34567777788766544 3333333333321 567777766543111 11245689999998
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
. ...++|..+|++|. .+-.+++.|||++|+|+|+....+
T Consensus 296 ~-p~~~lL~~~~~~v~------h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 296 I-PLGALLETCDAIIH------HGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC--
T ss_pred c-CHHHHhhhhhheec------cCCccHHHHHHHhCCCEEEecCcc
Confidence 7 46789999999983 444578999999999999976654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-07 Score=90.41 Aligned_cols=92 Identities=7% Similarity=0.086 Sum_probs=65.2
Q ss_pred CCEEEEEEecc-cCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 269 EDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 269 ~~~~il~vG~l-~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+..++++.|++ ...+..+.++++++.+ +.+++++ |.+. .. ...++++|.+.++
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~-----~~--------~~~~~~~v~~~~~ 292 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH------------GRRVILSRGWAD-----LV--------LPDDGADCFAIGE 292 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT------------TCCEEECTTCTT-----CC--------CSSCGGGEEECSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC------------CCeEEEEeCCCc-----cc--------ccCCCCCEEEeCc
Confidence 35678888998 4777778888887653 4556655 6543 11 0234578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++ .+++.+||++|..+- .++++|||++|+|+|+....+
T Consensus 293 ~~~-~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 293 VNH-QVLFGRVAAVIHHGG------AGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp CCH-HHHGGGSSEEEECCC------HHHHHHHHHHTCCEEECCCST
T ss_pred CCh-HHHHhhCCEEEeCCC------hhHHHHHHHcCCCEEECCCCC
Confidence 865 578899999996332 479999999999999987654
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.1e-07 Score=88.88 Aligned_cols=91 Identities=10% Similarity=0.099 Sum_probs=64.0
Q ss_pred CCEEEEEEeccc---CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 269 EDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 269 ~~~~il~vG~l~---~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+..++++.|+.. ..+..+.++++++. .+.+++++ |.+. . + . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~-----~-~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRA------------QGRRVILSRGWTE-----L-V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHH------------TTCCEEEECTTTT-----C-C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHH------------CCCeEEEEeCCcc-----c-c-c------cCCCCCEEEe
Confidence 356777789875 34556666666654 24666665 6542 1 0 0 2356789999
Q ss_pred cCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++.+ ..++|.+||++|. .+-..++.||+++|+|+|+....
T Consensus 292 ~~~~-~~~ll~~~d~~v~------~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 292 DEVN-FQALFRRVAAVIH------HGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp SSCC-HHHHGGGSSEEEE------CCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccCC-hHHHhccCCEEEe------cCChhHHHHHHHcCCCEEEccCC
Confidence 9985 6789999999995 23357999999999999998764
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.3e-07 Score=78.36 Aligned_cols=91 Identities=5% Similarity=0.041 Sum_probs=68.1
Q ss_pred CCCEEEEEEeccc---CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 268 NEDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 268 ~~~~~il~vG~l~---~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+...+++++|++. +.|.+..++++++. .+.++++++++... + .++++|++.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~~~-----~---------~~~~~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ------------IPQKVLWRFDGNKP-----D---------TLGLNTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT------------SSSEEEEECCSSCC-----T---------TCCTTEEEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh------------CCCeEEEEECCcCc-----c---------cCCCcEEEe
Confidence 4567888899985 56777777777753 24688888765411 0 345789999
Q ss_pred cCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|+.++ .+++ .+||++|.. +.+.+++|||++|+|+|+....
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCS
T ss_pred cCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccch
Confidence 99865 5677 899999963 3358999999999999999875
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.2e-06 Score=75.74 Aligned_cols=240 Identities=11% Similarity=0.041 Sum_probs=129.2
Q ss_pred cEEEEEeccCCC-CCh-HHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--h---hhhhh
Q 016053 75 KLVLLVSHELSL-SGG-PLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--Q---ETINT 147 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~-~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~ 147 (396)
|||+|-...... |.| -.+...||++|+ +|.+++...+.. +.+ ..|+.+..... . ....+
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~-------~~~---~~g~~v~~l~~~d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGS-------LID---EIPYPVYELSSESIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTC-------CGG---GCCSCEEECSSSCHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHh-------HHH---HCCCeEEEcCccCHHHHHHHHH
Confidence 478888765444 433 377888888887 788887443211 111 22566655432 1 22334
Q ss_pred ccCCcEEEEcCc-hhhHHHHHHHhc-CCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhh
Q 016053 148 ALKADLIVLNTA-VAGKWLDAVLKE-DVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERL 225 (396)
Q Consensus 148 ~~~~DiV~~~~~-~~~~~~~~~~~~-~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (396)
..++|+++.... ....|...++.. +. +++ .+.+.. . . ..+|.++........ . .|
T Consensus 67 ~~~~d~lIvD~Y~~~~~~~~~lk~~~~~-----~i~-~iDD~~-~-------~--~~~Dllin~~~~~~~---~----~Y 123 (282)
T 3hbm_A 67 EEKFELLIIDHYGISVDDEKLIKLETGV-----KIL-SFDDEI-K-------P--HHCDILLNVNAYAKA---S----DY 123 (282)
T ss_dssp HHTCSEEEEECTTCCHHHHHHHHHHHCC-----EEE-EECSSC-C-------C--CCCSEEEECSTTCCG---G----GG
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHhcCc-----EEE-EEecCC-C-------c--ccCCEEEeCCcccch---h----hc
Confidence 468999987763 444565555542 32 233 233321 0 0 123444433322211 0 11
Q ss_pred -cccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHc-CCCC-CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 226 -RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL-GVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 226 -g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~-g~~~-~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
+.-+.... +.-|.+.....+. +.+.- ...+ .+.+++++|......-...+++++..
T Consensus 124 ~~~~p~~~~-~l~G~~Y~~lR~e------------F~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~-------- 182 (282)
T 3hbm_A 124 EGLVPFKCE-VRCGFSYALIREE------------FYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPK-------- 182 (282)
T ss_dssp TTTCC-CCE-EEESGGGCCCCHH------------HHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCT--------
T ss_pred cccCCCCCe-EeeCCcccccCHH------------HHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhc--------
Confidence 11111122 2336443333221 11110 0112 23455667775544433444444432
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcC
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 382 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G 382 (396)
..+ -.+|.|.+. +..+++++..++. +++.+.++.+++.++|++||++|.+ .|.++.|++++|
T Consensus 183 ---~~~-i~vv~G~~~----~~~~~l~~~~~~~---~~v~v~~~~~~m~~~m~~aDlvI~~-------gG~T~~E~~~~g 244 (282)
T 3hbm_A 183 ---TKI-ISIATSSSN----PNLKKLQKFAKLH---NNIRLFIDHENIAKLMNESNKLIIS-------ASSLVNEALLLK 244 (282)
T ss_dssp ---TSC-EEEEECTTC----TTHHHHHHHHHTC---SSEEEEESCSCHHHHHHTEEEEEEE-------SSHHHHHHHHTT
T ss_pred ---CCC-EEEEECCCc----hHHHHHHHHHhhC---CCEEEEeCHHHHHHHHHHCCEEEEC-------CcHHHHHHHHcC
Confidence 023 456678765 3467777766643 4799999999999999999999962 258999999999
Q ss_pred CCEEEcCC
Q 016053 383 LPVLVLSE 390 (396)
Q Consensus 383 ~PVI~t~~ 390 (396)
+|.|....
T Consensus 245 ~P~i~ip~ 252 (282)
T 3hbm_A 245 ANFKAICY 252 (282)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 99988543
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.9e-06 Score=84.13 Aligned_cols=130 Identities=19% Similarity=0.164 Sum_probs=95.3
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH---HHHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE---LRNYV 332 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~---l~~~~ 332 (396)
+++++|+ +++.+.++++.|+..+||++. ++..+..+.+ ++++ .....+.++++.|.+.+.......- +.+.+
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va 582 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFR-IKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIA 582 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHH-HHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHH-HhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHH
Confidence 4777776 567899999999999999999 8888887764 3321 0011368999999987664322111 33333
Q ss_pred H----hcCCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 333 M----QKKIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 333 ~----~~~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
+ +-.+++ +|.|+.. . +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--
T Consensus 583 ~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLD 648 (796)
T 2c4m_A 583 DLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMD 648 (796)
T ss_dssp HHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESS
T ss_pred HHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccC
Confidence 3 124567 7888864 3 4566789999999999996579999999999999999997643
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.3e-06 Score=83.78 Aligned_cols=130 Identities=16% Similarity=0.104 Sum_probs=95.7
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH----HHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE----LRNY 331 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~----l~~~ 331 (396)
+++++|+ +++.+.++++.|+..+||++. ++..+..+.+ ++++ .....+.++++.|.+.+.... .+. +.+.
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q~If~GKA~P~y~~-aK~iIk~i~~v 591 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKE-IRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKV 591 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHH-HHTCTTCCCCCEEEEEECCCCTTCHH-HHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHH-HhcCCCCCCCCeEEEEEecCChhHHH-HHHHHHHHHHH
Confidence 4777786 567899999999999999999 8888887764 3332 001136899999998766432 222 3333
Q ss_pred HH----hcCCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 332 VM----QKKIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 332 ~~----~~~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++ +-.+++ +|.|+.. . +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--|
T Consensus 592 a~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 592 ADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCC
Confidence 33 124556 7888864 3 44667899999999999965799999999999999999976433
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-05 Score=81.03 Aligned_cols=131 Identities=18% Similarity=0.060 Sum_probs=95.0
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHHH-HHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH---HHHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDLF-LHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE---LRNYV 332 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~l-i~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~---l~~~~ 332 (396)
+++.+|+ +++.+.++++.|+..+||++.+ +..+..+.+. .++ .....+.++++.|.+.+.......- +.+.+
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i-~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va 616 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI-KKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIG 616 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHH-HHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHH-HhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHH
Confidence 6666776 5678999999999999999998 7888776532 222 0001168999999987664322111 44444
Q ss_pred Hhc----CCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 333 MQK----KIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 333 ~~~----~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+.. .+++ +|.|+.. - +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--|
T Consensus 617 ~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 617 DVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp HHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred HHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecC
Confidence 422 2346 7888864 3 44667899999999999965799999999999999999997654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=9.8e-06 Score=82.53 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=91.3
Q ss_pred HHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC-
Q 016053 260 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ- 338 (396)
Q Consensus 260 ~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~- 338 (396)
.|..+|++++.++++++.++ .|=-+.++++..++.++ .|+.+|++..... ..++.+++.+++.|+.
T Consensus 513 ~R~~~gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~-------vP~S~L~Ll~~~~----~~~~~l~~~~~~~gi~~ 579 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNFNQL--YKIDPSTLQMWANILKR-------VPNSVLWLLRFPA----VGEPNIQQYAQNMGLPQ 579 (723)
T ss_dssp EGGGGTCCTTSEEEECCSCG--GGCCHHHHHHHHHHHHH-------CSSEEEEEEETTG----GGHHHHHHHHHHTTCCG
T ss_pred chhhcCCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHHh-------CCCCeEEEEeCcH----HHHHHHHHHHHhcCCCc
Confidence 47788999998888777665 67778888888887764 3899999987653 3467888899988876
Q ss_pred CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 339 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 339 ~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++|+|.+.. ++-...|..+||++-|-- -+-|.+..||+.+|+|||+-.
T Consensus 580 ~r~~f~~~~~~~~~l~~~~~~Di~LDt~p---~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 580 NRIIFSPVAPKEEHVRRGQLADVCLDTPL---CNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GGEEEEECCCHHHHHHHGGGCSEEECCSS---SCCSHHHHHHHHTTCCEEBCC
T ss_pred CeEEECCCCCHHHHHHHhCCCeEEeCCCC---cCCHHHHHHHHHcCCCEEEcc
Confidence 789999975 456667788999998765 466899999999999999865
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0035 Score=57.93 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=72.0
Q ss_pred HHHHHHcCCCCC-CEEEEEEecccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHh
Q 016053 258 EHVRESLGVRNE-DLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 334 (396)
Q Consensus 258 ~~~r~~~g~~~~-~~~il~vG~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~ 334 (396)
.++.++.|++++ .++.+..|.-.+.|.+ +.+.++++.+.+ .++++++.|... +++..++..+.
T Consensus 173 ~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~---------~g~~vvl~g~~~-----e~~~~~~i~~~ 238 (349)
T 3tov_A 173 QEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGR---------LGYKTVFFGGPM-----DLEMVQPVVEQ 238 (349)
T ss_dssp HHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHH---------HTCEEEECCCTT-----THHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHh---------CCCeEEEEeCcc-----hHHHHHHHHHh
Confidence 345556777654 4566666765566665 466666666644 256778887643 45555666665
Q ss_pred cCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 335 KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 335 ~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.+. ..+.+.|.. .++..+++.||++|-+-. |..-+ |.|+|+|+|+-=
T Consensus 239 ~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~Ds------G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 239 MET-KPIVATGKFQLGPLAAAMNRCNLLITNDS------GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CSS-CCEECTTCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHTTTCCEEEEC
T ss_pred ccc-ccEEeeCCCCHHHHHHHHHhCCEEEECCC------CHHHH-HHhcCCCEEEEE
Confidence 542 346666764 689999999999996432 34434 999999999853
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.015 Score=52.90 Aligned_cols=102 Identities=13% Similarity=0.060 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 264 LGVRNEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 264 ~g~~~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
.+..++.++++..|.-.+.|.+. .+.+.++.+. + .++++++.++++ .+.+..++..+.. +++
T Consensus 173 ~~~~~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~----~-----~~~~vvl~~g~~----~e~~~~~~i~~~~---~~~ 236 (326)
T 2gt1_A 173 LPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLA----D-----SGIRIKLPWGAP----HEEERAKRLAEGF---AYV 236 (326)
T ss_dssp CCTTTTSEEEEECCCSSGGGSCCHHHHHHHHHHTT----T-----TCCEEEECCSSH----HHHHHHHHHHTTC---TTE
T ss_pred ccccCCCEEEEEeCCCCccccCCHHHHHHHHHHHH----H-----CCCcEEEecCCH----HHHHHHHHHHhhC---Ccc
Confidence 44445667777777766667765 4555554442 2 467888873332 2334444444433 246
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
.+.|.. .++.++++.||++|-.-. |..=+ |.|+|+|+|+-
T Consensus 237 ~l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 237 EVLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITV 278 (326)
T ss_dssp EECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred cccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEE
Confidence 777764 789999999999997433 34444 77799999975
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00044 Score=63.85 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=73.4
Q ss_pred HHHHHHHcCCC-CCCEEEEEEec-ccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH
Q 016053 257 REHVRESLGVR-NEDLLFAIINS-VSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 332 (396)
Q Consensus 257 ~~~~r~~~g~~-~~~~~il~vG~-l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~ 332 (396)
++++++.+|++ ++.++++..|. ..+.|.+. .+.++++.+.+ .++++++.|... +.+..++..
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~g~~~-----e~~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH---------CCCeEEEEeChh-----hHHHHHHHH
Confidence 45567788886 44566677776 44667765 67777766644 368888888643 344444444
Q ss_pred HhcCC---CCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 333 MQKKI---QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 333 ~~~~l---~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+..+- .+.+.+.|.. .++.++++.||++|-+.. |. +..|.|+|+|+|+--
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~-~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------GL-MHVAAALNRPLVALY 287 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------HH-HHHHHHTTCCEEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------HH-HHHHHHcCCCEEEEE
Confidence 43220 1234566764 789999999999997644 23 444999999999853
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0079 Score=61.38 Aligned_cols=260 Identities=11% Similarity=0.108 Sum_probs=142.7
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++++|+|.+.. ...++-++.+.+.+... ..++++.+++..... .....++..+.......+......
T Consensus 351 ~~~~ivf~s~~g~~~~~n~~~i~~~l~~~-~~~~~~~w~~~~~~~-----------~~~~~~~~~v~~~s~~~~~~l~~a 418 (729)
T 3l7i_A 351 KPKTIVFESFGGKNYSDSPKYIYEYMQKY-YPNYRYIWSFKNPDK-----------NVVPGSAEKVKRNSAEYYQAYSEA 418 (729)
T ss_dssp EEEEEEEEBGGGTBSCHHHHHHHHHHHHH-CTTSEEEEEESSGGG-----------CCCCSSCEEEETTSHHHHHHHHHE
T ss_pred cCCEEEEEECCCCCCCCCHHHHHHHHHHh-CCCceEEEEEcCccc-----------ccCCCCcEEEEECCHHHHHHHhcC
Confidence 34567777744 33466667776555432 235899988854211 011235566666555555555566
Q ss_pred cEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh--------------------hhccccccccceeecc
Q 016053 152 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD--------------------YVKHLPLVAGAMIDSH 211 (396)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~--------------------~~~~~~~~~~~~~~s~ 211 (396)
++++.++..+..+ .+.-...++.+-|+. .++.. ..+.....|..++.+.
T Consensus 419 ~~~v~n~~~~~~~--------~k~~~~~~iq~wHG~---~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~ 487 (729)
T 3l7i_A 419 SHWVSNARTPLYL--------NKKENQTYIQTWHGT---PLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNR 487 (729)
T ss_dssp EEEEESSCCCTTS--------CCCTTCEEEECCSSC---CSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSH
T ss_pred cEEEECCCCcccc--------ccCCCcEEEECCCCC---chhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCH
Confidence 7777766443210 011112344444543 11110 1112234566777776
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCC----CC---
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG----KG--- 284 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~----Kg--- 284 (396)
...+.+. +.+++++.+ ++..|..-.. ...+.......++.+++++++++++.+|+|+-..... +|
T Consensus 488 ~~~~~~~----~~f~~~~~~--i~~~G~PR~D--~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~ 559 (729)
T 3l7i_A 488 YSTEIFR----SAFWMDEER--ILEIGYPRND--VLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYL 559 (729)
T ss_dssp HHHHHHH----HHTCCCGGG--EEESCCGGGH--HHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSC
T ss_pred HHHHHHH----HHhCCCcce--EEEcCCCchH--HHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccc
Confidence 6655543 366766554 4455643321 1111111233467799999999999999999776542 11
Q ss_pred --HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEe
Q 016053 285 --QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 362 (396)
Q Consensus 285 --~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~ 362 (396)
...-++.+.+ .+. .++.+++-.- ..+.+.....+..+.+.-.....++.++|..||++|-
T Consensus 560 ~~~~~~~~~l~~---~l~------~~~~li~r~H---------p~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lIT 621 (729)
T 3l7i_A 560 FELKIDLDNLYK---ELG------DDYVILLRMH---------YLISNALDLSGYENFAIDVSNYNDVSELFLISDCLIT 621 (729)
T ss_dssp CCCTTCHHHHHH---HHT------TTEEEEECCC---------HHHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEE
T ss_pred cchhhHHHHHHH---HcC------CCeEEEEecC---------cchhccccccccCCcEEeCCCCcCHHHHHHHhCEEEe
Confidence 1111223322 221 4777776553 1111111112344566666666799999999999994
Q ss_pred cCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 363 NSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 363 pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
= ++-++.|++..++|||-.
T Consensus 622 D-------ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 622 D-------YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp S-------SCTHHHHHGGGCCCEEEE
T ss_pred e-------chHHHHhHHhhCCCEEEe
Confidence 2 457799999999999977
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0036 Score=53.68 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=39.0
Q ss_pred cEEEecCcCCHHHHHH-HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 340 RVHFVNKTLTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 340 ~V~~~g~~~~~~~~~~-~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++...++.+++.++|+ +||++|. -+-..++.|++++|+|.|.-..+
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIs------haGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVIS------HAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEE------SSCHHHHHHHHHTTCCCCEECCS
T ss_pred eEEEeeccchHHHHHHhcCCEEEE------CCcHHHHHHHHHhCCCEEEEcCc
Confidence 5677788899999999 9999994 34468899999999999987654
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=94.06 E-value=0.26 Score=47.18 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=58.9
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++..+++..|+....-+.+.+.+.+..+.+ .+.+++++-..... ...+.+.+.... .+++..+++.
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~---------~~~~~l~~~~~~~~--~l~~~~~~~~~~---~~~~~v~~w~ 340 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKH---------SGVRFLWSNSAEKK--VFPEGFLEWMEL---EGKGMICGWA 340 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHH---------HTCEEEEECCCCGG--GSCTTHHHHHHH---HCSEEEESSC
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHh---------CCCcEEEEECCCcc--cCChhHHHhhcc---CCCEEEEccC
Confidence 455777778887632233334444433322 25666655432100 011122222210 2578888887
Q ss_pred CCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 348 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 348 ~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++ ++|+ ++|+||. -+-.++++||+++|+|+|+-...
T Consensus 341 pq~-~vL~h~~~~~fvt------h~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 341 PQV-EVLAHKAIGGFVS------HCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp CHH-HHHHSTTEEEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred CHH-HHhCCCccCeEEe------cCCchhHHHHHHcCCCeeeccch
Confidence 665 5776 6778883 34458899999999999997653
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.083 Score=50.51 Aligned_cols=46 Identities=20% Similarity=0.132 Sum_probs=36.3
Q ss_pred CcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 339 DRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+++...++..+. ++|+ ++|++|. -+-.++++||+++|+|+|+-...
T Consensus 325 ~~~~v~~w~pq~-~vL~h~~~~~fvt------h~G~~S~~Eal~~GvP~i~~P~~ 372 (456)
T 2c1x_A 325 GYGMVVPWAPQA-EVLAHEAVGAFVT------HCGWNSLWESVAGGVPLICRPFF 372 (456)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCS
T ss_pred CceEEecCCCHH-HHhcCCcCCEEEe------cCCcchHHHHHHhCceEEecCCh
Confidence 678888987664 7888 6778883 34468889999999999997653
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=93.63 E-value=0.35 Score=46.06 Aligned_cols=102 Identities=11% Similarity=-0.005 Sum_probs=60.5
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHH-HHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR-NYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~-~~~~~~~l~~~V~~~g~ 346 (396)
++..+++..|+.... ..+.+.+.+..+.+ .+.+++++-... ..+.+. ...++ .++++...++
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~---------~~~~flw~~~~~-----~~~~lp~~~~~~--~~~~~~vv~w 334 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEE---------CGFPFIWSFRGD-----PKEKLPKGFLER--TKTKGKIVAW 334 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHH---------HCCCEEEECCSC-----HHHHSCTTHHHH--TTTTEEEESS
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHh---------CCCeEEEEeCCc-----chhcCCHhHHhh--cCCceEEEee
Confidence 456677778887643 23444444443322 355666654332 111111 11121 2368888898
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..+ .++++.+++-++-++ |--++++||+++|+|+|+-...
T Consensus 335 ~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 335 APQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp CCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCS
T ss_pred CCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCccc
Confidence 866 589999995443343 3347889999999999997653
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=93.50 E-value=0.32 Score=46.76 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC--ccc-hHHHHHHHHHHhcCCCCcEEEe
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN--AQT-KFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~--~~~-~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+...+++..|++.. ...+.+.+.+..+.+ .+.+++++-.... ++. ...+.+.+. . ++++...
T Consensus 294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~---------~~~~~l~~~~~~~~~~~~~~l~~~~~~~---~--~~~~~v~ 358 (482)
T 2pq6_A 294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLAN---------CKKSFLWIIRPDLVIGGSVIFSSEFTNE---I--ADRGLIA 358 (482)
T ss_dssp TTCEEEEECCSSSC-CCHHHHHHHHHHHHH---------TTCEEEEECCGGGSTTTGGGSCHHHHHH---H--TTTEEEE
T ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHh---------cCCcEEEEEcCCccccccccCcHhHHHh---c--CCCEEEE
Confidence 34567777788653 234444444443322 4567766543210 000 011222222 2 3689999
Q ss_pred cCcCCHHHHHHHcCE--EEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYLAAIDV--LVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~~~aDv--~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++..++ ++|+.+++ || + -|-.++++||+++|+|+|+-...
T Consensus 359 ~~~pq~-~~L~h~~~~~~v--t----h~G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 359 SWCPQD-KVLNHPSIGGFL--T----HCGWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp SCCCHH-HHHTSTTEEEEE--E----CCCHHHHHHHHHHTCCEEECCCS
T ss_pred eecCHH-HHhcCCCCCEEE--e----cCCcchHHHHHHcCCCEEecCcc
Confidence 988765 58977666 66 2 34458899999999999998654
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=87.71 E-value=1.5 Score=39.64 Aligned_cols=78 Identities=23% Similarity=0.184 Sum_probs=46.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh--------
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-------- 143 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 143 (396)
|++|||+|+ |+..+.....++|.+.|++|..+....+.... ..++.+.....|++++.....+
T Consensus 20 ~~~mrIvf~-------G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~--~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~ 90 (329)
T 2bw0_A 20 FQSMKIAVI-------GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGK--ADPLGLEAEKDGVPVFKYSRWRAKGQALPD 90 (329)
T ss_dssp -CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSC--CCHHHHHHHHHTCCEEECSCCEETTEECHH
T ss_pred CCCCEEEEE-------cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCC--CCHHHHHHHHcCCCEEecCcccccccccHH
Confidence 455799988 23456656778888889998755532211111 1123445566788887654321
Q ss_pred --hhhhccCCcEEEEcC
Q 016053 144 --TINTALKADLIVLNT 158 (396)
Q Consensus 144 --~~~~~~~~DiV~~~~ 158 (396)
...+..++|++++-.
T Consensus 91 ~~~~l~~~~~Dliv~a~ 107 (329)
T 2bw0_A 91 VVAKYQALGAELNVLPF 107 (329)
T ss_dssp HHHHHHTTCCSEEEESS
T ss_pred HHHHHHhcCCCEEEEee
Confidence 223457899998765
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=87.42 E-value=1.8 Score=36.72 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=40.2
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcce-EEEEcCchhhhh-
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV-QVISAKGQETIN- 146 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 146 (396)
...++.|+|++.. |....=..+++.|.++|++|.++...... . ..+...++ .++.......+.
T Consensus 16 ~~~l~~~~ilVtG------atG~iG~~l~~~L~~~G~~V~~~~R~~~~--------~-~~~~~~~~~~~~~~Dl~~~~~~ 80 (236)
T 3e8x_A 16 NLYFQGMRVLVVG------ANGKVARYLLSELKNKGHEPVAMVRNEEQ--------G-PELRERGASDIVVANLEEDFSH 80 (236)
T ss_dssp -----CCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESSGGG--------H-HHHHHTTCSEEEECCTTSCCGG
T ss_pred ccCcCCCeEEEEC------CCChHHHHHHHHHHhCCCeEEEEECChHH--------H-HHHHhCCCceEEEcccHHHHHH
Confidence 3455667877553 33356667888888999999998744221 1 11222345 554433322222
Q ss_pred hccCCcEEEEcC
Q 016053 147 TALKADLIVLNT 158 (396)
Q Consensus 147 ~~~~~DiV~~~~ 158 (396)
...++|+|+.+.
T Consensus 81 ~~~~~D~vi~~a 92 (236)
T 3e8x_A 81 AFASIDAVVFAA 92 (236)
T ss_dssp GGTTCSEEEECC
T ss_pred HHcCCCEEEECC
Confidence 235789987665
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=87.32 E-value=2.4 Score=40.61 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=30.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQK 114 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~ 114 (396)
++|+++. ....|.-.-+..|++.|.++ ||+|++++...
T Consensus 7 ~~vl~~p--~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 7 PHVAIIP--SPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp CEEEEEC--CSCHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred cEEEEec--CcchhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 5777776 33456668999999999998 99999998543
|
| >3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=87.16 E-value=22 Score=34.13 Aligned_cols=168 Identities=7% Similarity=0.032 Sum_probs=89.9
Q ss_pred ccccceeeccccH-HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc
Q 016053 202 LVAGAMIDSHVTA-EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 280 (396)
Q Consensus 202 ~~~~~~~~s~~~~-~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~ 280 (396)
..+.+++.+.... +.+++++.....++.+.+.-++ .+|.- ...|.-..++...+.+.++++++....
T Consensus 206 qPdilvcRs~~~l~~~~r~KiaLfc~V~~~~VI~i~-Dvdti--Y~vpl~L~~qGl~~~~~~~l~l~~~~~--------- 273 (535)
T 3nva_A 206 QPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSY-DVETS--YEVPIILESQKLVSKILSRLKLEDRQV--------- 273 (535)
T ss_dssp CCSEEEEEESSCCCHHHHHHHHHHTTCCGGGEEEEE-CCSCG--GGHHHHHHHHTHHHHHHHHTTCCCCCC---------
T ss_pred CCCEEEEecCCCCCHHHHHhhhhhcCCChhceEecC-CCChH--HHhHHHHHHCCcHHHHHHHcCCCCCCC---------
Confidence 4566666664333 5556555545567776665555 33432 222222333444567888899853211
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHH---HHHHHHHhcCCCCcEEEecCc--CC--H--H
Q 016053 281 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFES---ELRNYVMQKKIQDRVHFVNKT--LT--V--A 351 (396)
Q Consensus 281 ~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~---~l~~~~~~~~l~~~V~~~g~~--~~--~--~ 351 (396)
....+..+++.+... . -...+++-+||+-.+-...|.. .++......+..-++.++... ++ . .
T Consensus 274 ~~~~w~~~~~~~~~~-----~---~~~~v~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~~ 345 (535)
T 3nva_A 274 DLTDWISFVNNIKGI-----N---SKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLN 345 (535)
T ss_dssp CCHHHHHHHHHHHTT-----T---CCCEEEEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCT
T ss_pred CHHHHHHHHHHhhcc-----C---CCCeeEEEEEecCcCCchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccchh
Confidence 122233333333200 0 1146899999987644444544 344444455555556666643 11 1 4
Q ss_pred HHHHHcCEEEecCCCCCC----CccHHHHHHHhcCCCEEEcCC
Q 016053 352 PYLAAIDVLVQNSQAWGE----CFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 352 ~~~~~aDv~v~pS~~~~E----~fg~~~lEAma~G~PVI~t~~ 390 (396)
+.+..+|.+++|.-+ .+ +.-..+-+|...++|+++.-.
T Consensus 346 ~~L~~~DgIIlpGG~-G~~~~~g~i~~ir~a~~~~~PiLGICl 387 (535)
T 3nva_A 346 EILGNVNGIIVLPGF-GSRGAEGKIKAIKYAREHNIPFLGICF 387 (535)
T ss_dssp TTTTSCSEEEECCCC-SSTTHHHHHHHHHHHHHHTCCEEEETH
T ss_pred hhccCCCEEEECCCC-CCccHHHHHHHHHHHHHcCCcEEEECc
Confidence 678899999988641 21 111234566778999987643
|
| >4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=85.78 E-value=1.3 Score=39.09 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=29.5
Q ss_pred cccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
.|+.||||+|.......+.. ......++.|++.|++|.++-
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 57778999998654455544 566677899999999999986
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=82.92 E-value=2.9 Score=37.52 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=46.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc----hhhhhhhhhhhhhcceEEEEcCch----
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQ---- 142 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---- 142 (396)
||++|||+|+.. ..+.....++|.+.||+|..+....+... .....++.+.....|++++.....
T Consensus 4 m~~~mrivf~Gt-------~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~ 76 (318)
T 3q0i_A 4 MSQSLRIVFAGT-------PDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDE 76 (318)
T ss_dssp ---CCEEEEECC-------SHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHH
T ss_pred cccCCEEEEEec-------CHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHH
Confidence 566789998863 24555556777788999886553321111 011223455666778888754332
Q ss_pred -hhhhhccCCcEEEEcC
Q 016053 143 -ETINTALKADLIVLNT 158 (396)
Q Consensus 143 -~~~~~~~~~DiV~~~~ 158 (396)
.......++|++++-.
T Consensus 77 ~~~~l~~~~~Dliv~~~ 93 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVA 93 (318)
T ss_dssp HHHHHHTTCCSEEEESS
T ss_pred HHHHHHhcCCCEEEEeC
Confidence 1234568999998865
|
| >2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A* | Back alignment and structure |
|---|
Probab=81.28 E-value=2.1 Score=35.24 Aligned_cols=40 Identities=15% Similarity=0.083 Sum_probs=29.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+||||+++.... .|-.++....+++.+.+.|++|.++..
T Consensus 3 M~M~kilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSR-HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred CCcceEEEEEeCC-CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 5567899888543 344458888889999999999998863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 396 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.97 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.97 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.97 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.87 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.8 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.79 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.03 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.72 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.52 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.3 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.24 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.46 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.39 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.34 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.28 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 96.28 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 96.08 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 96.02 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 95.6 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 94.76 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.27 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 93.65 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 89.91 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.01 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 87.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 85.93 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 84.76 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.72 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 84.5 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 82.64 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 82.46 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 82.25 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 81.59 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 81.2 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 81.01 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 80.43 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=2.5e-31 Score=258.32 Aligned_cols=302 Identities=16% Similarity=0.114 Sum_probs=190.9
Q ss_pred cEEEEEeccCC----CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhh---------hh-----hhhhcceEE
Q 016053 75 KLVLLVSHELS----LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL---------EH-----KMWDRGVQV 136 (396)
Q Consensus 75 ~kIl~v~~~~~----~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~ 136 (396)
|||++|+.+.. .||...++..|+++|+++||+|+|+++..+.-........ .. .....++++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 58999997643 3776789999999999999999999853211000000000 00 001123333
Q ss_pred EEcCch------------------------------------hhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccce
Q 016053 137 ISAKGQ------------------------------------ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180 (396)
Q Consensus 137 ~~~~~~------------------------------------~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~v 180 (396)
+.+... +......+||+||+|+.........+...+.+ ..++
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~--~ip~ 158 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETP--EIPS 158 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSC--CCCE
T ss_pred EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCC--CCCE
Confidence 211000 00112358999999986554433333333322 2468
Q ss_pred eeeeeeccccc-Cchhh-------------------------hccccccccceeeccccHHHHHHHH-----HhhhcccC
Q 016053 181 LWWIHEMRGHY-FKLDY-------------------------VKHLPLVAGAMIDSHVTAEYWKNRT-----RERLRIKM 229 (396)
Q Consensus 181 v~~~h~~~~~~-~~~~~-------------------------~~~~~~~~~~~~~s~~~~~~~~~~~-----~~~~g~~~ 229 (396)
++++|+..... +.... .......+..++.+....+...... ........
T Consensus 159 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~ 238 (477)
T d1rzua_ 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRA 238 (477)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTG
T ss_pred EEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhcc
Confidence 89999752110 00000 0011235555555554433221110 00112234
Q ss_pred CCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCC-CCEEEEEEecccCCCCHHHHHHHHHHHHH
Q 016053 230 PDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLE 297 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~-~~~~il~vG~l~~~Kg~~~li~a~~~l~~ 297 (396)
.++.+|+||+|.+.|.|.... .........++...++++ +.++|+++||+.++||++.|++|+.++.+
T Consensus 239 ~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~ 318 (477)
T d1rzua_ 239 HVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS 318 (477)
T ss_dssp GGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH
T ss_pred ccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh
Confidence 679999999999887653221 112334556777778754 46799999999999999999999998765
Q ss_pred HHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHH
Q 016053 298 LIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRIT 375 (396)
Q Consensus 298 ~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~ 375 (396)
.+.+++++|.|. .....++++...++ .++|.+.+.. +++..+|++||++|+||. +|+||+++
T Consensus 319 ---------~~~~l~~~G~G~---~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fglv~ 382 (477)
T d1rzua_ 319 ---------LGGRLVVLGAGD---VALEGALLAAASRH--HGRVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQ 382 (477)
T ss_dssp ---------TTCEEEEEECBC---HHHHHHHHHHHHHT--TTTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHH
T ss_pred ---------hCCeEEEEecCC---chHHHHHHHHHhhc--CCeEEEEcccChhHHHHHHHhCccccCCcc--ccCCCHHH
Confidence 478999999886 22444555555544 4789999876 457779999999999999 89999999
Q ss_pred HHHHhcCCCEEEcCCCCCC
Q 016053 376 IEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 376 lEAma~G~PVI~t~~gG~~ 394 (396)
+||||||+|||+|++||.+
T Consensus 383 lEAma~G~PvVas~~GG~~ 401 (477)
T d1rzua_ 383 LYALRYGCIPVVARTGGLA 401 (477)
T ss_dssp HHHHHHTCEEEEESSHHHH
T ss_pred HHHHHcCCCEEEcCCCCCc
Confidence 9999999999999999853
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.2e-32 Score=255.25 Aligned_cols=280 Identities=15% Similarity=0.099 Sum_probs=189.0
Q ss_pred EEEEec-cCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--------------
Q 016053 77 VLLVSH-ELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-------------- 141 (396)
Q Consensus 77 Il~v~~-~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 141 (396)
|+|+.. +.+.||+++.+.+++++|.++||+|+|++...... . ..++++...+.
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-------C-----PKAFELIQVPVKSHTNHGRNAEYYA 69 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-------C-----CTTCEEEECCCCCSSHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCC-------C-----CCceEEEEcCccccccchhhHHHHH
Confidence 677774 45679999999999999999999999998432211 0 01223322211
Q ss_pred -hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch-----hh---hccccccccceeeccc
Q 016053 142 -QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL-----DY---VKHLPLVAGAMIDSHV 212 (396)
Q Consensus 142 -~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~-----~~---~~~~~~~~~~~~~s~~ 212 (396)
........++|+||.+....+... ........ ...+...+......... .. .......+..+..+..
T Consensus 70 ~~~~~~~~~~~d~v~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (370)
T d2iw1a1 70 WVQNHLKEHPADRVVGFNKMPGLDV--YFAADVCY--AEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDK 145 (370)
T ss_dssp HHHHHHHHSCCSEEEESSCCTTCSE--EECCSCCH--HHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHH
T ss_pred HHHHHHHhcccceeeecccCchHHH--HHHhhccc--ceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEecHH
Confidence 112234578999998764322100 00000000 00000000000000000 00 0011123334444333
Q ss_pred cHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHH
Q 016053 213 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSF 292 (396)
Q Consensus 213 ~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~ 292 (396)
. .+.+.+.++.+..++.++|||+|.+.+.+...+ ..++..|+.+++++++++++++|++.++||++.+++|+
T Consensus 146 ~----~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~----~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~ 217 (370)
T d2iw1a1 146 Q----IADFQKHYQTEPERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEAL 217 (370)
T ss_dssp H----HHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHH
T ss_pred H----HHHHHHhcCCCcceEEEEEeecccccccccCch----hhhhhhhhccCCCccceEEEEEeccccccchhhhcccc
Confidence 3 333444678888899999999998876544322 23577899999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCcc
Q 016053 293 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
+++.+.. ++..+.++|++. ..+.+++++++++..++++|+|+++|+.++|++||++|+||. .|+||
T Consensus 218 ~~l~~~~-------~~~~~~ii~g~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~--~E~~~ 283 (370)
T d2iw1a1 218 ASLPESL-------RHNTLLFVVGQD-----KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEAAG 283 (370)
T ss_dssp HTSCHHH-------HHTEEEEEESSS-----CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCSSC
T ss_pred ccccccc-------ccceeeeccccc-----cccccccccccccccccccccccccccccccccccccccccc--ccccc
Confidence 9886644 456666666554 346788899999999999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCCEEEcCCCCCC
Q 016053 373 RITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 373 ~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++|||+||+|||+|+.||.+
T Consensus 284 ~~~~EAma~G~PvI~s~~~g~~ 305 (370)
T d2iw1a1 284 IVLLEAITAGLPVLTTAVCGYA 305 (370)
T ss_dssp HHHHHHHHHTCCEEEETTSTTT
T ss_pred ceeeecccCCeeEEEeCCCChH
Confidence 9999999999999999999975
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.97 E-value=4.2e-30 Score=246.01 Aligned_cols=298 Identities=15% Similarity=0.075 Sum_probs=193.7
Q ss_pred cEEEEEeccCC---CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh----------hhhhcceEEEEcCc
Q 016053 75 KLVLLVSHELS---LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH----------KMWDRGVQVISAKG 141 (396)
Q Consensus 75 ~kIl~v~~~~~---~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 141 (396)
||||+++..+. .||.++++..|+++|+++||+|+|+++............... .....++.++....
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 80 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCc
Confidence 69999997543 389999999999999999999999995433211111000000 01112233322110
Q ss_pred --h--------------h---------------hhhhccCCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeeccc
Q 016053 142 --Q--------------E---------------TINTALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEMRG 189 (396)
Q Consensus 142 --~--------------~---------------~~~~~~~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~~~ 189 (396)
. + .......||+||+|....+.....+. ..+ .++++++|+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~-----~~~v~~~h~~~~ 155 (437)
T d2bisa1 81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK-----IPAVFTIHRLNK 155 (437)
T ss_dssp SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHC-----CCEEEEESSCCC
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhcccc-----CceeEEEeeccc
Confidence 0 0 00112468999999876554333332 233 458888998642
Q ss_pred ccCchhhh------c------------cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhH
Q 016053 190 HYFKLDYV------K------------HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV 251 (396)
Q Consensus 190 ~~~~~~~~------~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~ 251 (396)
..+..... . .....+.+++.+... .......++....++.+||||+|.+.|.+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~----~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~ 231 (437)
T d2bisa1 156 SKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGY----LIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTG 231 (437)
T ss_dssp CCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHH----HHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCS
T ss_pred cccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhh----hhhhhhhhccccCceEEEecccccccccccccch
Confidence 22111100 0 001122222222222 2222224455678899999999999887654444
Q ss_pred HHHHhHHHHHHHcCCCCCCEEEEEEecccC-CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHH
Q 016053 252 AKRVLREHVRESLGVRNEDLLFAIINSVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 330 (396)
Q Consensus 252 ~~~~~~~~~r~~~g~~~~~~~il~vG~l~~-~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~ 330 (396)
.....+..++++++. .++++|+++|++.. .||++.+++|+..+.+.. +.++++|+++|.+. ......++.
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~-----~~~~~~lvi~G~~~---~~~~~~~~~ 302 (437)
T d2bisa1 232 SRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGKGD---PELEGWARS 302 (437)
T ss_dssp CHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECCBC---HHHHHHHHH
T ss_pred hhHHHHHhhhhhhhc-cCCceEEEeecccccchhHHHHHhhhccccccc-----ccccceeeeecccc---cccccchhh
Confidence 444556778889998 45688999999964 799999999999875422 23789999999986 123334444
Q ss_pred HHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 331 YVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 331 ~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+.+. ..+++.+.|.. +++..++++||++++||. .|++|++++|||+||+|||+|+.||..
T Consensus 303 ~~~~--~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~--~e~~~~~~~Eama~G~Pvi~~~~g~~~ 364 (437)
T d2bisa1 303 LEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 364 (437)
T ss_dssp HHHT--CTTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHTTTCEEEEESCTTHH
T ss_pred hccc--cccceeccccCcHHHHHHHHhhhcccccccc--ccccchHHHHHHHCCCCEEEeCCCCcH
Confidence 4443 33566777764 679999999999999999 999999999999999999999999854
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.87 E-value=3.1e-22 Score=170.11 Aligned_cols=143 Identities=17% Similarity=0.171 Sum_probs=113.3
Q ss_pred CCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEec
Q 016053 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 316 (396)
Q Consensus 238 gid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~ 316 (396)
|||.+.|.+.......+..+..+++++|+ +++.+|+|+||+. ++||++.+++|++.+.+.. .+++++|+++|.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~-----~~~~~~l~i~G~ 74 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGK 74 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECC
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCC-CCCCEEEEEcCCCccccCHHHHHHHHHhhhccc-----CCCCeEEEEEee
Confidence 78999997664444445567889999999 5777899999996 5899999999999885422 237899999998
Q ss_pred CCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 317 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 317 g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
|. +.+....+.+.+++ .+.+.+.|.. +++..+|+.||++|+||. .|+||.+++|||+||+|||+++.||.
T Consensus 75 g~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~~G~pvI~~~~~~~ 146 (196)
T d2bfwa1 75 GD---PELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGL 146 (196)
T ss_dssp BC---HHHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHH
T ss_pred cc---cchhhhhhhhhhcc--ceeEEeeeccccccchhccccccccccccc--cccccccchhhhhcCceeeecCCCcc
Confidence 75 22344444454444 3456666665 689999999999999999 99999999999999999999998764
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=6.7e-19 Score=168.08 Aligned_cols=235 Identities=11% Similarity=0.008 Sum_probs=152.2
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc--C-----chhhhccccccccceeeccccHHHHHHHH
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--F-----KLDYVKHLPLVAGAMIDSHVTAEYWKNRT 221 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~--~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (396)
..-|+|++|+.........+.+.+ |. .++.++.|...... + .......+..++.+...+......+.+..
T Consensus 121 ~~~d~iwvhDyhl~llp~~lR~~~-~~--~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~ 197 (456)
T d1uqta_ 121 QDDDIIWIHDYHLLPFAHELRKRG-VN--NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCL 197 (456)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTT-CC--SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred cCCCeEEEeccchhhhHHHHHHhC-CC--CcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHH
Confidence 445999999976555544444443 32 45777778652111 0 01111222233433333333333333222
Q ss_pred Hhhhcc------------cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 222 RERLRI------------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 222 ~~~~g~------------~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
....+. ...++.++|+|+|.+.|........ .....+++.++ .++++|+++||+.+.||++.++
T Consensus 198 ~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~-~~~~~~l~~~~---~~~~~il~V~Rld~~KGi~~~l 273 (456)
T d1uqta_ 198 SNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPL-PPKLAQLKAEL---KNVQNIFSVERLDYSKGLPERF 273 (456)
T ss_dssp HHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCC-CHHHHHHHHHT---TTCEEEEEECCBCGGGCHHHHH
T ss_pred HHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHH-HHHHHHHHHhc---CCCeEEEEeCCCchhhchHHHH
Confidence 222121 1235788999999998865432221 11234455555 4778999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHH----HHHHHHHH-------hcCCCCcEEEecCc--CCHHHHHHH
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFE----SELRNYVM-------QKKIQDRVHFVNKT--LTVAPYLAA 356 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~----~~l~~~~~-------~~~l~~~V~~~g~~--~~~~~~~~~ 356 (396)
+|++++.+..++. ..++.|+++|.+...+.... .++.+++. ..+..+.+.+.+.. +++..+|+.
T Consensus 274 ~A~~~~l~~~p~~---~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~ 350 (456)
T d1uqta_ 274 LAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 350 (456)
T ss_dssp HHHHHHHHHCGGG---TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCccc---cccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhh
Confidence 9999998765542 13578888887764443222 23333332 34666778888875 789999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcCCC-----EEEcCCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQLP-----VLVLSELHPSI 395 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G~P-----VI~t~~gG~~~ 395 (396)
||++++||. .||||++++||||||+| +|+|+.+|++.
T Consensus 351 Adv~v~~s~--~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~ 392 (456)
T d1uqta_ 351 SDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 392 (456)
T ss_dssp CSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG
T ss_pred hceeecCCc--cCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHH
Confidence 999999999 99999999999999999 99999999864
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.79 E-value=1.3e-19 Score=149.35 Aligned_cols=109 Identities=22% Similarity=0.258 Sum_probs=90.9
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc-
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 347 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~- 347 (396)
+++ ++|+||+.++||++.+++|++++ ++.+++|+|.+..++ ..+.+.+.+.+.. .++|+|+|++
T Consensus 12 ~~~-~l~iGrl~~~K~~~~~i~a~~~l-----------~~~~l~ivg~~~~~~--~~~~~~~~~~~~~-~~~v~~~g~~~ 76 (166)
T d2f9fa1 12 GDF-WLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSKGD--HAERYARKIMKIA-PDNVKFLGSVS 76 (166)
T ss_dssp CSC-EEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCTTS--THHHHHHHHHHHS-CTTEEEEESCC
T ss_pred CCE-EEEEecCccccCHHHHHHHHHHh-----------cCCeEEEEEeccccc--chhhhhhhhcccc-cCcEEEeeccc
Confidence 444 77999999999999999999875 578999999876432 3444555555443 4689999997
Q ss_pred -CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 348 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 348 -~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+++.++|+.||++|+||. .|+||++++|||++|+|||+++.+|..
T Consensus 77 ~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~ 122 (166)
T d2f9fa1 77 EEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFK 122 (166)
T ss_dssp HHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHH
T ss_pred ccccccccccccccccccc--cccccccccccccccccceeecCCcce
Confidence 679999999999999999 999999999999999999999988753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=6.2e-08 Score=87.57 Aligned_cols=252 Identities=16% Similarity=0.115 Sum_probs=128.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 142 (396)
|||++.+. ..||.-.....++++|+++||+|.+++..... ....+...++.+...+..
T Consensus 1 kkili~~~--GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (351)
T d1f0ka_ 1 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--------EADLVPKHGIEIDFIRISGLRGKGIKALIA 70 (351)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--------HHHHGGGGTCEEEECCCCCCTTCCHHHHHT
T ss_pred CEEEEEcC--CcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcc--------hhhcccccCCcEEEEECCCcCCCCHHHHHH
Confidence 58988763 23466677899999999999999998854321 112233344444322210
Q ss_pred ------------hhhhhccCCcEEEEcCchh-hHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 143 ------------ETINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 143 ------------~~~~~~~~~DiV~~~~~~~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
..+....++|++.+..... ......+...++| ++...++.. .. ...+........+..
T Consensus 71 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip-----~~~~~~~~~---~~-~~~~~~~~~~~~~~~ 141 (351)
T d1f0ka_ 71 APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-----VVLHEQNGI---AG-LTNKWLAKIATKVMQ 141 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-----EEEEECSSS---CC-HHHHHHTTTCSEEEE
T ss_pred HHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccc-----eeecccccc---cc-hhHHHhhhhcceeec
Confidence 1223458899998765432 2233344445554 333333221 11 111111111111111
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL 289 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li 289 (396)
.. .........+.++.......... .+.+.....++..++.+|.-. |-..+.
T Consensus 142 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~~~gs~---g~~~~~ 193 (351)
T d1f0ka_ 142 AF--------------PGAFPNAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQ---GARILN 193 (351)
T ss_dssp SS--------------TTSSSSCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTT---CCHHHH
T ss_pred cc--------------cccccceeEEcCCcccccccchh-----------HHhhhhcccCCcccccccccc---hhhhhH
Confidence 00 00112233444444333222111 122333445666666655422 333333
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCC
Q 016053 290 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGE 369 (396)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E 369 (396)
+.+.+....+.. ....++++... ........... ....++...++.+++.++++.||++|. -
T Consensus 194 ~~~~~~~~~l~~------~~~~i~~~~~~----~~~~~~~~~~~--~~~~~~~v~~f~~~~~~lm~~adl~It------~ 255 (351)
T d1f0ka_ 194 QTMPQVAAKLGD------SVTIWHQSGKG----SQQSVEQAYAE--AGQPQHKVTEFIDDMAAAYAWADVVVC------R 255 (351)
T ss_dssp HHHHHHHHHHGG------GEEEEEECCTT----CHHHHHHHHHH--TTCTTSEEESCCSCHHHHHHHCSEEEE------C
T ss_pred HHHHHhhhhhcc------cceeeeecccc----chhhhhhhhcc--cccccceeeeehhhHHHHHHhCchhhc------c
Confidence 444433333322 34444455432 12222222233 233678888999999999999999994 3
Q ss_pred CccHHHHHHHhcCCCEEEcCCC
Q 016053 370 CFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 370 ~fg~~~lEAma~G~PVI~t~~g 391 (396)
+-+.++.||+++|+|+|....+
T Consensus 256 ~G~~T~~Eal~~g~P~I~iP~~ 277 (351)
T d1f0ka_ 256 SGALTVSEIAAAGLPALFVPFQ 277 (351)
T ss_dssp CCHHHHHHHHHHTCCEEECCCC
T ss_pred ccchHHHHHHHhCCceeeeecc
Confidence 4468899999999999987643
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.72 E-value=7.9e-08 Score=88.35 Aligned_cols=50 Identities=10% Similarity=0.125 Sum_probs=42.0
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.+++||++.++. +..+++..+|++| ..|...++.||+++|+|+|+....+
T Consensus 283 ~~~~~v~~~~~~-p~~~ll~~~~~~I------~hgG~~t~~Eal~~GvP~l~~P~~~ 332 (401)
T d1rrva_ 283 DDRDDCFAIDEV-NFQALFRRVAAVI------HHGSAGTEHVATRAGVPQLVIPRNT 332 (401)
T ss_dssp CCCTTEEEESSC-CHHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSB
T ss_pred cCCCCEEEEecc-CcHHHhhhccEEE------ecCCchHHHHHHHhCCCEEEecccc
Confidence 456899999997 4678899999999 4666799999999999999977654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.52 E-value=9.9e-07 Score=80.43 Aligned_cols=50 Identities=12% Similarity=0.219 Sum_probs=41.6
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
...+++.+.++. +..+++..+|++|..+- .+++.|||++|+|+|+....+
T Consensus 267 ~~~~~v~i~~~~-p~~~ll~~a~~~v~hgG------~~t~~Eal~~G~P~v~~P~~~ 316 (391)
T d1pn3a_ 267 DDGADCFVVGEV-NLQELFGRVAAAIHHDS------AGTTLLAMRAGIPQIVVRRVV 316 (391)
T ss_dssp SCCTTCCEESSC-CHHHHHTTSSCEEEESC------HHHHHHHHHHTCCEEEECSSC
T ss_pred cCCCCEEEeccc-CHHHHHhhccEEEecCc------hHHHHHHHHhCCcEEEecccc
Confidence 345789999998 47789999999996544 478999999999999987665
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.30 E-value=1.3e-05 Score=72.86 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=41.5
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..++||++.++.+ ..++|..+|++| ..|..+++.||+++|+|+|+....
T Consensus 282 ~~~~nv~~~~~~p-~~~~l~~~~~~V------~hgG~~t~~Eal~~GvP~v~~P~~ 330 (401)
T d1iira_ 282 DDGADCFAIGEVN-HQVLFGRVAAVI------HHGGAGTTHVAARAGAPQILLPQM 330 (401)
T ss_dssp SCGGGEEECSSCC-HHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCS
T ss_pred cCCCCEEEEeccC-HHHHHhhcCEEE------ecCCchHHHHHHHhCCCEEEcccc
Confidence 3567999999984 678999999999 567789999999999999997654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.24 E-value=4.3e-06 Score=76.16 Aligned_cols=269 Identities=15% Similarity=0.110 Sum_probs=144.0
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEE---EEc---C-c----
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV---ISA---K-G---- 141 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~-~---- 141 (396)
||||+++...-+-- -.+..+.++|++ .++++.++..+...+ . ..+.+...|+.. +.. . .
T Consensus 2 MkkI~~v~GtR~e~---~kl~pli~~l~~~~~~~~~li~tG~H~~--~----~~~~~~~~~i~~d~~l~~~~~~~s~~~~ 72 (373)
T d1v4va_ 2 MKRVVLAFGTRPEA---TKMAPVYLALRGIPGLKPLVLLTGQHRE--Q----LRQALSLFGIQEDRNLDVMQERQALPDL 72 (373)
T ss_dssp CEEEEEEECSHHHH---HHHHHHHHHHHTSTTEEEEEEECSSCHH--H----HHHHHHTTTCCCSEECCCCSSCCCHHHH
T ss_pred CCeEEEEEEhhHHH---HHHHHHHHHHHhCCCCCEEEEEccCChh--h----hhCcchhcCCCccccCCCCCCCCCHHHH
Confidence 35899998321111 467778899987 579999887543311 1 111122223221 111 0 0
Q ss_pred -------hhhhhhccCCcEEEEcCch-hhH-HHHHHHhcCCCccccceeeeeee-ccc-cc---Cchhhhcc-cc-cccc
Q 016053 142 -------QETINTALKADLIVLNTAV-AGK-WLDAVLKEDVPRVLPNVLWWIHE-MRG-HY---FKLDYVKH-LP-LVAG 205 (396)
Q Consensus 142 -------~~~~~~~~~~DiV~~~~~~-~~~-~~~~~~~~~~~~~~~~vv~~~h~-~~~-~~---~~~~~~~~-~~-~~~~ 205 (396)
...+....+||+|+++.-. ... ....+...++| ++ +++. .++ .. +.....+. .. ..+.
T Consensus 73 ~~~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ip-----i~-HiegG~rsg~~~~~~~de~~R~~iskls~~ 146 (373)
T d1v4va_ 73 AARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-----VG-HVEAGLRSGNLKEPFPEEANRRLTDVLTDL 146 (373)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-----EE-EETCCCCCSCTTSSTTHHHHHHHHHHHCSE
T ss_pred HHHHHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhh-----he-eecccccccccccCcchhhhhhhhccccce
Confidence 1133345899999988732 222 22234445655 22 2332 111 11 11122221 11 2233
Q ss_pred ceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCH
Q 016053 206 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQ 285 (396)
Q Consensus 206 ~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~ 285 (396)
.++.+....+ ++. +.|.++.++.++.+.. .+.+... ....+.....+.+++.++..-+....++.
T Consensus 147 hf~~t~~~~~----~L~-~~Ge~~~~I~~vG~p~-~D~i~~~---------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~ 211 (373)
T d1v4va_ 147 DFAPTPLAKA----NLL-KEGKREEGILVTGQTG-VDAVLLA---------AKLGRLPEGLPEGPYVTVTMHRRENWPLL 211 (373)
T ss_dssp EEESSHHHHH----HHH-TTTCCGGGEEECCCHH-HHHHHHH---------HHHCCCCTTCCSSCEEEECCCCGGGGGGH
T ss_pred eeecchhhhh----hhh-hhcccccceeecccch-hhHHHhh---------hhhcccccccccccceeEEeccccccchH
Confidence 3333333333 333 5688888888877542 1111100 01111223345677888888877777777
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 286 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 286 ~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
..+.+++..+.+.. .++.+++..... ......+.+. ....+++.++... .+...++..|++++--
T Consensus 212 ~~~~~~~~~~~~~~-------~~~~~i~p~~~~---~~~~~~~~~~---~~~~~n~~~~~~l~~~~~l~ll~~s~~vign 278 (373)
T d1v4va_ 212 SDLAQALKRVAEAF-------PHLTFVYPVHLN---PVVREAVFPV---LKGVRNFVLLDPLEYGSMAALMRASLLLVTD 278 (373)
T ss_dssp HHHHHHHHHHHHHC-------TTSEEEEECCSC---HHHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHHHhhhc-------ccceeeeeeccc---ccchhhhhhh---hcccccceeeccchHHHHHHHhhhceeEecc
Confidence 78888887765532 566666554332 1122333333 3334689998875 6778889999999865
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
|. ..+.||..+|+|+|.-..-|
T Consensus 279 Ss-------sgi~Ea~~lg~P~Inir~~~ 300 (373)
T d1v4va_ 279 SG-------GLQEEGAALGVPVVVLRNVT 300 (373)
T ss_dssp CH-------HHHHHHHHTTCCEEECSSSC
T ss_pred cc-------hhhhcchhhcCcEEEeCCCc
Confidence 54 66789999999999875433
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.46 E-value=0.00086 Score=60.49 Aligned_cols=268 Identities=12% Similarity=0.118 Sum_probs=126.5
Q ss_pred cccEEEEEeccCCCCChH-HHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEE-EEc--Cc------
Q 016053 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISA--KG------ 141 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~------ 141 (396)
++|||++|+..- .+ -.+..+.++|++. ++++.++..+.... . ........++.. +.. ..
T Consensus 1 ~k~Ki~~v~GtR----~e~~kl~pli~~l~~~~~~~~~li~tG~H~~---~---~~~~~~~~~i~~~~~~~~~~~~~~~~ 70 (377)
T d1o6ca_ 1 KKLKVMTVFGTR----PEAIKMAPLVLELKKYPEIDSYVTVTAQHRQ---M---LDQVLDAFHIKPDFDLNIMKERQTLA 70 (377)
T ss_dssp CCEEEEEEECSH----HHHHHHHHHHHHGGGCTTEEEEEEECCSCGG---G---THHHHHHTTCCCSEECCCCCTTCCHH
T ss_pred CCceEEEEEEch----HhHHHHHHHHHHHHhCCCCCEEEEEeCCCHH---H---HHHHHhhcCCCCceeeecCCCCCCHH
Confidence 467899998321 11 4667788998875 68999888543321 1 111112222211 111 10
Q ss_pred ---------hhhhhhccCCcEEEEcCch-hh-HHHHHHHhcCCCccccceeeeeee-cccc-c---Cchhhhc-cc-ccc
Q 016053 142 ---------QETINTALKADLIVLNTAV-AG-KWLDAVLKEDVPRVLPNVLWWIHE-MRGH-Y---FKLDYVK-HL-PLV 203 (396)
Q Consensus 142 ---------~~~~~~~~~~DiV~~~~~~-~~-~~~~~~~~~~~~~~~~~vv~~~h~-~~~~-~---~~~~~~~-~~-~~~ 203 (396)
...+....+||+|++++-. .. .....+...++| ++ ++|. .++. . +.....+ .. +..
T Consensus 71 ~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ip-----i~-HiegG~~s~~~~~~~~de~~R~~iskls 144 (377)
T d1o6ca_ 71 EITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIA-----VG-HVEAGLRTGNKYSPFPEELNRQMTGAIA 144 (377)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-----EE-EESCCCCCSCTTTTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccce-----EE-EEecccccccccccCchhhhccccccce
Confidence 0133345899999998732 22 222344555655 32 2332 1111 1 1122222 22 233
Q ss_pred ccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHc-CCCCCCEEEEEEecccCC
Q 016053 204 AGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL-GVRNEDLLFAIINSVSRG 282 (396)
Q Consensus 204 ~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~-g~~~~~~~il~vG~l~~~ 282 (396)
+..++.+....+.+. +.|.++.++.++.+..-. .+..... +......+ ....++++++..-+....
T Consensus 145 ~~hf~~t~~~~~~L~-----~~G~~~~~I~~vG~~~~D-~i~~~~~-------~~~~~~~~~~~~~~~~ilvt~Hr~~~~ 211 (377)
T d1o6ca_ 145 DLHFAPTGQAKDNLL-----KENKKADSIFVTGNTAID-ALNTTVR-------DGYSHPVLDQVGEDKMILLTAHRRENL 211 (377)
T ss_dssp SEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHH-HHHHHCC-------SSCCCSTTTTTTTSEEEEECC------
T ss_pred eEEeecchhhhhhhh-----hhccccceEeeccchhHH-HHHHHHH-------HHHhhhhhhhccCCceEEEEecccccc
Confidence 333333333333333 568888888888765211 1111000 00000011 112345556555554332
Q ss_pred -CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH-HhcCCCCcEEEecCc--CCHHHHHHHcC
Q 016053 283 -KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV-MQKKIQDRVHFVNKT--LTVAPYLAAID 358 (396)
Q Consensus 283 -Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~-~~~~l~~~V~~~g~~--~~~~~~~~~aD 358 (396)
+.....+.++..+.. + ..+..+++..... ....... +.....++|.++... .+...++..|+
T Consensus 212 ~~~~~~~~~~~~~~~~---~----~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~ 277 (377)
T d1o6ca_ 212 GEPMENMFKAIRRIVG---E----FEDVQVVYPVHLN-------PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSH 277 (377)
T ss_dssp ----HHHHHHHHHHHH---H----CTTEEEEEC-----------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCS
T ss_pred ccchHHHHHHHHhhcc---c----ccccccccccccc-------cccchhhhhccccccceEeccccchHHHHHHHhhhh
Confidence 223334444443332 2 2455555443321 1222222 233455789999986 67888999999
Q ss_pred EEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 359 VLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 359 v~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
+++--|- ..+.||-.+|+|+|.-..
T Consensus 278 ~vIgnSs-------s~i~Ea~~lg~P~Inir~ 302 (377)
T d1o6ca_ 278 FILTDSG-------GVQEEAPSLGKPVLVLRD 302 (377)
T ss_dssp EEEEC---------CHHHHGGGGTCCEEEECS
T ss_pred eeecccc-------hhHHhhhhhhceEEEeCC
Confidence 9995444 347799999999997643
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.0045 Score=55.55 Aligned_cols=272 Identities=12% Similarity=0.085 Sum_probs=133.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEE---EEc--C--c-----
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV---ISA--K--G----- 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--~----- 141 (396)
|||++|+..-+-- -.+..+.++|++. ++++.++......+ . ..+.+...++.. +.. . .
T Consensus 1 MKi~~v~GtR~e~---~kl~pli~~l~~~~~~~~~li~tG~H~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (376)
T d1f6da_ 1 MKVLTVFGTRPEA---IKMAPLVHALAKDPFFEAKVCVTAQHRE---M---LDQVLKLFSIVPDYDLNIMQPGQGLTEIT 71 (376)
T ss_dssp CEEEEEECSHHHH---HHHHHHHHHHHHCTTCEEEEEECCTTGG---G---GHHHHHHTTCCCSEECCCCSSSSCHHHHH
T ss_pred CeEEEEEEhhHhH---HHHHHHHHHHHhCCCCCEEEEEcCCCHH---H---HHHHHHhcCCCCCcccccCCCCCCHHHHH
Confidence 5799998321111 4677788888775 69999988543321 1 111122222211 111 0 0
Q ss_pred ------hhhhhhccCCcEEEEcCch-hhH-HHHHHHhcCCCccccceeeeeeec-ccc-c---Cchhhhcc-cc-ccccc
Q 016053 142 ------QETINTALKADLIVLNTAV-AGK-WLDAVLKEDVPRVLPNVLWWIHEM-RGH-Y---FKLDYVKH-LP-LVAGA 206 (396)
Q Consensus 142 ------~~~~~~~~~~DiV~~~~~~-~~~-~~~~~~~~~~~~~~~~vv~~~h~~-~~~-~---~~~~~~~~-~~-~~~~~ 206 (396)
...+....+||+|.++.-- ... ....+...++| ++ ++|.- ++. . +.....++ .. ..+..
T Consensus 72 ~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ip-----i~-HiegG~~s~~~~~~~pde~~R~~iskls~~h 145 (376)
T d1f6da_ 72 CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-----VG-HVEAGLRTGDLYSPWPEEANRTLTGHLAMYH 145 (376)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-----EE-EESCCCCCSCTTSSTTHHHHHHHHHHTCSEE
T ss_pred HHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCce-----EE-EEecccccccccccCchhhhhhhhccceeEE
Confidence 1123345899999988732 222 22234455655 22 33331 111 1 11222222 21 22333
Q ss_pred eeeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhh-hhhHHHH-HhHHHHHHHcCCCC-CCEEEEEEeccc-C
Q 016053 207 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVA-EDNVAKR-VLREHVRESLGVRN-EDLLFAIINSVS-R 281 (396)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~-~~~~~~~-~~~~~~r~~~g~~~-~~~~il~vG~l~-~ 281 (396)
++.+....+ ++. +.|.++.++.++.+.. |. +... ....... ..+....+...... ++++++..=+.. .
T Consensus 146 f~~~~~~~~----~L~-~~G~~~~~I~~vG~~~~D~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~ 218 (376)
T d1f6da_ 146 FSPTETSRQ----NLL-RENVADSRIFITGNTVIDA--LLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESF 218 (376)
T ss_dssp EESSHHHHH----HHH-HTTCCGGGEEECCCHHHHH--HHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSC
T ss_pred EeccHHHHh----HHH-hcCCCccccceecCchHHH--HHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhh
Confidence 333333333 333 6688888888887542 32 1100 0000000 01112222222333 344444433333 2
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCE
Q 016053 282 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDV 359 (396)
Q Consensus 282 ~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv 359 (396)
.+....++.++..+.+. ..++.+++--... ........+. .+..+++.++... .+...++..|++
T Consensus 219 ~~~~~~i~~~l~~~~~~-------~~~~~ii~p~~~~---~~~~~~~~~~---~~~~~ni~~~~~l~~~~fl~ll~~a~~ 285 (376)
T d1f6da_ 219 GRGFEEICHALADIATT-------HQDIQIVYPVHLN---PNVREPVNRI---LGHVKNVILIDPQEYLPFVWLMNHAWL 285 (376)
T ss_dssp CHHHHHHHHHHHHHHHH-------CTTEEEEEECCBC---HHHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred hhhHHHHHHHHhhhhhh-------cceeEEecccccc---hhhhhhHhhh---hcccccceeeccccHHHHHHHHhhceE
Confidence 34455666666655431 2466666554322 1122223222 2344689998875 567788999999
Q ss_pred EEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 360 LVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 360 ~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
++--|. ..+.||-.+|+|+|.-
T Consensus 286 vignSs-------sgi~Ea~~lg~P~Ini 307 (376)
T d1f6da_ 286 ILTDSG-------GIQEEAPSLGKPVLVM 307 (376)
T ss_dssp EEESSS-------GGGGTGGGGTCCEEEC
T ss_pred EEecCc-------chHhhHHHhCCCEEEc
Confidence 997665 4567999999999964
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.0015 Score=57.77 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=69.5
Q ss_pred HHHHHHHcCCCCCCEEEEEE-e-cccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH
Q 016053 257 REHVRESLGVRNEDLLFAII-N-SVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 332 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~v-G-~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~ 332 (396)
+....+.++...++..|++. | +-...|.+ +.+++.+..+.+ .+.+++++|... +.+..++..
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------~~~~ivl~g~~~-----e~~~~~~~~ 232 (348)
T d1pswa_ 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------cCCccccccccc-----hHHHHHHHH
Confidence 45567778876666555444 3 22234553 345555555543 367788888643 333333333
Q ss_pred HhcC---CCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 333 MQKK---IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 333 ~~~~---l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+... ...-+.+.|.. .|+..+++.||++|-+.. ..+--|.|+|+|+|+-=
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt-------g~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVALY 287 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-------HHHHHHHHTTCCEEEEE
T ss_pred HhhhcccccccccccCCccHHHHHHHHhcceeEeecCc-------cHHHHHHHcCCCEEEEE
Confidence 3221 11234455653 788999999999998766 56689999999999864
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.28 E-value=0.0076 Score=54.84 Aligned_cols=48 Identities=19% Similarity=0.157 Sum_probs=33.6
Q ss_pred CcEEEecCcCC-HHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 339 DRVHFVNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 339 ~~V~~~g~~~~-~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++.+...... -...+..+|+|| .-|-..++.||+++|+|+|+....+
T Consensus 330 ~n~~v~~~~pq~~~l~~p~~~~fI------tHGG~gs~~eAl~~GVP~l~~P~~~ 378 (461)
T d2acva1 330 GKGMICGWAPQVEVLAHKAIGGFV------SHCGWNSILESMWFGVPILTWPIYA 378 (461)
T ss_dssp CSEEEESSCCHHHHHHSTTEEEEE------ECCCHHHHHHHHHTTCCEEECCCST
T ss_pred CCeEEEecCCHHHHHhcccCCEEE------ecCCccHHHHHHHcCCCEEeCCccc
Confidence 55666655421 122457889999 4556688999999999999976543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=96.28 E-value=0.27 Score=44.02 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=36.5
Q ss_pred CcEEEecCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 339 DRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+||.+..+.. ..+++ .++++|| .-|-..++.||+.+|+|+|+....+
T Consensus 346 ~Nv~~~~~~P-q~~lL~hp~~~~fI------tHGG~~s~~Eal~~GVP~lv~P~~~ 394 (473)
T d2pq6a1 346 DRGLIASWCP-QDKVLNHPSIGGFL------THCGWNSTTESICAGVPMLCWPFFA 394 (473)
T ss_dssp TTEEEESCCC-HHHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CceEEeeeCC-HHHHhcCCcCcEEE------ecCCccHHHHHHHcCCCEEeccchh
Confidence 6898888864 35567 5778888 4455688999999999999987643
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.06 Score=52.16 Aligned_cols=126 Identities=13% Similarity=-0.008 Sum_probs=91.4
Q ss_pred CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhc-cCCCCEEEEEEecCCCccchHHHHHH---HHHHhc----CC
Q 016053 266 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK-LEVPSVHAVIIGSDMNAQTKFESELR---NYVMQK----KI 337 (396)
Q Consensus 266 ~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~-~~~~~~~l~ivG~g~~~~~~~~~~l~---~~~~~~----~l 337 (396)
++++.+.++++-|+..+|..+.++.-...+...++++- ....+.++++.|...+++..-.+-++ +.++.. .+
T Consensus 522 ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~ 601 (796)
T d1l5wa_ 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLV 601 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred cChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhh
Confidence 57899999999999999999997766666655665430 01125889999998877653333322 222211 11
Q ss_pred C--CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 338 Q--DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 338 ~--~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
. .+|.|+..- +-...++..|||-+..+..-.|..|..-+-||.-|.+.+++--|
T Consensus 602 ~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDG 659 (796)
T d1l5wa_ 602 GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp GGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred ccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccc
Confidence 1 278888753 44667789999999988866899999999999999999998665
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=96.02 E-value=0.16 Score=45.52 Aligned_cols=47 Identities=19% Similarity=0.111 Sum_probs=35.4
Q ss_pred CcEEEecCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 339 DRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+|+.+..+... .+++ ..+|+|| .-|-..++.||+.+|+|+|+....+
T Consensus 319 ~nv~~~~~~pq-~~lL~hp~~~~fI------tHGG~~s~~eal~~GvP~v~~P~~~ 367 (450)
T d2c1xa1 319 GYGMVVPWAPQ-AEVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFG 367 (450)
T ss_dssp TTEEEESCCCH-HHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCST
T ss_pred ccccccccCCh-HhhhccCceeEEE------ccCCccHHHHHHHcCCCEEeccccc
Confidence 67888877643 3566 6678888 3455678999999999999987654
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.60 E-value=0.18 Score=48.76 Aligned_cols=126 Identities=16% Similarity=0.045 Sum_probs=88.3
Q ss_pred CCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHHHHHHHHhc----C---
Q 016053 265 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK----K--- 336 (396)
Q Consensus 265 g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~----~--- 336 (396)
.++++.+.++++-|+..+|.+...+.-.-.+.+++++. .....+..+++.|...+++..-.+ +.+++.+. +
T Consensus 545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~-iIk~I~~va~~in~dp 623 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKM-IIKLITAIGDVVNHDP 623 (824)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHH-HHHHHHHHHHHHTTCT
T ss_pred CCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHH-HHHHHHHHHHHHhcCh
Confidence 36789999999999999999998444332222333332 012246899999988877653333 33333221 1
Q ss_pred -CC--CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 337 -IQ--DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 337 -l~--~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+. .+|.|+..- .-...++.+|||-.+.|..-.|..|..-+-+|.-|.+.++|--|
T Consensus 624 ~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDG 683 (824)
T d2gj4a1 624 VVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp TTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred hhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccc
Confidence 11 268888753 45667899999999988866899999999999999999998655
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.76 E-value=1.3 Score=39.28 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=37.4
Q ss_pred CCCcEEEecCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 337 IQDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 337 l~~~V~~~g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++||.+.++... .+++ .++++|| .-|-.+++.||+.+|+|+|+...-|
T Consensus 332 ~~~nv~~~~w~Pq-~~lL~hp~~~~fV------tHGG~gS~~EAl~~GvP~v~~P~~~ 382 (471)
T d2vcha1 332 KKRGFVIPFWAPQ-AQVLAHPSTGGFL------THCGWNSTLESVVSGIPLIAWPLYA 382 (471)
T ss_dssp TTTEEEEESCCCH-HHHHHSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCST
T ss_pred cCCCeeecccCCH-HHHhcCccCCEEE------ecCCccHHHHHHHcCCCEEEccccc
Confidence 3478999998744 4577 4677888 3455678899999999999976543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.27 E-value=0.15 Score=34.78 Aligned_cols=83 Identities=16% Similarity=0.201 Sum_probs=55.4
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (396)
|||-|+ ..|| .-+..||+.|.++|++|+-.-.... +..+.+...|++++.-.....+ .++|+|
T Consensus 2 ~~ihfi----GIgG--~GMs~LA~~L~~~G~~VsGSD~~~~--------~~t~~L~~~Gi~i~~gh~~~~i---~~~d~v 64 (89)
T d1j6ua1 2 MKIHFV----GIGG--IGMSAVALHEFSNGNDVYGSNIEET--------ERTAYLRKLGIPIFVPHSADNW---YDPDLV 64 (89)
T ss_dssp CEEEEE----TTTS--HHHHHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCCEESSCCTTSC---CCCSEE
T ss_pred cEEEEE----eECH--HHHHHHHHHHHhCCCeEEEEeCCCC--------hhHHHHHHCCCeEEeeeccccc---CCCCEE
Confidence 467666 3466 3455689999999999987742221 2455677888887643332222 478999
Q ss_pred EEcCc--hhhHHHHHHHhcCCC
Q 016053 155 VLNTA--VAGKWLDAVLKEDVP 174 (396)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~~ 174 (396)
+.... .....+..+++.++|
T Consensus 65 V~SsAI~~~npel~~A~~~gIp 86 (89)
T d1j6ua1 65 IKTPAVRDDNPEIVRARMERVP 86 (89)
T ss_dssp EECTTCCTTCHHHHHHHHTTCC
T ss_pred EEecCcCCCCHHHHHHHHcCCC
Confidence 88873 445677788888876
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=93.65 E-value=0.26 Score=33.99 Aligned_cols=85 Identities=15% Similarity=0.249 Sum_probs=56.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
.++|.|+. .||. -+..||+.|.++||+|+-.-.... +..+.+...|+.++.-.....+ .++|+
T Consensus 8 ~~~ihfiG----igG~--GMs~LA~~L~~~G~~VsGSD~~~~--------~~~~~L~~~Gi~v~~g~~~~~i---~~~d~ 70 (96)
T d1p3da1 8 VQQIHFIG----IGGA--GMSGIAEILLNEGYQISGSDIADG--------VVTQRLAQAGAKIYIGHAEEHI---EGASV 70 (96)
T ss_dssp CCEEEEET----TTST--THHHHHHHHHHHTCEEEEEESCCS--------HHHHHHHHTTCEEEESCCGGGG---TTCSE
T ss_pred CCEEEEEE----ECHH--HHHHHHHHHHhCCCEEEEEeCCCC--------hhhhHHHHCCCeEEECCccccC---CCCCE
Confidence 35787775 2443 345679999999999987642211 2445566778888765554443 46899
Q ss_pred EEEcCc--hhhHHHHHHHhcCCCc
Q 016053 154 IVLNTA--VAGKWLDAVLKEDVPR 175 (396)
Q Consensus 154 V~~~~~--~~~~~~~~~~~~~~~~ 175 (396)
|+.... ....-+..+++.++|.
T Consensus 71 vV~S~AI~~~npel~~A~~~gipi 94 (96)
T d1p3da1 71 VVVSSAIKDDNPELVTSKQKRIPV 94 (96)
T ss_dssp EEECTTSCTTCHHHHHHHHTTCCE
T ss_pred EEECCCcCCCCHHHHHHHHcCCCE
Confidence 988773 4456667788888763
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.01 E-value=0.86 Score=32.54 Aligned_cols=76 Identities=8% Similarity=0.063 Sum_probs=47.0
Q ss_pred ccEEEEEeccCCC--CChH--HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE--Ec--Cchhhh
Q 016053 74 SKLVLLVSHELSL--SGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SA--KGQETI 145 (396)
Q Consensus 74 ~~kIl~v~~~~~~--gG~~--~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 145 (396)
.+|||++...... -|+| ....+.+++|++.|+++.++.+.... ....... .-+++ ++ .....+
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeT--------Vstd~d~-aD~lYfeplt~e~v~~I 74 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPET--------VSTDYDT-SDRLYFEPVTLEDVLEI 74 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTS--------STTSTTS-SSEEECCCCSHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhh--------hhcChhh-cCceEEccCCHHHHHHH
Confidence 4689999876443 3334 67788999999999999999754321 1111111 11111 11 123455
Q ss_pred hhccCCcEEEEcC
Q 016053 146 NTALKADLIVLNT 158 (396)
Q Consensus 146 ~~~~~~DiV~~~~ 158 (396)
...++||.|+...
T Consensus 75 i~~E~p~~ii~~~ 87 (121)
T d1a9xa4 75 VRIEKPKGVIVQY 87 (121)
T ss_dssp HHHHCCSEEECSS
T ss_pred HHHhCCCEEEeeh
Confidence 6779999998875
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.00 E-value=0.96 Score=32.43 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=43.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC--CCCchhhhhhhhhhhhhcceEEEEcCc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISAKG 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (396)
+++++|. || ..-.++|..|++.|.+|+++..+. +..+......+.+.+...|++++....
T Consensus 21 ~~vvIIG-----gG--~iG~E~A~~l~~lG~~Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~i~~~~~ 82 (122)
T d1h6va2 21 GKTLVVG-----AS--YVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFV 82 (122)
T ss_dssp CSEEEEC-----CS--HHHHHHHHHHHHTTCCEEEEESSSSSTTSCHHHHHHHHHHHHHTTEEEEESCE
T ss_pred CeEEEEC-----CC--ccHHHHHHHHhhcCCeEEEEEechhhccCCHHHHHHHHHHHHHCCCEEEECCE
Confidence 4677775 44 688899999999999999997432 234445555667778888888866543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.93 E-value=1.1 Score=35.10 Aligned_cols=35 Identities=11% Similarity=-0.002 Sum_probs=26.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|.++||+++. |....=..+++.|.++||+|++++.
T Consensus 1 m~~kkIlV~G------atG~iG~~v~~~Ll~~g~~V~~~~R 35 (205)
T d1hdoa_ 1 MAVKKIAIFG------ATGQTGLTTLAQAVQAGYEVTVLVR 35 (205)
T ss_dssp CCCCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCcCEEEEEEc
Confidence 6678988554 3345666778888889999999984
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=84.76 E-value=1.9 Score=30.61 Aligned_cols=61 Identities=13% Similarity=0.297 Sum_probs=44.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC---CCCchhhhhhhhhhhhhcceEEEEcCch
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAKGQ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (396)
++|+++. || ..-.++|..|++.|.+|+++.... +..+......+.+.+...|++++.....
T Consensus 23 ~~i~IiG-----~G--~ig~E~A~~l~~~G~~Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~i~~~~~v 86 (119)
T d3lada2 23 GKLGVIG-----AG--VIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARV 86 (119)
T ss_dssp SEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEE
T ss_pred CeEEEEC-----CC--hHHHHHHHHHHHcCCceEEEEeecccCCcccchhHHHHHHHHHhcCceeecCcEE
Confidence 5788776 44 688899999999999999999432 2344555566677777888888655433
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.72 E-value=1.3 Score=31.88 Aligned_cols=76 Identities=11% Similarity=-0.007 Sum_probs=47.7
Q ss_pred ccEEEEEeccCCC--CChH--HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE--E--cCchhhh
Q 016053 74 SKLVLLVSHELSL--SGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--S--AKGQETI 145 (396)
Q Consensus 74 ~~kIl~v~~~~~~--gG~~--~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~ 145 (396)
.+|||++...... -|+| ....+.+++|++.|+++.++.+.... ....... .-+++ + ......+
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T--------Vstd~d~-aD~lYfePlt~e~v~~I 77 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT--------IMTDPEM-ADATYIEPIHWEVVRKI 77 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC--------GGGCGGG-SSEEECSCCCHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh--------hhcChhh-cceeeeecCCHHHHHHH
Confidence 4689999876443 3333 78888999999999999888754331 2211111 11222 1 1233466
Q ss_pred hhccCCcEEEEcC
Q 016053 146 NTALKADLIVLNT 158 (396)
Q Consensus 146 ~~~~~~DiV~~~~ 158 (396)
.+.++||.|....
T Consensus 78 i~~E~pd~il~~~ 90 (127)
T d1a9xa3 78 IEKERPDAVLPTM 90 (127)
T ss_dssp HHHHCCSEEECSS
T ss_pred HHHhCcCCeEEEe
Confidence 6779999998765
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=84.50 E-value=0.89 Score=36.68 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=21.9
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||+||+|.+ +++-.+.-.--.+..+.++|++|.+++
T Consensus 1 m~~VLvi~a--HPDDe~lg~GGtiak~~~~G~~V~vv~ 36 (227)
T d1uana_ 1 MLDLLVVAP--HPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEES--STTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEe--CCChHHHHHHHHHHHHHHcCCeEEEEE
Confidence 468999973 332222222223444677899999888
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=82.64 E-value=1.8 Score=30.48 Aligned_cols=60 Identities=23% Similarity=0.301 Sum_probs=40.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC---CCCchhhhhhhhhhhhhcceEEEEcCc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAKG 141 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (396)
+||+++. || ..-.+++..|++.|++|+++.... +..+......+.+.+...|++++....
T Consensus 22 ~~vvIiG-----gG--~ig~E~A~~l~~~G~~Vtlve~~~~~l~~~d~~~~~~~~~~l~~~GV~~~~~~~ 84 (116)
T d1gesa2 22 ERVAVVG-----AG--YIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAI 84 (116)
T ss_dssp SEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCC
T ss_pred CEEEEEC-----CC--hhhHHHHHHhhccccEEEEEeecchhhhhcchhhHHHHHHHHHHCCCEEEeCCE
Confidence 5788765 34 566789999999999999998432 223334444456667777887765443
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.46 E-value=2.7 Score=29.50 Aligned_cols=61 Identities=20% Similarity=0.316 Sum_probs=42.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC---CCCchhhhhhhhhhhhhcceEEEEcCch
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAKGQ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (396)
++|+++. || ..-.++|..|.+.|.+|+++.... +..+......+.+.+...|++++.....
T Consensus 23 ~~v~IiG-----gG--~ig~E~A~~l~~~G~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~GI~i~~~~~v 86 (117)
T d1ebda2 23 KSLVVIG-----GG--YIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALA 86 (117)
T ss_dssp SEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CeEEEEC-----CC--ccceeeeeeecccccEEEEEEecceecccccchhHHHHHHHHHhcCCEEEcCCEE
Confidence 5788776 44 577788999999999999998332 2334445555666777788888655443
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.25 E-value=3.5 Score=31.48 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=48.8
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
+++.++-+.+. ..+..+..+++.++++...+.. +..++++ ..|+++..+. ...-.-.+.+|+..|++
T Consensus 24 ~~~~i~ai~d~------~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~~~iD~v~I~tp--~~~h~~~~~~~l~~g~~ 92 (184)
T d1ydwa1 24 PNATISGVASR------SLEKAKAFATANNYPESTKIHG---SYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKH 92 (184)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHHTTCCTTCEEES---SHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCE
T ss_pred CCCEEEEEEeC------CccccccchhccccccceeecC---cHHHhhhccccceeeeccc--chhhcchhhhhhhccce
Confidence 67777755543 3455677778888766555443 5566664 4678877776 44445567899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-.-
T Consensus 93 v~~EKP 98 (184)
T d1ydwa1 93 ILLEKP 98 (184)
T ss_dssp EEECSS
T ss_pred eecccc
Confidence 987543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=81.59 E-value=4.6 Score=28.56 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=44.8
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC---C-CCchhhhhhhhhhhhhcceEEEEcCchhhhhh
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---P-SEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
.++|+++. || ..-.++|..|.+.|++|+++-... + ..+......+.+.+...|++++.......+..
T Consensus 30 ~k~vvViG-----gG--~iG~E~A~~l~~~g~~Vtlie~~~~~l~~~~d~~~~~~~~~~l~~~gv~~~~~~~v~~i~~ 100 (123)
T d1nhpa2 30 VNNVVVIG-----SG--YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG 100 (123)
T ss_dssp CCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC
T ss_pred CCEEEEEC-----Ch--HHHHHHHHHhhccceEEEEEEecCcccccccchhhHHHHHHHhhcCCeEEEeCceEEEEEc
Confidence 35788774 33 566788999999999999997332 1 12334445566677778888876665544443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=81.20 E-value=6.5 Score=27.13 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=52.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
.+.++|+++. || ......++.|.+.|.+|+++.+.... .+.......++......... ....+.
T Consensus 10 l~~k~vlVvG-----~G--~va~~ka~~ll~~ga~v~v~~~~~~~-------~~~~~~~~~~i~~~~~~~~~--~dl~~~ 73 (113)
T d1pjqa1 10 LRDRDCLIVG-----GG--DVAERKARLLLEAGARLTVNALTFIP-------QFTVWANEGMLTLVEGPFDE--TLLDSC 73 (113)
T ss_dssp CBTCEEEEEC-----CS--HHHHHHHHHHHHTTBEEEEEESSCCH-------HHHHHHTTTSCEEEESSCCG--GGGTTC
T ss_pred eCCCEEEEEC-----CC--HHHHHHHHHHHHCCCeEEEEeccCCh-------HHHHHHhcCCceeeccCCCH--HHhCCC
Confidence 3557888886 44 57778889999999999999855331 12223333455555433222 223568
Q ss_pred cEEEEcCc---hhhHHHHHHHhcCCC
Q 016053 152 DLIVLNTA---VAGKWLDAVLKEDVP 174 (396)
Q Consensus 152 DiV~~~~~---~~~~~~~~~~~~~~~ 174 (396)
++|++.+. ........+++.+++
T Consensus 74 ~lv~~at~d~~~n~~i~~~a~~~~il 99 (113)
T d1pjqa1 74 WLAIAATDDDTVNQRVSDAAESRRIF 99 (113)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred cEEeecCCCHHHHHHHHHHHHHcCCE
Confidence 88987763 233444555666643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.01 E-value=2.4 Score=30.09 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=41.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC---CCCchhhhhhhhhhhhhcceEEEEcC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAK 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (396)
++++++. || ..-.++|..|.+.|.+|+++.... +..+......+.+.+...|++++...
T Consensus 24 ~~~vIiG-----~G--~ig~E~A~~l~~lG~~Vtii~~~~~~l~~~d~ei~~~l~~~l~~~GV~i~~~~ 85 (122)
T d1v59a2 24 KRLTIIG-----GG--IIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLST 85 (122)
T ss_dssp SEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CeEEEEC-----CC--chHHHHHHHHHhhCcceeEEEeccccchhhhhhhHHHHHHHHHhccceEEeCC
Confidence 5788776 44 678899999999999999998432 23344455556667777788775443
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=80.43 E-value=3.3 Score=30.99 Aligned_cols=78 Identities=10% Similarity=0.049 Sum_probs=45.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
.+||+++.. |..++...++.++...|.+++++++.+..................+..+........ ...+.|+
T Consensus 3 g~ki~~vGD-----~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~--ai~~aDv 75 (161)
T d1vlva2 3 GVKVVFMGD-----TRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEE--ALAGADV 75 (161)
T ss_dssp TCEEEEESC-----TTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHH--HHTTCSE
T ss_pred CCEEEEEcC-----CccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHH--hhhhhhh
Confidence 468999884 334899999999999999999998764433222222222222333333332222211 1246788
Q ss_pred EEEcC
Q 016053 154 IVLNT 158 (396)
Q Consensus 154 V~~~~ 158 (396)
|++..
T Consensus 76 iyt~~ 80 (161)
T d1vlva2 76 VYTDV 80 (161)
T ss_dssp EEECC
T ss_pred eeccc
Confidence 87754
|