Citrus Sinensis ID: 016179
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 394 | 2.2.26 [Sep-21-2011] | |||||||
| F4IF99 | 460 | Probable lipid-A-disaccha | yes | no | 0.982 | 0.841 | 0.680 | 1e-156 | |
| B6IST7 | 401 | Lipid-A-disaccharide synt | yes | no | 0.845 | 0.830 | 0.432 | 5e-73 | |
| Q5FUA3 | 415 | Lipid-A-disaccharide synt | yes | no | 0.835 | 0.792 | 0.384 | 9e-64 | |
| Q0BS63 | 393 | Lipid-A-disaccharide synt | yes | no | 0.842 | 0.844 | 0.361 | 1e-59 | |
| Q2W4D7 | 390 | Lipid-A-disaccharide synt | yes | no | 0.840 | 0.848 | 0.384 | 4e-54 | |
| Q5QYW1 | 379 | Lipid-A-disaccharide synt | yes | no | 0.809 | 0.841 | 0.349 | 2e-50 | |
| Q5LSU1 | 401 | Lipid-A-disaccharide synt | yes | no | 0.855 | 0.840 | 0.339 | 1e-47 | |
| Q7NVY1 | 386 | Lipid-A-disaccharide synt | yes | no | 0.840 | 0.857 | 0.320 | 2e-47 | |
| Q1D393 | 383 | Lipid-A-disaccharide synt | yes | no | 0.837 | 0.861 | 0.342 | 3e-47 | |
| Q1QMM4 | 396 | Lipid-A-disaccharide synt | yes | no | 0.865 | 0.861 | 0.327 | 3e-45 |
| >sp|F4IF99|LPXB_ARATH Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana GN=LPXB PE=2 SV=1 | Back alignment and function desciption |
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Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/391 (68%), Positives = 322/391 (82%), Gaps = 4/391 (1%)
Query: 4 FALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS 63
F L + S+ ++SVI+ A DGELRVFIV+GEVSGD+IGSRLMS++KKL+PLP+
Sbjct: 12 FPLSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIR 71
Query: 64 FSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTV 123
F+GVGGS+M ++G+ SLFPMED+AVMG+WELLPH+YKFRV+LKETI+AA+ F+PH VVTV
Sbjct: 72 FNGVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRVKLKETIDAAVKFKPHVVVTV 131
Query: 124 DSKGFSFRLLKQLRARYSHERL-NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL 182
DSKGFSFRLLK+LRARY +RL N HFHYVAPSFWAWKGGE+RL L+ FVDH+ CIL
Sbjct: 132 DSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRLGGLSEFVDHLFCIL 191
Query: 183 PNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATV 242
PNEE +CR +G+ ATFVGHPV+ED E +L + +P ELK+EG S +++S+PS +TV
Sbjct: 192 PNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS---FSEHSIPSDSTV 248
Query: 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302
IS+LPGSRLQEV RMLPIF+K ++LLKD FP+L+T+IHVA N V++YI +WPVP+
Sbjct: 249 ISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVDHYIGESFSEWPVPA 308
Query: 303 ILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIP 362
ILVP GS+ LKYDAF AS+ ALCTSGTVAVELQLA LP +VAYRAHFLTE IRYKAKIP
Sbjct: 309 ILVPSGSTQLKYDAFGASQAALCTSGTVAVELQLAHLPSLVAYRAHFLTELLIRYKAKIP 368
Query: 363 YISLPNILLDSPIIPEALLQACTPDTLTHLL 393
YISLPNILLDSPIIPEAL QAC P L +L
Sbjct: 369 YISLPNILLDSPIIPEALFQACNPSNLASIL 399
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 8EC: 2 |
| >sp|B6IST7|LPXB_RHOCS Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=lpxB PE=3 SV=1 | Back alignment and function description |
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Score = 275 bits (702), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 220/358 (61%), Gaps = 25/358 (6%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
L +F++AGE SGD +G RLM+A+++ V F+GVGG M+EQG++SLFPMED+A+ G+
Sbjct: 4 LLIFLIAGEPSGDVLGGRLMAALREAMEGHVEFAGVGGPRMAEQGLQSLFPMEDLALFGL 63
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
ELLP + RL +T +A L P AVV++D+ F FR+ ++LR + L
Sbjct: 64 AELLPRLPTLLKRLDQTTKAVLERTPDAVVSIDAPDFCFRVEQRLRRAGARMPL-----I 118
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYVAP+ WAW+ G AR +A F+DH+L +LP E GL TFVGHPVVE +
Sbjct: 119 HYVAPTVWAWRPGRAR--KVAKFLDHLLALLPFEPPYFEAVGLPCTFVGHPVVESGAD-- 174
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
G+ E F+ ++ + ATV+++LPGSR EV ++LP F T+E+L
Sbjct: 175 ------------AGDGERFRRRHGIAPDATVLTVLPGSRRSEVTKLLPDFGATLEILASR 222
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331
+P+L V+ P V + +Q WPVP+I + G + KYDAF+AS AL SGTVA
Sbjct: 223 YPDLQVVVPTVPG--VAETVAEAVQSWPVPAITLLGDAD--KYDAFAASTAALAASGTVA 278
Query: 332 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+EL LAR+P V+AYR H ++ R ++ Y++L NI+LD P++PE L Q CTPD L
Sbjct: 279 LELALARVPAVIAYRIHPVSHALYRRFIRVRYVNLVNIMLDRPLVPELLQQDCTPDRL 336
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Rhodospirillum centenum (strain ATCC 51521 / SW) (taxid: 414684) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q5FUA3|LPXB_GLUOX Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) GN=lpxB PE=3 SV=1 | Back alignment and function description |
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Score = 244 bits (623), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 210/359 (58%), Gaps = 30/359 (8%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++I+AGE SGD IG+RLM A+ P V F+GVGG M G+ SLFPM D+AVMG+ E
Sbjct: 31 IWILAGEASGDVIGARLMQALHAQDPSLV-FAGVGGGRMEALGLHSLFPMSDLAVMGLVE 89
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
++P + + RL E ++ L +P VVT+DS GF+ RLL+++ ER +G HY
Sbjct: 90 VVPRLRQLSQRLLEAVQDIELRKPDLVVTIDSPGFTLRLLQKI------ER-SGIKRVHY 142
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
VAP WAW+ E R+K D +LC+LP E GL FVGHPV++ +
Sbjct: 143 VAPQVWAWR--ENRVKEFPGLWDRLLCLLPFEPDWFAQRGLEGRFVGHPVLQSGVR---- 196
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+GN++ F+ ++++P+ A V+ L+PGSR E R+LP+F K +++L+ +P
Sbjct: 197 ----------QGNAQRFRLRHNIPAHAPVVILMPGSRRSEAPRLLPVFRKMLDILRVQYP 246
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
++ VI VAP + I LI+KWP+ P I+ + K+DAF+A++ AL SGT +
Sbjct: 247 DICPVIPVAPV--IAPTIRQLIRKWPIQPHIVT---DIHDKHDAFAAAQCALTKSGTSTL 301
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
EL + +P V YR + +T R K+P++++ N+L ++PE L + CTP L
Sbjct: 302 ELAMGNVPMAVTYRVNPVTATIARRLIKVPHVAMVNLLAGREVVPELLQENCTPKKLAE 360
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Gluconobacter oxydans (strain 621H) (taxid: 290633) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q0BS63|LPXB_GRABC Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 204/360 (56%), Gaps = 28/360 (7%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++IVAGE SGD +G+RL+ A++ + P + F+G+GG M E G +SLFPM ++AVMG+ E
Sbjct: 6 IYIVAGEHSGDVLGARLIHALRAINP-SIRFAGIGGPRMEECGFQSLFPMHELAVMGLIE 64
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+LP + K R RL++T++ RP V+T+DS GF RLL+ ++ G HY
Sbjct: 65 ILPRVLKLRRRLQQTVQDIETRRPDLVLTIDSPGFCLRLLRAIQP-------FGIKRVHY 117
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
VAP WAW+ E R+K + +LC+LP EE + FVGHPV+E +
Sbjct: 118 VAPQVWAWR--EHRVKRFPGLWERMLCLLPFEEKWFAERNVPGQFVGHPVLESGAD---- 171
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+G++ F+ ++S+ A VI L+PGSR E R+LP++ +T+ LL + P
Sbjct: 172 ----------QGDAARFRARHSLADNARVIVLMPGSRANEAGRLLPVYGETLRLLMQNIP 221
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVE 333
+ VI +A + + + G + WPV I + + K+DAF+A+ AL SGT +E
Sbjct: 222 TITPVIPLASS--TAHTVRGAVSSWPVQPIFITDIAD--KHDAFAAAEAALTKSGTSTLE 277
Query: 334 LQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393
L + +P V YR + +T R ++PY+++ N+L I+PE L + CTP + +L
Sbjct: 278 LAMGGVPMAVTYRVNRITAMMARRLIRVPYVAMVNLLAGREIVPELLQENCTPTKIAAVL 337
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) (taxid: 391165) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q2W4D7|LPXB_MAGSA Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=lpxB PE=3 SV=1 | Back alignment and function description |
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Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 205/369 (55%), Gaps = 38/369 (10%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++++AGE SGD +G RLM+A+K+ VSF+G+GG M +G+ SLFPM +++VMG+ E
Sbjct: 3 IYLIAGEPSGDLLGGRLMAALKERLGEGVSFAGIGGESMRAEGLTSLFPMTELSVMGLVE 62
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA-HFH 152
+LP I K R+K+TI RP A+VT+DS GF+ R+ L+AR P H
Sbjct: 63 VLPRIPKILRRVKQTISDIETKRPDALVTIDSWGFNGRIQAGLKAR------GVPVPRIH 116
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YVAP WAWK G R K LA +D +L +LPNE GL VGHPV+E
Sbjct: 117 YVAPMVWAWKSG--RTKTLARVLDLLLTLLPNEPEWFEKEGLKTLHVGHPVIEGAAS--- 171
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
G+ F+ ++ ++ +LPGSR E A++L F +T+ LL F
Sbjct: 172 -----------RGDGAAFRVRHGFAPDRKLLCVLPGSRHSETAKLLAPFGETIALLARRF 220
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P+L V+ V + ++ ++ W +PS++V G KYDAF+A AL SGTVA+
Sbjct: 221 PDLAVVVPTVET--VADEVSQAVKSWALPSMVVRGPE---KYDAFAACDAALAASGTVAL 275
Query: 333 ELQLARLPCVVAYR----AHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDT 388
EL +ARLP V+ Y+ + F+ F+ K +++L NIL+D ++PE L C PD
Sbjct: 276 ELAMARLPAVITYKVSPVSAFIATRFLGLSLK--FVTLVNILVDEAVMPELLQDDCRPDK 333
Query: 389 LT----HLL 393
L HLL
Sbjct: 334 LAAAVEHLL 342
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) (taxid: 342108) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q5QYW1|LPXB_IDILO Lipid-A-disaccharide synthase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 27/346 (7%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
++ IVAGE SGD +G+ LM A+ K P +F GVGG +M+E+GM S F M+D+AVMGI
Sbjct: 8 KIAIVAGEHSGDLLGAGLMQAIAKRHP-NATFIGVGGPLMAERGMDSFFAMDDLAVMGIA 66
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+ + K K + + +P ++ +D+ F+ + +L+ G + H
Sbjct: 67 EVFQQLPKLLKHRKNLVNYLISEQPDVMIGIDAPDFNLTVEARLKK-------AGISTIH 119
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YV+PS WAW+ E R+K + VDH+LC+LP E+ + L ATFVGHP+ +D
Sbjct: 120 YVSPSVWAWR--EGRIKGIKKAVDHVLCLLPFEKDFYDKHQLPATFVGHPLADD------ 171
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
+ M+ + +N+ + +++LPGSR E+ARM P+F K L + +
Sbjct: 172 --------IPMQWQQTEARNELELEPAVMYLAILPGSRKGEIARMAPVFLKVANKLAERY 223
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
PEL V + + + Q P +I++P G S +A+ L TSGTVA+
Sbjct: 224 PELRFVAPMISEARAAQFRELVDQYSPELNIVLPVGESR---KVMAAANYLLLTSGTVAL 280
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPE 378
E L + P VVAYR H+L+ I+ P+ SLPN+L I+PE
Sbjct: 281 EALLIKRPMVVAYRFHWLSYQIIKRLFHAPFFSLPNLLAGKEIVPE 326
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) (taxid: 283942) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q5LSU1|LPXB_RUEPO Lipid-A-disaccharide synthase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 31/368 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
+RVFI+AGE SGD +G LM+ +++L P V F GVGG M +G+ S FPM ++++MG+
Sbjct: 17 MRVFILAGEPSGDRLGGALMAGLRQLCP-DVQFDGVGGPAMESEGLSSRFPMAELSIMGL 75
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+LP + + R+ ET +A L RP ++T+DS FS R+ + ++ +
Sbjct: 76 VEVLPKYFHLKRRIAETAQAVLAMRPDVMITIDSPDFSLRVARLVKDASDIRTV------ 129
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYVAPS WAW+ G R +A +DH+L +LP E G+ FVGHPVV +
Sbjct: 130 HYVAPSVWAWRPG--RADKMAKVIDHVLALLPFEPPYMERAGMECDFVGHPVVTE----- 182
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
PE + + + + A V+ LPGSR EV R+ P+F +
Sbjct: 183 ----PE----ATGADIAALRTELGL-GAAPVLLALPGSRRGEVERLAPVFGAALRRFLPE 233
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILV------PGGSSNLKYDAFSASRVALC 325
P++ V+ V HV + + + +WP +LV P ++ K AF+A+ +AL
Sbjct: 234 HPDMRVVVPV--VPHVADQVAQQVAEWPGAPVLVDPRGLAPAQAAMRKRAAFAAADLALA 291
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 385
SGTV++EL A P V+AY+ ++LT+ I ++L N++ ++ ++PE L ACT
Sbjct: 292 ASGTVSLELAAAGTPMVIAYKVNWLTQKIAERMVTIDTVTLVNLVSETRVVPECLGPACT 351
Query: 386 PDTLTHLL 393
P+ + L
Sbjct: 352 PENIAARL 359
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Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (taxid: 246200) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q7NVY1|LPXB_CHRVO Lipid-A-disaccharide synthase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 189/371 (50%), Gaps = 40/371 (10%)
Query: 28 KDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIA 87
+ G L+V +VAGE SGD + + LM A++ + F+G+GG M +G S+ P E +A
Sbjct: 4 RKGALKVAMVAGEASGDLLAAHLMDALRAHRS-DIEFAGIGGPRMEARGFHSMVPQEKLA 62
Query: 88 VMGIWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHER 144
V G E+L P + K R RL+E + L RP + VD+ F+ L L+
Sbjct: 63 VRGYSEVLKSLPELLKIRRRLREQL---LEERPDVFIGVDAPDFNLGLEAGLKK------ 113
Query: 145 LNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVV 204
G HYV+PS WAW+ R++ + V+H+LC+ P E + R G+ T+VGHP+
Sbjct: 114 -GGIPTVHYVSPSVWAWR--PERVQKIGRAVNHVLCLFPMEPPLYRQAGVPVTYVGHPLA 170
Query: 205 EDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264
E+ +E + E +++ +P G V +L+PGSR E+ M+PI+ T
Sbjct: 171 --------------SEIPLEPDREAMRDQLGLPQGVPVFTLMPGSRQSELEYMVPIYLDT 216
Query: 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQ----KWPVPSILVPGGSSNLKYDAFSAS 320
LL +PE ++ +A ++ + L + P+ + G + + A AS
Sbjct: 217 ARLLLRQYPEAQFLVPLATRATMDQFEQMLYRFKARDLPIRKLF---GHAQM---AMIAS 270
Query: 321 RVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEAL 380
V L TSGT +E+ L + P V++Y+ LT ++ K K+PY+ LPNIL ++PE L
Sbjct: 271 DVVLVTSGTATLEVALTKRPMVISYKLSALTYRLVKRKIKLPYVGLPNILCGRFVVPELL 330
Query: 381 LQACTPDTLTH 391
+ TP L
Sbjct: 331 QKQATPQKLAE 341
|
Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q1D393|LPXB_MYXXD Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK 1622) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 187/359 (52%), Gaps = 29/359 (8%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
R+ +VAGE SGD+ + L++A++ P ++F G+GG+ ++ QG++ LF +++VMGI
Sbjct: 6 RILVVAGEASGDTHAAELVAALRARRP-DLTFFGMGGARLAAQGVELLFDAREVSVMGIT 64
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+LP I + LK EAA +P + VD F+ RL K+L+A L P +
Sbjct: 65 EVLPRIPRILQILKGLAEAAAERKPDVAILVDIPDFNLRLAKKLKA------LGVPVAY- 117
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YV+P WAW+ G R++ + VD +LCILP EE R G++A +VG PVVE
Sbjct: 118 YVSPMIWAWRRG--RVRTIKRLVDRMLCILPFEEDFYREAGVSARYVGSPVVEQV----- 170
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
P P + F+ + + A ++LLPGSR+ E+ R+LP + + L
Sbjct: 171 ---PSP------DTATAFRERLGLSKDAPTLALLPGSRMGEIRRLLPDMVEAAKRLSAER 221
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P L V+ +AP E IT + V ILV G + + AS A+ SGT +
Sbjct: 222 PGLQVVVPLAPTIDREE-ITSRFEGSGVTPILVEGRAP----EVVGASDAAVVASGTAVL 276
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
E L + P VV YR +T W R K+ ++SL N+L ++PE L TP+ +
Sbjct: 277 EAGLMQRPLVVVYRVSLITYWVGRLMLKVAFVSLINLLAGRRVVPELLQGEMTPERIAE 335
|
Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Myxococcus xanthus (strain DK 1622) (taxid: 246197) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
| >sp|Q1QMM4|LPXB_NITHX Lipid-A-disaccharide synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=lpxB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 192/373 (51%), Gaps = 32/373 (8%)
Query: 24 EGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPM 83
+G + R+F++A E SGD +GS LM +++ V F GVGG M+ +G+ SLFP+
Sbjct: 3 DGTAANSSRRIFLIATEESGDRLGSSLMKVLRRRLDDAVRFEGVGGRSMAREGLVSLFPI 62
Query: 84 EDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHE 143
ED+++MG ++ + R++ET +A + P +V +DS F+ R+ +++RA
Sbjct: 63 EDLSIMGFAAVVKQLPMILRRIRETADAVIAAEPDMLVIIDSPDFTHRVARRVRA----- 117
Query: 144 RLNGPAH--FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVG 200
PA YV+PS WAW+ G AR + +VDH+L +LP E E RL G T+VG
Sbjct: 118 --RRPALPIVDYVSPSVWAWRPGRAR--AMRRYVDHVLALLPFEPEEYRRLAGPPCTYVG 173
Query: 201 HPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260
HP++E L P+ E + + P A ++ LPGSR E+ + +
Sbjct: 174 HPLIEQVGMLR----PDAQE----------RQRRDAPPPALLV--LPGSRRSEIDHHMAV 217
Query: 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSAS 320
F +T+ L+ E+ V+ P H+ + + WP+ +V G K AF +
Sbjct: 218 FGETLRTLQLDAGEMDVVLLTMP--HLIEKVKAAVASWPLQPRIVVGEQG--KQAAFRVA 273
Query: 321 RVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEAL 380
R AL SGTV +EL LA +P V AYR + W + + + L N+++ +IPE L
Sbjct: 274 RAALTKSGTVTLELALAGVPMVTAYRGGAVEAWIAQRVIRTSSVILANLVIGENVIPEFL 333
Query: 381 LQACTPDTLTHLL 393
+ CTP+ L L
Sbjct: 334 QENCTPENLAPAL 346
|
Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Nitrobacter hamburgensis (strain X14 / DSM 10229) (taxid: 323097) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 394 | ||||||
| 255576125 | 469 | Lipid-A-disaccharide synthase, putative | 0.992 | 0.833 | 0.743 | 1e-171 | |
| 359485531 | 460 | PREDICTED: lipid-A-disaccharide synthase | 0.984 | 0.843 | 0.712 | 1e-161 | |
| 356499725 | 481 | PREDICTED: lipid-A-disaccharide synthase | 0.944 | 0.773 | 0.704 | 1e-160 | |
| 297739234 | 432 | unnamed protein product [Vitis vinifera] | 0.936 | 0.854 | 0.737 | 1e-160 | |
| 449503752 | 522 | PREDICTED: lipid-A-disaccharide synthase | 0.984 | 0.743 | 0.678 | 1e-157 | |
| 449450962 | 459 | PREDICTED: lipid-A-disaccharide synthase | 0.984 | 0.845 | 0.677 | 1e-157 | |
| 334184140 | 460 | transferase [Arabidopsis thaliana] gi|33 | 0.982 | 0.841 | 0.680 | 1e-154 | |
| 297835758 | 454 | hypothetical protein ARALYDRAFT_480096 [ | 0.969 | 0.841 | 0.682 | 1e-153 | |
| 242058707 | 445 | hypothetical protein SORBIDRAFT_03g03478 | 0.931 | 0.824 | 0.603 | 1e-132 | |
| 226509561 | 509 | uncharacterized protein LOC100272521 [Ze | 0.977 | 0.756 | 0.570 | 1e-129 |
| >gi|255576125|ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ricinus communis] gi|223531603|gb|EEF33431.1| Lipid-A-disaccharide synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 328/393 (83%), Gaps = 2/393 (0%)
Query: 2 GLFALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLP 61
LF +RR +S + RS ++EGA ++GELRVFI AGEVSGDSIGSRLM+++K L+P P
Sbjct: 18 ALFLKLHRRRYVSVTGRS--IMEGACRNGELRVFIFAGEVSGDSIGSRLMASLKNLSPTP 75
Query: 62 VSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVV 121
+ F+GVGG MMS++G+KSLFPMEDIAVMGIWELLPH+ KFR RLKET EAA F PH VV
Sbjct: 76 IRFAGVGGFMMSKEGLKSLFPMEDIAVMGIWELLPHLNKFRERLKETTEAAFSFLPHVVV 135
Query: 122 TVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCI 181
TVDSKGFSFRLLKQLRARYS +RLN P HFHYVAPSFWAWKGGE RLKNLA FVDH+ CI
Sbjct: 136 TVDSKGFSFRLLKQLRARYSQQRLNSPVHFHYVAPSFWAWKGGEERLKNLANFVDHVFCI 195
Query: 182 LPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGAT 241
LPNEEA+CRLNGL ATFVGHPV+ED LE NLGK E KME NSEDF++K++VPSGAT
Sbjct: 196 LPNEEAVCRLNGLTATFVGHPVLEDLLEFNLGKQNSAHEWKMERNSEDFRSKHAVPSGAT 255
Query: 242 VISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVP 301
VISLLPGSRLQEV RML I+A T+E LK S EL VIHVAPN HVENYI ++KWPVP
Sbjct: 256 VISLLPGSRLQEVTRMLSIYANTMEQLKSSTHELTAVIHVAPNLHVENYIRDSVRKWPVP 315
Query: 302 SILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKI 361
SIL+PG ++KYDA SAS +ALCTSGTVA+ELQLARLPCVVAYRAH LTEW IRYKAKI
Sbjct: 316 SILIPGAIRHMKYDALSASSIALCTSGTVALELQLARLPCVVAYRAHLLTEWIIRYKAKI 375
Query: 362 PYISLPNILLDSPIIPEALLQACTPDTLTHLLM 394
PYISLPNIL+DS IIPEAL QACTP L LL+
Sbjct: 376 PYISLPNILMDSAIIPEALFQACTPRNLASLLL 408
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485531|ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/390 (71%), Positives = 320/390 (82%), Gaps = 2/390 (0%)
Query: 5 ALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSF 64
W R+ S S R+ I+ A KD ELRVFIV+GEVSGD+IGSRLM+++K ++P P+ F
Sbjct: 11 GFSWLVRSFSVSRRAP--IDMAAKDSELRVFIVSGEVSGDTIGSRLMASLKGISPFPIRF 68
Query: 65 SGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVD 124
+GVGG MMS+QG+K LFPMEDIAVMGIWELLPH+ KFR+RLKETIEAA LF+PH V+T+D
Sbjct: 69 AGVGGPMMSKQGLKPLFPMEDIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTID 128
Query: 125 SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPN 184
SKGFSFR LKQLRARYS + L P H H+VAPSFWAWKGGEARLK L FVDH+ CILP
Sbjct: 129 SKGFSFRFLKQLRARYSQQGLVSPVHHHFVAPSFWAWKGGEARLKGLTEFVDHVFCILPY 188
Query: 185 EEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVIS 244
EE +CR NGLAATFVGHP++ED LELNL K E K++GNSEDF++K + GATVIS
Sbjct: 189 EEEVCRSNGLAATFVGHPILEDVLELNLEKNTPQSEWKVKGNSEDFRSKNGIAPGATVIS 248
Query: 245 LLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304
LLPGSRLQEV RML IF+ TVELLK SF EL T+IHVAPN+HV++YI+ WPV L
Sbjct: 249 LLPGSRLQEVTRMLSIFSNTVELLKHSFSELTTIIHVAPNQHVKDYISRTTYNWPVSVKL 308
Query: 305 VPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYI 364
+PGGS +LKYDA SASRVALCTSGTVAVE+QLARLPCVVAYRAHFLTEWFI +KAKIP+I
Sbjct: 309 IPGGSPHLKYDALSASRVALCTSGTVAVEMQLARLPCVVAYRAHFLTEWFICWKAKIPFI 368
Query: 365 SLPNILLDSPIIPEALLQACTPDTLTHLLM 394
S+PNILLDS IIPEALLQACTP L LLM
Sbjct: 369 SIPNILLDSAIIPEALLQACTPAKLASLLM 398
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499725|ref|XP_003518687.1| PREDICTED: lipid-A-disaccharide synthase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/372 (70%), Positives = 317/372 (85%)
Query: 15 ASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSE 74
+SS++ +IE A +DGELRVF+VAGEVSGDSI SRLM+++K L+PLP+ F+GVGG M+
Sbjct: 38 SSSKAAPMIEMAARDGELRVFLVAGEVSGDSIASRLMASLKILSPLPIRFAGVGGVKMTS 97
Query: 75 QGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLK 134
+G++SLFP+EDI+VMG+WELLPH+Y+ RV+L ET++AA LF PH V+T+DSKGFSFR LK
Sbjct: 98 EGLQSLFPIEDISVMGLWELLPHLYRIRVKLNETVKAAALFEPHVVLTIDSKGFSFRFLK 157
Query: 135 QLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGL 194
QLRARY ++L+ PAHFHYVAPSFWAWKGGE RL+ LA FVDH+LCILPNE+ ICRLNGL
Sbjct: 158 QLRARYRQKKLHSPAHFHYVAPSFWAWKGGETRLRGLAEFVDHLLCILPNEDKICRLNGL 217
Query: 195 AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEV 254
ATFVGHPV+ED LELNL E K EGN EDF+ K++VP+GAT+ISLLPGSR+QEV
Sbjct: 218 CATFVGHPVLEDVLELNLRNNSSIHEWKAEGNGEDFRIKHAVPAGATIISLLPGSRMQEV 277
Query: 255 ARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKY 314
+RMLPIF+ TVEL+KD P+L+T+IHVAPN HVEN+I + +WPVP +L+PGG++ L+Y
Sbjct: 278 SRMLPIFSNTVELMKDMVPQLMTIIHVAPNEHVENFIADAVHRWPVPVVLIPGGTTQLRY 337
Query: 315 DAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSP 374
DAFSASR ALCTSGTVAVELQLARLPCVVAYRAH LTEW+I YKAKI YISL NILLD
Sbjct: 338 DAFSASRAALCTSGTVAVELQLARLPCVVAYRAHILTEWYIWYKAKIQYISLTNILLDKA 397
Query: 375 IIPEALLQACTP 386
IIPEAL Q+C P
Sbjct: 398 IIPEALFQSCKP 409
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739234|emb|CBI28885.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/369 (73%), Positives = 311/369 (84%)
Query: 26 AIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMED 85
A KD ELRVFIV+GEVSGD+IGSRLM+++K ++P P+ F+GVGG MMS+QG+K LFPMED
Sbjct: 2 AAKDSELRVFIVSGEVSGDTIGSRLMASLKGISPFPIRFAGVGGPMMSKQGLKPLFPMED 61
Query: 86 IAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERL 145
IAVMGIWELLPH+ KFR+RLKETIEAA LF+PH V+T+DSKGFSFR LKQLRARYS + L
Sbjct: 62 IAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKGFSFRFLKQLRARYSQQGL 121
Query: 146 NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 205
P H H+VAPSFWAWKGGEARLK L FVDH+ CILP EE +CR NGLAATFVGHP++E
Sbjct: 122 VSPVHHHFVAPSFWAWKGGEARLKGLTEFVDHVFCILPYEEEVCRSNGLAATFVGHPILE 181
Query: 206 DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 265
D LELNL K E K++GNSEDF++K + GATVISLLPGSRLQEV RML IF+ TV
Sbjct: 182 DVLELNLEKNTPQSEWKVKGNSEDFRSKNGIAPGATVISLLPGSRLQEVTRMLSIFSNTV 241
Query: 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 325
ELLK SF EL T+IHVAPN+HV++YI+ WPV L+PGGS +LKYDA SASRVALC
Sbjct: 242 ELLKHSFSELTTIIHVAPNQHVKDYISRTTYNWPVSVKLIPGGSPHLKYDALSASRVALC 301
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 385
TSGTVAVE+QLARLPCVVAYRAHFLTEWFI +KAKIP+IS+PNILLDS IIPEALLQACT
Sbjct: 302 TSGTVAVEMQLARLPCVVAYRAHFLTEWFICWKAKIPFISIPNILLDSAIIPEALLQACT 361
Query: 386 PDTLTHLLM 394
P L LLM
Sbjct: 362 PAKLASLLM 370
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503752|ref|XP_004162159.1| PREDICTED: lipid-A-disaccharide synthase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/389 (67%), Positives = 316/389 (81%), Gaps = 1/389 (0%)
Query: 6 LQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFS 65
L RR S + + E A K GELRVFIVAGEVSGD+I SRLM++++ L+P+PV+FS
Sbjct: 67 LNNTRRYFSNYRVAANAFEMAAKHGELRVFIVAGEVSGDTIASRLMASLRTLSPVPVNFS 126
Query: 66 GVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVR-LKETIEAALLFRPHAVVTVD 124
GVGG MMS+QG+ SLF MEDIAVMGIWEL H+ RVR LK T+EAA++F PH +VTVD
Sbjct: 127 GVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLKSIRVRKLKRTVEAAIVFEPHVIVTVD 186
Query: 125 SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPN 184
SKGFSFRLLKQ+RARY +++GP HFHYVAPSFWAWKGGE RLK L FVDHILCILPN
Sbjct: 187 SKGFSFRLLKQIRARYRRYKMDGPLHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPN 246
Query: 185 EEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVIS 244
EE +C+ N LAATFVGHP++ED L+LN+GK ELK+ G+ +DF K ++ AT+IS
Sbjct: 247 EEEVCKSNRLAATFVGHPILEDALDLNVGKDASLIELKIRGSCKDFLIKNNISDDATIIS 306
Query: 245 LLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304
LLPGSRLQEV+RM+PI+ T+ELLK+SFPELIT+IH+APN+HV++YI G++ KWPVP+IL
Sbjct: 307 LLPGSRLQEVSRMIPIYLSTMELLKESFPELITIIHIAPNQHVQDYINGVLHKWPVPAIL 366
Query: 305 VPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYI 364
V GGS KYDAFSAS+VALCTSGTV ELQLARLPCVVAYRAHFLTEWFIR KA + YI
Sbjct: 367 VAGGSPQAKYDAFSASKVALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKANVSYI 426
Query: 365 SLPNILLDSPIIPEALLQACTPDTLTHLL 393
SLPNILL+SP+IPEAL Q CTP L ++
Sbjct: 427 SLPNILLNSPVIPEALFQDCTPAKLHSMI 455
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450962|ref|XP_004143231.1| PREDICTED: lipid-A-disaccharide synthase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 315/388 (81%)
Query: 6 LQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFS 65
L RR S + + E A K GELRVFIVAGEVSGD+I SRLM++++ L+P+PV+FS
Sbjct: 5 LNNTRRYFSYYRVAANAFEMAAKHGELRVFIVAGEVSGDTIASRLMASLRTLSPVPVNFS 64
Query: 66 GVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDS 125
GVGG MMS+QG+ SLF MEDIAVMGIWEL H+ R +LK T+EAA++F PH +VTVDS
Sbjct: 65 GVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLKSIREKLKRTVEAAIVFEPHVIVTVDS 124
Query: 126 KGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE 185
KGFSFRLLKQ+RARY +++GP HFHYVAPSFWAWKGGE RLK L FVDHILCILPNE
Sbjct: 125 KGFSFRLLKQIRARYRRYKMDGPLHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE 184
Query: 186 EAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISL 245
E +C+ N LAATFVGHP++ED L+LN+GK ELK+ G+ +DF K ++ AT+ISL
Sbjct: 185 EEVCKSNRLAATFVGHPILEDALDLNVGKDASLIELKIRGSCKDFLIKNNISDDATIISL 244
Query: 246 LPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILV 305
LPGSRLQEV+RM+PI+ T+ELLK+SFPELIT+IHVAPN+HV++YI G++ KWPVP+ILV
Sbjct: 245 LPGSRLQEVSRMIPIYLSTMELLKESFPELITIIHVAPNQHVQDYINGVLHKWPVPAILV 304
Query: 306 PGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYIS 365
GGS KYDAFSAS+VALCTSGTV ELQLARLPCVVAYRAHFLTEWFIR KA + YIS
Sbjct: 305 AGGSPQAKYDAFSASKVALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKANVSYIS 364
Query: 366 LPNILLDSPIIPEALLQACTPDTLTHLL 393
LPNILL+SP+IPEAL Q CTP L ++
Sbjct: 365 LPNILLNSPVIPEALFQDCTPAKLHSMI 392
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334184140|ref|NP_178535.3| transferase [Arabidopsis thaliana] gi|330250753|gb|AEC05847.1| transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/391 (68%), Positives = 322/391 (82%), Gaps = 4/391 (1%)
Query: 4 FALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS 63
F L + S+ ++SVI+ A DGELRVFIV+GEVSGD+IGSRLMS++KKL+PLP+
Sbjct: 12 FPLSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIR 71
Query: 64 FSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTV 123
F+GVGGS+M ++G+ SLFPMED+AVMG+WELLPH+YKFRV+LKETI+AA+ F+PH VVTV
Sbjct: 72 FNGVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRVKLKETIDAAVKFKPHVVVTV 131
Query: 124 DSKGFSFRLLKQLRARYSHERL-NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL 182
DSKGFSFRLLK+LRARY +RL N HFHYVAPSFWAWKGGE+RL L+ FVDH+ CIL
Sbjct: 132 DSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRLGGLSEFVDHLFCIL 191
Query: 183 PNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATV 242
PNEE +CR +G+ ATFVGHPV+ED E +L + +P ELK+EG S +++S+PS +TV
Sbjct: 192 PNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS---FSEHSIPSDSTV 248
Query: 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302
IS+LPGSRLQEV RMLPIF+K ++LLKD FP+L+T+IHVA N V++YI +WPVP+
Sbjct: 249 ISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVDHYIGESFSEWPVPA 308
Query: 303 ILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIP 362
ILVP GS+ LKYDAF AS+ ALCTSGTVAVELQLA LP +VAYRAHFLTE IRYKAKIP
Sbjct: 309 ILVPSGSTQLKYDAFGASQAALCTSGTVAVELQLAHLPSLVAYRAHFLTELLIRYKAKIP 368
Query: 363 YISLPNILLDSPIIPEALLQACTPDTLTHLL 393
YISLPNILLDSPIIPEAL QAC P L +L
Sbjct: 369 YISLPNILLDSPIIPEALFQACNPSNLASIL 399
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297835758|ref|XP_002885761.1| hypothetical protein ARALYDRAFT_480096 [Arabidopsis lyrata subsp. lyrata] gi|297331601|gb|EFH62020.1| hypothetical protein ARALYDRAFT_480096 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/391 (68%), Positives = 320/391 (81%), Gaps = 9/391 (2%)
Query: 4 FALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS 63
F L + S+ ++SVI+ A DGELRVFIV+GEVSGD+IGSRLMS++KKL+PLP+
Sbjct: 11 FPLSTFTKRYSSFQATKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPLR 70
Query: 64 FSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTV 123
F+GVGGS+M +QG+ SLFPMED+AVMG+WELLPH+YKFRV+LKETI+AA+ F+PH VVTV
Sbjct: 71 FNGVGGSLMCKQGLTSLFPMEDLAVMGLWELLPHLYKFRVKLKETIDAAVKFKPHIVVTV 130
Query: 124 DSKGFSFRLLKQLRARYSHERL-NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL 182
DSKGFSFRLLK+LRARY+ +RL N P HFHYVAPSFWAWKGGE+RL L+ FVDH+ CIL
Sbjct: 131 DSKGFSFRLLKELRARYNQQRLENCPVHFHYVAPSFWAWKGGESRLGGLSEFVDHLFCIL 190
Query: 183 PNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATV 242
PNEE +CR +G+ ATFVGHP +ED E NL P ELK+EG S +++S+PS +T+
Sbjct: 191 PNEERVCREHGVEATFVGHPALEDASEFNL-----PQELKLEGLS---FSEHSIPSDSTI 242
Query: 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302
IS+LPGSRLQE RMLPIF K ++LLKD FP+L+T+IHVA N V++YI + WPVP+
Sbjct: 243 ISVLPGSRLQEAERMLPIFCKAMKLLKDPFPKLVTLIHVASNSQVDHYIGESLGGWPVPA 302
Query: 303 ILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIP 362
ILVPGGS+ LKYDAF S+ ALCTSGTVAVELQLARLP +VAYRAHFLTE IRYKAKIP
Sbjct: 303 ILVPGGSTQLKYDAFGVSQAALCTSGTVAVELQLARLPSLVAYRAHFLTELLIRYKAKIP 362
Query: 363 YISLPNILLDSPIIPEALLQACTPDTLTHLL 393
YISLPNILLDSPIIPEAL QAC P L +L
Sbjct: 363 YISLPNILLDSPIIPEALFQACNPSNLASIL 393
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242058707|ref|XP_002458499.1| hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] gi|241930474|gb|EES03619.1| hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/368 (60%), Positives = 292/368 (79%), Gaps = 1/368 (0%)
Query: 22 VIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLF 81
V++ A +DGELRVF+VAGEVSGDS+ SRLM++++ L+P+PV F+GVGG++M ++G++SLF
Sbjct: 9 VVDAAARDGELRVFVVAGEVSGDSLASRLMASLRALSPVPVRFAGVGGALMCKEGLQSLF 68
Query: 82 PMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYS 141
PME+IA+MG+WELLPHIY + ++++T AA+LF+PHAVVTVDSKGFSFRLLKQL+ R S
Sbjct: 69 PMEEIAIMGMWELLPHIYSIKRKIEDTANAAMLFQPHAVVTVDSKGFSFRLLKQLKCR-S 127
Query: 142 HERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGH 201
++++ P H HYV+PSFWAWKGGE+RL L FVDH+ CILP EE ICRLNGL AT+VGH
Sbjct: 128 NQKVQNPLHIHYVSPSFWAWKGGESRLSKLHNFVDHMFCILPFEEEICRLNGLPATYVGH 187
Query: 202 PVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261
P+++D + LN+G E K + + E F+ ++ + GAT+I++LPGSR+QEV RMLPIF
Sbjct: 188 PLLDDAIGLNMGPELSSDESKYQRSCEAFQLEHGLSPGATIITMLPGSRMQEVVRMLPIF 247
Query: 262 AKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASR 321
TV+ L+ +F EL VI VAP+R V YI ++Q P P +L+PGGS +YDAFSASR
Sbjct: 248 LHTVQNLRQTFNELSLVIPVAPHRDVRTYIEKVVQSGPFPVVLIPGGSLKERYDAFSASR 307
Query: 322 VALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALL 381
VALCTSGT +EL LARLPCVVAY+AHF+TE FI + KI +ISLPNILL+SP++PE L
Sbjct: 308 VALCTSGTAVMELMLARLPCVVAYQAHFITECFIHLRKKINFISLPNILLNSPVVPEILF 367
Query: 382 QACTPDTL 389
+ACT L
Sbjct: 368 RACTAKNL 375
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226509561|ref|NP_001140462.1| uncharacterized protein LOC100272521 [Zea mays] gi|194699616|gb|ACF83892.1| unknown [Zea mays] gi|414880547|tpg|DAA57678.1| TPA: hypothetical protein ZEAMMB73_897367 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/391 (57%), Positives = 298/391 (76%), Gaps = 6/391 (1%)
Query: 4 FALQWQRRNMSASSRSRS-----VIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLA 58
A + +RR + +RS V++ A +DGELRVF+VAGEVSGDS+ SRLM+A++ L+
Sbjct: 6 IAAEGRRRARPSRPLARSLSYGRVVDAAARDGELRVFVVAGEVSGDSLASRLMAALRALS 65
Query: 59 PLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPH 118
P+PV F+GVGG +M ++G++SLFPME+IA+MG+WELLPHIY + +++++ AA+LF+PH
Sbjct: 66 PVPVRFAGVGGELMCKEGLQSLFPMEEIAIMGMWELLPHIYSIKRKIEDSANAAMLFQPH 125
Query: 119 AVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHI 178
AVVT+DSKGFSFRLLKQL+ R S++++ P H HYV+PSFWAWKGGE+RL L FVDH+
Sbjct: 126 AVVTIDSKGFSFRLLKQLKCR-SNQKVQSPLHIHYVSPSFWAWKGGESRLSKLHNFVDHM 184
Query: 179 LCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPS 238
LCILP EE ICRLNGL AT+VGHP+++D + LN+G + K + + E F+ ++ +
Sbjct: 185 LCILPFEEEICRLNGLPATYVGHPLLDDAIGLNMGTELCSDKSKYQRSCEAFRLEHGLSP 244
Query: 239 GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKW 298
GAT+I++LPGSR+QEV RMLPIF TV+ L+ +F EL VI VAP+R V YI ++Q
Sbjct: 245 GATIITMLPGSRMQEVVRMLPIFLHTVQNLRHTFDELSLVIPVAPHRDVRTYIENVVQSE 304
Query: 299 PVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYK 358
P P +L+PGGS +Y+AFSASR ALCTSGT +EL LARLPCVVAY+AHF+TE FI +
Sbjct: 305 PFPVVLIPGGSLKERYNAFSASRAALCTSGTAVMELMLARLPCVVAYQAHFITECFIHLR 364
Query: 359 AKIPYISLPNILLDSPIIPEALLQACTPDTL 389
KI +ISLPNILL+S ++PE L ACT L
Sbjct: 365 KKINFISLPNILLNSLVVPEILFGACTAKNL 395
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 394 | ||||||
| UNIPROTKB|P10441 | 382 | lpxB [Escherichia coli K-12 (t | 0.395 | 0.408 | 0.339 | 1.9e-31 | |
| TIGR_CMR|SO_1642 | 385 | SO_1642 "lipid A disaccharide | 0.472 | 0.483 | 0.321 | 1.5e-30 | |
| TIGR_CMR|SPO_1675 | 401 | SPO_1675 "lipid-A-disaccharide | 0.558 | 0.548 | 0.327 | 1e-29 | |
| UNIPROTKB|Q9KPW5 | 379 | lpxB "Lipid-A-disaccharide syn | 0.408 | 0.424 | 0.310 | 2.3e-27 | |
| TIGR_CMR|VC_2247 | 379 | VC_2247 "lipid-A-disaccharide | 0.408 | 0.424 | 0.310 | 2.3e-27 | |
| TIGR_CMR|CBU_0620 | 376 | CBU_0620 "lipid A disaccharide | 0.576 | 0.603 | 0.258 | 1.8e-18 | |
| TIGR_CMR|CPS_1568 | 393 | CPS_1568 "lipid-A-disaccharide | 0.558 | 0.559 | 0.275 | 1.8e-18 | |
| TIGR_CMR|GSU_2261 | 384 | GSU_2261 "lipid A disaccharide | 0.571 | 0.585 | 0.266 | 9.2e-18 | |
| TIGR_CMR|CJE_0336 | 364 | CJE_0336 "lipid-A-disaccharide | 0.307 | 0.332 | 0.295 | 4.8e-17 |
| UNIPROTKB|P10441 lpxB [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 54/159 (33%), Positives = 80/159 (50%)
Query: 236 VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLI 295
+P A ++LLPGSR EV + F KT +LL+ ++P+L V+ + + E +
Sbjct: 187 IPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQFERIKA 246
Query: 296 QKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFI 355
+ P S+ + G +A AS AL SGT A+E LA+ P VV YR T W
Sbjct: 247 EVAPDLSVHLLDGMGR---EAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTFWLA 303
Query: 356 RYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLLM 394
+ K Y+SLPN+L ++ E L + C P L L+
Sbjct: 304 KRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALL 342
|
|
| TIGR_CMR|SO_1642 SO_1642 "lipid A disaccharide synthase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 220 (82.5 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 64/199 (32%), Positives = 102/199 (51%)
Query: 28 KDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIA 87
K +L +VAGE+SGD +G+ LM+A++K P G +SLF ME++A
Sbjct: 3 KKSQLVFAMVAGELSGDILGAGLMAALQKTHP-NARFVGIGGPRMEALGFESLFAMEELA 61
Query: 88 VMGIWELLPHIYKF-RVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLN 146
VMGI E+L + + VR I++ +P + +D+ F+ L +L+A+
Sbjct: 62 VMGIVEVLSRLPRLLHVRAS-LIKSITELKPDCFIGIDAPDFNIGLELKLKAQ------- 113
Query: 147 GPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVED 206
G HYV+PS WAW+ R+ +A + +L +LP E+A + + TFVGH + +D
Sbjct: 114 GIKTVHYVSPSVWAWR--PKRIFKIAKATNMVLSLLPFEKAFYDKHQVPCTFVGHTLADD 171
Query: 207 C-LELNLGKGPEPCELKME 224
LE + + EL E
Sbjct: 172 IPLESDKACARQVLELDQE 190
|
|
| TIGR_CMR|SPO_1675 SPO_1675 "lipid-A-disaccharide synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 80/244 (32%), Positives = 125/244 (51%)
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYVAPS WAW+ G A +A +DH+L +LP E G+ FVGHPVV +
Sbjct: 130 HYVAPSVWAWRPGRA--DKMAKVIDHVLALLPFEPPYMERAGMECDFVGHPVVTE----- 182
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
PE + + + + A V+ LPGSR EV R+ P+F +
Sbjct: 183 ----PEATGADIAA----LRTELGL-GAAPVLLALPGSRRGEVERLAPVFGAALRRFLPE 233
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILV------PGGSSNLKYDAFSASRVALC 325
P++ V+ V P HV + + + +WP +LV P ++ K AF+A+ +AL
Sbjct: 234 HPDMRVVVPVVP--HVADQVAQQVAEWPGAPVLVDPRGLAPAQAAMRKRAAFAAADLALA 291
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 385
SGTV++EL A P V+AY+ ++LT+ I ++L N++ ++ ++PE L ACT
Sbjct: 292 ASGTVSLELAAAGTPMVIAYKVNWLTQKIAERMVTIDTVTLVNLVSETRVVPECLGPACT 351
Query: 386 PDTL 389
P+ +
Sbjct: 352 PENI 355
|
|
| UNIPROTKB|Q9KPW5 lpxB "Lipid-A-disaccharide synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 191 (72.3 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIAVMGI 91
LR+ IV GE+SGD++G + A++ P G +SLF ME++AVMG+
Sbjct: 5 LRIGIVVGELSGDTLGEGFIKAIRARYP-DAEFVGIGGPKMNALGCQSLFDMEELAVMGL 63
Query: 92 WELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGP 148
E+L P + K + L + A P V +D+ F+ RL L+ G
Sbjct: 64 VEVLGRLPRLLKVKAELVKYFTAN---PPDVFVGIDAPDFNLRLELSLKQA-------GI 113
Query: 149 AHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 205
HYV+PS WAW+ + R+ +AA +L LP E+A + F+GH + +
Sbjct: 114 KTVHYVSPSVWAWR--QNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLAD 168
|
|
| TIGR_CMR|VC_2247 VC_2247 "lipid-A-disaccharide synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 191 (72.3 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIAVMGI 91
LR+ IV GE+SGD++G + A++ P G +SLF ME++AVMG+
Sbjct: 5 LRIGIVVGELSGDTLGEGFIKAIRARYP-DAEFVGIGGPKMNALGCQSLFDMEELAVMGL 63
Query: 92 WELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGP 148
E+L P + K + L + A P V +D+ F+ RL L+ G
Sbjct: 64 VEVLGRLPRLLKVKAELVKYFTAN---PPDVFVGIDAPDFNLRLELSLKQA-------GI 113
Query: 149 AHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 205
HYV+PS WAW+ + R+ +AA +L LP E+A + F+GH + +
Sbjct: 114 KTVHYVSPSVWAWR--QNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLAD 168
|
|
| TIGR_CMR|CBU_0620 CBU_0620 "lipid A disaccharide synthase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 240 (89.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 65/251 (25%), Positives = 117/251 (46%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIAVMGIWE 93
V ++AGE SGD +G+ L ++K L P E G++ + +AV+G+ E
Sbjct: 6 VLLIAGEPSGDLLGAHLAQSLKSLEP-NLKLAGMGGKRMREAGVEVFINADKLAVVGLLE 64
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+L R ++ P VV +D GF+ + KQ + G +Y
Sbjct: 65 ILRQFRDIRHAMQTLKRYFKKTPPDLVVFIDYPGFNLHMAKQAKKA-------GIKVLYY 117
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
V+P WAW+ G R+K + +VDH+ + EE + + + +FVGHP L
Sbjct: 118 VSPQIWAWRYG--RIKKIKKYVDHMAVLFDFEEKLYQKENVPVSFVGHP---------LA 166
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
P P + N + ++++ +++L PGSR QE+ ++LP+ + +L++ P
Sbjct: 167 NAPTP---SLSRN--EICKQFNLDPDKPIVALFPGSREQEINKLLPMMVQAGKLIQTQIP 221
Query: 274 ELITVIHVAPN 284
+ ++ +A N
Sbjct: 222 TVQFILPLALN 232
|
|
| TIGR_CMR|CPS_1568 CPS_1568 "lipid-A-disaccharide synthase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 241 (89.9 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 68/247 (27%), Positives = 130/247 (52%)
Query: 34 VF-IVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIAVMGIW 92
VF +V GE SGD++G+ L++++++ P G +SLF M++++VMG+
Sbjct: 13 VFAMVVGEHSGDTLGAGLITSLRQTHP-HAKFIGIGGPKMLALGFESLFAMDELSVMGLV 71
Query: 93 ELLPHIYKFRVRLKETI-EAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+L I + + +++T+ + + +P + +D+ F+ L +L+ + G
Sbjct: 72 EVLGRIRRL-LHVRKTLTDFFITNKPDVFIGIDAPDFNIGLELKLKVK-------GIKTV 123
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYV+PS WAW+ E R+ +A D +L +LP E+A + + TFVGHP+ +D
Sbjct: 124 HYVSPSVWAWR--EKRIFKIAKATDMVLALLPFEKAFYDKHNVPCTFVGHPLADD----- 176
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
+ M+ + ++K + +++L+PGSR E++R+L F ++ + L+
Sbjct: 177 ---------IPMQSDKVLARDKLGLAQDKKILALMPGSRGGELSRLLEDFFESAKQLQAQ 227
Query: 272 FPELITV 278
EL+ V
Sbjct: 228 DSELLFV 234
|
|
| TIGR_CMR|GSU_2261 GSU_2261 "lipid A disaccharide synthase (lpxB)" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 235 (87.8 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 67/251 (26%), Positives = 121/251 (48%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPXXXXXXXXXXXXEQGMKSLFPMEDIAVMGIW 92
R+ IVAGE SGD G+ L+ +L P E G+++L ++AV+GI
Sbjct: 8 RIMIVAGEASGDLHGAGLVREALRLDPT-LSFFGIGGPRMREAGVETLVDSSEMAVVGIV 66
Query: 93 ELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+L HI R T+ ++ P ++ +D F+ L AR + R +G
Sbjct: 67 EVLAHIGVIS-RAFMTLRQVIVSNPPDLLILIDYPDFNMLL-----ARVA--RRHGVKVL 118
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
+Y++P WAW+ G R+K + VD + + P E G+ +FVGHP+ D +
Sbjct: 119 YYISPQVWAWRTG--RVKTIGRLVDRMAVVFPFEVPFYERAGVPVSFVGHPLA-DRVRPT 175
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
+G+ ++ + + G V+ L PGSR E+A++ P+ ++ + L++
Sbjct: 176 MGR-------------DEALASFGLDPGRRVVGLFPGSRRGEIAKLFPVILESAQQLRER 222
Query: 272 FPELITVIHVA 282
+P++ ++ +A
Sbjct: 223 YPDIQFILPLA 233
|
|
| TIGR_CMR|CJE_0336 CJE_0336 "lipid-A-disaccharide synthetase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 78 KSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLR 137
K L+ + + MG E+LP I+K + +KE + L AV+ +DS F+ K L+
Sbjct: 50 KPLYSSHEFSAMGFIEVLPLIFKAKKAIKELVNLTLSQTMDAVLCIDSPAFNIPFAKALK 109
Query: 138 ARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAAT 197
S ++ P +Y+ P WAWK G R+ + + D + ILP + N +T
Sbjct: 110 KAGS--KI--P-RIYYILPQVWAWKKG--RIPIIESHFDILASILPFDNQF--FN--KST 158
Query: 198 FVGHPVVEDCLE 209
++GHP++++ E
Sbjct: 159 YIGHPLLDEIKE 170
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5QYW1 | LPXB_IDILO | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3497 | 0.8096 | 0.8416 | yes | no |
| F4IF99 | LPXB_ARATH | 2, ., 4, ., 1, ., 1, 8, 2 | 0.6803 | 0.9822 | 0.8413 | yes | no |
| Q3JR42 | LPXB_BURP1 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3342 | 0.8375 | 0.8505 | yes | no |
| B1JBP7 | LPXB_PSEPW | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3214 | 0.8477 | 0.8906 | yes | no |
| Q1QMM4 | LPXB_NITHX | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3270 | 0.8654 | 0.8611 | yes | no |
| Q88MG7 | LPXB_PSEPK | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3241 | 0.8477 | 0.8906 | yes | no |
| Q1H152 | LPXB_METFK | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3204 | 0.8375 | 0.8730 | yes | no |
| B4ECL8 | LPXB_BURCJ | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3204 | 0.8350 | 0.8457 | yes | no |
| C3K6G9 | LPXB_PSEFS | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3296 | 0.8426 | 0.8759 | yes | no |
| B2JIB3 | LPXB_BURP8 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3128 | 0.8401 | 0.8508 | yes | no |
| Q886N0 | LPXB_PSESM | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3516 | 0.8451 | 0.8763 | yes | no |
| Q1BHG9 | LPXB_BURCA | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3204 | 0.8350 | 0.8457 | yes | no |
| B8F5I8 | LPXB_HAEPS | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3055 | 0.8451 | 0.8604 | yes | no |
| A5W837 | LPXB_PSEP1 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3241 | 0.8477 | 0.8906 | yes | no |
| Q6N5R2 | LPXB_RHOPA | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3217 | 0.8553 | 0.8575 | yes | no |
| Q2W4D7 | LPXB_MAGSA | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3848 | 0.8401 | 0.8487 | yes | no |
| Q48F72 | LPXB_PSE14 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3314 | 0.8401 | 0.8710 | yes | no |
| Q62JD7 | LPXB_BURMA | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3333 | 0.8401 | 0.8530 | yes | no |
| Q4ZWR5 | LPXB_PSEU2 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3314 | 0.8401 | 0.8710 | yes | no |
| B2T5I1 | LPXB_BURPP | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3150 | 0.8527 | 0.8637 | yes | no |
| A3NWL7 | LPXB_BURP0 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3333 | 0.8401 | 0.8530 | yes | no |
| Q1R020 | LPXB_CHRSD | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3233 | 0.8401 | 0.8575 | yes | no |
| Q0BE28 | LPXB_BURCM | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3149 | 0.8350 | 0.8457 | yes | no |
| Q89KQ7 | LPXB_BRAJA | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3142 | 0.8426 | 0.8469 | yes | no |
| Q47F79 | LPXB_DECAR | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3224 | 0.8426 | 0.8691 | yes | no |
| Q63T25 | LPXB_BURPS | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3342 | 0.8375 | 0.8505 | yes | no |
| Q1D393 | LPXB_MYXXD | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3426 | 0.8375 | 0.8616 | yes | no |
| A2SB86 | LPXB_BURM9 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3305 | 0.8401 | 0.8530 | yes | no |
| Q7NVY1 | LPXB_CHRVO | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3207 | 0.8401 | 0.8575 | yes | no |
| A1V555 | LPXB_BURMS | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3333 | 0.8401 | 0.8530 | yes | no |
| Q2IW93 | LPXB_RHOP2 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3243 | 0.8654 | 0.8676 | yes | no |
| Q0BS63 | LPXB_GRABC | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3611 | 0.8426 | 0.8447 | yes | no |
| A6V1E5 | LPXB_PSEA7 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3241 | 0.8527 | 0.8888 | yes | no |
| Q1I639 | LPXB_PSEE4 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3388 | 0.8451 | 0.888 | yes | no |
| B0KSB2 | LPXB_PSEPG | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3186 | 0.8477 | 0.8906 | yes | no |
| Q5LSU1 | LPXB_RUEPO | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3396 | 0.8553 | 0.8403 | yes | no |
| B6IST7 | LPXB_RHOCS | 2, ., 4, ., 1, ., 1, 8, 2 | 0.4329 | 0.8451 | 0.8304 | yes | no |
| Q39F56 | LPXB_BURS3 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3232 | 0.8350 | 0.8457 | yes | no |
| A3MKS9 | LPXB_BURM7 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3305 | 0.8401 | 0.8530 | yes | no |
| Q3SRI5 | LPXB_NITWN | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3342 | 0.8477 | 0.8434 | yes | no |
| A3NAT4 | LPXB_BURP6 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3314 | 0.8375 | 0.8505 | yes | no |
| A4JF62 | LPXB_BURVG | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3176 | 0.8350 | 0.8457 | yes | no |
| A9AIM7 | LPXB_BURM1 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3259 | 0.8350 | 0.8457 | yes | no |
| Q8XZH8 | LPXB_RALSO | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3212 | 0.8401 | 0.8487 | yes | no |
| Q2IL69 | LPXB_ANADE | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3407 | 0.8350 | 0.8590 | yes | no |
| A0K8D0 | LPXB_BURCH | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3204 | 0.8350 | 0.8457 | yes | no |
| Q13XC9 | LPXB_BURXL | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3178 | 0.8527 | 0.8637 | yes | no |
| B1YS61 | LPXB_BURA4 | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3149 | 0.8350 | 0.8457 | yes | no |
| B1JUD7 | LPXB_BURCC | 2, ., 4, ., 1, ., 1, 8, 2 | 0.3204 | 0.8350 | 0.8457 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.766 |
| 4th Layer | 2.4.1.182 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 394 | |||
| PRK00025 | 380 | PRK00025, lpxB, lipid-A-disaccharide synthase; Rev | 1e-102 | |
| COG0763 | 381 | COG0763, LpxB, Lipid A disaccharide synthetase [Ce | 1e-102 | |
| pfam02684 | 373 | pfam02684, LpxB, Lipid-A-disaccharide synthetase | 4e-76 | |
| TIGR00215 | 385 | TIGR00215, lpxB, lipid-A-disaccharide synthase | 8e-51 | |
| PRK01021 | 608 | PRK01021, lpxB, lipid-A-disaccharide synthase; Rev | 2e-39 | |
| PRK14089 | 347 | PRK14089, PRK14089, ipid-A-disaccharide synthase; | 3e-25 |
| >gnl|CDD|234580 PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Score = 307 bits (790), Expect = e-102
Identities = 126/363 (34%), Positives = 190/363 (52%), Gaps = 28/363 (7%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LR+ IVAGEVSGD +G+ L+ A+K AP + F GVGG M G +SLF ME++AVMG+
Sbjct: 2 LRIAIVAGEVSGDLLGAGLIRALKARAP-NLEFVGVGGPRMQAAGCESLFDMEELAVMGL 60
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+LP + + + L P + +D+ F+ RL K+LR P
Sbjct: 61 VEVLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKA------GIPT-I 113
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYV+PS WAW+ G R +A DH+L + P E A G+ TFVGHP+ +
Sbjct: 114 HYVSPSVWAWRQG--RAFKIAKATDHVLALFPFEAAFYDKLGVPVTFVGHPLADA----- 166
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
+ + + + + + A V++LLPGSR QE+ R+LP F K +LL+
Sbjct: 167 ---------IPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR 217
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331
+P+L V+ + N I + ++ + + K +A +A+ AL SGTV
Sbjct: 218 YPDLRFVLPLV-NPKRREQIEEALAEYAGLEVTL---LDGQKREAMAAADAALAASGTVT 273
Query: 332 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
+EL L ++P VV Y+ LT W + K+PY+SLPN+L ++PE L + TP+ L
Sbjct: 274 LELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLAR 333
Query: 392 LLM 394
L+
Sbjct: 334 ALL 336
|
Length = 380 |
| >gnl|CDD|223834 COG0763, LpxB, Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-102
Identities = 125/365 (34%), Positives = 192/365 (52%), Gaps = 29/365 (7%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
L++ + AGE SGD +G+ L+ A+K P V F GVGG M +G++SLF ME+++VMG
Sbjct: 2 LKIALSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEKMEAEGLESLFDMEELSVMGF 60
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+L + + +E + L +P ++ +DS F+ R+ K+LR ++
Sbjct: 61 VEVLGRLPRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKI-----I 115
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYV+PS WAW+ R +A +VDH+L ILP E A GL T+VGHP+ +
Sbjct: 116 HYVSPSVWAWR--PKRAVKIAKYVDHLLAILPFEPAFYDKFGLPCTYVGHPLAD------ 167
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
E+ + + E + K + + ++LLPGSR E+ R+LP F + + LK
Sbjct: 168 --------EIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR 219
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCTSGT 329
+P+L V+ + I KW V S+++ K AF+A+ AL SGT
Sbjct: 220 YPDLKFVLPLVN--AKYRRIIEEALKWEVAGLSLILI---DGEKRKAFAAADAALAASGT 274
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E LA P VVAY+ +T + + K+PY+SLPNIL I+PE + + CTP+ L
Sbjct: 275 ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENL 334
Query: 390 THLLM 394
L
Sbjct: 335 ARALE 339
|
Length = 381 |
| >gnl|CDD|217184 pfam02684, LpxB, Lipid-A-disaccharide synthetase | Back alignment and domain information |
|---|
Score = 239 bits (613), Expect = 4e-76
Identities = 116/353 (32%), Positives = 179/353 (50%), Gaps = 26/353 (7%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
+F+ AGE SGD +G L+ +K+ P + F GVGG M +G +SL ME+I+VMG E
Sbjct: 1 IFLSAGEASGDILGGELIQNLKEHYP-NLRFIGVGGPKMEAEGFESLANMEEISVMGFIE 59
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+L ++K ++ ++ L +P ++ +D+ F+ RL K+LR ++ HY
Sbjct: 60 VLGRLFKLLKIYQKVVKNILKKKPDTLILIDAPDFNLRLAKKLRKLGPKLKI-----IHY 114
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
V+PS WAW+ R K +A + D +L ILP E+ + GL +VGHP+++
Sbjct: 115 VSPSVWAWR--PKRAKIIAKYTDLLLAILPFEKGFFQKFGLDCRYVGHPLLD-------- 164
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
E+K+ K +++LLPGSR E+ R+LP + L FP
Sbjct: 165 ------EIKLYKKRASAKELLIDHD-EPILALLPGSRKGEIRRLLPPIQVAAQQLSSQFP 217
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVE 333
L ++ + ++ E L + S+L S +Y+A A+ AL SGT +E
Sbjct: 218 NLKLLVPLVNKKYEEQIEDTLALENCDVSLLEI---SGERYEAMFAADAALAKSGTATLE 274
Query: 334 LQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTP 386
LA P VVAYR LT + + KI YISLPNI+L+ I+PE + C
Sbjct: 275 AALAGTPMVVAYRVKPLTFFLAKRLVKIDYISLPNIILNREIVPEFIQGECDA 327
|
This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2, 3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. Length = 373 |
| >gnl|CDD|129319 TIGR00215, lpxB, lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 8e-51
Identities = 106/360 (29%), Positives = 172/360 (47%), Gaps = 34/360 (9%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
+ +VAGE SGD +G+ L +K+ P F GV G M+ +G + L+ ME+++VMG+ E
Sbjct: 8 IALVAGEASGDILGAGLRQQLKEHYP-NARFIGVAGPRMAAEGCEVLYSMEELSVMGLRE 66
Query: 94 LLPHI---YKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
+L + K R + + + A + V F L K+L+ + ++
Sbjct: 67 VLGRLGRLLKIRKEVVQLAKQA-----KPDLLVGIDAPDFNLTKELKKKDPGIKI----- 116
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
+Y++P WAW+ + R K + D +L ILP E+A + + FVGHP+++
Sbjct: 117 IYYISPQVWAWR--KWRAKKIEKATDFLLAILPFEKAFYQKKNVPCRFVGHPLLD----- 169
Query: 211 NLGKGPEPCELKMEG-NSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ + + + + K + ++LLPGSR EV ++ P+F K +LL+
Sbjct: 170 ---------AIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE 220
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
P+L V+ V + + + P + + G + A A+ AL SGT
Sbjct: 221 QQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDGDARK---AMFAADAALLASGT 277
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
A+E L + P VV YR LT R K YISLPNIL + ++PE L + CTP L
Sbjct: 278 AALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPL 337
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 385 |
| >gnl|CDD|167141 PRK01021, lpxB, lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 2e-39
Identities = 108/355 (30%), Positives = 165/355 (46%), Gaps = 46/355 (12%)
Query: 35 FIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWEL 94
FI AGE SGD++G L+ +K L P + GVGG M +G LF ME+ V G WE+
Sbjct: 230 FISAGEHSGDTLGGNLLKEIKALYP-DIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEV 288
Query: 95 LPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYV 154
L ++K R ++ + L P V+ +D F F L+K+LR R ++ HYV
Sbjct: 289 LLALFKLWYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKI-----VHYV 343
Query: 155 APSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGK 214
PS WAW+ R L ++D +L ILP E+ + + + L ++GHP+VE
Sbjct: 344 CPSIWAWR--PKRKTILEKYLDLLLLILPFEQNLFKDSPLRTVYLGHPLVE--------- 392
Query: 215 GPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI---------FAKTV 265
+ + +K + +PS +++ PGSR ++ R L I A T
Sbjct: 393 -----TISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTH 447
Query: 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 325
+LL S A ++ + L Q+ + S +VP S +Y+ AL
Sbjct: 448 QLLVSS----------ANPKYDHLILEVLQQEGCLHSHIVP---SQFRYELMRECDCALA 494
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKI--PYISLPNILLDSPIIPE 378
GT+ +E L + P +V + + +Y KI P SLPNI+L S I PE
Sbjct: 495 KCGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPE 549
|
Length = 608 |
| >gnl|CDD|237606 PRK14089, PRK14089, ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 61/314 (19%)
Query: 78 KSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLR 137
L+ + ++MG ++LP ++ + +KE +E A + V+ +DS F+ L K+++
Sbjct: 40 NPLYDSREFSIMGFVDVLPKLFFAKKAIKEMVELA--KQADKVLLMDSSSFNIPLAKKIK 97
Query: 138 ARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAAT 197
Y + + +Y+ P WAWK G R K L + D + ILP E + AT
Sbjct: 98 KAYPKKEI-----IYYILPQVWAWKKG--RAKILEKYCDFLASILPFEVQFYQSK---AT 147
Query: 198 FVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM 257
+VGHP+++ E+K D + I+ +PGSR E+ R+
Sbjct: 148 YVGHPLLD--------------EIKEFKKDLDKEGT---------IAFMPGSRKSEIKRL 184
Query: 258 LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLK--YD 315
+PIF + + L+ E I V+ P+ + + G S + YD
Sbjct: 185 MPIFKELAKKLEG--KEKILVV---PSFFKGKDLKEIY-----------GDISEFEISYD 228
Query: 316 AFSA---SRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLD 372
A + A SGT +E L P V+AY+A + + + K+ +I L NI D
Sbjct: 229 THKALLEAEFAFICSGTATLEAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFD 288
Query: 373 ----SPIIPEALLQ 382
P+ PE LLQ
Sbjct: 289 FLGKEPLHPE-LLQ 301
|
Length = 347 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 394 | |||
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 100.0 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 100.0 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 100.0 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 100.0 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 100.0 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 100.0 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 100.0 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 100.0 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.96 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.95 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.91 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.86 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.83 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.71 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.7 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.66 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.64 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.62 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 99.62 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.6 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.59 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.57 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.56 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.56 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.54 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.54 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.54 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.52 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.5 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.5 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.49 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.49 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.49 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.48 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.47 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.47 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.47 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.47 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.47 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.46 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.46 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.45 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.45 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.44 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.44 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 99.44 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.43 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.42 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.41 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.4 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.4 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.38 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.38 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.38 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.37 | |
| PLN02316 | 1036 | synthase/transferase | 99.36 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.36 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.34 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.32 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.32 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.32 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.3 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.3 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.29 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.27 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.27 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.26 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.25 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.23 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.2 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.19 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.16 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.16 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.16 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 99.14 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.13 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.13 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.13 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.11 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 99.08 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.04 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.04 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.98 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 98.84 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.76 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.76 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.68 | |
| PLN00142 | 815 | sucrose synthase | 98.67 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.67 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 98.64 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 98.63 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.62 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 98.62 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.61 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 98.54 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 98.49 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 98.47 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 98.42 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 98.4 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 98.37 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 98.35 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.33 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 98.31 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 98.31 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 98.22 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 98.11 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 98.1 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 98.05 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.98 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.93 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 97.79 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.75 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 97.64 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.61 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.57 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.52 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.4 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 97.38 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 97.3 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 97.3 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 97.14 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 97.07 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 97.01 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 96.94 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 96.94 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 96.88 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 96.85 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 96.84 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 96.58 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 96.53 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 96.49 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 96.43 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 96.16 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.16 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.12 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 96.08 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.77 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 95.69 | |
| PLN00414 | 446 | glycosyltransferase family protein | 95.67 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 94.89 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 94.74 | |
| PLN02208 | 442 | glycosyltransferase family protein | 94.37 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 93.89 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 93.8 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 93.41 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 92.64 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 91.44 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 91.03 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 90.7 | |
| ), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844 | 100 | GARS_N: Phosphoribosylglycinamide synthetase, N do | 90.45 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 90.1 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 88.95 | |
| KOG3339 | 211 | consensus Predicted glycosyltransferase [General f | 88.55 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 87.88 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 87.34 | |
| TIGR00730 | 178 | conserved hypothetical protein, DprA/Smf-related, | 87.3 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 86.49 | |
| cd01917 | 287 | ACS_2 Acetyl-CoA synthase (ACS), also known as ace | 86.05 | |
| TIGR00725 | 159 | conserved hypothetical protein, DprA/Smf-related, | 86.02 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 85.99 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 85.9 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 84.47 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 84.31 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 81.41 | |
| TIGR00511 | 301 | ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e | 80.47 |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-77 Score=569.67 Aligned_cols=336 Identities=37% Similarity=0.620 Sum_probs=306.6
Q ss_pred CceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
++||+++|||.|||++++.|+++|+++.|+ ++|+|+||+.|+++|++++++++++++|||.|++++++++++..+++.+
T Consensus 1 ~~ki~i~AGE~SGDllGa~LikaLk~~~~~-~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~~~ 79 (381)
T COG0763 1 MLKIALSAGEASGDLLGAGLIKALKARYPD-VEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRRELVR 79 (381)
T ss_pred CceEEEEecccchhhHHHHHHHHHHhhCCC-eEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999996 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+.+.+||++|++|+|+||.++++++++.+ +++| ++||++||+|||+++ |+.++.+++|++++++|||+++|+
T Consensus 80 ~i~~~kpD~~i~IDsPdFnl~vak~lrk~~----p~i~-iihYV~PsVWAWr~~--Ra~~i~~~~D~lLailPFE~~~y~ 152 (381)
T COG0763 80 YILANKPDVLILIDSPDFNLRVAKKLRKAG----PKIK-IIHYVSPSVWAWRPK--RAVKIAKYVDHLLAILPFEPAFYD 152 (381)
T ss_pred HHHhcCCCEEEEeCCCCCchHHHHHHHHhC----CCCC-eEEEECcceeeechh--hHHHHHHHhhHeeeecCCCHHHHH
Confidence 999999999999999999999999999874 3589 589999999999987 999999999999999999999999
Q ss_pred hcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh
Q 016179 191 LNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270 (394)
Q Consensus 191 ~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~ 270 (394)
+.|.+++|+|||+.|... + ..+++.+|+++|++.++++|+++||||++||++++|.+.++++.+.+
T Consensus 153 k~g~~~~yVGHpl~d~i~-~-------------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~ 218 (381)
T COG0763 153 KFGLPCTYVGHPLADEIP-L-------------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA 218 (381)
T ss_pred hcCCCeEEeCChhhhhcc-c-------------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999863 1 24678899999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCC
Q 016179 271 SFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 271 ~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~ 348 (394)
+.|+++|++++.+. .++....+...... .+..+.+ .+.+++|.+||+++++|||+|||++++|+||||.|+++
T Consensus 219 ~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~a~~~aD~al~aSGT~tLE~aL~g~P~Vv~Yk~~ 293 (381)
T COG0763 219 RYPDLKFVLPLVNA-KYRRIIEEALKWEVAGLSLILID----GEKRKAFAAADAALAASGTATLEAALAGTPMVVAYKVK 293 (381)
T ss_pred hCCCceEEEecCcH-HHHHHHHHHhhccccCceEEecC----chHHHHHHHhhHHHHhccHHHHHHHHhCCCEEEEEecc
Confidence 99999999999864 33443333322211 2233333 47889999999999999999999999999999999999
Q ss_pred hHHHHHHHhhccCCccchhhhhcCCCCcccccCCCCCHHHHHHHh
Q 016179 349 FLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 349 ~~~~~~a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~~i~~~~ 393 (394)
++|++++|+++|+||+|||||++|++++|||||++|+|++|++++
T Consensus 294 ~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l 338 (381)
T COG0763 294 PITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARAL 338 (381)
T ss_pred HHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHH
Confidence 999999999999999999999999999999999999999999876
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-77 Score=582.54 Aligned_cols=334 Identities=37% Similarity=0.653 Sum_probs=302.8
Q ss_pred EEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHH
Q 016179 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAAL 113 (394)
Q Consensus 34 IlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~ 113 (394)
|+|+|||.|||+||+.|+++|++++|+ ++++|+||++|+++|++.++|+.+++++|+.|++++++.+++.++++.+.++
T Consensus 1 I~i~AGE~SGD~~ga~Li~~Lk~~~p~-~~~~GvGG~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~ 79 (373)
T PF02684_consen 1 IFISAGEASGDLHGARLIRALKARDPD-IEFYGVGGPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIK 79 (373)
T ss_pred CEEEeeCccHHHHHHHHHHHHHhhCCC-cEEEEEechHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999996 9999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHhcC
Q 016179 114 LFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNG 193 (394)
Q Consensus 114 ~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~~g 193 (394)
+++||+||++|||+||+++|+++|+++. .+| ++||++||+|||++| |++++++++|+++|+||||.++|+++|
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~----~~~-viyYI~PqvWAWr~~--R~~~i~~~~D~ll~ifPFE~~~y~~~g 152 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGI----PIK-VIYYISPQVWAWRPG--RAKKIKKYVDHLLVIFPFEPEFYKKHG 152 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCC----Cce-EEEEECCceeeeCcc--HHHHHHHHHhheeECCcccHHHHhccC
Confidence 9999999999999999999999998732 344 589999999999988 999999999999999999999999999
Q ss_pred CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCC
Q 016179 194 LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273 (394)
Q Consensus 194 ~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~ 273 (394)
++++|||||+.|.+.. ..++...++++ +++++++|++|||||.+||++++|.|+++++.+.+++|
T Consensus 153 ~~~~~VGHPl~d~~~~--------------~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p 217 (373)
T PF02684_consen 153 VPVTYVGHPLLDEVKP--------------EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRP 217 (373)
T ss_pred CCeEEECCcchhhhcc--------------CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999998753 12456677777 99999999999999999999999999999999999999
Q ss_pred CeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCChHHHH
Q 016179 274 ELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEW 353 (394)
Q Consensus 274 ~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~~~~~~ 353 (394)
+++|+++++++. .++.+++.......++.+... .++.+++|++||+++++|||+|+|++++|+||||+|+++++||+
T Consensus 218 ~l~fvvp~a~~~-~~~~i~~~~~~~~~~~~~~~~--~~~~~~~m~~ad~al~~SGTaTLE~Al~g~P~Vv~Yk~~~lt~~ 294 (373)
T PF02684_consen 218 DLQFVVPVAPEV-HEELIEEILAEYPPDVSIVII--EGESYDAMAAADAALAASGTATLEAALLGVPMVVAYKVSPLTYF 294 (373)
T ss_pred CeEEEEecCCHH-HHHHHHHHHHhhCCCCeEEEc--CCchHHHHHhCcchhhcCCHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 999999998743 344455544443333333322 24789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCccchhhhhcCCCCcccccCCCCCHHHHHHHh
Q 016179 354 FIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 354 ~a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~~i~~~~ 393 (394)
++|+++|++|+||||||+|++++|||||++||+++|++++
T Consensus 295 iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 295 IAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred HHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999876
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-73 Score=575.67 Aligned_cols=333 Identities=32% Similarity=0.573 Sum_probs=299.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEA 111 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~ 111 (394)
-||+|+|||.|||+||+.++++|+++.|+ +++.|+||++|+++|++..+|+++++++|+.|++++++++++.++++.+.
T Consensus 227 ~kIfI~AGE~SGDlhgA~Li~aLk~~~P~-i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~~l~~~~~~l~~~ 305 (608)
T PRK01021 227 TSCFISAGEHSGDTLGGNLLKEIKALYPD-IHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALFKLWYRYRKLYKT 305 (608)
T ss_pred CeEEEEeccccHHHHHHHHHHHHHhcCCC-cEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999996 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHh
Q 016179 112 ALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRL 191 (394)
Q Consensus 112 i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~ 191 (394)
+++++||++|++|||+||+++|+++|+++. ++| ++||++||+|||++| |++++++++|+++|+||||+++|++
T Consensus 306 i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi----~ip-viyYVsPqVWAWR~~--Rikki~k~vD~ll~IfPFE~~~y~~ 378 (608)
T PRK01021 306 ILKTNPRTVICIDFPDFHFLLIKKLRKRGY----KGK-IVHYVCPSIWAWRPK--RKTILEKYLDLLLLILPFEQNLFKD 378 (608)
T ss_pred HHhcCCCEEEEeCCCCCCHHHHHHHHhcCC----CCC-EEEEECccceeeCcc--hHHHHHHHhhhheecCccCHHHHHh
Confidence 999999999999999999999999987721 259 589999999999988 9999999999999999999999999
Q ss_pred cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHH--Hhh
Q 016179 192 NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE--LLK 269 (394)
Q Consensus 192 ~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~--~l~ 269 (394)
+|++++|||||+.|.+.. ..++++.++++|++++.++|+++||||.+||++++|.++++++ .+.
T Consensus 379 ~gv~v~yVGHPL~d~i~~--------------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~ 444 (608)
T PRK01021 379 SPLRTVYLGHPLVETISS--------------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA 444 (608)
T ss_pred cCCCeEEECCcHHhhccc--------------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998641 1356778999999989999999999999999999999999998 554
Q ss_pred hhCCCeEEEEEeCCCcChHHHHHHHhhcCC-CCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCC
Q 016179 270 DSFPELITVIHVAPNRHVENYITGLIQKWP-VPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 270 ~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~ 348 (394)
+ +++++++.++.. .++.+++..++++ .+++++.+ ++-+++|++||+++++|||+|+|++++|+|||++|+++
T Consensus 445 ~---~l~fvvp~a~~~-~~~~i~~~~~~~~~~~~~ii~~---~~~~~~m~aaD~aLaaSGTaTLEaAL~g~PmVV~YK~s 517 (608)
T PRK01021 445 S---THQLLVSSANPK-YDHLILEVLQQEGCLHSHIVPS---QFRYELMRECDCALAKCGTIVLETALNQTPTIVTCQLR 517 (608)
T ss_pred c---CeEEEEecCchh-hHHHHHHHHhhcCCCCeEEecC---cchHHHHHhcCeeeecCCHHHHHHHHhCCCEEEEEecC
Confidence 3 589999887643 3455666555444 24566643 23589999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcc--CCccchhhhhcCCCCccccc--CCCCCHHHHHHHh
Q 016179 349 FLTEWFIRYKAK--IPYISLPNILLDSPIIPEAL--LQACTPDTLTHLL 393 (394)
Q Consensus 349 ~~~~~~a~~~vk--~~~~~l~Nil~~~~i~pEli--q~~~~~~~i~~~~ 393 (394)
++||+++|+++| +||+|||||++|++++|||| |++||||+|++++
T Consensus 518 ~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l 566 (608)
T PRK01021 518 PFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL 566 (608)
T ss_pred HHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH
Confidence 999999999999 59999999999999999999 7999999999863
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-68 Score=515.30 Aligned_cols=309 Identities=27% Similarity=0.432 Sum_probs=271.9
Q ss_pred CceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
.|||+|+|||.|||+||+.++++|++ + ++++|+||++| ++..+++.+++++|+.|++++++++++.++++.+
T Consensus 1 ~~~i~i~aGE~SGD~~ga~l~~~l~~---~-~~~~G~GG~~m----~~~~~~~~~lsv~G~~evl~~~~~~~~~~~~~~~ 72 (347)
T PRK14089 1 MMKILVSALEPSANLHLKELLKNLPK---D-YELIGIFDKSL----GNPLYDSREFSIMGFVDVLPKLFFAKKAIKEMVE 72 (347)
T ss_pred CcEEEEEeccccHHHHHHHHHHHHhc---C-CEEEEEechHH----HHhcCChHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999987 4 99999999999 6788899999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+ ++||++|++|||+||+++|+++|+.+ +++| ++||++||+|||++| |++++++++|+++++||||.++|
T Consensus 73 ~~--~~pd~~i~iD~p~Fnl~lak~~k~~~----~~i~-viyyi~PqvWAWr~~--R~~~i~k~~d~vl~ifPFE~~~y- 142 (347)
T PRK14089 73 LA--KQADKVLLMDSSSFNIPLAKKIKKAY----PKKE-IIYYILPQVWAWKKG--RAKILEKYCDFLASILPFEVQFY- 142 (347)
T ss_pred Hh--cCCCEEEEeCCCCCCHHHHHHHHhcC----CCCC-EEEEECccceeeCcc--hHHHHHHHHhhhhccCCCCHHHh-
Confidence 84 79999999999999999999998763 2699 589999999999988 99999999999999999999998
Q ss_pred hcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh
Q 016179 191 LNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270 (394)
Q Consensus 191 ~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~ 270 (394)
|++++|||||++|.+.. . +.. ++ +.++|+++||||++|+++++|.++++++++.+
T Consensus 143 --g~~~~~VGhPl~d~~~~----------------~----~~~--~~-~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~ 197 (347)
T PRK14089 143 --QSKATYVGHPLLDEIKE----------------F----KKD--LD-KEGTIAFMPGSRKSEIKRLMPIFKELAKKLEG 197 (347)
T ss_pred --CCCCEEECCcHHHhhhh----------------h----hhh--cC-CCCEEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999997531 0 111 23 34799999999999999999999999999986
Q ss_pred hCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCChH
Q 016179 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 271 ~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
+. .++++++.++ . +.+++...++. .+.++ ++++++|++||++|++|||+|+|++++|+|||++|+++++
T Consensus 198 ~~--~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~-----~~~~~~m~~aDlal~~SGT~TLE~al~g~P~Vv~Yk~~~l 266 (347)
T PRK14089 198 KE--KILVVPSFFK--G-KDLKEIYGDIS-EFEIS-----YDTHKALLEAEFAFICSGTATLEAALIGTPFVLAYKAKAI 266 (347)
T ss_pred cC--cEEEEeCCCc--H-HHHHHHHhcCC-CcEEe-----ccHHHHHHhhhHHHhcCcHHHHHHHHhCCCEEEEEeCCHH
Confidence 53 6777776643 2 34455444432 34443 3678999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCccchhhhhcC----CCCcccccCCCCCHHHHHHHh
Q 016179 351 TEWFIRYKAKIPYISLPNILLD----SPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 351 ~~~~a~~~vk~~~~~l~Nil~~----~~i~pEliq~~~~~~~i~~~~ 393 (394)
+|+++|+++|+||+|+||||+| ++++|||+|++||+++|++++
T Consensus 267 ty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i 313 (347)
T PRK14089 267 DYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAY 313 (347)
T ss_pred HHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHH
Confidence 9999999999999999999999 999999999999999999876
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-64 Score=502.50 Aligned_cols=334 Identities=31% Similarity=0.517 Sum_probs=293.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEA 111 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~ 111 (394)
.||+|++||||||+++++++++|++++++ ++++|+||+.|+++|++..+++..++++|+.+.++.++++++.++++.++
T Consensus 6 ~ki~i~aGgtsGhi~paal~~~l~~~~~~-~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~~~~ 84 (385)
T TIGR00215 6 PTIALVAGEASGDILGAGLRQQLKEHYPN-ARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEVVQL 84 (385)
T ss_pred CeEEEEeCCccHHHHHHHHHHHHHhcCCC-cEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999955999999998886 99999999999999999889999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHh
Q 016179 112 ALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRL 191 (394)
Q Consensus 112 i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~ 191 (394)
+++++||+||++||++||+.++++++.+ ++|+ ++|++|++|+|+.+ |.+.+++++|+++++||++.+.|.+
T Consensus 85 l~~~kPd~vi~~g~~~~~~~~a~aa~~~------gip~-v~~i~P~~waw~~~--~~r~l~~~~d~v~~~~~~e~~~~~~ 155 (385)
T TIGR00215 85 AKQAKPDLLVGIDAPDFNLTKELKKKDP------GIKI-IYYISPQVWAWRKW--RAKKIEKATDFLLAILPFEKAFYQK 155 (385)
T ss_pred HHhcCCCEEEEeCCCCccHHHHHHHhhC------CCCE-EEEeCCcHhhcCcc--hHHHHHHHHhHhhccCCCcHHHHHh
Confidence 9999999999999999999998777655 7995 67889999999865 8778899999999999999999998
Q ss_pred cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh
Q 016179 192 NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271 (394)
Q Consensus 192 ~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~ 271 (394)
.|+++.+||||+++.+... ..++.+.|+++|++++.++|+++||||+++++++++.++++++.+.+.
T Consensus 156 ~g~~~~~vGnPv~~~~~~~-------------~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~ 222 (385)
T TIGR00215 156 KNVPCRFVGHPLLDAIPLY-------------KPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ 222 (385)
T ss_pred cCCCEEEECCchhhhcccc-------------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh
Confidence 8899999999999875421 124567788999999999999999999999988899999999999887
Q ss_pred CCCeEEEEEeCCCcChHHHHHHHhhcC--CCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCCh
Q 016179 272 FPELITVIHVAPNRHVENYITGLIQKW--PVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 272 ~~~~~~vi~~g~~~~~~~~l~~~~~~~--~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
.|+++++++.++... .+.+++....+ +.++.++. .+++++|++||++|++|||+|+|++++|+|+|++|++++
T Consensus 223 ~p~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~v~~~~----~~~~~~l~aADl~V~~SGt~tlEa~a~G~P~Vv~yk~~p 297 (385)
T TIGR00215 223 EPDLRRVLPVVNFKR-RLQFEQIKAEYGPDLQLHLID----GDARKAMFAADAALLASGTAALEAALIKTPMVVGYRMKP 297 (385)
T ss_pred CCCeEEEEEeCCchh-HHHHHHHHHHhCCCCcEEEEC----chHHHHHHhCCEEeecCCHHHHHHHHcCCCEEEEEcCCH
Confidence 888988776654322 23334433333 22344442 478999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCccchhhhhcCCCCcccccCCCCCHHHHHHHh
Q 016179 350 LTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 350 ~~~~~a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~~i~~~~ 393 (394)
++|+++|+++|++|+++||+++|++++||++|++||+++|++++
T Consensus 298 l~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~ 341 (385)
T TIGR00215 298 LTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIAL 341 (385)
T ss_pred HHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=388.19 Aligned_cols=334 Identities=38% Similarity=0.649 Sum_probs=287.4
Q ss_pred CceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
+|||+|++||||||++.+.++++|++.+++ ++++|+|++.|++.+++..+++..+++.|+.+.++.+..+.+.+.++.+
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 79 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAGLIRALKARAPN-LEFVGVGGPRMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKIRRRLKR 79 (380)
T ss_pred CceEEEEecCcCHHHHHHHHHHHHHhcCCC-cEEEEEccHHHHhCCCccccCHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999955599999988786 9999999989999998877888899999998888999899999999999
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
++++++||+|+++||++++..++..++++ ++|+ +++.+++.|+|.++ +++++.+.+|.+++.++++.+.+.
T Consensus 80 ~l~~~kPdivi~~~~~~~~~~~a~~a~~~------~ip~-i~~~~~~~~~~~~~--~~~~~~~~~d~i~~~~~~~~~~~~ 150 (380)
T PRK00025 80 RLLAEPPDVFIGIDAPDFNLRLEKKLRKA------GIPT-IHYVSPSVWAWRQG--RAFKIAKATDHVLALFPFEAAFYD 150 (380)
T ss_pred HHHHcCCCEEEEeCCCCCCHHHHHHHHHC------CCCE-EEEeCCchhhcCch--HHHHHHHHHhhheeCCccCHHHHH
Confidence 99999999999999877888777666544 7896 45568888998876 888889999999999999999998
Q ss_pred hcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh
Q 016179 191 LNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270 (394)
Q Consensus 191 ~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~ 270 (394)
+.|+++.++|||+++.+.. ..++.+.+++++++++.++|+++||||+++.+..++.++++++.+.+
T Consensus 151 ~~g~~~~~~G~p~~~~~~~--------------~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~ 216 (380)
T PRK00025 151 KLGVPVTFVGHPLADAIPL--------------LPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ 216 (380)
T ss_pred hcCCCeEEECcCHHHhccc--------------ccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999886421 12356678899999888999999999999888878899999999887
Q ss_pred hCCCeEEEEEeCCCcChHHHHHHHhhcC-CCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCCh
Q 016179 271 SFPELITVIHVAPNRHVENYITGLIQKW-PVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 271 ~~~~~~~vi~~g~~~~~~~~l~~~~~~~-~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
+.|++++++++++.. .++.+++...+. +.++.++. ++++++|++||++|++||++|+|++++|+|+|++|++++
T Consensus 217 ~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~aDl~v~~sG~~~lEa~a~G~PvI~~~~~~~ 291 (380)
T PRK00025 217 RYPDLRFVLPLVNPK-RREQIEEALAEYAGLEVTLLD----GQKREAMAAADAALAASGTVTLELALLKVPMVVGYKVSP 291 (380)
T ss_pred hCCCeEEEEecCChh-hHHHHHHHHhhcCCCCeEEEc----ccHHHHHHhCCEEEECccHHHHHHHHhCCCEEEEEccCH
Confidence 778899999887422 334455555555 45565543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCccchhhhhcCCCCcccccCCCCCHHHHHHHh
Q 016179 350 LTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 350 ~~~~~a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~~i~~~~ 393 (394)
+++.+++.+.+.++.+++|++++.+++||++|.+++++++++.+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i 335 (380)
T PRK00025 292 LTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARAL 335 (380)
T ss_pred HHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHH
Confidence 99999998888899999999999999999999999999998765
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=317.48 Aligned_cols=294 Identities=18% Similarity=0.247 Sum_probs=227.8
Q ss_pred EEEeCCchHHHHHHHHHHHHHhcCCC-CeE---EEEecChhhHhccCccccccCcceeccHH-----HhhhhHHH-HHHH
Q 016179 35 FIVAGEVSGDSIGSRLMSAMKKLAPL-PVS---FSGVGGSMMSEQGMKSLFPMEDIAVMGIW-----ELLPHIYK-FRVR 104 (394)
Q Consensus 35 lI~aG~~sGh~~a~~l~~~L~~~~~~-~~~---~~g~gg~~m~~~g~~~~~~~~~l~~~G~~-----~~l~~~~~-~~~~ 104 (394)
|++++|+|.|++|++|+++|+++.|+ ++. ++|.| ..+|+.+++...++..+++.|+. +.++.+++ +.+.
T Consensus 1 l~~snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~-~~~e~~~ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~ 79 (396)
T TIGR03492 1 LFLSNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEG-RAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGL 79 (396)
T ss_pred CcCCCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCC-HHHhhCCCceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHH
Confidence 46789999999999999999987665 244 44543 57898888865578888888875 56777777 8888
Q ss_pred HHHHHHHHHhc--CCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEE---EeecCcccccc------------CcchH
Q 016179 105 LKETIEAALLF--RPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF---HYVAPSFWAWK------------GGEAR 167 (394)
Q Consensus 105 ~~~~~~~i~~~--~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~---~yv~~~~wa~~------------~g~~r 167 (394)
..+..++++++ +||+|+++| +|...+++++. ++|+++ |+ ++..|... +| .
T Consensus 80 ~~~~~~~~~~~~~~p~~v~~~G--g~v~~~aA~~~--------~~p~~~~~~~e-sn~~~~~~~~~~~~~~~~~~~G--~ 146 (396)
T TIGR03492 80 TLGQWRALRKWAKKGDLIVAVG--DIVPLLFAWLS--------GKPYAFVGTAK-SDYYWESGPRRSPSDEYHRLEG--S 146 (396)
T ss_pred HHHHHHHHHHHhhcCCEEEEEC--cHHHHHHHHHc--------CCCceEEEeec-cceeecCCCCCccchhhhccCC--C
Confidence 99999999999 999999997 34445555543 789877 76 55553211 33 4
Q ss_pred H------HHH-HHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCC
Q 016179 168 L------KNL-AAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGA 240 (394)
Q Consensus 168 ~------~~l-~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~ 240 (394)
+ +++ +++||.+|+.++++.++|.++|++++|||||++|.+.. .++ .+++++.
T Consensus 147 ~~~p~e~n~l~~~~a~~v~~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~---------------~~~------~~l~~~~ 205 (396)
T TIGR03492 147 LYLPWERWLMRSRRCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEP---------------PER------KPLLTGR 205 (396)
T ss_pred ccCHHHHHHhhchhhCEEeCCCHHHHHHHHHCCCeEEEeCcCHHhcCcc---------------ccc------cccCCCC
Confidence 4 554 89999999999999999999999999999999998642 111 1667788
Q ss_pred cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC----------------CEEE
Q 016179 241 TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV----------------PSIL 304 (394)
Q Consensus 241 ~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~----------------~v~~ 304 (394)
++|+++||||++|+.+.+|.++++++.+.++ ++++|+++++++.+.+ .+++.+.+.+. ++.+
T Consensus 206 ~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 206 FRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLSLE-KLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred CEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCCHH-HHHHHHHhcCceecCCccccchhhccCceEE
Confidence 9999999999999888899999999999766 7899999997655543 34444432221 1445
Q ss_pred ecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEE-cCChHHHHHHHhhccC--Cccchh
Q 016179 305 VPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAY-RAHFLTEWFIRYKAKI--PYISLP 367 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y-~~~~~~~~~a~~~vk~--~~~~l~ 367 (394)
..+ .++|+++|++||++|++|||+|+|++++|+|+|++| +.+++|+.++++..+. .++.++
T Consensus 284 ~~~--~~~~~~~l~~ADlvI~rSGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~ 347 (396)
T TIGR03492 284 LLG--RGAFAEILHWADLGIAMAGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLA 347 (396)
T ss_pred Eec--hHhHHHHHHhCCEEEECcCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecC
Confidence 444 468999999999999999999999999999999997 9999998887765443 455544
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=306.92 Aligned_cols=302 Identities=12% Similarity=0.118 Sum_probs=217.0
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC-hhhHhccCcc-ccccCcceeccHH-----HhhhhHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG-SMMSEQGMKS-LFPMEDIAVMGIW-----ELLPHIYKFRV 103 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg-~~m~~~g~~~-~~~~~~l~~~G~~-----~~l~~~~~~~~ 103 (394)
+||+|++||||||++ |.+++++|++++. ++..+|. ..++...++. .+++..++..|+. ..++.+.++.+
T Consensus 2 ~~i~~~~GGTGGHi~Pala~a~~l~~~g~---~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPYLKEDNW---DISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHHHhCCC---EEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 579999999999999 9999999998544 4444443 3566554443 2444445444432 34556666777
Q ss_pred HHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHH-HHhhhheeec
Q 016179 104 RLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNL-AAFVDHILCI 181 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l-~~~~d~v~~~ 181 (394)
...++.+++++++||+|+++| |.++|..+++++. ++|+++|+ ++. .+| ++|++ ++++|++++.
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~--------~~p~~i~e-~n~----~~g--~~nr~~~~~a~~v~~~ 143 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLN--------RVPVLLHE-SDM----TPG--LANKIALRFASKIFVT 143 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHc--------CCCEEEEC-CCC----Ccc--HHHHHHHHhhCEEEEE
Confidence 888999999999999999997 7778888887765 78988776 554 356 88875 9999999999
Q ss_pred CcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhhHHH
Q 016179 182 LPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARMLPI 260 (394)
Q Consensus 182 ~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~l~~ 260 (394)
||...+.+.+ .++++||+|+|+.+.. .++++.++.+++++++++||++|||+|+. +++.
T Consensus 144 f~~~~~~~~~--~k~~~tG~Pvr~~~~~---------------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~--- 203 (352)
T PRK12446 144 FEEAAKHLPK--EKVIYTGSPVREEVLK---------------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINET--- 203 (352)
T ss_pred ccchhhhCCC--CCeEEECCcCCccccc---------------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHH---
Confidence 9887666642 3578999999998742 23456677899999999999999999974 5554
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCC
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARL 339 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~ 339 (394)
+.+++..+. .+++++++||.+ ++++.... .. ++.++ +|..++|+++|++||++||++|++|+ |++++|+
T Consensus 204 ~~~~l~~l~---~~~~vv~~~G~~-~~~~~~~~----~~-~~~~~-~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~ 273 (352)
T PRK12446 204 VREALPELL---LKYQIVHLCGKG-NLDDSLQN----KE-GYRQF-EYVHGELPDILAITDFVISRAGSNAIFEFLTLQK 273 (352)
T ss_pred HHHHHHhhc---cCcEEEEEeCCc-hHHHHHhh----cC-CcEEe-cchhhhHHHHHHhCCEEEECCChhHHHHHHHcCC
Confidence 334444443 248999999975 34443322 11 33444 33236899999999999999999997 9999999
Q ss_pred CEEEEEcC-ChH-HHHH--HHhhccCCccchhhhhcCCCCcccccCCCCCHHHHHHHh
Q 016179 340 PCVVAYRA-HFL-TEWF--IRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393 (394)
Q Consensus 340 P~Iv~y~~-~~~-~~~~--a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~~i~~~~ 393 (394)
|+|++.-. ... .++. +++ +.+..+.+++.|+++++++|.+.+
T Consensus 274 P~I~iP~~~~~~~~~Q~~Na~~------------l~~~g~~~~l~~~~~~~~~l~~~l 319 (352)
T PRK12446 274 PMLLIPLSKFASRGDQILNAES------------FERQGYASVLYEEDVTVNSLIKHV 319 (352)
T ss_pred CEEEEcCCCCCCCchHHHHHHH------------HHHCCCEEEcchhcCCHHHHHHHH
Confidence 99987211 111 1222 333 334777888888888888887654
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=292.94 Aligned_cols=282 Identities=15% Similarity=0.192 Sum_probs=203.6
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC-hhhHhccCcc-ccccCcceeccH-----HHhhhhHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG-SMMSEQGMKS-LFPMEDIAVMGI-----WELLPHIYKFRV 103 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg-~~m~~~g~~~-~~~~~~l~~~G~-----~~~l~~~~~~~~ 103 (394)
|+|++++||||||++ |.+++++|.+++. + ++.+.|. ..|++.-.+. ..++..+++.++ ...++...++++
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~-~-~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGW-E-QVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLK 78 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCc-c-EEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHHHHH
Confidence 578999999999999 9999999999876 2 5555543 4565544432 233444444443 345666778899
Q ss_pred HHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HHHhhhheeec
Q 016179 104 RLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LAAFVDHILCI 181 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~~~~d~v~~~ 181 (394)
.+.++.+++++++||+|+++| |+..|..+|+.+. ++|+++|+ ++. .+| ++|+ ++++++.+++.
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~--------~iPv~ihE-qn~----~~G--~ank~~~~~a~~V~~~ 143 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLL--------GIPVIIHE-QNA----VPG--LANKILSKFAKKVASA 143 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhC--------CCCEEEEe-cCC----Ccc--hhHHHhHHhhceeeec
Confidence 999999999999999999997 7888988887753 79998887 555 466 8877 49999999999
Q ss_pred CcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhhHHH
Q 016179 182 LPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARMLPI 260 (394)
Q Consensus 182 ~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~l~~ 260 (394)
|+.......+ .++++||+|+++++.+ . .....+.... .++++|+++|||+|+. +++.
T Consensus 144 f~~~~~~~~~--~~~~~tG~Pvr~~~~~-~--------------~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~--- 201 (357)
T COG0707 144 FPKLEAGVKP--ENVVVTGIPVRPEFEE-L--------------PAAEVRKDGR--LDKKTILVTGGSQGAKALNDL--- 201 (357)
T ss_pred cccccccCCC--CceEEecCcccHHhhc-c--------------chhhhhhhcc--CCCcEEEEECCcchhHHHHHH---
Confidence 9873332221 2488999999998863 1 1122222222 2789999999999985 4554
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCC
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARL 339 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~ 339 (394)
+.+++..+.+ +++++++||++. +++ +.....+.+. +++.++ .+||.++|++||++|||||++|+ |++++|+
T Consensus 202 v~~~~~~l~~---~~~v~~~~G~~~-~~~-~~~~~~~~~~-~~v~~f--~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~ 273 (357)
T COG0707 202 VPEALAKLAN---RIQVIHQTGKND-LEE-LKSAYNELGV-VRVLPF--IDDMAALLAAADLVISRAGALTIAELLALGV 273 (357)
T ss_pred HHHHHHHhhh---CeEEEEEcCcch-HHH-HHHHHhhcCc-EEEeeH--HhhHHHHHHhccEEEeCCcccHHHHHHHhCC
Confidence 4455555543 699999999864 444 4444444443 666654 58999999999999999999999 9999999
Q ss_pred CEEEEEcCCh---HHHHHHHhhcc
Q 016179 340 PCVVAYRAHF---LTEWFIRYKAK 360 (394)
Q Consensus 340 P~Iv~y~~~~---~~~~~a~~~vk 360 (394)
|+|+++..+. -.+.=|+.+.+
T Consensus 274 P~IliP~p~~~~~~Q~~NA~~l~~ 297 (357)
T COG0707 274 PAILVPYPPGADGHQEYNAKFLEK 297 (357)
T ss_pred CEEEeCCCCCccchHHHHHHHHHh
Confidence 9998754443 22223676664
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=240.26 Aligned_cols=267 Identities=9% Similarity=0.146 Sum_probs=175.8
Q ss_pred CCceEEEEeCC-chHHHH-HHHHHHHHHhcCCCCeEE--EEe---cChhhHhccCccccccCcceeccHHHhhhhHHHHH
Q 016179 30 GELRVFIVAGE-VSGDSI-GSRLMSAMKKLAPLPVSF--SGV---GGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 30 ~~~kIlI~aG~-~sGh~~-a~~l~~~L~~~~~~~~~~--~g~---gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
..|||||.+++ ++||.+ |.+|.++|.++.++++++ +.. .++.+... ...+|...+++.+.++
T Consensus 4 ~~~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------~~~~Y~~~~~~~p~~y 72 (391)
T PRK13608 4 QNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSI-----------CKKWYINSFKYFRNMY 72 (391)
T ss_pred CCceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHH-----------HHHHHHHHHHHhHHHH
Confidence 56789998888 668999 557999998775421332 221 12222111 1112222222222211
Q ss_pred ------------------HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeE---EEeecCccccc
Q 016179 103 ------------------VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH---FHYVAPSFWAW 161 (394)
Q Consensus 103 ------------------~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~---~~yv~~~~wa~ 161 (394)
..+.++.+++++++||+||++ +|.. .+..+++... .++|++ ++|..++.|.+
T Consensus 73 ~~~y~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~-~p~~---~~~~l~~~~~---~~iP~~~v~td~~~~~~w~~ 145 (391)
T PRK13608 73 KGFYYSRPDKLDKCFYKYYGLNKLINLLIKEKPDLILLT-FPTP---VMSVLTEQFN---INIPVATVMTDYRLHKNWIT 145 (391)
T ss_pred HHHHHcCchhhHHHHHHHHHHHHHHHHHHHhCcCEEEEC-CcHH---HHHHHHHhcC---CCCCEEEEeCCCCccccccc
Confidence 134678899999999999986 4422 2334443322 168864 33444555655
Q ss_pred cCcchHHHHHHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCC
Q 016179 162 KGGEARLKNLAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPS 238 (394)
Q Consensus 162 ~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~ 238 (394)
+ .+|++++.++..++.+.+.|++ +.++|+|+++.|.+ ..++.+.++++|+++
T Consensus 146 ~-----------~~d~~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~--------------~~~~~~~~~~~~l~~ 200 (391)
T PRK13608 146 P-----------YSTRYYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFET--------------PIDQKQWLIDNNLDP 200 (391)
T ss_pred C-----------CCCEEEECCHHHHHHHHHcCCCHHHEEEECeecChHhcc--------------cccHHHHHHHcCCCC
Confidence 3 6999999999999999888875 67899999887642 123556778899999
Q ss_pred CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHH
Q 016179 239 GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFS 318 (394)
Q Consensus 239 ~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 318 (394)
+.++|++++||+|.. +.+..+++++ .+..+++++++++|++..+.+.+++.... ..++.++ || .++|+++|+
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~---~~~~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~-G~-~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDI---LAKSANAQVVMICGKSKELKRSLTAKFKS-NENVLIL-GY-TKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHH---HhcCCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEE-ec-cchHHHHHH
Confidence 999999999999831 1233344442 23346789989988764333334433322 2256655 55 589999999
Q ss_pred HcccceehhhHHHH-HHHHcCCCEEEEEcC
Q 016179 319 ASRVALCTSGTVAV-ELQLARLPCVVAYRA 347 (394)
Q Consensus 319 ~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~ 347 (394)
+||++|+++|+.|+ ||+++|+|+|++.+.
T Consensus 273 ~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~ 302 (391)
T PRK13608 273 SSQLMITKPGGITISEGLARCIPMIFLNPA 302 (391)
T ss_pred hhhEEEeCCchHHHHHHHHhCCCEEECCCC
Confidence 99999999999997 999999999986544
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-27 Score=231.75 Aligned_cols=277 Identities=13% Similarity=0.148 Sum_probs=177.5
Q ss_pred CCCceEEEEeCCch-HHHH-HHHHHHHHHhcCCCCeEEEEec----ChhhHhccCcccc--ccCc-ceeccHH----H--
Q 016179 29 DGELRVFIVAGEVS-GDSI-GSRLMSAMKKLAPLPVSFSGVG----GSMMSEQGMKSLF--PMED-IAVMGIW----E-- 93 (394)
Q Consensus 29 ~~~~kIlI~aG~~s-Gh~~-a~~l~~~L~~~~~~~~~~~g~g----g~~m~~~g~~~~~--~~~~-l~~~G~~----~-- 93 (394)
.+.|||+|.++++| ||.. |.+|+++|++++++ +.++.-. ++.+... ....| .... -...++. +
T Consensus 2 ~~~~rili~t~~~G~GH~~~a~al~~~l~~~g~~-~~~~~d~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~ 79 (380)
T PRK13609 2 IKNPKVLILTAHYGNGHVQVAKTLEQTFRQKGIK-DVIVCDLFGESHPVITEI-TKYLYLKSYTIGKELYRLFYYGVEKI 79 (380)
T ss_pred CCCCeEEEEEcCCCchHHHHHHHHHHHHHhcCCC-cEEEEEhHHhcchHHHHH-HHHHHHHHHHHhHHHHHHHHhccCcc
Confidence 35789999988855 9999 77899999987664 3333211 1111110 00000 0000 0000100 0
Q ss_pred -hhhhHH-HHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEE---EeecCccccccCcchHH
Q 016179 94 -LLPHIY-KFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF---HYVAPSFWAWKGGEARL 168 (394)
Q Consensus 94 -~l~~~~-~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~---~yv~~~~wa~~~g~~r~ 168 (394)
...... .......++.+++++++||+||++ +|.+++..+++ ... .++|++. +|..+..|.|+
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~-~~~~~~~~~~~---~~~---~~ip~~~~~td~~~~~~~~~~------ 146 (380)
T PRK13609 80 YDKKIFSWYANFGRKRLKLLLQAEKPDIVINT-FPIIAVPELKK---QTG---ISIPTYNVLTDFCLHKIWVHR------ 146 (380)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCcCEEEEc-ChHHHHHHHHH---hcC---CCCCeEEEeCCCCCCcccccC------
Confidence 000111 112235778999999999999985 55455443322 211 1688531 34455667664
Q ss_pred HHHHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEE
Q 016179 169 KNLAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISL 245 (394)
Q Consensus 169 ~~l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Ill 245 (394)
.+|++++.++..++.+.+.|++ +.++|+|+.+.+.. ..++...++++|++++++++++
T Consensus 147 -----~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~--------------~~~~~~~~~~~~l~~~~~~il~ 207 (380)
T PRK13609 147 -----EVDRYFVATDHVKKVLVDIGVPPEQVVETGIPIRSSFEL--------------KINPDIIYNKYQLCPNKKILLI 207 (380)
T ss_pred -----CCCEEEECCHHHHHHHHHcCCChhHEEEECcccChHHcC--------------cCCHHHHHHHcCCCCCCcEEEE
Confidence 5899999999999999888874 77899999876642 1234567889999998899999
Q ss_pred ECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHccccee
Q 016179 246 LPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 325 (394)
Q Consensus 246 lgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~ 325 (394)
+||+++.. +.+..++++ +.+ .+++++++++|++...++.+++...+.+.+++++ |+ .++++++|++||++|+
T Consensus 208 ~~G~~~~~--k~~~~li~~---l~~-~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~-g~-~~~~~~l~~~aD~~v~ 279 (380)
T PRK13609 208 MAGAHGVL--GNVKELCQS---LMS-VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVF-GY-VENIDELFRVTSCMIT 279 (380)
T ss_pred EcCCCCCC--cCHHHHHHH---Hhh-CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEE-ec-hhhHHHHHHhccEEEe
Confidence 99999842 223334443 333 3679999888865434455655555444467777 55 5789999999999999
Q ss_pred hhhHHHH-HHHHcCCCEEEEEcC
Q 016179 326 TSGTVAV-ELQLARLPCVVAYRA 347 (394)
Q Consensus 326 ~SGt~tl-Ea~a~G~P~Iv~y~~ 347 (394)
++|+.|+ ||+++|+|+|+..+.
T Consensus 280 ~~gg~t~~EA~a~g~PvI~~~~~ 302 (380)
T PRK13609 280 KPGGITLSEAAALGVPVILYKPV 302 (380)
T ss_pred CCCchHHHHHHHhCCCEEECCCC
Confidence 9999997 999999998764333
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-25 Score=215.51 Aligned_cols=266 Identities=19% Similarity=0.265 Sum_probs=174.7
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhh------HhccCccc-cccCcceeccHHHhhhhHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMM------SEQGMKSL-FPMEDIAVMGIWELLPHIYKFRV 103 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m------~~~g~~~~-~~~~~l~~~G~~~~l~~~~~~~~ 103 (394)
|||+|++||+|||++ +..++++|.+++.+ +.+++ ++.. +..|++.. .+.......++.+.++....++.
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~e-V~vv~--~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~ 77 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVE-VLWLG--TKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLK 77 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCE-EEEEe--CCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHH
Confidence 689999999999999 55899999987664 66654 2221 12233321 12222222345567777777788
Q ss_pred HHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHH-HHHHHhhhheeec
Q 016179 104 RLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARL-KNLAAFVDHILCI 181 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~-~~l~~~~d~v~~~ 181 (394)
.+.++.+++++++||+|++++ ++.+...+++++. ++|++ ++. |.+.++ +. +.+.+.+|++++.
T Consensus 78 ~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~--------~~p~v-~~~----~~~~~~--~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 78 AVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLL--------GIPLF-HHE----QNAVPG--LTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHc--------CCCEE-EEC----CCCCcc--HHHHHHHHHhCeeEEC
Confidence 888999999999999999874 2222233332221 67864 432 222333 45 3467889999999
Q ss_pred CcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHH
Q 016179 182 LPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261 (394)
Q Consensus 182 ~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~l 261 (394)
++++++.+ +..++|||+.+.+... . ..+++++++++.++|+++||+++.+. +...+
T Consensus 143 ~~~~~~~~-----~~~~i~n~v~~~~~~~---------------~--~~~~~~~~~~~~~~i~~~gg~~~~~~--~~~~l 198 (348)
T TIGR01133 143 FPGAKDHF-----EAVLVGNPVRQEIRSL---------------P--VPRERFGLREGKPTILVLGGSQGAKI--LNELV 198 (348)
T ss_pred chhHhhcC-----CceEEcCCcCHHHhcc---------------c--chhhhcCCCCCCeEEEEECCchhHHH--HHHHH
Confidence 99887665 3478999997765321 1 11346788888899999999998642 22234
Q ss_pred HHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCC
Q 016179 262 AKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLP 340 (394)
Q Consensus 262 l~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P 340 (394)
.++++.+.+ ++.++++++|++. . +.+++...+.+.. ..+. +...+++++|++||++|++||+.|+ |++++|+|
T Consensus 199 ~~a~~~l~~--~~~~~~~~~g~~~-~-~~l~~~~~~~~l~-~~v~-~~~~~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~P 272 (348)
T TIGR01133 199 PKALAKLAE--KGIQIVHQTGKND-L-EKVKNVYQELGIE-AIVT-FIDENMAAAYAAADLVISRAGASTVAELAAAGVP 272 (348)
T ss_pred HHHHHHHhh--cCcEEEEECCcch-H-HHHHHHHhhCCce-EEec-CcccCHHHHHHhCCEEEECCChhHHHHHHHcCCC
Confidence 567777754 3567766666542 3 4455555554432 1221 1123899999999999999998887 99999999
Q ss_pred EEEEE
Q 016179 341 CVVAY 345 (394)
Q Consensus 341 ~Iv~y 345 (394)
+|++.
T Consensus 273 vv~~~ 277 (348)
T TIGR01133 273 AILIP 277 (348)
T ss_pred EEEee
Confidence 99864
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-24 Score=213.14 Aligned_cols=206 Identities=14% Similarity=0.196 Sum_probs=143.2
Q ss_pred HHHHHHHHhcCCCEEEEeCCCC---chHHHHHHHHHhccccCCCCCeEE---Ee-ecCccccccCcchHHHHHHHhhhhe
Q 016179 106 KETIEAALLFRPHAVVTVDSKG---FSFRLLKQLRARYSHERLNGPAHF---HY-VAPSFWAWKGGEARLKNLAAFVDHI 178 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~---f~~~la~~l~~~~~~~~~~ip~~~---~y-v~~~~wa~~~g~~r~~~l~~~~d~v 178 (394)
.++.++|++++||+|+++ +|. +++.+++.+++... .++|+++ ++ ..+..|. .+.+|.+
T Consensus 90 ~~l~~~i~~~~pDvIi~t-hp~~~~~~~~~l~~~~~~~~---~~~p~~~~~tD~~~~~~~w~-----------~~~~d~~ 154 (382)
T PLN02605 90 REVAKGLMKYKPDIIVSV-HPLMQHVPLRVLRWQGKELG---KKIPFTTVVTDLGTCHPTWF-----------HKGVTRC 154 (382)
T ss_pred HHHHHHHHhcCcCEEEEe-CcCcccCHHHHHHHHhhccC---CCCCEEEEECCCCCcCcccc-----------cCCCCEE
Confidence 567789999999999997 432 24555555442211 2678543 22 1233343 3479999
Q ss_pred eecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 179 LCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 179 ~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
++.++..++.+.++|++ ++++|+|+.+.+... ..+++++|+++|++++.++|+++||+.|..
T Consensus 155 ~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~-------------~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~-- 219 (382)
T PLN02605 155 FCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARA-------------VRPKDELRRELGMDEDLPAVLLMGGGEGMG-- 219 (382)
T ss_pred EECCHHHHHHHHHcCCCHHHEEEECcccCHhhccC-------------CCCHHHHHHHcCCCCCCcEEEEECCCcccc--
Confidence 99999999888888875 788999998766421 134677899999999999999999999842
Q ss_pred hhHHHHHHHHHHhh----hhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHH
Q 016179 256 RMLPIFAKTVELLK----DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331 (394)
Q Consensus 256 ~~l~~ll~a~~~l~----~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~t 331 (394)
. +..+++++..+. ...++.++++++|.+..+++.+++. ..+.+++++ |+ .++|+++|++||++|++||+.|
T Consensus 220 ~-~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~--~~~~~v~~~-G~-~~~~~~l~~aaDv~V~~~g~~t 294 (382)
T PLN02605 220 P-LEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESR--DWKIPVKVR-GF-VTNMEEWMGACDCIITKAGPGT 294 (382)
T ss_pred c-HHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhh--cccCCeEEE-ec-cccHHHHHHhCCEEEECCCcch
Confidence 2 223344444322 1135688888888764444444432 223356655 55 5899999999999999999988
Q ss_pred H-HHHHcCCCEEEEEc
Q 016179 332 V-ELQLARLPCVVAYR 346 (394)
Q Consensus 332 l-Ea~a~G~P~Iv~y~ 346 (394)
+ ||++||+|+|+...
T Consensus 295 i~EAma~g~PvI~~~~ 310 (382)
T PLN02605 295 IAEALIRGLPIILNGY 310 (382)
T ss_pred HHHHHHcCCCEEEecC
Confidence 7 99999999998654
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-23 Score=202.04 Aligned_cols=270 Identities=19% Similarity=0.246 Sum_probs=174.9
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChh----hHhccCccc-cccCcceeccHHHhhhhHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSM----MSEQGMKSL-FPMEDIAVMGIWELLPHIYKFRVRL 105 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~----m~~~g~~~~-~~~~~l~~~G~~~~l~~~~~~~~~~ 105 (394)
|||+|+++|.|||.+ +..++++|++++.+ +.+++..+.. .++.|++.. ++...+.-.+....++....+...+
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~e-v~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 80 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWE-VLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKGV 80 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCE-EEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHHH
Confidence 899999999999999 77999999987664 6666554311 122233321 1111111122345566677778888
Q ss_pred HHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HHHhhhheeecCc
Q 016179 106 KETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LAAFVDHILCILP 183 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~~~~d~v~~~~p 183 (394)
.++.+++++++||+|++++ ++.+...++++. . ++|++.+. .. +.++ +.++ +.+.+|.+++.++
T Consensus 81 ~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~--~------~~p~v~~~--~~---~~~~--~~~r~~~~~~d~ii~~~~ 145 (357)
T PRK00726 81 LQARKILKRFKPDVVVGFGGYVSGPGGLAARL--L------GIPLVIHE--QN---AVPG--LANKLLARFAKKVATAFP 145 (357)
T ss_pred HHHHHHHHhcCCCEEEECCCcchhHHHHHHHH--c------CCCEEEEc--CC---CCcc--HHHHHHHHHhchheECch
Confidence 8999999999999999986 333333333222 1 67864432 22 2233 5555 5778999999887
Q ss_pred ccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHH
Q 016179 184 NEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 263 (394)
Q Consensus 184 ~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~ 263 (394)
.... ...+.+++++|||+.++... + ...+.+++++++.++|+++||+++.+- ....+.+
T Consensus 146 ~~~~--~~~~~~i~vi~n~v~~~~~~--~---------------~~~~~~~~~~~~~~~i~~~gg~~~~~~--~~~~l~~ 204 (357)
T PRK00726 146 GAFP--EFFKPKAVVTGNPVREEILA--L---------------AAPPARLAGREGKPTLLVVGGSQGARV--LNEAVPE 204 (357)
T ss_pred hhhh--ccCCCCEEEECCCCChHhhc--c---------------cchhhhccCCCCCeEEEEECCcHhHHH--HHHHHHH
Confidence 4421 12334689999999876532 0 112245677778889999999987542 2233447
Q ss_pred HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEE
Q 016179 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCV 342 (394)
Q Consensus 264 a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~I 342 (394)
+++++.+. + ..++++|... .++ +.+... .+.++.+. ++ .++++++|++||++|+.||+.|+ |++++|+|+|
T Consensus 205 a~~~~~~~-~--~~~~~~G~g~-~~~-~~~~~~-~~~~v~~~-g~-~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv 276 (357)
T PRK00726 205 ALALLPEA-L--QVIHQTGKGD-LEE-VRAAYA-AGINAEVV-PF-IDDMAAAYAAADLVICRAGASTVAELAAAGLPAI 276 (357)
T ss_pred HHHHhhhC-c--EEEEEcCCCc-HHH-HHHHhh-cCCcEEEe-eh-HhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEE
Confidence 77777542 2 3445555533 333 333344 55556655 54 47899999999999999998887 9999999999
Q ss_pred EEEc
Q 016179 343 VAYR 346 (394)
Q Consensus 343 v~y~ 346 (394)
++..
T Consensus 277 ~~~~ 280 (357)
T PRK00726 277 LVPL 280 (357)
T ss_pred EecC
Confidence 8743
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-22 Score=195.79 Aligned_cols=269 Identities=18% Similarity=0.228 Sum_probs=176.7
Q ss_pred eEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCcc-ccccCcceecc-----HHHhhhhHHHHHHHH
Q 016179 33 RVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKS-LFPMEDIAVMG-----IWELLPHIYKFRVRL 105 (394)
Q Consensus 33 kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~-~~~~~~l~~~G-----~~~~l~~~~~~~~~~ 105 (394)
+|+|++||+|||+. +..++++|.+.+.+ +.+++.... +....++. .+++..++..+ ..+.++.+..+...+
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~e-v~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAE-VLFLGTKRG-LEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGV 78 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCE-EEEEECCCc-chhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHH
Confidence 58999999999999 77999999988775 777655432 21111111 12222333322 234444555556677
Q ss_pred HHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HHHhhhheeecCc
Q 016179 106 KETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LAAFVDHILCILP 183 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~~~~d~v~~~~p 183 (394)
.++.+++++++||+|++++ ++.+...++++. . ++|+++ +..+. | ++ ..++ +.+++|++++.++
T Consensus 79 ~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~--~------~~p~v~-~~~~~-~---~~--~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 79 LQARKILKKFKPDVVVGFGGYVSGPVGLAAKL--L------GIPLVI-HEQNA-V---PG--LANRLLARFADRVALSFP 143 (350)
T ss_pred HHHHHHHHhcCCCEEEECCCCcchHHHHHHHH--h------CCCEEE-EcCCC-C---cc--HHHHHHHHhhCEEEEcch
Confidence 7888999999999999875 233333333322 1 678644 32322 2 22 4444 4677999999999
Q ss_pred ccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHH
Q 016179 184 NEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 263 (394)
Q Consensus 184 ~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~ 263 (394)
...+.+ .+.++.++|||+...+... .. .+++++++++.++|++++|+.+.. .....+.+
T Consensus 144 ~~~~~~--~~~~~~~i~n~v~~~~~~~----------------~~-~~~~~~~~~~~~~i~~~~g~~~~~--~~~~~l~~ 202 (350)
T cd03785 144 ETAKYF--PKDKAVVTGNPVREEILAL----------------DR-ERARLGLRPGKPTLLVFGGSQGAR--AINEAVPE 202 (350)
T ss_pred hhhhcC--CCCcEEEECCCCchHHhhh----------------hh-hHHhcCCCCCCeEEEEECCcHhHH--HHHHHHHH
Confidence 877652 2346889999997664321 11 267788888889999999988752 22233456
Q ss_pred HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEE
Q 016179 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCV 342 (394)
Q Consensus 264 a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~I 342 (394)
+++.+.+ ++.++++++|+. .. +.+++...+...++++. ++ .+++.++|+.||++|+.||+.|+ |++++|+|+|
T Consensus 203 a~~~l~~--~~~~~~~i~G~g-~~-~~l~~~~~~~~~~v~~~-g~-~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv 276 (350)
T cd03785 203 ALAELLR--KRLQVIHQTGKG-DL-EEVKKAYEELGVNYEVF-PF-IDDMAAAYAAADLVISRAGASTVAELAALGLPAI 276 (350)
T ss_pred HHHHhhc--cCeEEEEEcCCc-cH-HHHHHHHhccCCCeEEe-eh-hhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEE
Confidence 7776652 467777777764 33 34555554443467666 44 47999999999999999998886 9999999998
Q ss_pred EEE
Q 016179 343 VAY 345 (394)
Q Consensus 343 v~y 345 (394)
++.
T Consensus 277 ~~~ 279 (350)
T cd03785 277 LIP 279 (350)
T ss_pred Eee
Confidence 764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=177.94 Aligned_cols=286 Identities=14% Similarity=0.042 Sum_probs=174.5
Q ss_pred eEEEEeCCchHHHHHHHHHHHHHhcCCC-CeEEEEecChhhH----hccCcc----ccccCcceeccHHHhhhhHHHHHH
Q 016179 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPL-PVSFSGVGGSMMS----EQGMKS----LFPMEDIAVMGIWELLPHIYKFRV 103 (394)
Q Consensus 33 kIlI~aG~~sGh~~a~~l~~~L~~~~~~-~~~~~g~gg~~m~----~~g~~~----~~~~~~l~~~G~~~~l~~~~~~~~ 103 (394)
||++++|..++-...+.++++|++. ++ ++.++.. |.++. ...... .++ ..+...|-. .........
T Consensus 1 ~i~~~~gtr~~~~~~~pl~~~l~~~-~~~~~~~~~t-g~h~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~ 75 (363)
T cd03786 1 KILVVTGTRPEYIKLAPLIRALKKD-PGFELVLVVT-GQHYDMEMGVTFFEILFIIKPD-YDLLLGSDS--QSLGAQTAG 75 (363)
T ss_pred CEEEEEecCHHHHHHHHHHHHHhcC-CCCCEEEEEe-CCCCChhhhHHHHHhhCCCCCC-EEEecCCCC--CCHHHHHHH
Confidence 6899999999999999999999975 33 2334444 44321 111111 111 123333221 112223445
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc-ccc-ccCcchHHHHHHHhhhheeec
Q 016179 104 RLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS-FWA-WKGGEARLKNLAAFVDHILCI 181 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~-~wa-~~~g~~r~~~l~~~~d~v~~~ 181 (394)
...++.+.+++++||+|++.|+. +..++..+.++. .++|+ +|..... -|. ..++...-..+.+.+|.+++.
T Consensus 76 ~~~~l~~~l~~~~pDvV~~~g~~--~~~~~~~~aa~~----~~iPv-v~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 76 LLIGLEAVLLEEKPDLVLVLGDT--NETLAAALAAFK----LGIPV-AHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCc--hHHHHHHHHHHH----cCCCE-EEEecccccCCCCCCchHHHHHHHHHhhhccCC
Confidence 56677888999999999998642 222222222121 17895 5643211 110 011111112357889999999
Q ss_pred CcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhh
Q 016179 182 LPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARM 257 (394)
Q Consensus 182 ~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~ 257 (394)
++..++.+.+.|++ +.++|||+.|.+..... .......++++++++ .+.+++++|++..+ .++.
T Consensus 149 s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~-----------~~~~~~~~~~~~~~~-~~~vlv~~~r~~~~~~~k~ 216 (363)
T cd03786 149 TEEARRNLLQEGEPPERIFVVGNTMIDALLRLLE-----------LAKKELILELLGLLP-KKYILVTLHRVENVDDGEQ 216 (363)
T ss_pred CHHHHHHHHHcCCCcccEEEECchHHHHHHHHHH-----------hhccchhhhhcccCC-CCEEEEEeCCccccCChHH
Confidence 99999999888886 77899999887542110 011122345677754 56677777776643 2445
Q ss_pred HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC---CCEEEecCCCcchHHHHHHHcccceehhhHHHHHH
Q 016179 258 LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP---VPSILVPGGSSNLKYDAFSASRVALCTSGTVAVEL 334 (394)
Q Consensus 258 l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~---~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa 334 (394)
++.++++++.+.+. ++++++++++. .++.+++...+++ .+++++.....+++..+|++||++|+.||+++.|+
T Consensus 217 ~~~l~~al~~l~~~--~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sggi~~Ea 292 (363)
T cd03786 217 LEEILEALAELAEE--DVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSGGIQEEA 292 (363)
T ss_pred HHHHHHHHHHHHhc--CCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCccHHhhh
Confidence 77888998888542 57777776543 2334444444332 35666532114689999999999999999887799
Q ss_pred HHcCCCEEEEEc
Q 016179 335 QLARLPCVVAYR 346 (394)
Q Consensus 335 ~a~G~P~Iv~y~ 346 (394)
+++|+|+|++..
T Consensus 293 ~~~g~PvI~~~~ 304 (363)
T cd03786 293 SFLGVPVLNLRD 304 (363)
T ss_pred hhcCCCEEeeCC
Confidence 999999998743
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-18 Score=168.77 Aligned_cols=291 Identities=18% Similarity=0.079 Sum_probs=177.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhh--HhccCcccccc---CcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMM--SEQGMKSLFPM---EDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m--~~~g~~~~~~~---~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
|||++.+|....=..-+.++++|++...-+..++..| ++. -+...+. |.+ ..+.+.+ . .-.....+...+.
T Consensus 1 ~~i~~~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg-~h~~~~~~~~~~-~~i~~~~~~~~~~-~-~~~~~~~~~~~~~ 76 (365)
T TIGR00236 1 LKVSIVLGTRPEAIKMAPLIRALKKYPEIDSYVIVTA-QHREMLDQVLDL-FHLPPDYDLNIMS-P-GQTLGEITSNMLE 76 (365)
T ss_pred CeEEEEEecCHHHHHHHHHHHHHhhCCCCCEEEEEeC-CCHHHHHHHHHh-cCCCCCeeeecCC-C-CCCHHHHHHHHHH
Confidence 6899999998777778889999986421025555554 332 1111111 111 1122221 1 0111223445567
Q ss_pred HHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC--ccccccCcchHHHH--HHHhhhheeecC
Q 016179 107 ETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP--SFWAWKGGEARLKN--LAAFVDHILCIL 182 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~--~~wa~~~g~~r~~~--l~~~~d~v~~~~ 182 (394)
++.+++++++||+|++.|. .+..+++.+.++. .++|+ +|.... +.+.+.+.....++ +.+.+|.+|+.+
T Consensus 77 ~l~~~l~~~~pDiv~~~gd--~~~~la~a~aa~~----~~ipv-~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 77 GLEELLLEEKPDIVLVQGD--TTTTLAGALAAFY----LQIPV-GHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHHHcCCCEEEEeCC--chHHHHHHHHHHH----hCCCE-EEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCC
Confidence 7889999999999998863 2323322222221 17895 564211 11111100012222 367899999999
Q ss_pred cccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHH
Q 016179 183 PNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLP 259 (394)
Q Consensus 183 p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~ 259 (394)
+..++.+.+.|++ +.++|||+.|.+..... ...+.+.+++++. +.+++++ .|+|..+..+.++
T Consensus 150 ~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~-----------~~~~~~~~~~~~~--~~~~vl~-~~hr~~~~~k~~~ 215 (365)
T TIGR00236 150 EQAKDNLLRENVKADSIFVTGNTVIDALLTNVE-----------IAYSSPVLSEFGE--DKRYILL-TLHRRENVGEPLE 215 (365)
T ss_pred HHHHHHHHHcCCCcccEEEeCChHHHHHHHHHh-----------hccchhHHHhcCC--CCCEEEE-ecCchhhhhhHHH
Confidence 9999999888875 67899998776532110 0113455666663 3344544 5667644445578
Q ss_pred HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCC
Q 016179 260 IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARL 339 (394)
Q Consensus 260 ~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~ 339 (394)
.+++++..+.++.|+++++++++++....+.+.+.. +...+++++......++..+|+.||++|+.||++++||+++|+
T Consensus 216 ~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~~~~EA~a~g~ 294 (365)
T TIGR00236 216 NIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDFLNLAANSHLILTDSGGVQEEAPSLGK 294 (365)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHHHHHHHhCCEEEECChhHHHHHHHcCC
Confidence 899999998777788998888776544333232222 2223577664221357889999999999999999899999999
Q ss_pred CEEEEEcCC
Q 016179 340 PCVVAYRAH 348 (394)
Q Consensus 340 P~Iv~y~~~ 348 (394)
|+|.+++.+
T Consensus 295 PvI~~~~~~ 303 (365)
T TIGR00236 295 PVLVLRDTT 303 (365)
T ss_pred CEEECCCCC
Confidence 999876554
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-16 Score=151.10 Aligned_cols=275 Identities=11% Similarity=0.046 Sum_probs=143.3
Q ss_pred eEEEEeCCch-HHHH-HHHHHHHHHhcCCCCeEEEEecCh--hhHhccCccccccCcceec---cHHHhhhhHH---HH-
Q 016179 33 RVFIVAGEVS-GDSI-GSRLMSAMKKLAPLPVSFSGVGGS--MMSEQGMKSLFPMEDIAVM---GIWELLPHIY---KF- 101 (394)
Q Consensus 33 kIlI~aG~~s-Gh~~-a~~l~~~L~~~~~~~~~~~g~gg~--~m~~~g~~~~~~~~~l~~~---G~~~~l~~~~---~~- 101 (394)
||+++++|+| ||+. +.+|+++|++ +++ +.+++.|.. -++..+++.......+.+. |.....+.+. .+
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~e-v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~ 78 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYE-VSYIASGRSKNYISKYGFKVFETFPGIKLKGEDGKVNIVKTLRNKEYSP 78 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCe-EEEEEcCCHHHhhhhhcCcceeccCCceEeecCCcCcHHHHHHhhcccc
Confidence 6899999999 9999 9999999998 665 777765432 1233344321111111111 2111222221 22
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeE-EEeecCccccc-cCcchHHHHHHHhhhhee
Q 016179 102 RVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH-FHYVAPSFWAW-KGGEARLKNLAAFVDHIL 179 (394)
Q Consensus 102 ~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~-~~yv~~~~wa~-~~g~~r~~~l~~~~d~v~ 179 (394)
.+.+.+..+++++++||+||+. + ++...++++. . ++|++ ++ +| |.. .++ ........++.++
T Consensus 79 ~~~~~~~~~~l~~~~pDlVi~d-~-~~~~~~aA~~--~------~iP~i~i~---~q-~~~~~~~--~~~~~~~~~~~~~ 142 (321)
T TIGR00661 79 KKAIRREINIIREYNPDLIISD-F-EYSTVVAAKL--L------KIPVICIS---NQ-NYTRYPL--KTDLIVYPTMAAL 142 (321)
T ss_pred HHHHHHHHHHHHhcCCCEEEEC-C-chHHHHHHHh--c------CCCEEEEe---cc-hhhcCCc--ccchhHHHHHHHH
Confidence 2456778899999999999975 4 2444444443 2 79965 33 33 211 122 1222232333333
Q ss_pred ecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHH
Q 016179 180 CILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLP 259 (394)
Q Consensus 180 ~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~ 259 (394)
..++...+.+-....+...+|+| +...... .+..+.+..+ + .+.+.+.|++.+||++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~-----------~~~~~~~~~~-~-~~~~~~~iLv~~g~~~~~------ 201 (321)
T TIGR00661 143 RIFNERCERFIVPDYPFPYTICP--KIIKNME-----------GPLIRYDVDD-V-DNYGEDYILVYIGFEYRY------ 201 (321)
T ss_pred HHhccccceEeeecCCCCCCCCc--cccccCC-----------Ccccchhhhc-c-ccCCCCcEEEECCcCCHH------
Confidence 33333332221001122335555 1110000 0111111111 1 133557788988998743
Q ss_pred HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcC
Q 016179 260 IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLAR 338 (394)
Q Consensus 260 ~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G 338 (394)
.++++++.+ +++++++ +...... . .+..++.+.. +..+++.++|.+||++|+++|..|+ |++++|
T Consensus 202 ~l~~~l~~~----~~~~~i~--~~~~~~~---~----~~~~~v~~~~-~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g 267 (321)
T TIGR00661 202 KILELLGKI----ANVKFVC--YSYEVAK---N----SYNENVEIRR-ITTDNFKELIKNAELVITHGGFSLISEALSLG 267 (321)
T ss_pred HHHHHHHhC----CCeEEEE--eCCCCCc---c----ccCCCEEEEE-CChHHHHHHHHhCCEEEECCChHHHHHHHHcC
Confidence 233444332 4444433 3221111 1 1123566553 3124899999999999999999888 999999
Q ss_pred CCEEEEEcCChHHH-HHHHhhcc
Q 016179 339 LPCVVAYRAHFLTE-WFIRYKAK 360 (394)
Q Consensus 339 ~P~Iv~y~~~~~~~-~~a~~~vk 360 (394)
+|+|++...+...+ ..|+.+.+
T Consensus 268 ~P~l~ip~~~~~eQ~~na~~l~~ 290 (321)
T TIGR00661 268 KPLIVIPDLGQFEQGNNAVKLED 290 (321)
T ss_pred CCEEEEcCCCcccHHHHHHHHHH
Confidence 99998743333233 33665554
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-15 Score=141.93 Aligned_cols=244 Identities=11% Similarity=0.045 Sum_probs=144.7
Q ss_pred chHHHH-HHHHHHHHHhcCCCCeEEEEecCh-----hhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHh
Q 016179 41 VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS-----MMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALL 114 (394)
Q Consensus 41 ~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~-----~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~ 114 (394)
+.||++ ..+||++|++++.+ +.|+.-..+ .+++.|++.. .++-. .+ ...-..++.+++++
T Consensus 13 G~GHv~Rcl~LA~~l~~~g~~-v~f~~~~~~~~~~~~i~~~g~~v~----~~~~~--~~-------~~~d~~~~~~~l~~ 78 (279)
T TIGR03590 13 GLGHVMRCLTLARALHAQGAE-VAFACKPLPGDLIDLLLSAGFPVY----ELPDE--SS-------RYDDALELINLLEE 78 (279)
T ss_pred cccHHHHHHHHHHHHHHCCCE-EEEEeCCCCHHHHHHHHHcCCeEE----EecCC--Cc-------hhhhHHHHHHHHHh
Confidence 679999 99999999877654 666654321 2344454421 11100 00 01223456788888
Q ss_pred cCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHH-HHHhc-
Q 016179 115 FRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEA-ICRLN- 192 (394)
Q Consensus 115 ~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~-~~~~~- 192 (394)
.+||++|+.+| .+....-..++.. +.++ +.......+.+ .||.++...+.... .|...
T Consensus 79 ~~~d~vV~D~y-~~~~~~~~~~k~~------~~~l-~~iDD~~~~~~------------~~D~vin~~~~~~~~~y~~~~ 138 (279)
T TIGR03590 79 EKFDILIVDHY-GLDADWEKLIKEF------GRKI-LVIDDLADRPH------------DCDLLLDQNLGADASDYQGLV 138 (279)
T ss_pred cCCCEEEEcCC-CCCHHHHHHHHHh------CCeE-EEEecCCCCCc------------CCCEEEeCCCCcCHhHhcccC
Confidence 89999997555 5666666666643 3342 32222221111 58988877665322 23321
Q ss_pred -CCCeEEEcC---CCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHh
Q 016179 193 -GLAATFVGH---PVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELL 268 (394)
Q Consensus 193 -g~~~~~vG~---Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l 268 (394)
.-...+.|. |+|++|.... +....++ +.+.+++.+|||.++.+ ...+++++..+
T Consensus 139 ~~~~~~l~G~~Y~~lr~eF~~~~---------------~~~~~~~----~~~~iLi~~GG~d~~~~---~~~~l~~l~~~ 196 (279)
T TIGR03590 139 PANCRLLLGPSYALLREEFYQLA---------------TANKRRK----PLRRVLVSFGGADPDNL---TLKLLSALAES 196 (279)
T ss_pred cCCCeEEecchHHhhhHHHHHhh---------------Hhhhccc----ccCeEEEEeCCcCCcCH---HHHHHHHHhcc
Confidence 113568999 9999986311 0111111 22346666777776542 22344555443
Q ss_pred hhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEc
Q 016179 269 KDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYR 346 (394)
Q Consensus 269 ~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~ 346 (394)
.+++++.+++|++....+.+++.....+ ++++..+ .++|.++|+.||++|+++|+++.|++++|+|+|++..
T Consensus 197 ---~~~~~i~vv~G~~~~~~~~l~~~~~~~~-~i~~~~~--~~~m~~lm~~aDl~Is~~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 197 ---QINISITLVTGSSNPNLDELKKFAKEYP-NIILFID--VENMAELMNEADLAIGAAGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ---ccCceEEEEECCCCcCHHHHHHHHHhCC-CEEEEeC--HHHHHHHHHHCCEEEECCchHHHHHHHcCCCEEEEEe
Confidence 2467888888875333344555544433 6776643 5899999999999999989544599999999998743
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-14 Score=137.97 Aligned_cols=284 Identities=15% Similarity=0.135 Sum_probs=184.9
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCCCCeE-EEEecChhh---------HhccCccccccCcceec--c--HHHhh
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS-FSGVGGSMM---------SEQGMKSLFPMEDIAVM--G--IWELL 95 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~-~~g~gg~~m---------~~~g~~~~~~~~~l~~~--G--~~~~l 95 (394)
+++||+++.|...-=+.-+.+++++.+.. + ++ ++.+.|+++ +.-++.. |-..+.++ | +.+.
T Consensus 2 ~~~Kv~~I~GTRPE~iKmapli~~~~~~~-~-~~~~vi~TGQH~d~em~~~~le~~~i~~--pdy~L~i~~~~~tl~~~- 76 (383)
T COG0381 2 KMLKVLTIFGTRPEAIKMAPLVKALEKDP-D-FELIVIHTGQHRDYEMLDQVLELFGIRK--PDYDLNIMKPGQTLGEI- 76 (383)
T ss_pred CceEEEEEEecCHHHHHHhHHHHHHHhCC-C-CceEEEEecccccHHHHHHHHHHhCCCC--CCcchhccccCCCHHHH-
Confidence 57899999998877777889999998753 2 33 445555654 2222321 22334444 2 2232
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC----ccccccCcchHHHH-
Q 016179 96 PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP----SFWAWKGGEARLKN- 170 (394)
Q Consensus 96 ~~~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~----~~wa~~~g~~r~~~- 170 (394)
.-+.+..+.+++.+++||+|+..| +.+..+|..|.+.+. +||+ .|-... ..+ |+. =+||
T Consensus 77 -----t~~~i~~~~~vl~~~kPD~VlVhG--DT~t~lA~alaa~~~----~IpV-~HvEAGlRt~~~~-~PE---E~NR~ 140 (383)
T COG0381 77 -----TGNIIEGLSKVLEEEKPDLVLVHG--DTNTTLAGALAAFYL----KIPV-GHVEAGLRTGDLY-FPE---EINRR 140 (383)
T ss_pred -----HHHHHHHHHHHHHhhCCCEEEEeC--CcchHHHHHHHHHHh----CCce-EEEecccccCCCC-CcH---HHHHH
Confidence 334556677888899999988765 344444444433322 7895 674221 112 332 2333
Q ss_pred -HHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 171 -LAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 171 -l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
....+|..|+..+..++.|.+.|++ +.+||||+.|.+..... ...+.......+-.+.++..|+++
T Consensus 141 l~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~----------~~~~~~~~~~~~~~~~~~~~iLvT 210 (383)
T COG0381 141 LTSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRD----------RVLEDSKILAKGLDDKDKKYILVT 210 (383)
T ss_pred HHHHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHh----------hhccchhhHHhhhccccCcEEEEE
Confidence 3778999999999999999888986 67899999998754210 001112222221122344566665
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceeh
Q 016179 247 PGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCT 326 (394)
Q Consensus 247 gGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~ 326 (394)
+.|...+...+..+.+++.++.+++++++++.++.+++.+++.....+.. ..+++++++....++..+|..|-+++|-
T Consensus 211 -~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~-~~~v~li~pl~~~~f~~L~~~a~~iltD 288 (383)
T COG0381 211 -AHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKN-VERVKLIDPLGYLDFHNLMKNAFLILTD 288 (383)
T ss_pred -cchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCC-CCcEEEeCCcchHHHHHHHHhceEEEec
Confidence 57775443457788889999988888999999999875554433222222 2257777654356889999999999999
Q ss_pred hhHHHHHHHHcCCCEEEEEc
Q 016179 327 SGTVAVELQLARLPCVVAYR 346 (394)
Q Consensus 327 SGt~tlEa~a~G~P~Iv~y~ 346 (394)
||+..-||..+|+|++++..
T Consensus 289 SGgiqEEAp~lg~Pvl~lR~ 308 (383)
T COG0381 289 SGGIQEEAPSLGKPVLVLRD 308 (383)
T ss_pred CCchhhhHHhcCCcEEeecc
Confidence 99999999999999998743
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-13 Score=134.34 Aligned_cols=283 Identities=13% Similarity=0.088 Sum_probs=166.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCC-CeEEEEecChhhH-----------hccCccccccCcceeccHHHhhhhHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPL-PVSFSGVGGSMMS-----------EQGMKSLFPMEDIAVMGIWELLPHIY 99 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~-~~~~~g~gg~~m~-----------~~g~~~~~~~~~l~~~G~~~~l~~~~ 99 (394)
|||++++|....=+.-+.++++|++. ++ ++.++..| +++. +.|+... +-..+.+++-. .-....
T Consensus 1 ~ki~~v~GtRpe~iklapv~~~l~~~-~~~~~~lv~tG-qH~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 76 (365)
T TIGR03568 1 KKICVVTGTRADYGLLRPLLKALQDD-PDLELQLIVTG-MHLSPEYGNTVNEIEKDGFDID-EKIEILLDSDS-NAGMAK 76 (365)
T ss_pred CeEEEEEecChhHHHHHHHHHHHhcC-CCCcEEEEEeC-CCCChhhccHHHHHHHcCCCCC-CccccccCCCC-CCCHHH
Confidence 68999999998888888999999863 22 24455544 4432 2223211 11112222100 001112
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccc-cCcchHHHH-HHHhhhh
Q 016179 100 KFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAW-KGGEARLKN-LAAFVDH 177 (394)
Q Consensus 100 ~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~-~~g~~r~~~-l~~~~d~ 177 (394)
.+.+.+.++.+++++++||+|++.|. .+..++..+...+ .+||+ .|... ..+.+ .+. ...++ +.+.+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~Pd~vlv~GD--~~~~la~alaA~~----~~IPv-~Hvea-G~rs~~~~e-E~~r~~i~~la~l 147 (365)
T TIGR03568 77 SMGLTIIGFSDAFERLKPDLVVVLGD--RFEMLAAAIAAAL----LNIPI-AHIHG-GEVTEGAID-ESIRHAITKLSHL 147 (365)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCC--chHHHHHHHHHHH----hCCcE-EEEEC-CccCCCCch-HHHHHHHHHHHhh
Confidence 24455677888999999999998873 2222222222221 17995 67532 22211 111 12333 4888999
Q ss_pred eeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH-H
Q 016179 178 ILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ-E 253 (394)
Q Consensus 178 v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~-e 253 (394)
.|+..+..++.+.+.|++ +.+||+|+.|.+.... ..+++++.+++|++++++.++++. .++. +
T Consensus 148 ~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~------------~~~~~~~~~~lgl~~~~~~vlvt~-Hp~~~~ 214 (365)
T TIGR03568 148 HFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLD------------LLSKEELEEKLGIDLDKPYALVTF-HPVTLE 214 (365)
T ss_pred ccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhh------------ccCHHHHHHHhCCCCCCCEEEEEe-CCCccc
Confidence 999999989988888873 7789999999875421 124567788899976556644432 2221 1
Q ss_pred -H--HhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc--ChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhh
Q 016179 254 -V--ARMLPIFAKTVELLKDSFPELITVIHVAPNR--HVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSG 328 (394)
Q Consensus 254 -i--~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~--~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SG 328 (394)
. ...+..+++++..+. .++.++++.+... ...+.+++...+ ..++.++......++..+|+.||++|+-|+
T Consensus 215 ~~~~~~~l~~li~~L~~~~---~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS 290 (365)
T TIGR03568 215 KESAEEQIKELLKALDELN---KNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLGQERYLSLLKNADAVIGNSS 290 (365)
T ss_pred ccCchHHHHHHHHHHHHhc---cCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCChHHHHHHHHhCCEEEEcCh
Confidence 1 122444555554432 2455565544211 122334433221 235777753225789999999999999995
Q ss_pred HHHHHHHHcCCCEEEE
Q 016179 329 TVAVELQLARLPCVVA 344 (394)
Q Consensus 329 t~tlEa~a~G~P~Iv~ 344 (394)
+...||+++|+|+|.+
T Consensus 291 ggi~EA~~lg~Pvv~l 306 (365)
T TIGR03568 291 SGIIEAPSFGVPTINI 306 (365)
T ss_pred hHHHhhhhcCCCEEee
Confidence 5559999999999975
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-13 Score=133.91 Aligned_cols=284 Identities=14% Similarity=0.113 Sum_probs=163.9
Q ss_pred EEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChh---hHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSM---MSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 34 IlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~---m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
|+-+.+.+|...+...++++|.+.+.+ +.++..+++. .+..|++.. .+...+. ........+..+.+
T Consensus 3 ~~~~~~~gG~e~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~l~~ 72 (355)
T cd03819 3 VLPALESGGVERGTLELARALVERGHR-SLVASAGGRLVAELEAEGSRHI----KLPFISK-----NPLRILLNVARLRR 72 (355)
T ss_pred cchhhccCcHHHHHHHHHHHHHHcCCE-EEEEcCCCchHHHHHhcCCeEE----Ecccccc-----chhhhHHHHHHHHH
Confidence 333333344567788999999987664 6666544432 233344321 1111110 11112233455677
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+++.+||+|++.+. ++...+..+.+.. ++|++.+ .+..|.... ..+.+.+.+|.+++.++...+.+.
T Consensus 73 ~~~~~~~dii~~~~~--~~~~~~~~~~~~~-----~~~~i~~--~h~~~~~~~---~~~~~~~~~~~vi~~s~~~~~~~~ 140 (355)
T cd03819 73 LIREEKVDIVHARSR--APAWSAYLAARRT-----RPPFVTT--VHGFYSVNF---RYNAIMARGDRVIAVSNFIADHIR 140 (355)
T ss_pred HHHHcCCCEEEECCC--chhHHHHHHHHhc-----CCCEEEE--eCCchhhHH---HHHHHHHhcCEEEEeCHHHHHHHH
Confidence 888999999997642 2222222222121 6786433 233332210 234456679999999998888876
Q ss_pred -hcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHH
Q 016179 191 -LNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 266 (394)
Q Consensus 191 -~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~ 266 (394)
.++++ +.+++|++.......... ........+++++.+++.++++.. |.-. .. +....+++++.
T Consensus 141 ~~~~~~~~k~~~i~ngi~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~-Gr~~-~~-Kg~~~li~~~~ 208 (355)
T cd03819 141 ENYGVDPDRIRVIPRGVDLDRFDPGAV---------PPERILALAREWPLPKGKPVILLP-GRLT-RW-KGQEVFIEALA 208 (355)
T ss_pred HhcCCChhhEEEecCCccccccCcccc---------chHHHHHHHHHcCCCCCceEEEEe-eccc-cc-cCHHHHHHHHH
Confidence 45553 677888764432210000 000112256777877776655554 4332 12 23567888999
Q ss_pred HhhhhCCCeEEEEEeCCCcC--hHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh------hHHHHHHHH
Q 016179 267 LLKDSFPELITVIHVAPNRH--VENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS------GTVAVELQL 336 (394)
Q Consensus 267 ~l~~~~~~~~~vi~~g~~~~--~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S------Gt~tlEa~a 336 (394)
.+.++.+++++++++.+... +.+.+.+.+.+.+ .++.++ |+ .+++.++|+.||++|..| |.+.+||++
T Consensus 209 ~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a 286 (355)
T cd03819 209 RLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFV-GH-CSDMPAAYALADIVVSASTEPEAFGRTAVEAQA 286 (355)
T ss_pred HHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEc-CC-cccHHHHHHhCCEEEecCCCCCCCchHHHHHHh
Confidence 88776678998888875432 2222233333333 246666 44 579999999999999988 555569999
Q ss_pred cCCCEEEEEcCChHHHHH
Q 016179 337 ARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 337 ~G~P~Iv~y~~~~~~~~~ 354 (394)
+|+|+|+ +..++....+
T Consensus 287 ~G~PvI~-~~~~~~~e~i 303 (355)
T cd03819 287 MGRPVIA-SDHGGARETV 303 (355)
T ss_pred cCCCEEE-cCCCCcHHHH
Confidence 9999886 5556655555
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=133.65 Aligned_cols=299 Identities=18% Similarity=0.171 Sum_probs=173.8
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcC-CCCeE----EEEecChhhHhccCccccccCcceeccHHH-hhhhHHHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLA-PLPVS----FSGVGGSMMSEQGMKSLFPMEDIAVMGIWE-LLPHIYKFRV 103 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~-~~~~~----~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~-~l~~~~~~~~ 103 (394)
..+||++++.|+|.|+.|.+|+++|+++. |+++- ++|.|+ .++..+++...+...++..||.. -++.+.+-.+
T Consensus 5 ~~~kiLllSNGHgEDlia~~i~qal~rra~p~eila~LPLVGeG~-aYq~l~i~ligpv~~mPSGGf~y~~~~~l~rDvr 83 (412)
T COG4370 5 VAPKILLLSNGHGEDLIAVAIAQALRRRAPPDEILAALPLVGEGG-AYQNLNIELIGPVLTMPSGGFIYMDLRNLWRDVR 83 (412)
T ss_pred cccceEEeecCchHHHHHHHHHHHHHhhCCCcceeeccccccCch-hhcccCcceecccccCCCCCcccccHHHHHHHHh
Confidence 57899999999999999999999999876 33222 356664 56666777666777777777641 1122221111
Q ss_pred -H-----HHHHHHHHHhcCCC--------EEEEeCCCCchHHHHHHHHHhccccCCCCCe--EEEeecCccccccC--cc
Q 016179 104 -R-----LKETIEAALLFRPH--------AVVTVDSKGFSFRLLKQLRARYSHERLNGPA--HFHYVAPSFWAWKG--GE 165 (394)
Q Consensus 104 -~-----~~~~~~~i~~~~PD--------~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~--~~~yv~~~~wa~~~--g~ 165 (394)
. +.|+ ..++++.|. .++.+|- ..++.++ .+..... +.+++ .-||+....-.|.+ +-
T Consensus 84 gGLvqlT~~Qi-~alrkq~~q~~~~g~~~~ilAvGd-ivpla~a-~lg~~~y---~~v~~a~seyyvr~~~g~~l~~t~a 157 (412)
T COG4370 84 GGLVQLTLGQI-LALRKQGPQLERVGVVGDILAVGD-IVPLAFA-ILGGLAY---AFVGTAKSEYYVRVEYGLGLPLTGA 157 (412)
T ss_pred ccHHHhhHHHH-HHHHHhhhhhhhcccccceEEecc-hhHHHHH-hhcCCcc---cceeecccceeeeeccccCCccchh
Confidence 1 1121 122333332 3455542 2344333 2221100 11121 12343211111111 00
Q ss_pred hHH-H---------H--HHHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhh
Q 016179 166 ARL-K---------N--LAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNK 233 (394)
Q Consensus 166 ~r~-~---------~--l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 233 (394)
-|- | + ..|.|-.+|.-..++.+.+.+.|+++.++|||++|.+... +.....
T Consensus 158 ~rwen~lg~~y~pwwlm~~rrc~~vf~rD~~Taq~L~~rgvna~~vGnpmmD~L~p~--------------~~~~q~--- 220 (412)
T COG4370 158 LRWENALGAVYMPWWLMLRRRCWAVFPRDALTAQHLANRGVNAAYVGNPMMDGLPPP--------------ERDPQL--- 220 (412)
T ss_pred hhhhhhcccchhhHHHHhcccceeeeccccccHHHHHhcCCchhhccChhhccCCCc--------------cCCchh---
Confidence 000 0 1 2667888888778888899999999999999999986420 111111
Q ss_pred cCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHh--hcCCC--------CEE
Q 016179 234 YSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLI--QKWPV--------PSI 303 (394)
Q Consensus 234 lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~--~~~~~--------~v~ 303 (394)
+-...++|.++||||..|...+++.++.++-.+...+..+.|+-...+...+. .+.... .+|.. +..
T Consensus 221 --l~~g~~viaLLPGsR~pea~~nl~~il~slcal~~~~a~vvfw~ai~~~lpl~-~l~~l~e~~gWq~~ad~~~kdnc~ 297 (412)
T COG4370 221 --LLTGVPVIALLPGSRVPEAQTNLAVILGSLCALPAMFALVVFWAAIAPELPLL-LLWTLEERQGWQPLADRFGKDNCS 297 (412)
T ss_pred --hccCCceEEecCCCCChHHHhhHHHHHHHHhhhHHHHHHHHHHhccCcCCCHH-HHHHHHHhcCcchhhhhhccCceE
Confidence 12456799999999988877778888876655544333322322222222211 111111 12221 233
Q ss_pred EecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEE-EcCChHHHHHHHh
Q 016179 304 LVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVA-YRAHFLTEWFIRY 357 (394)
Q Consensus 304 ~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~-y~~~~~~~~~a~~ 357 (394)
++.- .....+++.+||+++.++||+|.++..+|+|+|-+ -..+..++.||.+
T Consensus 298 l~ls--qqsfadiLH~adaalgmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~r 350 (412)
T COG4370 298 LWLS--QQSFADILHAADAALGMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAER 350 (412)
T ss_pred EEEe--HHHHHHHHHHHHHHHHhccchHHHhhccCCceeecCCCCCCcChHHHHH
Confidence 3322 45789999999999999999999999999999865 3677889889754
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-13 Score=131.77 Aligned_cols=283 Identities=14% Similarity=0.052 Sum_probs=159.4
Q ss_pred EEEEeC--CchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 34 VFIVAG--EVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 34 IlI~aG--~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
|+++.. +.||+.. +.+++++|++++.+ ++++...+....+. .........+. + .+....++..+.++.+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~~-~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~ 73 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQ-VAIISLTGESEVKP-PIDATIILNLN---M---SKNPLSFLLALWKLRK 73 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCce-EEEEEEeCCCCccc-hhhccceEEec---c---cccchhhHHHHHHHHH
Confidence 554433 3577666 88899999887765 87776544321111 00000000010 1 1112223344556778
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HHHhhhheeecCcccHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LAAFVDHILCILPNEEAIC 189 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~~~~d~v~~~~p~~~~~~ 189 (394)
++++++||+|++.... +..++..++... .+.|+++. .+..+.+........+ ..++++.+.+.++...+.+
T Consensus 74 ~~~~~~pdiv~~~~~~--~~~~~~l~~~~~----~~~~~v~~--~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 145 (360)
T cd04951 74 ILRQFKPDVVHAHMFH--ANIFARLLRLFL----PSPPLICT--AHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDYF 145 (360)
T ss_pred HHHhcCCCEEEEcccc--hHHHHHHHHhhC----CCCcEEEE--eeccCchhHHHHHHHHHHhhccCceEEEcHHHHHHH
Confidence 8899999999875421 222222222221 14564332 2222111000001111 2445677777778777777
Q ss_pred HhcC-C---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHH
Q 016179 190 RLNG-L---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 265 (394)
Q Consensus 190 ~~~g-~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~ 265 (394)
.+.+ + ++.++.|++..... .+ ....+...+++++++++.++++.+|+... . +....+++++
T Consensus 146 ~~~~~~~~~~~~~i~ng~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~-kg~~~li~a~ 210 (360)
T cd04951 146 IASKAFNANKSFVVYNGIDTDRF--RK----------DPARRLKIRNALGVKNDTFVILAVGRLVE--A-KDYPNLLKAF 210 (360)
T ss_pred HhccCCCcccEEEEccccchhhc--Cc----------chHHHHHHHHHcCcCCCCEEEEEEeeCch--h-cCcHHHHHHH
Confidence 6554 3 35566665532211 10 01223456778888888777777654332 2 3356788899
Q ss_pred HHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcC
Q 016179 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLAR 338 (394)
Q Consensus 266 ~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G 338 (394)
..+.++.|++++++++.+. . .+.+++...+.+ .++.++ |+ .+++.++|+.||++|..| |.+.+||+++|
T Consensus 211 ~~l~~~~~~~~l~i~G~g~-~-~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G 286 (360)
T cd04951 211 AKLLSDYLDIKLLIAGDGP-L-RATLERLIKALGLSNRVKLL-GL-RDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACE 286 (360)
T ss_pred HHHHhhCCCeEEEEEcCCC-c-HHHHHHHHHhcCCCCcEEEe-cc-cccHHHHHHhhceEEecccccCCChHHHHHHHcC
Confidence 8888777889999887653 2 234455444433 246666 44 578999999999999998 45556999999
Q ss_pred CCEEEEEcCChHHH
Q 016179 339 LPCVVAYRAHFLTE 352 (394)
Q Consensus 339 ~P~Iv~y~~~~~~~ 352 (394)
+|+|+ .+.+....
T Consensus 287 ~PvI~-~~~~~~~e 299 (360)
T cd04951 287 LPVVA-TDAGGVRE 299 (360)
T ss_pred CCEEE-ecCCChhh
Confidence 99886 55554443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.2e-13 Score=130.26 Aligned_cols=289 Identities=12% Similarity=0.057 Sum_probs=164.7
Q ss_pred ceEEEEeC-CchH-HHHHHHHHHHHHhcCCCCeEEEEecChh-h--HhccCccccccCcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVAG-EVSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSM-M--SEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~aG-~~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~-m--~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
|||++++- ..|| ..++..+++.|.+.+.+ +.++...++. . ...++.. . .+.+..+ ..............
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~-v~v~~~~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~~~~~~~~~~~ 74 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHE-VHFITSSRPFRLDEYSPNIFF--H--EVEVPQY-PLFQYPPYDLALAS 74 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCc-eEEEecCCCcchhhhccCeEE--E--Eeccccc-chhhcchhHHHHHH
Confidence 57766554 3455 34478999999998775 8777654331 1 1111111 0 0111111 01111111223345
Q ss_pred HHHHHHHhcCCCEEEEeCC-CC-chHHHHHHHHHhccccCCCCCeEEEeecCcccc--ccCcchH-HHHHHHhhhheeec
Q 016179 107 ETIEAALLFRPHAVVTVDS-KG-FSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA--WKGGEAR-LKNLAAFVDHILCI 181 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~-~~-f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa--~~~g~~r-~~~l~~~~d~v~~~ 181 (394)
.+.+.+++.+||+|++.+. +. +...++.++.++ .++|+++++.....+. +...... .+...+.+|.+++.
T Consensus 75 ~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 75 KIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGK-----KDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHHhcCCccEEeecccCCccHHHHHHHHhcCc-----CCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEc
Confidence 6778888999999987542 11 122222222211 1578654432211110 1111011 23346789999999
Q ss_pred CcccHHHHHhcC---CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhH
Q 016179 182 LPNEEAICRLNG---LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARML 258 (394)
Q Consensus 182 ~p~~~~~~~~~g---~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l 258 (394)
++..++.+.+.. -++.++.|++..... . +..+...+++++++++.++++.+|+-. +.+ .+
T Consensus 150 s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~il~~g~l~--~~K-~~ 212 (371)
T cd04962 150 SESLRQETYELFDITKEIEVIPNFVDEDRF--R------------PKPDEALKRRLGAPEGEKVLIHISNFR--PVK-RI 212 (371)
T ss_pred CHHHHHHHHHhcCCcCCEEEecCCcCHhhc--C------------CCchHHHHHhcCCCCCCeEEEEecccc--ccc-CH
Confidence 999888776542 246788887644321 1 122344567788888887777664322 223 35
Q ss_pred HHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHH
Q 016179 259 PIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVA 331 (394)
Q Consensus 259 ~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~t 331 (394)
..+++++..+.++ ++.++++++.+. +. +.+++...+.+. ++.+.. + .+++.++|+.||++|..| |.+.
T Consensus 213 ~~li~a~~~l~~~-~~~~l~i~G~g~-~~-~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~~~d~~v~ps~~E~~~~~~ 287 (371)
T cd04962 213 DDVIRIFAKVRKE-VPARLLLVGDGP-ER-SPAERLARELGLQDDVLFLG-K-QDHVEELLSIADLFLLPSEKESFGLAA 287 (371)
T ss_pred HHHHHHHHHHHhc-CCceEEEEcCCc-CH-HHHHHHHHHcCCCceEEEec-C-cccHHHHHHhcCEEEeCCCcCCCccHH
Confidence 6788888888654 468888777653 32 345555544433 466664 4 578999999999999998 6666
Q ss_pred HHHHHcCCCEEEEEcCChHHHHH
Q 016179 332 VELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 332 lEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+||+++|+|+|. .+.+.....+
T Consensus 288 ~EAma~g~PvI~-s~~~~~~e~i 309 (371)
T cd04962 288 LEAMACGVPVVA-SNAGGIPEVV 309 (371)
T ss_pred HHHHHcCCCEEE-eCCCCchhhh
Confidence 799999999886 4555444444
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.4e-13 Score=129.30 Aligned_cols=263 Identities=16% Similarity=0.234 Sum_probs=134.5
Q ss_pred ceEEE-EeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecCh-h-hHhccCccccccCcceec---cHH---Hhhh----h
Q 016179 32 LRVFI-VAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS-M-MSEQGMKSLFPMEDIAVM---GIW---ELLP----H 97 (394)
Q Consensus 32 ~kIlI-~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~-~-m~~~g~~~~~~~~~l~~~---G~~---~~l~----~ 97 (394)
|||++ +.|.+.||+. +.+|+++|+ +++ +.++..|.. . ++.. +.. .....+... +-. ..+. .
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~Lr--g~~-v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARALR--GHE-VTFITSGPAPEFLKPR-FPV-REIPGLGPIQENGRLDRWKTVRNNIRW 75 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHHc--cCc-eEEEEcCCcHHHhccc-cCE-EEccCceEeccCCccchHHHHHHHHHh
Confidence 78876 4555889999 999999993 464 877766532 2 2222 221 111122111 111 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccC-----cchHH-HHH
Q 016179 98 IYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG-----GEARL-KNL 171 (394)
Q Consensus 98 ~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~-----g~~r~-~~l 171 (394)
...+.+.+.+..+.+++++||+||+ |+..+.. .++ +.. ++|++ . +.++.|...+ ..... ..+
T Consensus 76 ~~~~~~~~~~~~~~l~~~~pDlVIs-D~~~~~~-~aa--~~~------giP~i-~-i~~~~~~~~~~~~~~~~~~~~~~~ 143 (318)
T PF13528_consen 76 LARLARRIRREIRWLREFRPDLVIS-DFYPLAA-LAA--RRA------GIPVI-V-ISNQYWFLHPNFWLPWDQDFGRLI 143 (318)
T ss_pred hHHHHHHHHHHHHHHHhcCCCEEEE-cChHHHH-HHH--Hhc------CCCEE-E-EEehHHcccccCCcchhhhHHHHH
Confidence 2234556677888999999999985 7432322 222 222 78963 2 3444444211 00011 112
Q ss_pred HHhhhheeecCcccHHHHH-------hcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEE
Q 016179 172 AAFVDHILCILPNEEAICR-------LNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVIS 244 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~-------~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Il 244 (394)
.++.+.+. ++.....+. ....+..++|-.+++... +.. +.+.+.|+
T Consensus 144 ~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~-----------------------~~~--~~~~~~iL 196 (318)
T PF13528_consen 144 ERYIDRYH--FPPADRRLALSFYPPLPPFFRVPFVGPIIRPEIR-----------------------ELP--PEDEPKIL 196 (318)
T ss_pred HHhhhhcc--CCcccceecCCccccccccccccccCchhccccc-----------------------ccC--CCCCCEEE
Confidence 33333320 111111110 000112233322222111 110 12344555
Q ss_pred EECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccce
Q 016179 245 LLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVAL 324 (394)
Q Consensus 245 llgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I 324 (394)
+.-|+-+.. .++++++. .++.++++. |.+. .+. . ..++++... ..+++.++|++||++|
T Consensus 197 v~~gg~~~~------~~~~~l~~----~~~~~~~v~-g~~~-~~~------~--~~ni~~~~~-~~~~~~~~m~~ad~vI 255 (318)
T PF13528_consen 197 VYFGGGGPG------DLIEALKA----LPDYQFIVF-GPNA-ADP------R--PGNIHVRPF-STPDFAELMAAADLVI 255 (318)
T ss_pred EEeCCCcHH------HHHHHHHh----CCCCeEEEE-cCCc-ccc------c--CCCEEEeec-ChHHHHHHHHhCCEEE
Confidence 544444422 23444444 356777777 5432 111 0 225766642 1268999999999999
Q ss_pred ehhhHHHH-HHHHcCCCEEEEEcCChHHHHH-HHhhc
Q 016179 325 CTSGTVAV-ELQLARLPCVVAYRAHFLTEWF-IRYKA 359 (394)
Q Consensus 325 ~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~-a~~~v 359 (394)
+++|..|+ |++++|+|++++...+..++.. |+++-
T Consensus 256 s~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~ 292 (318)
T PF13528_consen 256 SKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLE 292 (318)
T ss_pred ECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHH
Confidence 99999987 9999999999876655455444 56554
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-12 Score=134.46 Aligned_cols=287 Identities=13% Similarity=0.111 Sum_probs=157.7
Q ss_pred CCceEEEEeCC------chHHHHHHHHHHHHHhcCCCCeEEEEecChhh-HhccCccccccCcceeccHHHhhhhHHHHH
Q 016179 30 GELRVFIVAGE------VSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMM-SEQGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 30 ~~~kIlI~aG~------~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m-~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
.+|||++.+.. +|.+.+...++++|++++.+ +.++....... +..++... ........ +...+ ...+
T Consensus 57 ~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~e-V~vlt~~~~~~~~~~g~~v~-~~~~~~~~-~~~~~---~~~~ 130 (465)
T PLN02871 57 RPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDE-VLVVTTDEGVPQEFHGAKVI-GSWSFPCP-FYQKV---PLSL 130 (465)
T ss_pred CCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCe-EEEEecCCCCCccccCceee-ccCCcCCc-cCCCc---eeec
Confidence 56899877542 23366677899999988764 77665432111 11122210 00000000 00000 0000
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc-c----ccccCcc---hH-HHHHHH
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS-F----WAWKGGE---AR-LKNLAA 173 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~-~----wa~~~g~---~r-~~~l~~ 173 (394)
....++.+++++.+||+|++.+ +++....+..+.++. ++|+++.+..+. . +.+.... +. .+.+.+
T Consensus 131 ~~~~~l~~~i~~~kpDiIh~~~-~~~~~~~~~~~ak~~-----~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 204 (465)
T PLN02871 131 ALSPRIISEVARFKPDLIHASS-PGIMVFGALFYAKLL-----CVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHR 204 (465)
T ss_pred cCCHHHHHHHHhCCCCEEEECC-CchhHHHHHHHHHHh-----CCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHh
Confidence 1112566788889999998764 333322222222221 689765443221 0 0010000 01 123567
Q ss_pred hhhheeecCcccHHHHHhcCC----CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcC-CCCCCcEEEEECC
Q 016179 174 FVDHILCILPNEEAICRLNGL----AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYS-VPSGATVISLLPG 248 (394)
Q Consensus 174 ~~d~v~~~~p~~~~~~~~~g~----~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg-l~~~~~~IlllgG 248 (394)
.+|.+++.++...+.+.+.+. ++.++.|.+..+. +.+ ..+..+.+.++. .+++.++|+.+ |
T Consensus 205 ~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~--f~p-----------~~~~~~~~~~~~~~~~~~~~i~~v-G 270 (465)
T PLN02871 205 AADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSES--FHP-----------RFRSEEMRARLSGGEPEKPLIVYV-G 270 (465)
T ss_pred hCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccc--cCC-----------ccccHHHHHHhcCCCCCCeEEEEe-C
Confidence 899999999999988877652 3566666654332 111 112334555553 23456666554 6
Q ss_pred CcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehh
Q 016179 249 SRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTS 327 (394)
Q Consensus 249 Srg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S 327 (394)
+.+.+ +.+..++++++.+ +++++++++++. .++.++++..+ .++.+. |+. .+++.++|+.||++|..|
T Consensus 271 rl~~~--K~~~~li~a~~~~----~~~~l~ivG~G~--~~~~l~~~~~~--~~V~f~-G~v~~~ev~~~~~~aDv~V~pS 339 (465)
T PLN02871 271 RLGAE--KNLDFLKRVMERL----PGARLAFVGDGP--YREELEKMFAG--TPTVFT-GMLQGDELSQAYASGDVFVMPS 339 (465)
T ss_pred CCchh--hhHHHHHHHHHhC----CCcEEEEEeCCh--HHHHHHHHhcc--CCeEEe-ccCCHHHHHHHHHHCCEEEECC
Confidence 66632 3456666666543 689988888653 23445555443 256665 442 368999999999999988
Q ss_pred -----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 -----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 -----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+|+|++|+|+|. .+.+.....+
T Consensus 340 ~~E~~g~~vlEAmA~G~PVI~-s~~gg~~eiv 370 (465)
T PLN02871 340 ESETLGFVVLEAMASGVPVVA-ARAGGIPDII 370 (465)
T ss_pred cccccCcHHHHHHHcCCCEEE-cCCCCcHhhh
Confidence 4455699999999886 4445554444
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-12 Score=125.10 Aligned_cols=278 Identities=15% Similarity=0.084 Sum_probs=159.3
Q ss_pred eCCchHHHH-HHHHHHHHHhcCCCCeEEEEecCh-h----hHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHH
Q 016179 38 AGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS-M----MSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEA 111 (394)
Q Consensus 38 aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~-~----m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~ 111 (394)
+.+.||.-. ...++++|.+.+.+ +.++..... . +...+++.. .+. ..... .....+.++.++
T Consensus 8 ~~~~gG~~~~~~~l~~~l~~~~~~-v~~~~~~~~~~~~~~~~~~~i~v~----~~~---~~~~~----~~~~~~~~~~~~ 75 (365)
T cd03807 8 GLDVGGAERMLVRLLKGLDRDRFE-HVVISLTDRGELGEELEEAGVPVY----CLG---KRPGR----PDPGALLRLYKL 75 (365)
T ss_pred eccCccHHHHHHHHHHHhhhccce-EEEEecCcchhhhHHHHhcCCeEE----EEe---ccccc----ccHHHHHHHHHH
Confidence 334566555 78899999776554 666655432 1 222233321 111 10111 122334456778
Q ss_pred HHhcCCCEEEEeCCC-CchHHHHHHHHHhccccCCCCCeEEEeecCcccc---ccCc-chHH-HHHHHhhhheeecCccc
Q 016179 112 ALLFRPHAVVTVDSK-GFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA---WKGG-EARL-KNLAAFVDHILCILPNE 185 (394)
Q Consensus 112 i~~~~PD~Vi~~~~~-~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa---~~~g-~~r~-~~l~~~~d~v~~~~p~~ 185 (394)
+++.+||+|++..+. .+...++.... . +.|+ ++......+. |... ..+. ..+.+.+|.+++.++..
T Consensus 76 ~~~~~~div~~~~~~~~~~~~~~~~~~-~------~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~ 147 (365)
T cd03807 76 IRRLRPDVVHTWMYHADLYGGLAARLA-G------VPPV-IWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAA 147 (365)
T ss_pred HHhhCCCEEEeccccccHHHHHHHHhc-C------CCcE-EEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHH
Confidence 889999999986532 22222222221 1 4564 3332222111 1110 0011 12466788888999988
Q ss_pred HHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHH
Q 016179 186 EAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFA 262 (394)
Q Consensus 186 ~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll 262 (394)
.+.+.+.+.+ +.++.|++..... .+ ....+...+++++++++.++++.+| +... .+.+..++
T Consensus 148 ~~~~~~~~~~~~~~~vi~~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~--~K~~~~li 212 (365)
T cd03807 148 AEYHQAIGYPPKKIVVIPNGVDTERF--SP----------DLDARARLREELGLPEDTFLIGIVA-RLHP--QKDHATLL 212 (365)
T ss_pred HHHHHHcCCChhheeEeCCCcCHHhc--CC----------cccchHHHHHhcCCCCCCeEEEEec-ccch--hcCHHHHH
Confidence 8888776653 5567776543221 11 1123445667889988777666654 3332 23467788
Q ss_pred HHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhh-cCCC--CEEEecCCCcchHHHHHHHcccceehhh-----HHHHHH
Q 016179 263 KTVELLKDSFPELITVIHVAPNRHVENYITGLIQ-KWPV--PSILVPGGSSNLKYDAFSASRVALCTSG-----TVAVEL 334 (394)
Q Consensus 263 ~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~-~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~SG-----t~tlEa 334 (394)
+++..+.++.+++++++++.+... ...+.... +.+. ++.+. +. .+++.++|+.||+++..|. .+.+||
T Consensus 213 ~a~~~l~~~~~~~~l~i~G~~~~~--~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea 288 (365)
T cd03807 213 RAAALLLKKFPNARLLLVGDGPDR--ANLELLALKELGLEDKVILL-GE-RSDVPALLNALDVFVLSSLSEGFPNVLLEA 288 (365)
T ss_pred HHHHHHHHhCCCeEEEEecCCcch--hHHHHHHHHhcCCCceEEEc-cc-cccHHHHHHhCCEEEeCCccccCCcHHHHH
Confidence 999988777788998888765322 22333332 3222 35555 33 5789999999999999884 455699
Q ss_pred HHcCCCEEEEEcCChHHHHHH
Q 016179 335 QLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 335 ~a~G~P~Iv~y~~~~~~~~~a 355 (394)
+++|+|+|+ .+.+.....+.
T Consensus 289 ~a~g~PvI~-~~~~~~~e~~~ 308 (365)
T cd03807 289 MACGLPVVA-TDVGDNAELVG 308 (365)
T ss_pred HhcCCCEEE-cCCCChHHHhh
Confidence 999999886 56665555554
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-12 Score=127.51 Aligned_cols=157 Identities=11% Similarity=0.135 Sum_probs=100.4
Q ss_pred hhhheeecCcccHHHHHhcC----CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC
Q 016179 174 FVDHILCILPNEEAICRLNG----LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS 249 (394)
Q Consensus 174 ~~d~v~~~~p~~~~~~~~~g----~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS 249 (394)
..+.+++.++..++.+.+.. .++.+++||+...... +.++...+++++++++.+++++.+.+
T Consensus 135 ~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~~~~~ 200 (365)
T cd03825 135 LNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFR--------------PRDKREARKRLGLPADKKIILFGAVG 200 (365)
T ss_pred CCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccC--------------CCcHHHHHHHhCCCCCCeEEEEEecC
Confidence 34566777777777766543 3577889987554321 23456677888988877655553332
Q ss_pred cHHHHHhhHHHHHHHHHHhhhh-CCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC--cchHHHHHHHcccceeh
Q 016179 250 RLQEVARMLPIFAKTVELLKDS-FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS--SNLKYDAFSASRVALCT 326 (394)
Q Consensus 250 rg~ei~~~l~~ll~a~~~l~~~-~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~--~~~~~~~~~~ADl~I~~ 326 (394)
.. ...+....++++++.+.++ .+++++++++..... . .. ....++.+. |+. .+++.++|+.||+++..
T Consensus 201 ~~-~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~--~--~~---~~~~~v~~~-g~~~~~~~~~~~~~~ad~~l~p 271 (365)
T cd03825 201 GT-DPRKGFDELIEALKRLAERWKDDIELVVFGASDPE--I--PP---DLPFPVHYL-GSLNDDESLALIYSAADVFVVP 271 (365)
T ss_pred CC-ccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh--h--hc---cCCCceEec-CCcCCHHHHHHHHHhCCEEEec
Confidence 22 1233467788898888654 467888877765321 1 11 122245554 332 23688999999999998
Q ss_pred h-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 327 S-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 327 S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
| |.+++||+++|+|+|. ++.+.....+
T Consensus 272 s~~e~~g~~~~Eam~~g~PvI~-~~~~~~~e~~ 303 (365)
T cd03825 272 SLQENFPNTAIEALACGTPVVA-FDVGGIPDIV 303 (365)
T ss_pred cccccccHHHHHHHhcCCCEEE-ecCCCChhhe
Confidence 8 6677799999999775 5666655544
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.1e-13 Score=133.13 Aligned_cols=272 Identities=13% Similarity=0.122 Sum_probs=153.4
Q ss_pred eEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEE-Ee---cChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 33 RVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFS-GV---GGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 33 kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~-g~---gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
.|.|=+.+.| +.. +..++++|++.+|+ ++++ .. .|..+.+...........+ .+ +. -..
T Consensus 52 ~iW~Ha~s~G-e~~~~~~l~~~l~~~~~~-~~i~~t~~t~~~~~~~~~~~~~~~~~~~~---P~-d~----------~~~ 115 (425)
T PRK05749 52 LIWFHAVSVG-ETRAAIPLIRALRKRYPD-LPILVTTMTPTGSERAQALFGDDVEHRYL---PY-DL----------PGA 115 (425)
T ss_pred eEEEEeCCHH-HHHHHHHHHHHHHHhCCC-CcEEEeCCCccHHHHHHHhcCCCceEEEe---cC-Cc----------HHH
Confidence 3667666665 666 77899999998885 6543 22 2233322211110000001 11 10 023
Q ss_pred HHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC---c--cccccCcchHHHHHHHhhhheeecC
Q 016179 108 TIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP---S--FWAWKGGEARLKNLAAFVDHILCIL 182 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~---~--~wa~~~g~~r~~~l~~~~d~v~~~~ 182 (394)
+.+++++++||+++++.+...+.. ...+++. ++|+++..... + .|.+.. +..+++.+.+|.+++.+
T Consensus 116 ~~~~l~~~~Pd~v~~~~~~~~~~~-l~~~~~~------~ip~vl~~~~~~~~s~~~~~~~~--~~~r~~~~~~d~ii~~S 186 (425)
T PRK05749 116 VRRFLRFWRPKLVIIMETELWPNL-IAELKRR------GIPLVLANARLSERSFKRYQKFK--RFYRLLFKNIDLVLAQS 186 (425)
T ss_pred HHHHHHhhCCCEEEEEecchhHHH-HHHHHHC------CCCEEEEeccCChhhHHHHHHHH--HHHHHHHHhCCEEEECC
Confidence 456788999999998754323332 3333433 78965432111 1 111111 12234567799999999
Q ss_pred cccHHHHHhcCCC--eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHH
Q 016179 183 PNEEAICRLNGLA--ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260 (394)
Q Consensus 183 p~~~~~~~~~g~~--~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ 260 (394)
+..++.+.+.|++ +.++||.-.|.... .. ......+.+++++ ++.++++ .+|....+ ...
T Consensus 187 ~~~~~~l~~~g~~~~i~vi~n~~~d~~~~-~~----------~~~~~~~~r~~~~--~~~~vil-~~~~~~~~----~~~ 248 (425)
T PRK05749 187 EEDAERFLALGAKNEVTVTGNLKFDIEVP-PE----------LAARAATLRRQLA--PNRPVWI-AASTHEGE----EEL 248 (425)
T ss_pred HHHHHHHHHcCCCCCcEecccccccCCCC-hh----------hHHHHHHHHHHhc--CCCcEEE-EeCCCchH----HHH
Confidence 9999999888864 56778853332210 00 0012345666776 4556654 44544333 345
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCC---------------EEEecCCCcchHHHHHHHccccee
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVP---------------SILVPGGSSNLKYDAFSASRVALC 325 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~---------------v~~~~g~~~~~~~~~~~~ADl~I~ 325 (394)
++++++.+.++.|++++++++.+. +..+.+++.+++.++. +.+. +. .+++.++|+.||+++.
T Consensus 249 ll~A~~~l~~~~~~~~liivG~g~-~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~-~~-~~el~~~y~~aDi~~v 325 (425)
T PRK05749 249 VLDAHRALLKQFPNLLLILVPRHP-ERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLG-DT-MGELGLLYAIADIAFV 325 (425)
T ss_pred HHHHHHHHHHhCCCcEEEEcCCCh-hhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEE-ec-HHHHHHHHHhCCEEEE
Confidence 788888887777899988876542 2223455555544432 2222 21 3589999999999554
Q ss_pred -hh-----hHHHHHHHHcCCCEEEEEcCChH
Q 016179 326 -TS-----GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 326 -~S-----Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
.| |.+.+|+|++|+|+|....++..
T Consensus 326 ~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~ 356 (425)
T PRK05749 326 GGSLVKRGGHNPLEPAAFGVPVISGPHTFNF 356 (425)
T ss_pred CCCcCCCCCCCHHHHHHhCCCEEECCCccCH
Confidence 33 34556999999998875443433
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-12 Score=127.18 Aligned_cols=163 Identities=13% Similarity=0.160 Sum_probs=106.8
Q ss_pred HHHhhhheeecCcccHHHHHhc--CC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEE
Q 016179 171 LAAFVDHILCILPNEEAICRLN--GL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISL 245 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~--g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Ill 245 (394)
..+.+|.+++.++..++.+.+. ++ ++.++.|++...... +..+...+++++++++.++|+.
T Consensus 141 ~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~ 206 (388)
T TIGR02149 141 AIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYK--------------PDDGNVVLDRYGIDRSRPYILF 206 (388)
T ss_pred HHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcC--------------CCchHHHHHHhCCCCCceEEEE
Confidence 4677999999999988876543 33 256777776443221 1234567788999888887777
Q ss_pred ECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC--hHHHHHHHhhcCCC---CEEEecCCC-cchHHHHHHH
Q 016179 246 LPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH--VENYITGLIQKWPV---PSILVPGGS-SNLKYDAFSA 319 (394)
Q Consensus 246 lgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~--~~~~l~~~~~~~~~---~v~~~~g~~-~~~~~~~~~~ 319 (394)
+ | |-... +.+..++++++.+. ++.++++++++... +.+.+++...+.+. ++.++.++. .+++.++|++
T Consensus 207 ~-G-rl~~~-Kg~~~li~a~~~l~---~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 280 (388)
T TIGR02149 207 V-G-RITRQ-KGVPHLLDAVHYIP---KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSN 280 (388)
T ss_pred E-c-ccccc-cCHHHHHHHHHHHh---hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHh
Confidence 6 3 33222 34677888888874 36777776654321 22334444333322 355544432 4679999999
Q ss_pred cccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 320 SRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 320 ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
||++|..| |.+.+||+++|+|+|+ .+.+.....+
T Consensus 281 aDv~v~ps~~e~~g~~~lEA~a~G~PvI~-s~~~~~~e~i 319 (388)
T TIGR02149 281 AEVFVCPSIYEPLGIVNLEAMACGTPVVA-SATGGIPEVV 319 (388)
T ss_pred CCEEEeCCccCCCChHHHHHHHcCCCEEE-eCCCCHHHHh
Confidence 99999987 6777899999999886 5566655555
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.9e-12 Score=125.26 Aligned_cols=158 Identities=14% Similarity=0.138 Sum_probs=104.6
Q ss_pred HHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEEC
Q 016179 171 LAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLP 247 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illlg 247 (394)
+.+.+|.+++.++..++.+.+.|++ +.++.|.+..+.. .+. ....+...+++++++++.++|+. .
T Consensus 168 ~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~i~~-~ 235 (412)
T PRK10307 168 LLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARF--QPV---------ADADVDALRAQLGLPDGKKIVLY-S 235 (412)
T ss_pred HHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhc--CCC---------CccchHHHHHHcCCCCCCEEEEE-c
Confidence 4667999999999999988777653 5677777643321 110 00123457788999877666655 4
Q ss_pred CCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEEecCCC-cchHHHHHHHccccee
Q 016179 248 GSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGS-SNLKYDAFSASRVALC 325 (394)
Q Consensus 248 GSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~~~g~~-~~~~~~~~~~ADl~I~ 325 (394)
|+.+. .+.+..++++++.+.+ .+++++++++.+. . .+.+++..++.+. ++.+. |+. .+++.++|++||+.|.
T Consensus 236 G~l~~--~kg~~~li~a~~~l~~-~~~~~l~ivG~g~-~-~~~l~~~~~~~~l~~v~f~-G~~~~~~~~~~~~~aDi~v~ 309 (412)
T PRK10307 236 GNIGE--KQGLELVIDAARRLRD-RPDLIFVICGQGG-G-KARLEKMAQCRGLPNVHFL-PLQPYDRLPALLKMADCHLL 309 (412)
T ss_pred Ccccc--ccCHHHHHHHHHHhcc-CCCeEEEEECCCh-h-HHHHHHHHHHcCCCceEEe-CCCCHHHHHHHHHhcCEeEE
Confidence 55542 2346778899988754 5789999887653 2 3445555554333 46665 442 4689999999999887
Q ss_pred hh--h-------HHHHHHHHcCCCEEEEEc
Q 016179 326 TS--G-------TVAVELQLARLPCVVAYR 346 (394)
Q Consensus 326 ~S--G-------t~tlEa~a~G~P~Iv~y~ 346 (394)
.| + +..+|++++|+|+|....
T Consensus 310 ps~~e~~~~~~p~kl~eama~G~PVi~s~~ 339 (412)
T PRK10307 310 PQKAGAADLVLPSKLTNMLASGRNVVATAE 339 (412)
T ss_pred eeccCcccccCcHHHHHHHHcCCCEEEEeC
Confidence 55 2 223599999999887543
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=6e-12 Score=120.43 Aligned_cols=283 Identities=14% Similarity=0.055 Sum_probs=158.9
Q ss_pred eEEEEeCC--chHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHH
Q 016179 33 RVFIVAGE--VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETI 109 (394)
Q Consensus 33 kIlI~aG~--~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~ 109 (394)
||++.+.. .||+.. ...++++|.+.+.+ +.++......-.......... ..... ...............+.
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~-v~v~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~ 74 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYD-VTLVVLRDEGDYLELLPSNVK--LIPVR---VLKLKSLRDLLAILRLR 74 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCce-EEEEEcCCCCccccccccchh--hhcee---eeecccccchhHHHHHH
Confidence 46555544 456544 78899999776664 776665432211111110000 00000 00001111222344567
Q ss_pred HHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccccc-CcchH----HHHHHHhhhheeecCcc
Q 016179 110 EAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWK-GGEAR----LKNLAAFVDHILCILPN 184 (394)
Q Consensus 110 ~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~-~g~~r----~~~l~~~~d~v~~~~p~ 184 (394)
+++++.+||+|++.+. ..+..+ ..+..+. ++|++++. +..|... ..... ...+.+.+|.+++.++.
T Consensus 75 ~~~~~~~~dii~~~~~-~~~~~~-~~~~~~~-----~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 75 RLLRKEKPDVVISHLT-TTPNVL-ALLAARL-----GTKLIVWE--HNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred HHHHhcCCCEEEEcCc-cchhHH-HHHHhhc-----CCceEEEE--cCcchhhhccchhHHHHHHhhccccceEEEeccc
Confidence 7888889999998754 123322 2333221 46754332 2222111 10001 23356789999999999
Q ss_pred cHHHHHhcCC----CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHH
Q 016179 185 EEAICRLNGL----AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260 (394)
Q Consensus 185 ~~~~~~~~g~----~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ 260 (394)
.++.+.+.+. ++.++.||+....... ..... .+++.+.+.++++.+ |+.. +- +....
T Consensus 146 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~i~~~-g~~~-~~-k~~~~ 206 (353)
T cd03811 146 VKEDLLKLLGIPPDKIEVIYNPIDIEEIRA--------------LAEEP--LELGIPPDGPVILAV-GRLS-PQ-KGFDT 206 (353)
T ss_pred hhhhHHHhhcCCccccEEecCCcChhhcCc--------------ccchh--hhcCCCCCceEEEEE-ecch-hh-cChHH
Confidence 9888765432 4778888876543210 01111 034455555555555 4443 22 34667
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHHHH
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVE 333 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlE 333 (394)
++++++.+.++.+++++++++.+. . .+.+++...+.+. ++.+. ++ .+++.++++.||++|..| |++.+|
T Consensus 207 ~i~~~~~l~~~~~~~~l~i~G~~~-~-~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~~d~~i~ps~~e~~~~~~~E 282 (353)
T cd03811 207 LIRAFALLRKEGPDARLVILGDGP-L-REELEALAKELGLADRVHFL-GF-QSNPYPYLKAADLFVLSSRYEGFPNVLLE 282 (353)
T ss_pred HHHHHHHhhhcCCCceEEEEcCCc-c-HHHHHHHHHhcCCCccEEEe-cc-cCCHHHHHHhCCEEEeCcccCCCCcHHHH
Confidence 889999987766789988887653 2 2334444444332 45555 44 578999999999999887 556679
Q ss_pred HHHcCCCEEEEEcCChHHHHH
Q 016179 334 LQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 334 a~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++++|+|+|+ .+.+.....+
T Consensus 283 a~~~G~PvI~-~~~~~~~e~i 302 (353)
T cd03811 283 AMALGTPVVA-TDCPGPREIL 302 (353)
T ss_pred HHHhCCCEEE-cCCCChHHHh
Confidence 9999999876 5655655554
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.4e-12 Score=120.95 Aligned_cols=288 Identities=16% Similarity=0.116 Sum_probs=159.3
Q ss_pred eEEEEeCC----chHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 33 RVFIVAGE----VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 33 kIlI~aG~----~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
||++++.. .||+-. ...++++|.+.+.+ +.++................. .... ...........+.....
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~ 75 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHE-VYVVAPSYPGAPEEEEVVVVR--PFRV--PTFKYPDFRLPLPIPRA 75 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCe-EEEEeCCCCCCCccccccccc--cccc--ccchhhhhhccccHHHH
Confidence 46665544 356555 77899999987764 776655432221111000000 0000 00001111111222334
Q ss_pred HHHHHHhcCCCEEEEeCCCCchH-HHHHHHHHhccccCCCCCeEEEeecCcccc------------ccCcc--hHHHHHH
Q 016179 108 TIEAALLFRPHAVVTVDSKGFSF-RLLKQLRARYSHERLNGPAHFHYVAPSFWA------------WKGGE--ARLKNLA 172 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~~~f~~-~la~~l~~~~~~~~~~ip~~~~yv~~~~wa------------~~~g~--~r~~~l~ 172 (394)
+.+.+++.+||+|+..+ + +.. .++..+.++. ++|++..+ +..|. +.... ...+++.
T Consensus 76 ~~~~~~~~~~Div~~~~-~-~~~~~~~~~~~~~~-----~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (374)
T cd03817 76 LIIILKELGPDIVHTHT-P-FSLGLLGLRVARKL-----GIPVVATY--HTMYEDYTHYVPLGRLLARAVVRRKLSRRFY 146 (374)
T ss_pred HHHHHhhcCCCEEEECC-c-hhhhhHHHHHHHHc-----CCCEEEEe--cCCHHHHHHHHhcccchhHHHHHHHHHHHHh
Confidence 45567889999988754 3 332 2333333332 67854322 11110 00000 0112346
Q ss_pred HhhhheeecCcccHHHHHhcCCC--eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 173 AFVDHILCILPNEEAICRLNGLA--ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 173 ~~~d~v~~~~p~~~~~~~~~g~~--~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
+.+|.+++.++..++.+.+.+.+ +.++.+++...... .......+++++++++.++|+. .|+.
T Consensus 147 ~~~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~-~G~~ 211 (374)
T cd03817 147 NRCDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFE--------------PVDGDDERRKLGIPEDEPVLLY-VGRL 211 (374)
T ss_pred hhCCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccC--------------ccchhHHHHhcCCCCCCeEEEE-Eeee
Confidence 67999999999988888877654 45666665433221 1122334566777776665555 4554
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh-
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS- 327 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S- 327 (394)
+. .+....++++++.+.++.+++++++.+++. ..+.+++...+.+ .++.+......+++.++|+.||+++..|
T Consensus 212 ~~--~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~ 287 (374)
T cd03817 212 AK--EKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST 287 (374)
T ss_pred ec--ccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc
Confidence 42 234567888888887766789988887653 2334454443332 2466553221468999999999999887
Q ss_pred ----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 ----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 ----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|...+|++++|+|+|+ .+.+.....+
T Consensus 288 ~e~~~~~~~Ea~~~g~PvI~-~~~~~~~~~i 317 (374)
T cd03817 288 TETQGLVLLEAMAAGLPVVA-VDAPGLPDLV 317 (374)
T ss_pred ccCcChHHHHHHHcCCcEEE-eCCCChhhhe
Confidence 3455699999999886 5555555444
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-11 Score=119.11 Aligned_cols=210 Identities=15% Similarity=0.114 Sum_probs=124.7
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcc
Q 016179 105 LKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPN 184 (394)
Q Consensus 105 ~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~ 184 (394)
...+.+++++.+||+|++.....+...+...++.. ++|++++. +..|...+ ......+..|.+++.++.
T Consensus 85 ~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~------~~~~i~~~--hd~~~~~~---~~~~~~~~~d~ii~~s~~ 153 (359)
T cd03823 85 VAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDR------GIPIVLTL--HDYWLICP---RQGLFKKGGDAVIAPSRF 153 (359)
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhc------CCCEEEEE--eeeeeecc---hhhhhccCCCEEEEeCHH
Confidence 45567888899999998765322333333333333 67864332 33332221 122223344999999999
Q ss_pred cHHHHHhcCC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHH
Q 016179 185 EEAICRLNGL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261 (394)
Q Consensus 185 ~~~~~~~~g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~l 261 (394)
..+.+.+.+. ++.++.|++...... ... + +.+.+.++++.+ |+... .+.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~vi~n~~~~~~~~---------------~~~-----~-~~~~~~~~i~~~-G~~~~--~k~~~~l 209 (359)
T cd03823 154 LLDRYVANGLFAEKISVIRNGIDLDRAK---------------RPR-----R-APPGGRLRFGFI-GQLTP--HKGVDLL 209 (359)
T ss_pred HHHHHHHcCCCccceEEecCCcChhhcc---------------ccc-----c-CCCCCceEEEEE-ecCcc--ccCHHHH
Confidence 9888877765 466777776443321 000 0 233455555555 44332 2335678
Q ss_pred HHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh------hHHHHHHH
Q 016179 262 AKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS------GTVAVELQ 335 (394)
Q Consensus 262 l~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S------Gt~tlEa~ 335 (394)
+++++.+.+ +++++++.+..... .. ..... ....++.+......+++.++|+.||++|..| |.+.+|++
T Consensus 210 i~~~~~l~~--~~~~l~i~G~~~~~-~~-~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~ 284 (359)
T cd03823 210 LEAFKRLPR--GDIELVIVGNGLEL-EE-ESYEL-EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREAL 284 (359)
T ss_pred HHHHHHHHh--cCcEEEEEcCchhh-hH-HHHhh-cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHH
Confidence 888888865 68898887765322 11 11111 2223566653321478999999999999876 23456999
Q ss_pred HcCCCEEEEEcCChHHHHHH
Q 016179 336 LARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 336 a~G~P~Iv~y~~~~~~~~~a 355 (394)
++|+|+|. .+.+.....+.
T Consensus 285 a~G~Pvi~-~~~~~~~e~i~ 303 (359)
T cd03823 285 AAGVPVIA-SDIGGMAELVR 303 (359)
T ss_pred HCCCCEEE-CCCCCHHHHhc
Confidence 99999886 56666555553
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-11 Score=123.76 Aligned_cols=301 Identities=11% Similarity=0.000 Sum_probs=157.6
Q ss_pred CCceEEEEeCC-chHHHHHHHHHHHHHhcCCCCeEEEEecChh-h----HhccCccc-cccCcceeccHHHhhhhHHHHH
Q 016179 30 GELRVFIVAGE-VSGDSIGSRLMSAMKKLAPLPVSFSGVGGSM-M----SEQGMKSL-FPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 30 ~~~kIlI~aG~-~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~-m----~~~g~~~~-~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
.++||.+.+-. .+++.....+++.|.+++.+ +.+++..+.. . +..|+... ++...-........+..+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~-V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWK-VDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVL 80 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCce-EEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHHHHHH
Confidence 35677654444 45566677899999888775 8877654421 1 12233321 1111100011112222222222
Q ss_pred HHHHHHHH-HHHhcCCCEEEEeCCCCchHHH-HHHHHHhccccCCCCCeEEEeecCcccc-------c-cCcc----hHH
Q 016179 103 VRLKETIE-AALLFRPHAVVTVDSKGFSFRL-LKQLRARYSHERLNGPAHFHYVAPSFWA-------W-KGGE----ARL 168 (394)
Q Consensus 103 ~~~~~~~~-~i~~~~PD~Vi~~~~~~f~~~l-a~~l~~~~~~~~~~ip~~~~yv~~~~wa-------~-~~g~----~r~ 168 (394)
..+.++.. +++..+||+|+++..+.++..+ +..++++. +.|+++. .+..|- + .... .+.
T Consensus 81 ~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~-----~~~~V~~--~h~~~~~~~~~~~~~~~~~~~~~~~~ 153 (415)
T cd03816 81 WQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLR-----RTKLIID--WHNYGYTILALKLGENHPLVRLAKWY 153 (415)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh-----CCeEEEE--cCCchHHHHhcccCCCCHHHHHHHHH
Confidence 22223322 4566789999976434444333 32223221 5686432 233331 0 0000 011
Q ss_pred H-HHHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHh------------
Q 016179 169 K-NLAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKN------------ 232 (394)
Q Consensus 169 ~-~l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~------------ 232 (394)
+ .+.+.+|.+++.++..++.+.++|.+ +.++-|-..+.+.... ....+...++
T Consensus 154 e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~~~f~p~~-----------~~~~~~~~~~~~~~~~~~~~~~ 222 (415)
T cd03816 154 EKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPLP-----------LEEKHELFLKLAKTFLTRELRI 222 (415)
T ss_pred HHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCHHHceeCc-----------HHHHHHHHHhcccccccccccc
Confidence 1 24677999999999999888765543 4444332112221100 0000011110
Q ss_pred -hcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh------hCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEE
Q 016179 233 -KYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD------SFPELITVIHVAPNRHVENYITGLIQKWPV-PSIL 304 (394)
Q Consensus 233 -~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~------~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~ 304 (394)
..++.++.+.+++..|..+ +. +.+..+++|++.+.+ ..|++++++++++. . ++.+++..++.+. ++.+
T Consensus 223 ~~~~~~~~~~~vi~~~grl~-~~-K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~-~-~~~l~~~~~~~~l~~~~~ 298 (415)
T cd03816 223 GAVQLSEERPALLVSSTSWT-PD-EDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP-L-KEKYLERIKELKLKKVTI 298 (415)
T ss_pred ccceecCCCceEEEEecccc-CC-CCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-c-HHHHHHHHHHcCCCcEEE
Confidence 1233344555555444433 22 346778899988864 23679999888763 2 3456666665554 3555
Q ss_pred ecCCC-cchHHHHHHHcccceeh----h----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 305 VPGGS-SNLKYDAFSASRVALCT----S----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 305 ~~g~~-~~~~~~~~~~ADl~I~~----S----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.|+. .++++++|++||++++. + |...+|+|+||+|+|. +..+.....+
T Consensus 299 ~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~-s~~~~~~eiv 356 (415)
T cd03816 299 RTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCA-LDFKCIDELV 356 (415)
T ss_pred EcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEE-eCCCCHHHHh
Confidence 54432 57899999999999852 2 2345699999999876 5665555544
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-12 Score=125.26 Aligned_cols=277 Identities=14% Similarity=0.114 Sum_probs=152.7
Q ss_pred EeCCchH-HHHHHHHHHHHHhcCCCCeEEEEecC-hhh----HhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 37 VAGEVSG-DSIGSRLMSAMKKLAPLPVSFSGVGG-SMM----SEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 37 ~aG~~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg-~~m----~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
.+.+.|| ..+...++++|.+.+.+ +.++.... ..+ .+.|+... . +...+ .. .+..+.++.+
T Consensus 9 ~~~~~GG~e~~~~~l~~~l~~~~~~-~~v~~~~~~~~~~~~~~~~~i~~~-~---~~~~~----~~----~~~~~~~l~~ 75 (374)
T TIGR03088 9 YRFDVGGLENGLVNLINHLPADRYR-HAVVALTEVSAFRKRIQRPDVAFY-A---LHKQP----GK----DVAVYPQLYR 75 (374)
T ss_pred CCCCCCcHHHHHHHHHhhccccccc-eEEEEcCCCChhHHHHHhcCceEE-E---eCCCC----CC----ChHHHHHHHH
Confidence 3444455 45588899999775443 55665432 122 23344321 1 11000 01 1233456778
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc--cccccCcc---hHHHH-HHHhhhheeecCcc
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS--FWAWKGGE---ARLKN-LAAFVDHILCILPN 184 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~--~wa~~~g~---~r~~~-l~~~~d~v~~~~p~ 184 (394)
++++++||+|++.+...+...+++++ . ++|..+|- .+. .+.+.... ...++ ..+.+|.+++.++.
T Consensus 76 ~l~~~~~Divh~~~~~~~~~~~~~~~--~------~~~~~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~ 146 (374)
T TIGR03088 76 LLRQLRPDIVHTRNLAALEAQLPAAL--A------GVPARIHG-EHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRD 146 (374)
T ss_pred HHHHhCCCEEEEcchhHHHHHHHHHh--c------CCCeEEEe-ecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHH
Confidence 88999999999764322222222221 1 56654442 221 11111000 01222 35678999999998
Q ss_pred cHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHH
Q 016179 185 EEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260 (394)
Q Consensus 185 ~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ 260 (394)
.++.+.+ .+++ +.++.|++..... .+ ...++...+++...+++.++|+.+ |.. .+ .+....
T Consensus 147 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~--~~----------~~~~~~~~~~~~~~~~~~~~i~~v-Grl-~~-~Kg~~~ 211 (374)
T TIGR03088 147 LEDWLRGPVKVPPAKIHQIYNGVDTERF--HP----------SRGDRSPILPPDFFADESVVVGTV-GRL-QA-VKDQPT 211 (374)
T ss_pred HHHHHHHhcCCChhhEEEeccCcccccc--CC----------CccchhhhhHhhcCCCCCeEEEEE-ecC-Cc-ccCHHH
Confidence 8887754 4543 5667777744321 11 001122223333344555555554 333 22 234677
Q ss_pred HHHHHHHhhhhCC----CeEEEEEeCCCcChHHHHHHHhhcCCCC-EEEecCCCcchHHHHHHHcccceehh-----hHH
Q 016179 261 FAKTVELLKDSFP----ELITVIHVAPNRHVENYITGLIQKWPVP-SILVPGGSSNLKYDAFSASRVALCTS-----GTV 330 (394)
Q Consensus 261 ll~a~~~l~~~~~----~~~~vi~~g~~~~~~~~l~~~~~~~~~~-v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~ 330 (394)
+++++..+.++.+ ++++++++.+. . .+.+++..++.+.. ...+.|+ .+|+.++|+.||++|..| |.+
T Consensus 212 li~a~~~l~~~~~~~~~~~~l~i~G~g~-~-~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~adi~v~pS~~Eg~~~~ 288 (374)
T TIGR03088 212 LVRAFALLVRQLPEGAERLRLVIVGDGP-A-RGACEQMVRAAGLAHLVWLPGE-RDDVPALMQALDLFVLPSLAEGISNT 288 (374)
T ss_pred HHHHHHHHHHhCcccccceEEEEecCCc-h-HHHHHHHHHHcCCcceEEEcCC-cCCHHHHHHhcCEEEeccccccCchH
Confidence 8889888866544 68888887653 2 23455555554432 2233454 578999999999999887 556
Q ss_pred HHHHHHcCCCEEEEEcCChHHHHH
Q 016179 331 AVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 331 tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.+||+++|+|+|+ .+.+.....+
T Consensus 289 ~lEAma~G~Pvv~-s~~~g~~e~i 311 (374)
T TIGR03088 289 ILEAMASGLPVIA-TAVGGNPELV 311 (374)
T ss_pred HHHHHHcCCCEEE-cCCCCcHHHh
Confidence 6799999999886 5555555444
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-11 Score=119.94 Aligned_cols=278 Identities=12% Similarity=0.035 Sum_probs=154.6
Q ss_pred eEEEEeCC--chHHH-HHHHHHHHHHhcCCCCeEEEEecChh--h----HhccCccccccCcceeccHHHhhhhHHHHHH
Q 016179 33 RVFIVAGE--VSGDS-IGSRLMSAMKKLAPLPVSFSGVGGSM--M----SEQGMKSLFPMEDIAVMGIWELLPHIYKFRV 103 (394)
Q Consensus 33 kIlI~aG~--~sGh~-~a~~l~~~L~~~~~~~~~~~g~gg~~--m----~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~ 103 (394)
||++++.. .||.- +...++++|.+.+.+ +.++...+.. . ...++... . +. .... ....
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~-v~~i~~~~~~~~~~~~~~~~~~~~~-~---~~-----~~~~---~~~~ 67 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQ-FDFLVTSKEEGDYDDEIEKLGGKIY-Y---IP-----ARKK---NPLK 67 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceE-EEEEEeCCCCcchHHHHHHcCCeEE-E---ec-----CCCc---cHHH
Confidence 46655553 45544 478899999866554 6666543321 1 11222211 0 00 0001 1122
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHH------HHHHHhhhh
Q 016179 104 RLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARL------KNLAAFVDH 177 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~------~~l~~~~d~ 177 (394)
.+..+.+++++.+||+|++.+.. ...++..+.++. +.|.++.......|......... ..+.+.+|.
T Consensus 68 ~~~~~~~~~~~~~~Dvv~~~~~~--~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (358)
T cd03812 68 YFKKLYKLIKKNKYDIVHVHGSS--ASGFILLAAKKA-----GVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATD 140 (358)
T ss_pred HHHHHHHHHhcCCCCEEEEeCcc--hhHHHHHHHhhC-----CCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCE
Confidence 23345567788999999986432 223333333221 45643321111111111100011 224667899
Q ss_pred eeecCcccHHHHHhc--CCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 178 ILCILPNEEAICRLN--GLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 178 v~~~~p~~~~~~~~~--g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
+++.++...+.+... .-++.++-|++........ +..++ .+++.+..++.++|+..| +-. . .
T Consensus 141 ~i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~------------~~~~~-~~~~~~~~~~~~~i~~vG-r~~-~-~ 204 (358)
T cd03812 141 YLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFN------------EEIRK-KRRELGILEDKFVIGHVG-RFS-E-Q 204 (358)
T ss_pred EEEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCC------------chhhh-HHHHcCCCCCCEEEEEEe-ccc-c-c
Confidence 999999888776542 2346666666543221110 11122 245666777777666653 332 2 2
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh-----h
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS-----G 328 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----G 328 (394)
+.+..+++++..+.++.+++++++++.+.. .+.+++..++.+ .++.+. |+ .+++.++++.||++|..| |
T Consensus 205 Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~adi~v~ps~~E~~~ 280 (358)
T cd03812 205 KNHEFLIEIFAELLKKNPNAKLLLVGDGEL--EEEIKKKVKELGLEDKVIFL-GV-RNDVPELLQAMDVFLFPSLYEGLP 280 (358)
T ss_pred cChHHHHHHHHHHHHhCCCeEEEEEeCCch--HHHHHHHHHhcCCCCcEEEe-cc-cCCHHHHHHhcCEEEecccccCCC
Confidence 346778899999987788999999886532 334454444433 246665 44 578999999999999988 4
Q ss_pred HHHHHHHHcCCCEEEEEcCChHH
Q 016179 329 TVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 329 t~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
.+.+|||++|+|+|.. ..+...
T Consensus 281 ~~~lEAma~G~PvI~s-~~~~~~ 302 (358)
T cd03812 281 LVLIEAQASGLPCILS-DTITKE 302 (358)
T ss_pred HHHHHHHHhCCCEEEE-cCCchh
Confidence 5556999999998864 444433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-11 Score=114.96 Aligned_cols=280 Identities=13% Similarity=0.062 Sum_probs=155.5
Q ss_pred hH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHhcCCCEE
Q 016179 42 SG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV 120 (394)
Q Consensus 42 sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~~~PD~V 120 (394)
|| ..+...++++|.+.+.+ +.++..................... .. ................+.+.+++.+||+|
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~-v~i~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dii 89 (374)
T cd03801 14 GGAERHVLELARALAARGHE-VTVLTPGDGGLPDEEEVGGIVVVRP--PP-LLRVRRLLLLLLLALRLRRLLRRERFDVV 89 (374)
T ss_pred CcHhHHHHHHHHHHHhcCce-EEEEecCCCCCCceeeecCcceecC--Cc-ccccchhHHHHHHHHHHHHHhhhcCCcEE
Confidence 44 44488899999876654 7766654322111100000000000 00 01111111223334556777888899999
Q ss_pred EEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc----------chHHHHHHHhhhheeecCcccHHHHH
Q 016179 121 VTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG----------EARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 121 i~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g----------~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
++.+........ .+.+. .++|++++. +..|..... ......+.+.+|.+++.++...+.+.
T Consensus 90 ~~~~~~~~~~~~--~~~~~-----~~~~~i~~~--h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~ 160 (374)
T cd03801 90 HAHDWLALLAAA--LAARL-----LGIPLVLTV--HGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR 160 (374)
T ss_pred EEechhHHHHHH--HHHHh-----cCCcEEEEe--ccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHH
Confidence 987532222221 22222 167864433 222221110 00112357789999999999998887
Q ss_pred hcC-C---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHH
Q 016179 191 LNG-L---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 266 (394)
Q Consensus 191 ~~g-~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~ 266 (394)
+.+ . ++.++.||+...... ......+.....+.+.++++.+| +.. . .+.+..+++++.
T Consensus 161 ~~~~~~~~~~~~i~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~g-~~~-~-~k~~~~~i~~~~ 222 (374)
T cd03801 161 ELGGVPPEKITVIPNGVDTERFR---------------PAPRAARRRLGIPEDEPVILFVG-RLV-P-RKGVDLLLEALA 222 (374)
T ss_pred hcCCCCCCcEEEecCcccccccC---------------ccchHHHhhcCCcCCCeEEEEec-chh-h-hcCHHHHHHHHH
Confidence 654 3 477888887543221 00122334445555666666654 333 2 234567888998
Q ss_pred HhhhhCCCeEEEEEeCCCcChHHHHHHHhhc--CCCCEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCC
Q 016179 267 LLKDSFPELITVIHVAPNRHVENYITGLIQK--WPVPSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARL 339 (394)
Q Consensus 267 ~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~ 339 (394)
.+.+..+++++++.+.+. ..+.+++...+ ...++.+......+++.++|+.||++|..+ |+..+||+++|+
T Consensus 223 ~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~ 300 (374)
T cd03801 223 KLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL 300 (374)
T ss_pred HHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCC
Confidence 887777789988887542 23344443322 222466553321378999999999999876 445569999999
Q ss_pred CEEEEEcCChHHHHHH
Q 016179 340 PCVVAYRAHFLTEWFI 355 (394)
Q Consensus 340 P~Iv~y~~~~~~~~~a 355 (394)
|+|+ .+.+....++.
T Consensus 301 pvI~-~~~~~~~~~~~ 315 (374)
T cd03801 301 PVVA-SDVGGIPEVVE 315 (374)
T ss_pred cEEE-eCCCChhHHhc
Confidence 9776 56566555553
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-11 Score=115.98 Aligned_cols=278 Identities=15% Similarity=0.078 Sum_probs=152.4
Q ss_pred eEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChh---hHhccCccccccCcceeccHHHhhhhHHHHHHHHHHH
Q 016179 33 RVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSM---MSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKET 108 (394)
Q Consensus 33 kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~---m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~ 108 (394)
||++++...+|+.. ...++++|++.+.+ +.++...... ....++... .++... ........+..+.++
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~-v~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~ 72 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYE-VHVVAPPGDELEELEALGVKVI----PIPLDR---RGINPFKDLKALLRL 72 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCe-eEEEecCCCcccccccCCceEE----eccccc---cccChHhHHHHHHHH
Confidence 57777777667655 78899999877664 7766554322 223333221 111110 001111223344567
Q ss_pred HHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcc------hHH-HHHHHhhhheeec
Q 016179 109 IEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGE------ARL-KNLAAFVDHILCI 181 (394)
Q Consensus 109 ~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~------~r~-~~l~~~~d~v~~~ 181 (394)
.+.+++.+||+|++... .+..++....+.. +.|.+++......|...... .+. +.+.+.+|.+++.
T Consensus 73 ~~~~~~~~~dvv~~~~~--~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 145 (359)
T cd03808 73 YRLLRKERPDIVHTHTP--KPGILGRLAARLA-----GVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQ 145 (359)
T ss_pred HHHHHhcCCCEEEEccc--cchhHHHHHHHHc-----CCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEc
Confidence 78888999999987642 1222222222211 22323443221111111000 011 2246678999999
Q ss_pred CcccHHHHHhcCC-----CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHh
Q 016179 182 LPNEEAICRLNGL-----AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 256 (394)
Q Consensus 182 ~p~~~~~~~~~g~-----~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~ 256 (394)
++...+.+.+.+. .+.+.++++...... . .... .+++.++++.+| +-. -.+
T Consensus 146 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~------~~~~~~~i~~~G-~~~--~~k 201 (359)
T cd03808 146 NEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFS--P-------------SPEP------IPEDDPVFLFVA-RLL--KDK 201 (359)
T ss_pred CHHHHHHHHHhcCCCcCceEEecCCCCChhhcC--c-------------cccc------cCCCCcEEEEEe-ccc--ccc
Confidence 9999888876653 133445544332211 0 0000 133455566654 332 123
Q ss_pred hHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHH-hhcCC--CCEEEecCCCcchHHHHHHHcccceehh-----h
Q 016179 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGL-IQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS-----G 328 (394)
Q Consensus 257 ~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~-~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----G 328 (394)
.+..++++++.+.+..+++++++++....... .... ..... .++.+.. + .+++.++|+.||++|..| |
T Consensus 202 ~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~--~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~~adi~i~ps~~e~~~ 277 (359)
T cd03808 202 GIDELLEAARILKAKGPNVRLLLVGDGDEENP--AAILEIEKLGLEGRVEFLG-F-RDDVPELLAAADVFVLPSYREGLP 277 (359)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEcCCCcchh--hHHHHHHhcCCcceEEEee-c-cccHHHHHHhccEEEecCcccCcc
Confidence 46678889988877678899998887643221 1111 22222 2466653 3 578999999999999988 4
Q ss_pred HHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 329 TVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 329 t~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
...+||+++|+|+|+ .+.+.....+
T Consensus 278 ~~~~Ea~~~G~Pvi~-s~~~~~~~~i 302 (359)
T cd03808 278 RVLLEAMAMGRPVIA-TDVPGCREAV 302 (359)
T ss_pred hHHHHHHHcCCCEEE-ecCCCchhhh
Confidence 566699999999886 4554444444
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-11 Score=125.71 Aligned_cols=120 Identities=14% Similarity=0.179 Sum_probs=85.2
Q ss_pred hHHHHhhcCCCC--CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVPS--GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~~--~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|+++ +.++|+.+| |-.+.| .+..++++++.+.+. ++++++++.+...+++.+++...+.+.++.+
T Consensus 276 k~~l~~~~gl~~~~~~~~i~~vG--rl~~~K-g~~~li~a~~~l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~ 350 (473)
T TIGR02095 276 KEALQEELGLPVDDDVPLFGVIS--RLTQQK-GVDLLLAALPELLEL--GGQLVVLGTGDPELEEALRELAERYPGNVRV 350 (473)
T ss_pred HHHHHHHcCCCccCCCCEEEEEe--cCcccc-ChHHHHHHHHHHHHc--CcEEEEECCCCHHHHHHHHHHHHHCCCcEEE
Confidence 466888999986 677777763 443333 467889999988753 5899988876434455566655555545666
Q ss_pred ecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHH
Q 016179 305 VPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~ 352 (394)
..++..++++.+|++||+++..| |.+.+|||++|+|+|+ .+.+.+..
T Consensus 351 ~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~e 402 (473)
T TIGR02095 351 IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLAD 402 (473)
T ss_pred EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCccc
Confidence 65543344778999999999988 6777899999999886 55555443
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-11 Score=124.44 Aligned_cols=281 Identities=14% Similarity=0.114 Sum_probs=154.5
Q ss_pred eEEEEeC----CchH-HHHHHHHHHHHHhcCCCCeEEEEecCh-h----hHhccCccccccCcceeccHHHhhhhHHHHH
Q 016179 33 RVFIVAG----EVSG-DSIGSRLMSAMKKLAPLPVSFSGVGGS-M----MSEQGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 33 kIlI~aG----~~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~-~----m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
||++++. ..|| ..+...++++|.+++.+ +.++....+ . ....|++. ..++..+.... ..+..+.
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~i~v----~~~p~~~~~~~-~~~~~~~ 74 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHK-VVVITHAYGNRVGIRYLTNGLKV----YYLPFVVFYNQ-STLPTFF 74 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCe-eEEEeccCCcCCCcccccCceeE----EEecceeccCC-ccccchh
Confidence 4555555 2445 55678899999988775 776654311 1 11223221 11111111100 0011122
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccC----cchH-HHHHHHhhhh
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG----GEAR-LKNLAAFVDH 177 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~----g~~r-~~~l~~~~d~ 177 (394)
..+..+.+.+++++||+|++.+........+..+.+.. ++|+++. .+..|.... ...+ .+...+.+|.
T Consensus 75 ~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~-----~~~~v~t--~h~~~~~~~~~~~~~~~~~~~~~~~~d~ 147 (398)
T cd03796 75 GTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTM-----GLKTVFT--DHSLFGFADASSIHTNKLLRFSLADVDH 147 (398)
T ss_pred hhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhc-----CCcEEEE--ecccccccchhhHHhhHHHHHhhccCCE
Confidence 33445667788899999998763222221222222221 6786433 233221110 0011 2234678999
Q ss_pred eeecCcccHHHH-HhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH
Q 016179 178 ILCILPNEEAIC-RLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE 253 (394)
Q Consensus 178 v~~~~p~~~~~~-~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e 253 (394)
+++.++...+.+ .+.+++ +.++-|.+.... +.+ +... .+++.++|+.. | |..+
T Consensus 148 ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~--f~~-------------~~~~------~~~~~~~i~~~-g-rl~~ 204 (398)
T cd03796 148 VICVSHTSKENTVLRASLDPERVSVIPNAVDSSD--FTP-------------DPSK------RDNDKITIVVI-S-RLVY 204 (398)
T ss_pred EEEecHhHhhHHHHHhCCChhhEEEEcCccCHHH--cCC-------------Cccc------CCCCceEEEEE-e-ccch
Confidence 999998877643 333432 455555443221 111 0000 23455566665 3 3332
Q ss_pred HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCC-cchHHHHHHHcccceehh---
Q 016179 254 VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGS-SNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 254 i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~-~~~~~~~~~~ADl~I~~S--- 327 (394)
- +.+..++++++.+.++.+++++++++.+. . .+.+++..++++. ++.+. |+. .+++.++|++||++|..|
T Consensus 205 ~-Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~-~~~l~~~~~~~~l~~~v~~~-G~~~~~~~~~~l~~ad~~v~pS~~E 280 (398)
T cd03796 205 R-KGIDLLVGIIPEICKKHPNVRFIIGGDGP-K-RILLEEMREKYNLQDRVELL-GAVPHERVRDVLVQGHIFLNTSLTE 280 (398)
T ss_pred h-cCHHHHHHHHHHHHhhCCCEEEEEEeCCc-h-HHHHHHHHHHhCCCCeEEEe-CCCCHHHHHHHHHhCCEEEeCChhh
Confidence 2 34667889999888777899999888653 2 3445555555443 46665 432 468999999999999988
Q ss_pred --hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 --GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 --Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+|||+||+|+|+ .+.+.....+
T Consensus 281 ~~g~~~~EAma~G~PVI~-s~~gg~~e~i 308 (398)
T cd03796 281 AFCIAIVEAASCGLLVVS-TRVGGIPEVL 308 (398)
T ss_pred ccCHHHHHHHHcCCCEEE-CCCCCchhhe
Confidence 5566699999999876 5555554444
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=9e-12 Score=120.83 Aligned_cols=283 Identities=17% Similarity=0.119 Sum_probs=152.6
Q ss_pred eEEEEeCC----chHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 33 RVFIVAGE----VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 33 kIlI~aG~----~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
||++++.. .||+.. ...++++|.+++.+ +.++.......... ..............+. ..+ ........
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~-v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~---~~~~~~~~ 74 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHE-VLVIAPGPFRESEG-PARVVPVPSVPLPGYP-EIR---LALPPRRR 74 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCE-EEEEeCCchhhccC-CCCceeecccccCccc-ceE---ecccchhh
Confidence 45555533 256555 77899999987775 77776553321111 0000000011100110 000 01112334
Q ss_pred HHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccc-ccC------c----chHHHHHHHhhh
Q 016179 108 TIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA-WKG------G----EARLKNLAAFVD 176 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa-~~~------g----~~r~~~l~~~~d 176 (394)
+.+.+++.+||+|++.....+... +..+.++. ++|+++++. . .|. +.. . ....+++.+.+|
T Consensus 75 ~~~~~~~~~pdii~~~~~~~~~~~-~~~~~~~~-----~~~~i~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 146 (364)
T cd03814 75 VRRLLDAFAPDVVHIATPGPLGLA-ALRAARRL-----GIPVVTSYH-T-DFPEYLRYYGLGPLSWLAWAYLRWFHNRAD 146 (364)
T ss_pred HHHHHHhcCCCEEEEeccchhhHH-HHHHHHHc-----CCCEEEEEe-c-ChHHHhhhcccchHhHhhHHHHHHHHHhCC
Confidence 566678899999987642222222 22222221 688654442 1 111 000 0 001233567799
Q ss_pred heeecCcccHHHHHhcCCC-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 177 HILCILPNEEAICRLNGLA-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 177 ~v~~~~p~~~~~~~~~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
.+++.++...+.+.+.+.+ +.++.+++..... .+ .......+++++ +.+.+++ +..|+... .
T Consensus 147 ~i~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~-----------~~~~~~~~~~~~-~~~~~~i-~~~G~~~~--~ 209 (364)
T cd03814 147 RVLVPSPSLADELRARGFRRVRLWPRGVDTELF--HP-----------RRRDEALRARLG-PPDRPVL-LYVGRLAP--E 209 (364)
T ss_pred EEEeCCHHHHHHHhccCCCceeecCCCcccccc--Cc-----------ccccHHHHHHhC-CCCCeEE-EEEecccc--c
Confidence 9999999988866655543 5566666533321 11 112233445555 3444444 44554432 2
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh-----hHH
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS-----GTV 330 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~ 330 (394)
+....++++++.+.++ +++++++++.+. . .+.++ ....++.+......+++.++|+.||++|..| |.+
T Consensus 210 k~~~~~i~~~~~l~~~-~~~~l~i~G~~~-~-~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~ 282 (364)
T cd03814 210 KNLEALLDADLPLRRR-PPVRLVIVGDGP-A-RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLV 282 (364)
T ss_pred cCHHHHHHHHHHhhhc-CCceEEEEeCCc-h-HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcH
Confidence 3467788999998776 789988887643 2 22232 2233576664211468999999999999988 345
Q ss_pred HHHHHHcCCCEEEEEcCChHHHHH
Q 016179 331 AVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 331 tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.+|++++|+|+|. ++.+.....+
T Consensus 283 ~lEa~a~g~PvI~-~~~~~~~~~i 305 (364)
T cd03814 283 VLEAMASGLPVVA-PDAGGPADIV 305 (364)
T ss_pred HHHHHHcCCCEEE-cCCCCchhhh
Confidence 5699999999875 5555554444
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.1e-12 Score=121.15 Aligned_cols=272 Identities=14% Similarity=0.141 Sum_probs=156.0
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChh----hHhccCccccccCcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSM----MSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~----m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
|||+|--+-+ -|++ -..++++|.+++.+ +.+..-.... ++.-|++. ..+.-.| ......+........
T Consensus 1 MkIwiDi~~p-~hvhfFk~~I~eL~~~Ghe-V~it~R~~~~~~~LL~~yg~~y----~~iG~~g-~~~~~Kl~~~~~R~~ 73 (335)
T PF04007_consen 1 MKIWIDITHP-AHVHFFKNIIRELEKRGHE-VLITARDKDETEELLDLYGIDY----IVIGKHG-DSLYGKLLESIERQY 73 (335)
T ss_pred CeEEEECCCc-hHHHHHHHHHHHHHhCCCE-EEEEEeccchHHHHHHHcCCCe----EEEcCCC-CCHHHHHHHHHHHHH
Confidence 6787766554 4777 67899999998764 6555432111 23333321 1111112 122233333445567
Q ss_pred HHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHH-HHhhhheeecCccc
Q 016179 107 ETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNL-AAFVDHILCILPNE 185 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l-~~~~d~v~~~~p~~ 185 (394)
++.+++++++||++++.+++ .+.-++.+. |+|.+..+..+ ++. -.+++ ..++|.+++..-..
T Consensus 74 ~l~~~~~~~~pDv~is~~s~--~a~~va~~l--------giP~I~f~D~e--~a~-----~~~~Lt~Pla~~i~~P~~~~ 136 (335)
T PF04007_consen 74 KLLKLIKKFKPDVAISFGSP--EAARVAFGL--------GIPSIVFNDTE--HAI-----AQNRLTLPLADVIITPEAIP 136 (335)
T ss_pred HHHHHHHhhCCCEEEecCcH--HHHHHHHHh--------CCCeEEEecCc--hhh-----ccceeehhcCCeeECCcccC
Confidence 78889999999999986543 333223332 78964433222 222 12333 66899999777666
Q ss_pred HHHHHhcCCC--eE-EEcCCCchhh---hhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhhH
Q 016179 186 EAICRLNGLA--AT-FVGHPVVEDC---LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARML 258 (394)
Q Consensus 186 ~~~~~~~g~~--~~-~vG~Pv~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~l 258 (394)
...+.+.|.+ +. |-|. ++. ..|. ..+++.+++|+++ .+.|++=+-+-.|. .+...
T Consensus 137 ~~~~~~~G~~~~i~~y~G~---~E~ayl~~F~--------------Pd~~vl~~lg~~~-~~yIvvR~~~~~A~y~~~~~ 198 (335)
T PF04007_consen 137 KEFLKRFGAKNQIRTYNGY---KELAYLHPFK--------------PDPEVLKELGLDD-EPYIVVRPEAWKASYDNGKK 198 (335)
T ss_pred HHHHHhcCCcCCEEEECCe---eeEEeecCCC--------------CChhHHHHcCCCC-CCEEEEEeccccCeeecCcc
Confidence 6677777766 54 5553 221 1222 2356888999875 57777766565541 11112
Q ss_pred HHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcC
Q 016179 259 PIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLAR 338 (394)
Q Consensus 259 ~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G 338 (394)
+.+-+.++.|.+. .+. +|+..- ..... +..++++ +.+.+. .-+..+++..||++|+-+||++.||+++|
T Consensus 199 ~i~~~ii~~L~~~-~~~-vV~ipr-~~~~~----~~~~~~~--~~i~~~--~vd~~~Ll~~a~l~Ig~ggTMa~EAA~LG 267 (335)
T PF04007_consen 199 SILPEIIEELEKY-GRN-VVIIPR-YEDQR----ELFEKYG--VIIPPE--PVDGLDLLYYADLVIGGGGTMAREAALLG 267 (335)
T ss_pred chHHHHHHHHHhh-Cce-EEEecC-Ccchh----hHHhccC--ccccCC--CCCHHHHHHhcCEEEeCCcHHHHHHHHhC
Confidence 3344556666543 222 333322 12111 2223332 333322 12566899999999999999999999999
Q ss_pred CCEEEEEcCC--hHHHHHHH
Q 016179 339 LPCVVAYRAH--FLTEWFIR 356 (394)
Q Consensus 339 ~P~Iv~y~~~--~~~~~~a~ 356 (394)
+|+|-+|+.. .++.++.+
T Consensus 268 tPaIs~~~g~~~~vd~~L~~ 287 (335)
T PF04007_consen 268 TPAISCFPGKLLAVDKYLIE 287 (335)
T ss_pred CCEEEecCCcchhHHHHHHH
Confidence 9999888753 45555543
|
They are found in archaea and some bacteria and have no known function. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-11 Score=116.74 Aligned_cols=258 Identities=13% Similarity=0.067 Sum_probs=144.2
Q ss_pred hHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHhcCCCEE
Q 016179 42 SGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV 120 (394)
Q Consensus 42 sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~~~PD~V 120 (394)
||... +..++++|.+.+.+ +.++......-.............+...+.. ..........++.+++++.+||+|
T Consensus 13 gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~i 87 (348)
T cd03820 13 GGAERVLSNLANALAEKGHE-VTIISLDKGEPPFYELDPKIKVIDLGDKRDS----KLLARFKKLRRLRKLLKNNKPDVV 87 (348)
T ss_pred CChHHHHHHHHHHHHhCCCe-EEEEecCCCCCCccccCCccceeeccccccc----chhccccchHHHHHhhcccCCCEE
Confidence 55544 77899999876664 7776654332000000000011111111100 111122334567778888999999
Q ss_pred EEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcc-hH--HHHHHHhhhheeecCcccHHHH-HhcCCCe
Q 016179 121 VTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGE-AR--LKNLAAFVDHILCILPNEEAIC-RLNGLAA 196 (394)
Q Consensus 121 i~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~-~r--~~~l~~~~d~v~~~~p~~~~~~-~~~g~~~ 196 (394)
++.+.. ...+.+.+... .+|++.+. ....+...... .. .+...+.+|.+++.++..+..+ ...+.++
T Consensus 88 ~~~~~~--~~~~~~~~~~~------~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~ 158 (348)
T cd03820 88 ISFLTS--LLTFLASLGLK------IVKLIVSE-HNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRALYYKKFNKNV 158 (348)
T ss_pred EEcCch--HHHHHHHHhhc------cccEEEec-CCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHHHhhccCCCCe
Confidence 987533 22222232211 23654332 11111111000 01 2335778999999998885322 2233457
Q ss_pred EEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeE
Q 016179 197 TFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELI 276 (394)
Q Consensus 197 ~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~ 276 (394)
.+++||+...... .. .+.+.++++.+|+ .. . .+....++++++.+.+..++++
T Consensus 159 ~vi~~~~~~~~~~----------------~~--------~~~~~~~i~~~g~-~~-~-~K~~~~l~~~~~~l~~~~~~~~ 211 (348)
T cd03820 159 VVIPNPLPFPPEE----------------PS--------SDLKSKRILAVGR-LV-P-QKGFDLLIEAWAKIAKKHPDWK 211 (348)
T ss_pred EEecCCcChhhcc----------------cc--------CCCCCcEEEEEEe-ec-c-ccCHHHHHHHHHHHHhcCCCeE
Confidence 8888887554321 00 1244566666643 22 2 3346778899999887778999
Q ss_pred EEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEE
Q 016179 277 TVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVA 344 (394)
Q Consensus 277 ~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~ 344 (394)
+++++.+. . .+.+++...+.+. ++.+. ++ .+++.++|+.||++|..| |.+.+|++++|+|+|+.
T Consensus 212 l~i~G~~~-~-~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~ 282 (348)
T cd03820 212 LRIVGDGP-E-REALEALIKELGLEDRVILL-GF-TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISF 282 (348)
T ss_pred EEEEeCCC-C-HHHHHHHHHHcCCCCeEEEc-CC-cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEe
Confidence 88887653 2 3334444444433 35444 43 478999999999999998 66777999999998864
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.45 E-value=6e-11 Score=117.90 Aligned_cols=206 Identities=10% Similarity=0.037 Sum_probs=117.0
Q ss_pred HHhcCCCEEEEeCCCCchHHHHHH-HHHhccccCCCCCeEEEeecCccccc-------cCc-c----hHHH-HHHHhhhh
Q 016179 112 ALLFRPHAVVTVDSKGFSFRLLKQ-LRARYSHERLNGPAHFHYVAPSFWAW-------KGG-E----ARLK-NLAAFVDH 177 (394)
Q Consensus 112 i~~~~PD~Vi~~~~~~f~~~la~~-l~~~~~~~~~~ip~~~~yv~~~~wa~-------~~g-~----~r~~-~l~~~~d~ 177 (394)
++.++||+|+++..+.+...+++. +++.. +.|+++.+ |..|.. ... . .+.+ .+.+.+|.
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~-----~~p~v~~~--h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 168 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLR-----RAKFVIDW--HNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADG 168 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHh-----CCCEEEEc--CCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCE
Confidence 356899999876433333333333 22221 56864432 333311 000 0 0111 24778999
Q ss_pred eeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHh
Q 016179 178 ILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 256 (394)
Q Consensus 178 v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~ 256 (394)
+++.++..++.+.+ .|+++.++=|...+.+. + .... . .+.++.+.+++..|.-+ +. +
T Consensus 169 ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~---~------------~~~~---~--~~~~~~~~~i~~~grl~-~~-k 226 (371)
T PLN02275 169 HLCVTKAMQHELDQNWGIRATVLYDQPPEFFR---P------------ASLE---I--RLRPNRPALVVSSTSWT-PD-E 226 (371)
T ss_pred EEECCHHHHHHHHHhcCCCeEEECCCCHHHcC---c------------CCch---h--cccCCCcEEEEEeCcee-cc-C
Confidence 99999999888765 47775555444323221 1 1111 1 12223344444444433 22 2
Q ss_pred hHHHHHHHHHHhh-----------------hhCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEEecCCC-cchHHHHH
Q 016179 257 MLPIFAKTVELLK-----------------DSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGS-SNLKYDAF 317 (394)
Q Consensus 257 ~l~~ll~a~~~l~-----------------~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~~~g~~-~~~~~~~~ 317 (394)
.++.+++++..+. +..|++++++++++. . ++.+++..++.+. ++.++.++. .++++++|
T Consensus 227 ~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-~-~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l 304 (371)
T PLN02275 227 DFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-Q-KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLL 304 (371)
T ss_pred CHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-C-HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHH
Confidence 3566778877663 235789999988764 3 3456666665554 355554432 57899999
Q ss_pred HHcccceeh--h------hHHHHHHHHcCCCEEEEEcCCh
Q 016179 318 SASRVALCT--S------GTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 318 ~~ADl~I~~--S------Gt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
++||+.|.. | |...+|+|+||+|+|. ...+.
T Consensus 305 ~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa-~~~gg 343 (371)
T PLN02275 305 GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCA-VSYSC 343 (371)
T ss_pred HhCCEEEEeccccccccccHHHHHHHHCCCCEEE-ecCCC
Confidence 999999853 1 3455699999999886 44444
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-11 Score=118.98 Aligned_cols=252 Identities=14% Similarity=0.031 Sum_probs=143.8
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcc---------hHHHHHHHhhh
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGE---------ARLKNLAAFVD 176 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~---------~r~~~l~~~~d 176 (394)
.+..+++++++||+|++.+. +....+..+.++. ++|+++++.....+.+.... ...+.+.+.+|
T Consensus 72 ~~~~~~~~~~~~dvvh~~~~--~~~~~~~~~~~~~-----~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 144 (367)
T cd05844 72 PQLRRLLRRHRPDLVHAHFG--FDGVYALPLARRL-----GVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAA 144 (367)
T ss_pred cHHHHHHHhhCCCEEEeccC--chHHHHHHHHHHc-----CCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcC
Confidence 34555788999999998642 2333333332221 78976544321111111100 01123467899
Q ss_pred heeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH
Q 016179 177 HILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE 253 (394)
Q Consensus 177 ~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e 253 (394)
.+++.++..++.+.+.|++ +.++.|++..+.. .+ . .-+.+.++++.+ |+...
T Consensus 145 ~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~--~~------------~---------~~~~~~~~i~~~-G~~~~- 199 (367)
T cd05844 145 LFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKF--TP------------A---------TPARRPPRILFV-GRFVE- 199 (367)
T ss_pred EEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhc--CC------------C---------CCCCCCcEEEEE-Eeecc-
Confidence 9999999999988877764 5566665533211 10 0 011234455554 55442
Q ss_pred HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh----
Q 016179 254 VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS---- 327 (394)
Q Consensus 254 i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S---- 327 (394)
.+....+++++..+.++.+++++++++.+. ..+.++...++.+ .++.+......+++.++|+.||++|..|
T Consensus 200 -~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~ 276 (367)
T cd05844 200 -KKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAP 276 (367)
T ss_pred -ccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCC
Confidence 344677889999988777889988887642 2344555555533 3466553211367999999999999876
Q ss_pred -------hHHHHHHHHcCCCEEEEEcCChHHHHHHH----hhccC-Cccc----hhhhhcCCCCc-------ccccCCCC
Q 016179 328 -------GTVAVELQLARLPCVVAYRAHFLTEWFIR----YKAKI-PYIS----LPNILLDSPII-------PEALLQAC 384 (394)
Q Consensus 328 -------Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a~----~~vk~-~~~~----l~Nil~~~~i~-------pEliq~~~ 384 (394)
|...+||+++|+|+|. .+.+.....+.. .++.. ..-. +-+++.+++.. .+.+++.+
T Consensus 277 ~~~~E~~~~~~~EA~a~G~PvI~-s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~ 355 (367)
T cd05844 277 SGDAEGLPVVLLEAQASGVPVVA-TRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERF 355 (367)
T ss_pred CCCccCCchHHHHHHHcCCCEEE-eCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHC
Confidence 4555699999999886 455544444321 12211 1111 22344443322 33455677
Q ss_pred CHHHHHHHh
Q 016179 385 TPDTLTHLL 393 (394)
Q Consensus 385 ~~~~i~~~~ 393 (394)
++++.++.+
T Consensus 356 s~~~~~~~l 364 (367)
T cd05844 356 DLRRQTAKL 364 (367)
T ss_pred CHHHHHHHH
Confidence 888877765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.9e-11 Score=122.12 Aligned_cols=120 Identities=17% Similarity=0.204 Sum_probs=84.4
Q ss_pred hHHHHhhcCCCC-CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEe
Q 016179 227 SEDFKNKYSVPS-GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILV 305 (394)
Q Consensus 227 ~~~~r~~lgl~~-~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~ 305 (394)
+.++++++|+++ +.++|+.+ +|-.+-| .+..++++++.+.+. ++++++++++...+++.++++.++++.++.++
T Consensus 268 k~~l~~~~gl~~~~~~~i~~v--GRl~~~K-G~~~li~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 342 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMV--SRLTEQK-GLDLVLEALPELLEQ--GGQLVLLGTGDPELEEAFRALAARYPGKVGVQ 342 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEe--ecccccc-ChHHHHHHHHHHHhc--CCEEEEEecCcHHHHHHHHHHHHHCCCcEEEE
Confidence 456788999985 56777666 3444333 467888999988653 78999888764334455666666665566655
Q ss_pred cCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHH
Q 016179 306 PGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 306 ~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~ 352 (394)
.++..+..+.+|++||++|..| |.+.+||+++|+|+|+ ..++.+..
T Consensus 343 ~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~-~~~gG~~e 393 (466)
T PRK00654 343 IGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIV-RRTGGLAD 393 (466)
T ss_pred EeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEE-eCCCCccc
Confidence 5652233678999999999998 7777899999999886 55554443
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-11 Score=120.89 Aligned_cols=205 Identities=14% Similarity=0.157 Sum_probs=126.5
Q ss_pred hcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHhcC
Q 016179 114 LFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNG 193 (394)
Q Consensus 114 ~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~~g 193 (394)
..++|+|++.+.+ .+...++++. ++.|++++. |..| .+ .+.+.++++++.+++.++.+.+..
T Consensus 97 ~~~~~vi~v~~~~----~~~~~~~~~~----~~~~~v~~~--h~~~--~~------~~~~~~~~ii~~S~~~~~~~~~~~ 158 (380)
T PRK15484 97 ITKDSVIVIHNSM----KLYRQIRERA----PQAKLVMHM--HNAF--EP------ELLDKNAKIIVPSQFLKKFYEERL 158 (380)
T ss_pred CCCCcEEEEeCcH----HhHHHHHhhC----CCCCEEEEE--eccc--Ch------hHhccCCEEEEcCHHHHHHHHhhC
Confidence 3568877765432 2333333332 256765543 2222 21 122347899999999998887643
Q ss_pred --CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh
Q 016179 194 --LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271 (394)
Q Consensus 194 --~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~ 271 (394)
.++.++.|++..... . +..+...+++++++++.++|+.. |... ..+ .+..++++++.+.++
T Consensus 159 ~~~~i~vIpngvd~~~~--~------------~~~~~~~~~~~~~~~~~~~il~~-Grl~-~~K-g~~~Li~A~~~l~~~ 221 (380)
T PRK15484 159 PNADISIVPNGFCLETY--Q------------SNPQPNLRQQLNISPDETVLLYA-GRIS-PDK-GILLLMQAFEKLATA 221 (380)
T ss_pred CCCCEEEecCCCCHHHc--C------------CcchHHHHHHhCCCCCCeEEEEe-ccCc-ccc-CHHHHHHHHHHHHHh
Confidence 246677777643321 1 12234567788988777666554 4433 333 467788999999888
Q ss_pred CCCeEEEEEeCCCc-------ChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh------hHHHHHHHHcC
Q 016179 272 FPELITVIHVAPNR-------HVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS------GTVAVELQLAR 338 (394)
Q Consensus 272 ~~~~~~vi~~g~~~-------~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S------Gt~tlEa~a~G 338 (394)
.|++++++++++.. .+.+.+++...+.+.++.++.....+++.++|++||++|..| |.+.+|||++|
T Consensus 222 ~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G 301 (380)
T PRK15484 222 HSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG 301 (380)
T ss_pred CCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC
Confidence 89999999886532 122234444444455676653221468999999999999988 34556999999
Q ss_pred CCEEEEEcCChHHHHH
Q 016179 339 LPCVVAYRAHFLTEWF 354 (394)
Q Consensus 339 ~P~Iv~y~~~~~~~~~ 354 (394)
+|+|. .+.+.....+
T Consensus 302 ~PVI~-s~~gg~~Eiv 316 (380)
T PRK15484 302 KPVLA-STKGGITEFV 316 (380)
T ss_pred CCEEE-eCCCCcHhhc
Confidence 99886 4555555444
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=127.64 Aligned_cols=222 Identities=14% Similarity=0.076 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC-c--cccccCcchHHHH-HHHhhh
Q 016179 101 FRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP-S--FWAWKGGEARLKN-LAAFVD 176 (394)
Q Consensus 101 ~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~-~--~wa~~~g~~r~~~-l~~~~d 176 (394)
+-..+..+-+.+.+++||+|++.| +-.-.+|..+...+. +|| +.|.... . .+....-+...+. +.+.+|
T Consensus 52 ~~~~~~~~~~~~~~~~Pd~Vlv~G--D~~~~la~alaA~~~----~ip-v~HieaGlRs~d~~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 52 TGLAIIELADVLEREKPDAVLVLG--DRNEALAAALAAFYL----NIP-VAHIEAGLRSGDRTEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEEET--TSHHHHHHHHHHHHT----T-E-EEEES-----S-TTSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEc--CCchHHHHHHHHHHh----CCC-EEEecCCCCccccCCCCchhhhhhhhhhhhh
Confidence 334556677888899999999886 333333333333322 799 5785332 0 1110000123333 588999
Q ss_pred heeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHH-HhhcCCCCCCcEEEEECCCcHH
Q 016179 177 HILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDF-KNKYSVPSGATVISLLPGSRLQ 252 (394)
Q Consensus 177 ~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~lgl~~~~~~IlllgGSrg~ 252 (394)
..|+..+..++.+.+.|++ +.+||+|..|.+....+ ...+.. ...+.-+..++.++++- .|..
T Consensus 125 lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~------------~~~~~~~~~~i~~~~~~~~iLvt~-H~~t 191 (346)
T PF02350_consen 125 LHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKE------------EIEEKYKNSGILQDAPKPYILVTL-HPVT 191 (346)
T ss_dssp EEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHH------------TTCC-HHHHHHHHCTTSEEEEEE--S-CC
T ss_pred hhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHH------------HHhhhhhhHHHHhccCCCEEEEEe-Ccch
Confidence 9999999999999999984 88999999998753211 111111 11110024556666653 3332
Q ss_pred -HH-HhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHH
Q 016179 253 -EV-ARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330 (394)
Q Consensus 253 -ei-~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~ 330 (394)
.- ...+..+.++++.|.+. ++++++++..+++.....+.+.+.++ .+++++......+...+|+.||++|+-||+.
T Consensus 192 ~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgdSsGI 269 (346)
T PF02350_consen 192 NEDNPERLEQILEALKALAER-QNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGDSSGI 269 (346)
T ss_dssp CCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEESSHHH
T ss_pred hcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEcCccH
Confidence 11 12244677777888776 78999999986655555565555555 3777775333568899999999999999966
Q ss_pred HHHHHHcCCCEEEE
Q 016179 331 AVELQLARLPCVVA 344 (394)
Q Consensus 331 tlEa~a~G~P~Iv~ 344 (394)
..||+.+|+|+|.+
T Consensus 270 ~eEa~~lg~P~v~i 283 (346)
T PF02350_consen 270 QEEAPSLGKPVVNI 283 (346)
T ss_dssp HHHGGGGT--EEEC
T ss_pred HHHHHHhCCeEEEe
Confidence 66999999999987
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.6e-11 Score=119.55 Aligned_cols=165 Identities=16% Similarity=0.183 Sum_probs=110.1
Q ss_pred HHHhhhheeecCcccHHHHH-hcCC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 171 LAAFVDHILCILPNEEAICR-LNGL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~-~~g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
+.+.+|.+++.++...+.+. .+|. ++.++.|++..... . +.++...+++++++++.++|+.+
T Consensus 160 ~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~--~------------~~~~~~~~~~~~~~~~~~~i~~~ 225 (405)
T TIGR03449 160 LVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERF--R------------PGDRATERARLGLPLDTKVVAFV 225 (405)
T ss_pred HHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHc--C------------CCcHHHHHHhcCCCCCCcEEEEe
Confidence 56789999999998777654 3454 35677777754322 1 12345677889998877777665
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhhhhCCC--eEEEEEeCCCc---ChHHHHHHHhhcCCC--CEEEecCCC-cchHHHHHH
Q 016179 247 PGSRLQEVARMLPIFAKTVELLKDSFPE--LITVIHVAPNR---HVENYITGLIQKWPV--PSILVPGGS-SNLKYDAFS 318 (394)
Q Consensus 247 gGSrg~ei~~~l~~ll~a~~~l~~~~~~--~~~vi~~g~~~---~~~~~l~~~~~~~~~--~v~~~~g~~-~~~~~~~~~ 318 (394)
|.-. .. +.+..++++++.+.++.|+ +++++++++.. ...+.+++..++.+. ++.+. |+. .+++.++|+
T Consensus 226 -G~l~-~~-K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~-g~~~~~~~~~~l~ 301 (405)
T TIGR03449 226 -GRIQ-PL-KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFL-PPRPPEELVHVYR 301 (405)
T ss_pred -cCCC-cc-cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEEC-CCCCHHHHHHHHH
Confidence 3332 22 3467788999988776666 88888886321 123345555554443 46655 432 468899999
Q ss_pred Hcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 319 ASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 319 ~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.||+++..| |.+.+||+++|+|+|. .+.+.....+
T Consensus 302 ~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~-~~~~~~~e~i 341 (405)
T TIGR03449 302 AADVVAVPSYNESFGLVAMEAQACGTPVVA-ARVGGLPVAV 341 (405)
T ss_pred hCCEEEECCCCCCcChHHHHHHHcCCCEEE-ecCCCcHhhh
Confidence 999999877 6677799999999886 5555544443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-10 Score=110.60 Aligned_cols=285 Identities=13% Similarity=0.061 Sum_probs=155.8
Q ss_pred hHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCcccc----ccCcceeccHHHhhhhHHHHHHHHHHHHHHHH--h
Q 016179 42 SGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLF----PMEDIAVMGIWELLPHIYKFRVRLKETIEAAL--L 114 (394)
Q Consensus 42 sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~----~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~--~ 114 (394)
+|+-. ...+++.|.+.+.+ +.++................ ...... ...................+.+.++ .
T Consensus 14 ~g~~~~~~~~~~~l~~~g~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (377)
T cd03798 14 GGGGIFVKELARALAKRGVE-VTVLAPGPWGPKLLDLLKGRLVGVERLPVL-LPVVPLLKGPLLYLLAARALLKLLKLKR 91 (377)
T ss_pred chHHHHHHHHHHHHHHCCCc-eEEEecCCCCCCchhhcccccccccccccC-cchhhccccchhHHHHHHHHHHHHhccc
Confidence 44444 78899999977664 76665542211110000000 000000 0000111111223334455677777 8
Q ss_pred cCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc---chHHHHHHHhhhheeecCcccHHHHHh
Q 016179 115 FRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG---EARLKNLAAFVDHILCILPNEEAICRL 191 (394)
Q Consensus 115 ~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g---~~r~~~l~~~~d~v~~~~p~~~~~~~~ 191 (394)
.+||+|++.. +.....++..+.+.. ++|++++......+..... ....+.+.+.+|.+++.++..++.+.+
T Consensus 92 ~~~dii~~~~-~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 165 (377)
T cd03798 92 FRPDLIHAHF-AYPDGFAAALLKRKL-----GIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA 165 (377)
T ss_pred CCCCEEEEec-cchHHHHHHHHHHhc-----CCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCHHHHHHHHH
Confidence 8999998863 222223333333221 5786554422221111110 011233577899999999999998876
Q ss_pred c---CCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHh
Q 016179 192 N---GLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELL 268 (394)
Q Consensus 192 ~---g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l 268 (394)
. +.++.++++++...... + ...... .+++.+.+.++++.+| +... .+.+..++++++.+
T Consensus 166 ~~~~~~~~~~i~~~~~~~~~~--~------------~~~~~~-~~~~~~~~~~~i~~~g-~~~~--~k~~~~li~~~~~~ 227 (377)
T cd03798 166 LGIDPEKVTVIPNGVDTERFS--P------------ADRAEA-RKLGLPEDKKVILFVG-RLVP--RKGIDYLIEALARL 227 (377)
T ss_pred hcCCCCceEEcCCCcCcccCC--C------------cchHHH-HhccCCCCceEEEEec-cCcc--ccCHHHHHHHHHHH
Confidence 4 34577888877544321 0 111111 3345555666666654 3332 33456788899888
Q ss_pred hhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCE
Q 016179 269 KDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPC 341 (394)
Q Consensus 269 ~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~ 341 (394)
.++.+++++++.+.+. . .+.+++..++.+ .++.+......+++.++|+.||++|..| |+..+|++++|+|+
T Consensus 228 ~~~~~~~~l~i~g~~~-~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pv 305 (377)
T cd03798 228 LKKRPDVHLVIVGDGP-L-REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPV 305 (377)
T ss_pred HhcCCCeEEEEEcCCc-c-hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCE
Confidence 7767789988776543 2 233444444332 2466553221357899999999999877 45666999999998
Q ss_pred EEEEcCChHHHHHH
Q 016179 342 VVAYRAHFLTEWFI 355 (394)
Q Consensus 342 Iv~y~~~~~~~~~a 355 (394)
|+ .+.+.....+.
T Consensus 306 I~-~~~~~~~~~~~ 318 (377)
T cd03798 306 VA-TDVGGIPEIIT 318 (377)
T ss_pred EE-ecCCChHHHhc
Confidence 75 56666555553
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-10 Score=119.83 Aligned_cols=119 Identities=15% Similarity=0.149 Sum_probs=82.7
Q ss_pred hHHHHhhcCCC--CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVP--SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~--~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|++ ++.++|+.+| |-.+.| .+..++++++.+.+. ++++++++.+...+++.+++...+...++.+
T Consensus 281 k~~l~~~~g~~~~~~~~~i~~vG--rl~~~K-g~~~li~a~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~ 355 (476)
T cd03791 281 KAALQEELGLPVDPDAPLFGFVG--RLTEQK-GIDLLLEALPELLEL--GGQLVILGSGDPEYEEALRELAARYPGRVAV 355 (476)
T ss_pred HHHHHHHcCCCcCCCCCEEEEEe--eccccc-cHHHHHHHHHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhCCCcEEE
Confidence 45678899985 6777777763 443334 467888999888753 4899888876444445555554444346766
Q ss_pred ecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHH
Q 016179 305 VPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
+.++..+.+..++++||+++..| |.+.+||+++|+|+|+ .+.+.+.
T Consensus 356 ~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-~~~gg~~ 406 (476)
T cd03791 356 LIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIV-RATGGLA 406 (476)
T ss_pred EEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEE-CcCCCcc
Confidence 66654345678999999999987 6677799999999885 4555443
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.3e-10 Score=121.37 Aligned_cols=299 Identities=11% Similarity=0.040 Sum_probs=163.2
Q ss_pred ccccCCCceEEEEeCC--chH-HHHHHHHHHHHHhcCC--C---------CeEEEEe-----cCh-----hhHhccCccc
Q 016179 25 GAIKDGELRVFIVAGE--VSG-DSIGSRLMSAMKKLAP--L---------PVSFSGV-----GGS-----MMSEQGMKSL 80 (394)
Q Consensus 25 ~~~~~~~~kIlI~aG~--~sG-h~~a~~l~~~L~~~~~--~---------~~~~~g~-----gg~-----~m~~~g~~~~ 80 (394)
.+|...--||+++.++ .|| ..+...++..+.+... . +++++.. .|. .+++.|++..
T Consensus 275 ~~~~~~~~rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~ 354 (694)
T PRK15179 275 AGPESFVGPVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVS 354 (694)
T ss_pred CCCCCCcceEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEE
Confidence 3444333377665444 455 6678899999988631 0 1344432 222 4667887643
Q ss_pred -cccCcce----eccHHHhhh----hHH-HHHHHHHHHHHHHHhcCCCEEEEeCCCC-chHHHHHHHHHhccccCCCCCe
Q 016179 81 -FPMEDIA----VMGIWELLP----HIY-KFRVRLKETIEAALLFRPHAVVTVDSKG-FSFRLLKQLRARYSHERLNGPA 149 (394)
Q Consensus 81 -~~~~~l~----~~G~~~~l~----~~~-~~~~~~~~~~~~i~~~~PD~Vi~~~~~~-f~~~la~~l~~~~~~~~~~ip~ 149 (394)
+....-. ..+....++ .++ .....+.++.+++++++||+|++.++.. +-..++++ . .++|+
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~---~-----~gvPv 426 (694)
T PRK15179 355 VYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAAL---L-----AGVPR 426 (694)
T ss_pred EeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH---H-----cCCCE
Confidence 2221100 001111111 111 2455677889999999999999875421 11223322 2 16786
Q ss_pred EEEeecCccccccCcchHHH----HH---HHhhh--heeecCcccHHHHH-hcCCC---eEEEcCCCchhhhhhcCCCCC
Q 016179 150 HFHYVAPSFWAWKGGEARLK----NL---AAFVD--HILCILPNEEAICR-LNGLA---ATFVGHPVVEDCLELNLGKGP 216 (394)
Q Consensus 150 ~~~yv~~~~wa~~~g~~r~~----~l---~~~~d--~v~~~~p~~~~~~~-~~g~~---~~~vG~Pv~~~~~~~~~~~~~ 216 (394)
+++. .+..+.+.. ..+.. .+ ...++ .+++.+...++.+. ..|++ +.++.|++.... +.+
T Consensus 427 Iv~t-~h~~~~~~~-~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~--f~~---- 498 (694)
T PRK15179 427 IVLS-VRTMPPVDR-PDRYRVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLK--SVQ---- 498 (694)
T ss_pred EEEE-eCCCccccc-hhHHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHh--cCC----
Confidence 4322 222211100 00111 11 11233 33344455555554 35664 667777764322 111
Q ss_pred CCcccccCCChHHHHh--hcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHH
Q 016179 217 EPCELKMEGNSEDFKN--KYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGL 294 (394)
Q Consensus 217 ~~~~~~~~~~~~~~r~--~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~ 294 (394)
.+.++ ..+. +...+++.++|+.+ +|-.+.|. ...+++++..+.++.|++++++++++. .++.++++
T Consensus 499 ------~~~~~-~~~~~~~~~~~~~~~vIg~V--GRL~~~KG-~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l 566 (694)
T PRK15179 499 ------DDACT-AMMAQFDARTSDARFTVGTV--MRVDDNKR-PFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREF 566 (694)
T ss_pred ------Cchhh-HHHHhhccccCCCCeEEEEE--EeCCccCC-HHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHH
Confidence 00111 1111 22334455667666 35444443 677899999888778899999998763 23456666
Q ss_pred hhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 295 IQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 295 ~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.++.++ ++.+. |+ .+++..+|++||++|..| |.+.+|||++|+|+|. ++.+.....+
T Consensus 567 ~~~lgL~~~V~fl-G~-~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVa-t~~gG~~EiV 630 (694)
T PRK15179 567 AQRLGMGERILFT-GL-SRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVT-TLAGGAGEAV 630 (694)
T ss_pred HHHcCCCCcEEEc-CC-cchHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEE-ECCCChHHHc
Confidence 665543 46554 55 589999999999999987 5566799999999886 5656555554
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-10 Score=111.71 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=124.9
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcc--ccccCc--chHH------HHHHHhhhheee
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSF--WAWKGG--EARL------KNLAAFVDHILC 180 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~--wa~~~g--~~r~------~~l~~~~d~v~~ 180 (394)
.....+||+|++.+...+....+..+.++. ++|++++. .... |.+... .... +.+.+.+|.+++
T Consensus 82 ~~~~~~~dii~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 155 (375)
T cd03821 82 RLNIREADIVHVHGLWSYPSLAAARAARKY-----GIPYVVSP-HGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHA 155 (375)
T ss_pred HHhCCCCCEEEEecccchHHHHHHHHHHHh-----CCCEEEEc-cccccccccccchhhhHHHHHHHHHHHHhcCCEEEE
Confidence 344568999998764333333333333221 67864432 2111 210000 0001 123455777777
Q ss_pred cCcccHHHHHhcC--CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhH
Q 016179 181 ILPNEEAICRLNG--LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARML 258 (394)
Q Consensus 181 ~~p~~~~~~~~~g--~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l 258 (394)
............+ .++.++.|++...... . ......++.++.+++.++++.+|+ . .+.+ ..
T Consensus 156 ~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~i~~~G~-~-~~~K-~~ 218 (375)
T cd03821 156 TSEQEAAEIRRLGLKAPIAVIPNGVDIPPFA--A------------LPSRGRRRKFPILPDKRIILFLGR-L-HPKK-GL 218 (375)
T ss_pred CCHHHHHHHHhhCCcccEEEcCCCcChhccC--c------------chhhhhhhhccCCCCCcEEEEEeC-c-chhc-CH
Confidence 7755555444322 3466776665433211 0 111112566777777888877753 2 2233 46
Q ss_pred HHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCC-cchHHHHHHHcccceehh-----hHH
Q 016179 259 PIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGS-SNLKYDAFSASRVALCTS-----GTV 330 (394)
Q Consensus 259 ~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~ 330 (394)
..+++++..+.++.+++++++++.........++....+.+. ++.+. |+. .+++.++|+.||++|..| |.+
T Consensus 219 ~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~ 297 (375)
T cd03821 219 DLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFT-GMLYGEDKAAALADADLFVLPSHSENFGIV 297 (375)
T ss_pred HHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEc-CCCChHHHHHHHhhCCEEEeccccCCCCcH
Confidence 778899999987778899988876543333333333233332 46555 432 348999999999999988 556
Q ss_pred HHHHHHcCCCEEEEEcCChHHHHH
Q 016179 331 AVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 331 tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.+||+++|+|+|+ .+.+.....+
T Consensus 298 ~~Eama~G~PvI~-~~~~~~~~~~ 320 (375)
T cd03821 298 VAEALACGTPVVT-TDKVPWQELI 320 (375)
T ss_pred HHHHHhcCCCEEE-cCCCCHHHHh
Confidence 6699999999886 5555555444
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.5e-11 Score=114.20 Aligned_cols=280 Identities=15% Similarity=0.066 Sum_probs=148.1
Q ss_pred eEEEEeCC---chH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHH
Q 016179 33 RVFIVAGE---VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKET 108 (394)
Q Consensus 33 kIlI~aG~---~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~ 108 (394)
||+|++.. .|| ..+...++++|.+.+.+ +.++...... ... ... . .. .+....... .......+
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~-~~~--~~~-~--~~--~~~~~~~~~---~~~~~~~~ 68 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPD-VLVVSVAALY-PSL--LYG-G--EQ--EVVRVIVLD---NPLDYRRA 68 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCe-EEEEEeeccc-Ccc--cCC-C--cc--cceeeeecC---CchhHHHH
Confidence 46665444 344 44478899999988764 6665543221 000 000 0 00 000000000 01112335
Q ss_pred HHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecC--cc-ccccCcchHHHHHHHhhhheeecC-c
Q 016179 109 IEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAP--SF-WAWKGGEARLKNLAAFVDHILCIL-P 183 (394)
Q Consensus 109 ~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~--~~-wa~~~g~~r~~~l~~~~d~v~~~~-p 183 (394)
.+.+++.+||+|++.+ ++.+.......+...... .++|++++.... .. +.+.. .....+.+.+|.+++.+ +
T Consensus 69 ~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~--~~~~~~~~~~d~ii~~s~~ 144 (366)
T cd03822 69 ARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRG--LGIPVVVTLHTVLLHEPRPGDR--ALLRLLLRRADAVIVMSSE 144 (366)
T ss_pred HHHHhhcCCCEEEEeeccccccchhhHHHHHHHhh--cCCCEEEEEecCCccccchhhh--HHHHHHHhcCCEEEEeeHH
Confidence 6677889999999875 222221111122111000 167865443222 11 11111 12344678899999995 4
Q ss_pred ccHHHHHhcC-CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHH
Q 016179 184 NEEAICRLNG-LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFA 262 (394)
Q Consensus 184 ~~~~~~~~~g-~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll 262 (394)
..++.+.... .++.++.||+...... .... .++...+.+.++|+.+|.-.. - +.+..++
T Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~~~~-~~~~~~~~~~~~i~~~G~~~~--~-K~~~~ll 204 (366)
T cd03822 145 LLRALLLRAYPEKIAVIPHGVPDPPAE----------------PPES-LKALGGLDGRPVLLTFGLLRP--Y-KGLELLL 204 (366)
T ss_pred HHHHHHhhcCCCcEEEeCCCCcCcccC----------------Cchh-hHhhcCCCCCeEEEEEeeccC--C-CCHHHHH
Confidence 4455554432 4688888888553221 0111 133344556677777643222 2 3456788
Q ss_pred HHHHHhhhhCCCeEEEEEeCCCcChHHHHHH---HhhcCC--CCEEEecCCC-cchHHHHHHHcccceehh-------hH
Q 016179 263 KTVELLKDSFPELITVIHVAPNRHVENYITG---LIQKWP--VPSILVPGGS-SNLKYDAFSASRVALCTS-------GT 329 (394)
Q Consensus 263 ~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~---~~~~~~--~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-------Gt 329 (394)
++++.+.++.+++++++++............ .+.+.+ .++.++.++. .+++.++|+.||+++..| |.
T Consensus 205 ~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~ 284 (366)
T cd03822 205 EALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSG 284 (366)
T ss_pred HHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccch
Confidence 9999988777889988888654332221110 122222 3566665422 468999999999999766 22
Q ss_pred HHHHHHHcCCCEEEEEcCCh
Q 016179 330 VAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~y~~~~ 349 (394)
+.+||+++|+|+|. .+.+.
T Consensus 285 ~~~Ea~a~G~PvI~-~~~~~ 303 (366)
T cd03822 285 VLAYAIGFGKPVIS-TPVGH 303 (366)
T ss_pred HHHHHHHcCCCEEe-cCCCC
Confidence 34499999999886 44443
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-10 Score=113.15 Aligned_cols=163 Identities=15% Similarity=0.090 Sum_probs=99.7
Q ss_pred HHHhhhheeecCcccHHHHHhcCC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEEC
Q 016179 171 LAAFVDHILCILPNEEAICRLNGL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLP 247 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illlg 247 (394)
+.+.+|.+++.++...+.+...+. ++.++.|++....... ......+.++..+++..+++ ..
T Consensus 162 ~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~-~~ 226 (394)
T cd03794 162 IYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKP--------------PPADESLRKELGLDDKFVVL-YA 226 (394)
T ss_pred HHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCC--------------ccchhhhhhccCCCCcEEEE-Ee
Confidence 466789999999999888864443 3677788776543211 11111133444444544444 44
Q ss_pred CCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC-CCEEEecCCCcchHHHHHHHcccceeh
Q 016179 248 GSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP-VPSILVPGGSSNLKYDAFSASRVALCT 326 (394)
Q Consensus 248 GSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~ADl~I~~ 326 (394)
|+... .+.+..+++++..+.+. +++++++++.+ ... +.+.+.....+ .++.++.....+++.++|+.||++|..
T Consensus 227 G~~~~--~k~~~~l~~~~~~l~~~-~~~~l~i~G~~-~~~-~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~ 301 (394)
T cd03794 227 GNIGR--AQGLDTLLEAAALLKDR-PDIRFLIVGDG-PEK-EELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVP 301 (394)
T ss_pred cCccc--ccCHHHHHHHHHHHhhc-CCeEEEEeCCc-ccH-HHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEe
Confidence 55442 33466788899888765 78998877654 322 33443222222 256666422146899999999999987
Q ss_pred hhH---------H-HHHHHHcCCCEEEEEcCChHHHHH
Q 016179 327 SGT---------V-AVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 327 SGt---------~-tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.. . .+||+++|+|+|. .+.+.....+
T Consensus 302 ~~~~~~~~~~~p~~~~Ea~~~G~pvi~-~~~~~~~~~~ 338 (394)
T cd03794 302 LKPGPAFEGVSPSKLFEYMAAGKPVLA-SVDGESAELV 338 (394)
T ss_pred ccCcccccccCchHHHHHHHCCCcEEE-ecCCCchhhh
Confidence 632 1 3599999999886 4544444443
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.8e-10 Score=117.03 Aligned_cols=172 Identities=15% Similarity=0.085 Sum_probs=103.7
Q ss_pred HHHHhhhheeecCcccHHHHHhc--C-----------CCeEEEcCCCchhhhhhcCCCCCC-Ccc-----c-ccCCChHH
Q 016179 170 NLAAFVDHILCILPNEEAICRLN--G-----------LAATFVGHPVVEDCLELNLGKGPE-PCE-----L-KMEGNSED 229 (394)
Q Consensus 170 ~l~~~~d~v~~~~p~~~~~~~~~--g-----------~~~~~vG~Pv~~~~~~~~~~~~~~-~~~-----~-~~~~~~~~ 229 (394)
...+.+|.+++.+|..++.+... | -++.++-|-+.... +.+..+.. ..+ + .....+..
T Consensus 205 ~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~--f~p~~~~~~~~~~~~~~~~~k~~~k~~ 282 (485)
T PRK14099 205 AGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAV--WNPATDELIAATYDVETLAARAANKAA 282 (485)
T ss_pred HHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhh--ccccccchhhhcCChhHHHhHHHhHHH
Confidence 34678999999999987776431 1 12333333332221 11100000 000 0 00012456
Q ss_pred HHhhcCCCC--CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecC
Q 016179 230 FKNKYSVPS--GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPG 307 (394)
Q Consensus 230 ~r~~lgl~~--~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g 307 (394)
+++++|++. +.++++.+ ||-.+.| .+..++++++.+.+ .++++++++++...+++.++++..+++.++.++.|
T Consensus 283 l~~~~gl~~~~~~~li~~V--gRL~~~K-G~d~Li~A~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G 357 (485)
T PRK14099 283 LQARFGLDPDPDALLLGVI--SRLSWQK-GLDLLLEALPTLLG--EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIG 357 (485)
T ss_pred HHHHcCCCcccCCcEEEEE--ecCCccc-cHHHHHHHHHHHHh--cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeC
Confidence 788999975 45666555 3443333 46788899988864 36899888876433455566555554445544456
Q ss_pred CCcchHHHHH-HHcccceehh-----hHHHHHHHHcCCCEEEEEcCChH
Q 016179 308 GSSNLKYDAF-SASRVALCTS-----GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 308 ~~~~~~~~~~-~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
+ .+++..+| ++||++|..| |.+.+|||+||+|.|+ ..++.+
T Consensus 358 ~-~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl 404 (485)
T PRK14099 358 Y-DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGL 404 (485)
T ss_pred C-CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCc
Confidence 6 57888877 5699999998 7777899999988776 454443
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.5e-11 Score=119.00 Aligned_cols=108 Identities=11% Similarity=0.012 Sum_probs=70.2
Q ss_pred CCCCcEEEEECCCcHHH-HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHH
Q 016179 237 PSGATVISLLPGSRLQE-VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYD 315 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~e-i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 315 (394)
++++++|++..||.+.. .+.....+++++..+ +.++++.+|.+... . .....++.+... . ++.+
T Consensus 236 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~-~------~~~~~~v~~~~~-~--p~~~ 300 (401)
T cd03784 236 AAGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG-A------EDLPDNVRVVDF-V--PHDW 300 (401)
T ss_pred hCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc-c------cCCCCceEEeCC-C--CHHH
Confidence 35678999999998742 233344455554432 56788888764321 1 112335766643 2 5788
Q ss_pred HHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 316 AFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 316 ~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
+|..||++|+..|..|+ |++++|+|+|++ +...--...++++.+
T Consensus 301 ll~~~d~~I~hgG~~t~~eal~~GvP~v~~-P~~~dQ~~~a~~~~~ 345 (401)
T cd03784 301 LLPRCAAVVHHGGAGTTAAALRAGVPQLVV-PFFGDQPFWAARVAE 345 (401)
T ss_pred HhhhhheeeecCCchhHHHHHHcCCCEEee-CCCCCcHHHHHHHHH
Confidence 99999999999998776 999999999986 333223334666653
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.4e-10 Score=121.61 Aligned_cols=224 Identities=11% Similarity=0.088 Sum_probs=128.1
Q ss_pred hcCCCEEEEeCCCCchHHHHHHHHHhcc-ccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHhc
Q 016179 114 LFRPHAVVTVDSKGFSFRLLKQLRARYS-HERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLN 192 (394)
Q Consensus 114 ~~~PD~Vi~~~~~~f~~~la~~l~~~~~-~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~~ 192 (394)
.++||+|++.|.+ +..++..++..+. ....++|+++ ..|.. .+.. ........++|++++.+|..++.+...
T Consensus 707 ~~~PDIIHaHDW~--talva~llk~~~~~~~~~~~p~V~--TiHnl-~~~~--n~lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 707 GFHPDIIHCHDWS--SAPVAWLFKDHYAHYGLSKARVVF--TIHNL-EFGA--NHIGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred CCCCCEEEECCCh--HHHHHHHHHHhhhhhccCCCCEEE--EeCCc-ccch--hHHHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 3689999987743 3333334443221 0012567532 22321 1211 133445678999999999987766443
Q ss_pred C-C-----CeEEEcCCCchhhhhhcCCCCC-CCccc-------ccCCChHHHHhhcCCCC-CCcEEEEECCCcHHHHHhh
Q 016179 193 G-L-----AATFVGHPVVEDCLELNLGKGP-EPCEL-------KMEGNSEDFKNKYSVPS-GATVISLLPGSRLQEVARM 257 (394)
Q Consensus 193 g-~-----~~~~vG~Pv~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~r~~lgl~~-~~~~IlllgGSrg~ei~~~ 257 (394)
+ + ++..+-|-+.... +.+..|. .+.++ .....+..+++++|++. +.|+|+++ ||-.+-|.
T Consensus 780 ~~l~~~~~Kl~vI~NGID~~~--w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~V--GRL~~qKG- 854 (1036)
T PLN02316 780 SAIAPHLYKFHGILNGIDPDI--WDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGII--TRLTHQKG- 854 (1036)
T ss_pred cCcccccCCEEEEECCccccc--cCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEE--eccccccC-
Confidence 2 2 2333322222111 1110000 00000 00112456788999984 67877776 57655454
Q ss_pred HHHHHHHHHHhhhhCCCeEEEEEeCCC-cChHHHHHHHhhcCC----CCEEEecCCCcchH--HHHHHHcccceehh---
Q 016179 258 LPIFAKTVELLKDSFPELITVIHVAPN-RHVENYITGLIQKWP----VPSILVPGGSSNLK--YDAFSASRVALCTS--- 327 (394)
Q Consensus 258 l~~ll~a~~~l~~~~~~~~~vi~~g~~-~~~~~~l~~~~~~~~----~~v~~~~g~~~~~~--~~~~~~ADl~I~~S--- 327 (394)
+..+++|+..+.+ +++|+++++++. ..+++.++++...++ .++.+..++ ++. +.+|++||++++.|
T Consensus 855 vdlLi~Al~~ll~--~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~--de~lah~iyaaADiflmPS~~E 930 (1036)
T PLN02316 855 IHLIKHAIWRTLE--RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTY--DEPLSHLIYAGADFILVPSIFE 930 (1036)
T ss_pred HHHHHHHHHHHhh--cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecC--CHHHHHHHHHhCcEEEeCCccc
Confidence 6778899888764 478998887652 223344555554332 246655443 343 47999999999999
Q ss_pred --hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 --GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 --Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+|||++|+|.|+ .+++++...+
T Consensus 931 P~GLvqLEAMa~GtppVv-s~vGGL~DtV 958 (1036)
T PLN02316 931 PCGLTQLTAMRYGSIPVV-RKTGGLFDTV 958 (1036)
T ss_pred CccHHHHHHHHcCCCeEE-EcCCCcHhhc
Confidence 8888899999999886 6777665544
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.7e-11 Score=118.28 Aligned_cols=289 Identities=14% Similarity=0.030 Sum_probs=148.2
Q ss_pred eEEEEeCC--chHHHH-HHHHHHHHHhcCCCCeEEEEecCh-h-hHh-ccCccccccCcceeccHHHhhhhHHHHHHHHH
Q 016179 33 RVFIVAGE--VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS-M-MSE-QGMKSLFPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 33 kIlI~aG~--~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~-~-m~~-~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
||+++++. .||--. ..++++.|.+.+.+ +.++..... . .+. .-+.....-..+.+. .+.... +.....
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~---~~~~~~ 74 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVD-TRWEVIKGDPEFFNVTKKFHNALQGADIELS--EEEKEI---YLEWNE 74 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCC-ceEEecCCChhHHHHHHHhhHhhcCCCCCCC--HHHHHH---HHHHHH
Confidence 46555554 556444 66899999987775 777655432 1 110 000000000000000 011111 111111
Q ss_pred H-HHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc-c-hHHHHHHHhhhheeecCc
Q 016179 107 E-TIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG-E-ARLKNLAAFVDHILCILP 183 (394)
Q Consensus 107 ~-~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g-~-~r~~~l~~~~d~v~~~~p 183 (394)
+ +.+.+...+||+|++.+.. +..+....+.. ++|++.++ |..+..... . +..+++.+.+|.+++..+
T Consensus 75 ~~~~~~~~~~~~Dvv~~h~~~--~~~~~~~~~~~------~~~~i~~~--H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 144 (372)
T cd03792 75 ENAERPLLDLDADVVVIHDPQ--PLALPLFKKKR------GRPWIWRC--HIDLSSPNRRVWDFLQPYIEDYDAAVFHLP 144 (372)
T ss_pred HHhccccccCCCCEEEECCCC--chhHHHhhhcC------CCeEEEEe--eeecCCCcHHHHHHHHHHHHhCCEEeecHH
Confidence 1 1123557799999976532 33333222211 57864443 322211000 0 123345566887776662
Q ss_pred ccHHHHHhcCCC--eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHH
Q 016179 184 NEEAICRLNGLA--ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261 (394)
Q Consensus 184 ~~~~~~~~~g~~--~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~l 261 (394)
. +...+++ ..++.|.+... ..+.... .+.++...++++|+++++++|+.+| |-...| ....+
T Consensus 145 ~----~~~~~~~~~~~vipngvd~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~vg--rl~~~K-g~~~l 208 (372)
T cd03792 145 E----YVPPQVPPRKVIIPPSIDPL-SGKNREL--------SPADIEYILEKYGIDPERPYITQVS--RFDPWK-DPFGV 208 (372)
T ss_pred H----hcCCCCCCceEEeCCCCCCC-ccccCCC--------CHHHHHHHHHHhCCCCCCcEEEEEe--cccccc-CcHHH
Confidence 2 2222332 22444443211 0000000 0112346778899988888888763 443333 46778
Q ss_pred HHHHHHhhhhCCCeEEEEEeCCCcC---hHHHHHHHhhc--CCCCEEEecCC--CcchHHHHHHHcccceehh-----hH
Q 016179 262 AKTVELLKDSFPELITVIHVAPNRH---VENYITGLIQK--WPVPSILVPGG--SSNLKYDAFSASRVALCTS-----GT 329 (394)
Q Consensus 262 l~a~~~l~~~~~~~~~vi~~g~~~~---~~~~l~~~~~~--~~~~v~~~~g~--~~~~~~~~~~~ADl~I~~S-----Gt 329 (394)
+++++.+.+..+++++++++++... ..+..++..+. ...++.++... ..+++.++|++||+++..| |.
T Consensus 209 l~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~ 288 (372)
T cd03792 209 IDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGL 288 (372)
T ss_pred HHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCH
Confidence 8999988777788999988875321 12222332221 22246655331 1367889999999999988 56
Q ss_pred HHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 330 VAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.+||+++|+|+|+ .+.+.....+
T Consensus 289 ~~lEA~a~G~Pvv~-s~~~~~~~~i 312 (372)
T cd03792 289 TVTEALWKGKPVIA-GPVGGIPLQI 312 (372)
T ss_pred HHHHHHHcCCCEEE-cCCCCchhhc
Confidence 77799999999886 4555544444
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.7e-10 Score=111.41 Aligned_cols=165 Identities=17% Similarity=0.157 Sum_probs=99.6
Q ss_pred HHhhhheeecCcccHHHHHhc-C-C--C-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 172 AAFVDHILCILPNEEAICRLN-G-L--A-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~~-g-~--~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
.+.+|.+++.++..++.+.+. + . + ..++-|++..... .+ ......++....+++.++++.+
T Consensus 152 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~--~~------------~~~~~~~~~~~~~~~~~~i~~~ 217 (392)
T cd03805 152 TGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSF--ES------------TSEDPDPGLLIPKSGKKTFLSI 217 (392)
T ss_pred hhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHc--Cc------------ccccccccccccCCCceEEEEE
Confidence 567999999999888876542 2 1 1 2244444433321 11 0111122333445556655554
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhhhhC---CCeEEEEEeCCCcC------hHHHHHHHhhc-CCC--CEEEecCCCcchHH
Q 016179 247 PGSRLQEVARMLPIFAKTVELLKDSF---PELITVIHVAPNRH------VENYITGLIQK-WPV--PSILVPGGSSNLKY 314 (394)
Q Consensus 247 gGSrg~ei~~~l~~ll~a~~~l~~~~---~~~~~vi~~g~~~~------~~~~l~~~~~~-~~~--~v~~~~g~~~~~~~ 314 (394)
|. -.+ ++.+..++++++++.++. +++++++++++... +.+.+++..++ .+. ++.+......+++.
T Consensus 218 -gr-l~~-~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 218 -NR-FER-KKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKE 294 (392)
T ss_pred -ee-ecc-cCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHH
Confidence 33 222 234678899999998765 78999988875321 12334444444 333 46666332235678
Q ss_pred HHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 315 DAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 315 ~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++|+.||+++..| |.+.+||+++|+|+|. .+.+.....+
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~-s~~~~~~e~i 338 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIA-CNSGGPLETV 338 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEE-ECCCCcHHHh
Confidence 9999999999877 5566799999999886 5555555554
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-10 Score=117.89 Aligned_cols=280 Identities=10% Similarity=0.030 Sum_probs=150.4
Q ss_pred CCCceEEEEeCC----chHHHH-HHHHHHHHHhcC-CCCeEEEEecCh-----------------hhHhccCc-----cc
Q 016179 29 DGELRVFIVAGE----VSGDSI-GSRLMSAMKKLA-PLPVSFSGVGGS-----------------MMSEQGMK-----SL 80 (394)
Q Consensus 29 ~~~~kIlI~aG~----~sGh~~-a~~l~~~L~~~~-~~~~~~~g~gg~-----------------~m~~~g~~-----~~ 80 (394)
+++|||.|.|-. .+|=.. ...+++.|.+++ ++ +.++...-+ .-++..+. ..
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~he-V~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v 80 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDRE-VTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI 80 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcE-EEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence 457999888765 456433 566777888887 55 777643211 00111111 00
Q ss_pred cccCcceeccHHHhhhh-HHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHH---HHHHHHhccccCCCCCeEEEeecC
Q 016179 81 FPMEDIAVMGIWELLPH-IYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRL---LKQLRARYSHERLNGPAHFHYVAP 156 (394)
Q Consensus 81 ~~~~~l~~~G~~~~l~~-~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~l---a~~l~~~~~~~~~~ip~~~~yv~~ 156 (394)
.....+++..+.+.+.. .+.++ ...++.+.+++++||+|+..+ | |++.. +.++.++ ..+++.-|+.+
T Consensus 81 ~r~~s~~~p~yp~r~~~~~r~~~-~~~~i~~~l~~~~pDVIHv~t-P-~~LG~~~~g~~~~~k------~~~vV~tyHT~ 151 (462)
T PLN02846 81 SFLPKFSIKFYPGKFSTDKRSIL-PVGDISETIPDEEADIAVLEE-P-EHLTWYHHGKRWKTK------FRLVIGIVHTN 151 (462)
T ss_pred EEecccccccCcccccccccccC-ChHHHHHHHHhcCCCEEEEcC-c-hhhhhHHHHHHHHhc------CCcEEEEECCC
Confidence 11112222222221000 00011 134678889999999998753 4 45444 3444333 12343222221
Q ss_pred c-ccc--ccCc--c----hHHHH-HH-HhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCC
Q 016179 157 S-FWA--WKGG--E----ARLKN-LA-AFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEG 225 (394)
Q Consensus 157 ~-~wa--~~~g--~----~r~~~-l~-~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~ 225 (394)
- ... +..| . +..++ +. .+||.+++.++...+ +.+.++. ...| +..++. .+ .
T Consensus 152 y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~~i~-~v~G--Vd~~~f--~~------------~ 213 (462)
T PLN02846 152 YLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRSIIC-NVHG--VNPKFL--EI------------G 213 (462)
T ss_pred hHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhCEEe-cCce--echhhc--CC------------C
Confidence 1 000 0000 0 01112 22 348999988874444 5443221 1233 323322 11 1
Q ss_pred ChHHHHhhcCCCCCC--cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEE
Q 016179 226 NSEDFKNKYSVPSGA--TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSI 303 (394)
Q Consensus 226 ~~~~~r~~lgl~~~~--~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~ 303 (394)
.+ ..++..+ +++. ++++.+ +|-+. .+.+..++++++.+.+..+++++++++.+ ++ ++.+++..++.++++.
T Consensus 214 ~~-~~~~~~~-~~~~~~~~~l~v--GRL~~-eK~~~~Li~a~~~l~~~~~~~~l~ivGdG-p~-~~~L~~~a~~l~l~~~ 286 (462)
T PLN02846 214 KL-KLEQQKN-GEQAFTKGAYYI--GKMVW-SKGYKELLKLLHKHQKELSGLEVDLYGSG-ED-SDEVKAAAEKLELDVR 286 (462)
T ss_pred cc-cHhhhcC-CCCCcceEEEEE--ecCcc-cCCHHHHHHHHHHHHhhCCCeEEEEECCC-cc-HHHHHHHHHhcCCcEE
Confidence 11 1222222 3332 334444 46554 34578899999988777788998888776 43 3456777766666666
Q ss_pred EecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEE
Q 016179 304 LVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAY 345 (394)
Q Consensus 304 ~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y 345 (394)
++.|+ .+..++|+.+|++|..| |.+++||+|+|+|+|...
T Consensus 287 vf~G~--~~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~ 331 (462)
T PLN02846 287 VYPGR--DHADPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCAN 331 (462)
T ss_pred EECCC--CCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEec
Confidence 67674 46668999999999999 788889999999988653
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-10 Score=106.04 Aligned_cols=241 Identities=16% Similarity=0.181 Sum_probs=136.1
Q ss_pred ceEEEEe-CC---chHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVA-GE---VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~a-G~---~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
|||+|.+ |+ +.||++ -..|+++|++++ ..+...+++..++ ++...++ |+... ..
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~---~~~~fl~k~~~e~-~~~~~~~-------~f~~~----------~~ 59 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRG---FACLFLTKQDIEA-IIHKVYE-------GFKVL----------EG 59 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcC---ceEEEecccchhh-hhhhhhh-------hccce----------ee
Confidence 6776654 44 568999 889999999874 4566666665543 2221111 11100 01
Q ss_pred HHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCccc-
Q 016179 107 ETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE- 185 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~- 185 (394)
+.-+.|++.++|++| +|+.+.+.-..+.++.. .+.|+ +.+..+.- ++ ++|..+++-+..
T Consensus 60 ~~~n~ik~~k~d~lI-~Dsygl~~dd~k~ik~e-----~~~k~-l~fDd~~~----~~---------~~d~d~ivN~~~~ 119 (318)
T COG3980 60 RGNNLIKEEKFDLLI-FDSYGLNADDFKLIKEE-----AGSKI-LIFDDENA----KS---------FKDNDLIVNAILN 119 (318)
T ss_pred ecccccccccCCEEE-EeccCCCHHHHHHHHHH-----hCCcE-EEecCCCc----cc---------hhhhHhhhhhhhc
Confidence 112378899999888 57557888888777732 15674 44433221 11 112222222111
Q ss_pred -HHHHHhcCCCe-EEEc---CCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHH
Q 016179 186 -EAICRLNGLAA-TFVG---HPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260 (394)
Q Consensus 186 -~~~~~~~g~~~-~~vG---~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ 260 (394)
.+.+-.-+.++ .+.| -|+|++|.. .+++.+++ +-+.++.-+|||-... .
T Consensus 120 a~~~y~~v~~k~~~~lGp~y~~lr~eF~~----------------~r~~~~~r----~~r~ilI~lGGsDpk~------l 173 (318)
T COG3980 120 ANDYYGLVPNKTRYYLGPGYAPLRPEFYA----------------LREENTER----PKRDILITLGGSDPKN------L 173 (318)
T ss_pred chhhccccCcceEEEecCCceeccHHHHH----------------hHHHHhhc----chheEEEEccCCChhh------h
Confidence 11111111234 3555 378888863 34555544 3334566678876532 2
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCC
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLP 340 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P 340 (394)
.++.++.+.+..-++.+|+. ..++.+.+. ....+.++ ++.++.. .+||+++|..||++|+.+|.++-|++..|+|
T Consensus 174 t~kvl~~L~~~~~nl~iV~g-s~~p~l~~l-~k~~~~~~-~i~~~~~--~~dma~LMke~d~aI~AaGstlyEa~~lgvP 248 (318)
T COG3980 174 TLKVLAELEQKNVNLHIVVG-SSNPTLKNL-RKRAEKYP-NINLYID--TNDMAELMKEADLAISAAGSTLYEALLLGVP 248 (318)
T ss_pred HHHHHHHhhccCeeEEEEec-CCCcchhHH-HHHHhhCC-CeeeEec--chhHHHHHHhcchheeccchHHHHHHHhcCC
Confidence 44566666554324554444 233445443 33333333 5655533 5789999999999999988777799999999
Q ss_pred EEEE
Q 016179 341 CVVA 344 (394)
Q Consensus 341 ~Iv~ 344 (394)
+.++
T Consensus 249 ~l~l 252 (318)
T COG3980 249 SLVL 252 (318)
T ss_pred ceEE
Confidence 7655
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.5e-10 Score=110.33 Aligned_cols=210 Identities=11% Similarity=0.007 Sum_probs=120.3
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcc
Q 016179 105 LKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPN 184 (394)
Q Consensus 105 ~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~ 184 (394)
+.++.+.+++++||+|++.+. .+..++..+++.. +.|..+....+.... ........+ .+.+|.+++.++.
T Consensus 73 ~~~l~~~l~~~~~Dii~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~h~~~~-~~~~~~~~~-~~~~d~~i~~S~~ 143 (359)
T PRK09922 73 VYNFSKWLKETQPDIVICIDV--ISCLYANKARKKS-----GKQFKIFSWPHFSLD-HKKHAECKK-ITCADYHLAISSG 143 (359)
T ss_pred HHHHHHHHHhcCCCEEEEcCH--HHHHHHHHHHHHh-----CCCCeEEEEecCccc-ccchhhhhh-hhcCCEEEEcCHH
Confidence 456678899999999998752 2333333333221 334211111121100 000001111 3679999999999
Q ss_pred cHHHHHhcCCC---eEEEcCCCch-hhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH-HHHhhHH
Q 016179 185 EEAICRLNGLA---ATFVGHPVVE-DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ-EVARMLP 259 (394)
Q Consensus 185 ~~~~~~~~g~~---~~~vG~Pv~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~-ei~~~l~ 259 (394)
.++.+.++|++ +.++.||+.. .+.. . .. -.++.++++.+| .... ..+ .+.
T Consensus 144 ~~~~~~~~~~~~~ki~vi~N~id~~~~~~-~-------------~~---------~~~~~~~i~~~G-rl~~~~~k-~~~ 198 (359)
T PRK09922 144 IKEQMMARGISAQRISVIYNPVEIKTIII-P-------------PP---------ERDKPAVFLYVG-RLKFEGQK-NVK 198 (359)
T ss_pred HHHHHHHcCCCHHHEEEEcCCCCHHHccC-C-------------Cc---------ccCCCcEEEEEE-EEecccCc-CHH
Confidence 99988877764 6778888852 2210 0 00 012345666654 3211 122 345
Q ss_pred HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCC---cchHHHHHHHcccceehh-----hH
Q 016179 260 IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGS---SNLKYDAFSASRVALCTS-----GT 329 (394)
Q Consensus 260 ~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~---~~~~~~~~~~ADl~I~~S-----Gt 329 (394)
.+++++..+. +++++++++.+. + ++.+++..++.+. ++.+. |+. .+++.++|+.||++|..| |.
T Consensus 199 ~l~~a~~~~~---~~~~l~ivG~g~-~-~~~l~~~~~~~~l~~~v~f~-G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~ 272 (359)
T PRK09922 199 ELFDGLSQTT---GEWQLHIIGDGS-D-FEKCKAYSRELGIEQRIIWH-GWQSQPWEVVQQKIKNVSALLLTSKFEGFPM 272 (359)
T ss_pred HHHHHHHhhC---CCeEEEEEeCCc-c-HHHHHHHHHHcCCCCeEEEe-cccCCcHHHHHHHHhcCcEEEECCcccCcCh
Confidence 5777776653 478989888653 3 3446666655443 46655 432 135677888899999988 45
Q ss_pred HHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 330 VAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.+|||+||+|+|.....+.....+
T Consensus 273 ~~lEAma~G~Pvv~s~~~~g~~eiv 297 (359)
T PRK09922 273 TLLEAMSYGIPCISSDCMSGPRDII 297 (359)
T ss_pred HHHHHHHcCCCEEEeCCCCChHHHc
Confidence 6669999999988644255554444
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.30 E-value=7e-10 Score=110.97 Aligned_cols=167 Identities=13% Similarity=0.029 Sum_probs=101.9
Q ss_pred HHhhhheeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 172 AAFVDHILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
.+.+|.+++.++..++.+.+ .+-++.++.|++..+. +.+. +......+...+++++.++|+..|.+-
T Consensus 154 ~~~ad~vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~--f~~~----------~~~~~~~~~~~~~~~~~~~i~~vgR~l 221 (396)
T cd03818 154 LAQADAGVSPTRWQRSTFPAELRSRISVIHDGIDTDR--LRPD----------PQARLRLPNGRVLTPGDEVITFVARNL 221 (396)
T ss_pred HHhCCEEECCCHHHHhhCcHhhccceEEeCCCccccc--cCCC----------chhhhcccccccCCCCCeEEEEECCCc
Confidence 56799999999988887754 2345777777764332 1110 001111222333556677777664322
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc----------ChHHH-HHHHhhcC-CCCEEEecCCC-cchHHHHH
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR----------HVENY-ITGLIQKW-PVPSILVPGGS-SNLKYDAF 317 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~----------~~~~~-l~~~~~~~-~~~v~~~~g~~-~~~~~~~~ 317 (394)
. -.+.++.+++++..+.++.|+++++++++... .+.+. +++..... ..++.+. |+. .+++.++|
T Consensus 222 ~--~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~-G~v~~~~~~~~l 298 (396)
T cd03818 222 E--PYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFL-GRVPYDQYLALL 298 (396)
T ss_pred c--cccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEe-CCCCHHHHHHHH
Confidence 2 22346788999999887789999999986321 11111 22221111 1246665 432 46799999
Q ss_pred HHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 318 SASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 318 ~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.||+.|..| |.+.+|||+||+|+|. ...+.....+
T Consensus 299 ~~adv~v~~s~~e~~~~~llEAmA~G~PVIa-s~~~g~~e~i 339 (396)
T cd03818 299 QVSDVHVYLTYPFVLSWSLLEAMACGCLVVG-SDTAPVREVI 339 (396)
T ss_pred HhCcEEEEcCcccccchHHHHHHHCCCCEEE-cCCCCchhhc
Confidence 9999999877 3355699999999886 5555555554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-09 Score=104.27 Aligned_cols=280 Identities=14% Similarity=0.043 Sum_probs=154.2
Q ss_pred eEEEEeCC-ch-HHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 33 RVFIVAGE-VS-GDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 33 kIlI~aG~-~s-Gh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
||++++.. +. +..+...+++.|.+.+.+ +.++......-.... ... .......+........+.....+.+
T Consensus 1 ki~~~~~~~~~~~~~~~~~~~~~L~~~g~~-v~v~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (355)
T cd03799 1 KIAYLVKEFPRLSETFILREILALEAAGHE-VEIFSLRPPEDTLVH-PED-----RAELARTRYLARSLALLAQALVLAR 73 (355)
T ss_pred CEEEECCCCCCcchHHHHHHHHHHHhCCCe-EEEEEecCccccccc-ccc-----cccccchHHHHHHHHHHHHHHHHHH
Confidence 46666655 33 455577888888887764 777655432110000 000 0000011111222222333445566
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+++.+||+|++.. +..+..+ ..+.++.. ++|.+++...+..|.... ....++..+.+|.+++.++..++.+.
T Consensus 74 ~~~~~~~Dii~~~~-~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vi~~s~~~~~~l~ 146 (355)
T cd03799 74 ELRRLGIDHIHAHF-GTTPATV-AMLASRLG----GIPYSFTAHGKDIFRSPD-AIDLDEKLARADFVVAISEYNRQQLI 146 (355)
T ss_pred HHHhcCCCEEEECC-CCchHHH-HHHHHHhc----CCCEEEEEecccccccCc-hHHHHHHHhhCCEEEECCHHHHHHHH
Confidence 67789999999753 2122222 23322211 567544433333332211 01334567789999999999999887
Q ss_pred hc-CC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHH
Q 016179 191 LN-GL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 266 (394)
Q Consensus 191 ~~-g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~ 266 (394)
+. +. ++.++.|++...... . .. ...+.+...|+.+ |+.. . .+....++++++
T Consensus 147 ~~~~~~~~~~~vi~~~~d~~~~~--~-------------~~------~~~~~~~~~i~~~-g~~~-~-~k~~~~l~~~~~ 202 (355)
T cd03799 147 RLLGCDPDKIHVVHCGVDLERFP--P-------------RP------PPPPGEPLRILSV-GRLV-E-KKGLDYLLEALA 202 (355)
T ss_pred HhcCCCcccEEEEeCCcCHHHcC--C-------------cc------ccccCCCeEEEEE-eeec-c-ccCHHHHHHHHH
Confidence 75 33 366777776544321 0 00 0122334445544 4432 2 234677889999
Q ss_pred HhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCC-cchHHHHHHHcccceehhh-----------HHHH
Q 016179 267 LLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGS-SNLKYDAFSASRVALCTSG-----------TVAV 332 (394)
Q Consensus 267 ~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~-~~~~~~~~~~ADl~I~~SG-----------t~tl 332 (394)
.+.+..+++++++++.+. . .+.+++...+++ .++.+. |+. .+++.++|+.||+++..|- ...+
T Consensus 203 ~l~~~~~~~~l~i~G~~~-~-~~~~~~~~~~~~~~~~v~~~-g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~ 279 (355)
T cd03799 203 LLKDRGIDFRLDIVGDGP-L-RDELEALIAELGLEDRVTLL-GAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLM 279 (355)
T ss_pred HHhhcCCCeEEEEEECCc-c-HHHHHHHHHHcCCCCeEEEC-CcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHH
Confidence 887766789988887653 2 233444444433 246655 332 3689999999999999652 3445
Q ss_pred HHHHcCCCEEEEEcCChHHHHH
Q 016179 333 ELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 333 Ea~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|++++|+|+|. .+.+.....+
T Consensus 280 Ea~a~G~Pvi~-~~~~~~~~~i 300 (355)
T cd03799 280 EAMAMGLPVIS-TDVSGIPELV 300 (355)
T ss_pred HHHHcCCCEEe-cCCCCcchhh
Confidence 99999999886 4444444433
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.1e-10 Score=109.77 Aligned_cols=286 Identities=13% Similarity=0.014 Sum_probs=150.4
Q ss_pred chHHHH-HHHHHHHHHhcCCCCeEEEEecChh-hHh-ccCccccccCcceeccH--HHhhhhHHHHHHHHHHHHHHHHhc
Q 016179 41 VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSM-MSE-QGMKSLFPMEDIAVMGI--WELLPHIYKFRVRLKETIEAALLF 115 (394)
Q Consensus 41 ~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~-m~~-~g~~~~~~~~~l~~~G~--~~~l~~~~~~~~~~~~~~~~i~~~ 115 (394)
.||.-. ...++++|.+++.+ +.++....+. ... ...........++.... .........+......+.+.+++.
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~-V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (398)
T cd03800 20 TGGQNVYVLELARALARLGHE-VDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRRE 98 (398)
T ss_pred CCceeehHHHHHHHHhccCce-EEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhc
Confidence 466554 67899999887764 7776543221 110 00111111111111100 000001111222334456667777
Q ss_pred --CCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccC-----------cc--hHHHHHHHhhhheee
Q 016179 116 --RPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG-----------GE--ARLKNLAAFVDHILC 180 (394)
Q Consensus 116 --~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~-----------g~--~r~~~l~~~~d~v~~ 180 (394)
+||+|++.+. ....++..+++.. ++|++..+ +..+.... .. ..-+++.+.+|.+++
T Consensus 99 ~~~~Div~~~~~--~~~~~~~~~~~~~-----~~~~i~~~--h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 99 GGRPDLIHAHYW--DSGLVALLLARRL-----GIPLVHTF--HSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred CCCccEEEEecC--ccchHHHHHHhhc-----CCceEEEe--ecccccCCcccccccccchhhhhhHHHHHHhhCCEEEE
Confidence 9999997642 2222222232221 67853222 22111000 00 011234667999999
Q ss_pred cCcccHHHHHhcC-C---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHh
Q 016179 181 ILPNEEAICRLNG-L---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 256 (394)
Q Consensus 181 ~~p~~~~~~~~~g-~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~ 256 (394)
.++...+.+.+.+ . ++.++.|++..... .+ ..+....+++++.+++.++|+.+ |+.. . .+
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~i~~~-gr~~-~-~k 233 (398)
T cd03800 170 STPQEAEELYSLYGAYPRRIRVVPPGVDLERF--TP-----------YGRAEARRARLLRDPDKPRILAV-GRLD-P-RK 233 (398)
T ss_pred cCHHHHHHHHHHccccccccEEECCCCCccce--ec-----------ccchhhHHHhhccCCCCcEEEEE-cccc-c-cc
Confidence 9998877765533 2 24566555532211 10 01111224556666666666655 4433 2 23
Q ss_pred hHHHHHHHHHHhhhhCCCeEEEEEeCCCcChH----HHHHHHhhcCC--CCEEEecCCC-cchHHHHHHHcccceehh--
Q 016179 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVE----NYITGLIQKWP--VPSILVPGGS-SNLKYDAFSASRVALCTS-- 327 (394)
Q Consensus 257 ~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~----~~l~~~~~~~~--~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-- 327 (394)
.+..+++++..+.++.++++++++++...... ..++...+..+ .++.++ |+. .+++.++++.||+++..|
T Consensus 234 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~~~~~adi~l~ps~~ 312 (398)
T cd03800 234 GIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFP-GRVSREDLPALYRAADVFVNPALY 312 (398)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEe-ccCCHHHHHHHHHhCCEEEecccc
Confidence 46678899999887778899999987543211 11222333332 246655 332 357999999999999877
Q ss_pred ---hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 ---GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 ---Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+||+++|+|+|+ .+.++....+
T Consensus 313 e~~~~~l~Ea~a~G~Pvi~-s~~~~~~e~i 341 (398)
T cd03800 313 EPFGLTALEAMACGLPVVA-TAVGGPRDIV 341 (398)
T ss_pred cccCcHHHHHHhcCCCEEE-CCCCCHHHHc
Confidence 3455599999999875 5566655555
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.8e-10 Score=110.57 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=68.1
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHH
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAF 317 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 317 (394)
+++++|++..||....-...+..+++++. + .+.++++.+|++.+.. .++ ....++.+. ++ .+ ..++|
T Consensus 223 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~---~--~~~~~i~~~g~~~~~~-~~~----~~~~~v~~~-~~-~p-~~~ll 289 (392)
T TIGR01426 223 DGRPVVLISLGTVFNNQPSFYRTCVEAFR---D--LDWHVVLSVGRGVDPA-DLG----ELPPNVEVR-QW-VP-QLEIL 289 (392)
T ss_pred CCCCEEEEecCccCCCCHHHHHHHHHHHh---c--CCCeEEEEECCCCChh-Hhc----cCCCCeEEe-CC-CC-HHHHH
Confidence 56788999888853211113333444433 2 2467888887643321 121 223356655 33 23 35899
Q ss_pred HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 318 SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 318 ~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
+.||++|+.+|+.|+ |++++|+|+|+++...- .+..++++.+
T Consensus 290 ~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~d-q~~~a~~l~~ 332 (392)
T TIGR01426 290 KKADAFITHGGMNSTMEALFNGVPMVAVPQGAD-QPMTARRIAE 332 (392)
T ss_pred hhCCEEEECCCchHHHHHHHhCCCEEecCCccc-HHHHHHHHHH
Confidence 999999999999876 99999999999865532 3445666654
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-09 Score=103.25 Aligned_cols=298 Identities=15% Similarity=0.137 Sum_probs=156.9
Q ss_pred CCceEEEEeCCch--HHHH-HHHHHHHHHhcCCCCeEEEEe-cChhh---H-hccCccccccCcce--eccHH---Hhhh
Q 016179 30 GELRVFIVAGEVS--GDSI-GSRLMSAMKKLAPLPVSFSGV-GGSMM---S-EQGMKSLFPMEDIA--VMGIW---ELLP 96 (394)
Q Consensus 30 ~~~kIlI~aG~~s--Gh~~-a~~l~~~L~~~~~~~~~~~g~-gg~~m---~-~~g~~~~~~~~~l~--~~G~~---~~l~ 96 (394)
..+||++=+-.+. ||+. +..|++.|.+..++ .++..+ ||+.. . .+|++.. .+..+. -.|.. +.--
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~-~~Il~IsG~~~~~~F~~~~gVd~V-~LPsl~k~~~G~~~~~d~~~ 85 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLG-FDILIISGGPPAGGFPGPAGVDFV-KLPSLIKGDNGEYGLVDLDG 85 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccC-ceEEEEeCCCccCCCCCcccCceE-ecCceEecCCCceeeeecCC
Confidence 4568998888754 6999 99999999987665 776544 33421 1 1333321 111111 11221 0000
Q ss_pred hHHHHHHHH-HHHHHHHHhcCCCEEEEeC-CCCc-h---HHHHHHHHHhccccCCCCCe-----EEEeecCcc--ccccC
Q 016179 97 HIYKFRVRL-KETIEAALLFRPHAVVTVD-SKGF-S---FRLLKQLRARYSHERLNGPA-----HFHYVAPSF--WAWKG 163 (394)
Q Consensus 97 ~~~~~~~~~-~~~~~~i~~~~PD~Vi~~~-~~~f-~---~~la~~l~~~~~~~~~~ip~-----~~~yv~~~~--wa~~~ 163 (394)
.+-.+.+.- .-++..++.+|||++|. | +|.- - ......++..+ ..++ +.+ .|+. -.|+.
T Consensus 86 ~l~e~~~~Rs~lil~t~~~fkPDi~IV-d~~P~Glr~EL~ptL~yl~~~~-----t~~vL~lr~i~D--~p~~~~~~w~~ 157 (400)
T COG4671 86 DLEETKKLRSQLILSTAETFKPDIFIV-DKFPFGLRFELLPTLEYLKTTG-----TRLVLGLRSIRD--IPQELEADWRR 157 (400)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEEE-eccccchhhhhhHHHHHHhhcC-----CcceeehHhhhh--chhhhccchhh
Confidence 011111111 12466778999998884 6 3311 0 12334444331 1232 112 2322 11221
Q ss_pred cchHHHHHHHhhhheeecCc-ccHHHHHhcCC------CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCC
Q 016179 164 GEARLKNLAAFVDHILCILP-NEEAICRLNGL------AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSV 236 (394)
Q Consensus 164 g~~r~~~l~~~~d~v~~~~p-~~~~~~~~~g~------~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl 236 (394)
. .-...+.++-|.|.+--+ .-.+....+.. +++|||-- ...+.... ....+ .
T Consensus 158 ~-~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~~~-------------~p~~~-----~- 216 (400)
T COG4671 158 A-ETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPHLP-------------LPPHE-----A- 216 (400)
T ss_pred h-HHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcCCC-------------CCCcC-----C-
Confidence 0 012346889999886553 32332222222 36788853 11111000 00000 0
Q ss_pred CCCCcEEEEECCCcH-HHHHhhHHHHHHHHHHhhhhCCCeE--EEEEeCCCcChHHHHHHHhhcC--CCCEEEecCCCcc
Q 016179 237 PSGATVISLLPGSRL-QEVARMLPIFAKTVELLKDSFPELI--TVIHVAPNRHVENYITGLIQKW--PVPSILVPGGSSN 311 (394)
Q Consensus 237 ~~~~~~IlllgGSrg-~ei~~~l~~ll~a~~~l~~~~~~~~--~vi~~g~~~~~~~~l~~~~~~~--~~~v~~~~g~~~~ 311 (394)
++...++...||++- +| ++..+++|...+ ++++ .++++|++-- +...+++...- ..+++++.+ .+
T Consensus 217 pE~~~Ilvs~GGG~dG~e---Li~~~l~A~~~l----~~l~~~~~ivtGP~MP-~~~r~~l~~~A~~~p~i~I~~f--~~ 286 (400)
T COG4671 217 PEGFDILVSVGGGADGAE---LIETALAAAQLL----AGLNHKWLIVTGPFMP-EAQRQKLLASAPKRPHISIFEF--RN 286 (400)
T ss_pred CccceEEEecCCChhhHH---HHHHHHHHhhhC----CCCCcceEEEeCCCCC-HHHHHHHHHhcccCCCeEEEEh--hh
Confidence 233333444444443 23 334555555544 3443 7888998632 22223322221 236788765 68
Q ss_pred hHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHH--HHhhccCCccchhhhhc
Q 016179 312 LKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWF--IRYKAKIPYISLPNILL 371 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~--a~~~vk~~~~~l~Nil~ 371 (394)
++.++|+.||.+|+.+|-.|. |...+|+|++++....+-..++ |+++- -.+|...|.
T Consensus 287 ~~~~ll~gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~---~LGL~dvL~ 346 (400)
T COG4671 287 DFESLLAGARLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLE---ELGLVDVLL 346 (400)
T ss_pred hHHHHHHhhheeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHH---hcCcceeeC
Confidence 999999999999999999887 9999999999998777666666 45665 345555554
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-10 Score=119.57 Aligned_cols=208 Identities=11% Similarity=0.016 Sum_probs=125.8
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHH---HHHHHhccccCCCCCeEEEeecCc-ccc--ccCc--ch----HHHHH-
Q 016179 105 LKETIEAALLFRPHAVVTVDSKGFSFRLL---KQLRARYSHERLNGPAHFHYVAPS-FWA--WKGG--EA----RLKNL- 171 (394)
Q Consensus 105 ~~~~~~~i~~~~PD~Vi~~~~~~f~~~la---~~l~~~~~~~~~~ip~~~~yv~~~-~wa--~~~g--~~----r~~~l- 171 (394)
+..+.+.+.+++||+|++.. | +++..+ .++.++. + |++..|+-+- ..+ +..+ .. .++++
T Consensus 423 ~gdI~~~L~~f~PDVVHLat-P-~~LGw~~~Glr~ArKl-----~-PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~v 494 (794)
T PLN02501 423 AGDTSQFIPSKDADIAILEE-P-EHLNWYHHGKRWTDKF-----N-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWV 494 (794)
T ss_pred hHHHHHHhhccCCCEEEECC-c-hhhccHHHHHHHHHHc-----C-CeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHHH
Confidence 56778899999999999864 4 444333 2233331 4 7544443221 001 0001 00 11122
Q ss_pred HHh-hhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 172 AAF-VDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 172 ~~~-~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
.++ ||++++.+.... .+.+.++ ...|-|..++. . +..+...++++|++.+.+.++++| |
T Consensus 495 ~r~hcD~VIaPS~atq-~L~~~vI---~nVnGVDte~F--~------------P~~r~~~~r~lgi~~~~kgiLfVG--R 554 (794)
T PLN02501 495 TRAYCHKVLRLSAATQ-DLPKSVI---CNVHGVNPKFL--K------------IGEKVAEERELGQQAFSKGAYFLG--K 554 (794)
T ss_pred HHhhCCEEEcCCHHHH-Hhcccce---eeccccccccc--C------------CcchhHHHHhcCCccccCceEEEE--c
Confidence 322 799998886555 3443332 22233322322 1 122333345677766555566663 6
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh---
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S--- 327 (394)
-..-| .+..++++++.+.+..+++++++++.+ +. ++.+++...+.++++.++.+ .++..++|+.+|++|..|
T Consensus 555 La~EK-Gld~LLeAla~L~~~~pnvrLvIVGDG-P~-reeLe~la~eLgL~V~FLG~--~dd~~~lyasaDVFVlPS~sE 629 (794)
T PLN02501 555 MVWAK-GYRELIDLLAKHKNELDGFNLDVFGNG-ED-AHEVQRAAKRLDLNLNFLKG--RDHADDSLHGYKVFINPSISD 629 (794)
T ss_pred ccccC-CHHHHHHHHHHHHhhCCCeEEEEEcCC-cc-HHHHHHHHHHcCCEEEecCC--CCCHHHHHHhCCEEEECCCcc
Confidence 55434 467899999988776788999888866 33 34566666666666666543 567888999999999999
Q ss_pred --hHHHHHHHHcCCCEEEEE
Q 016179 328 --GTVAVELQLARLPCVVAY 345 (394)
Q Consensus 328 --Gt~tlEa~a~G~P~Iv~y 345 (394)
|.+++||+|||+|+|...
T Consensus 630 gFGlVlLEAMA~GlPVVATd 649 (794)
T PLN02501 630 VLCTATAEALAMGKFVVCAD 649 (794)
T ss_pred cchHHHHHHHHcCCCEEEec
Confidence 778889999999988753
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-09 Score=103.67 Aligned_cols=283 Identities=13% Similarity=0.031 Sum_probs=145.1
Q ss_pred eEEEEeCC----chH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 33 RVFIVAGE----VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 33 kIlI~aG~----~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
||++++.. .|| ..+...++++|.+.+.+ ++++................+...+...+..........++..+
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIE-VAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQL-- 77 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCc-eEEEecCCCCcchhhhccCceEEEeecccccccccccHHHHHHH--
Confidence 45555422 345 45578899999987764 88776653221110000000111111111111111111111111
Q ss_pred HHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc---cccccCcchHHHHHHHhhhheeecCcc
Q 016179 108 TIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS---FWAWKGGEARLKNLAAFVDHILCILPN 184 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~---~wa~~~g~~r~~~l~~~~d~v~~~~p~ 184 (394)
+ ++..+||+|++.+ +.....+...+..+ ++|.++++.... .+.+.......+++.+.+|.+++.++.
T Consensus 78 --~-~~~~~~Dii~~~~-~~~~~~~~~~~~~~------~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~ 147 (357)
T cd03795 78 --K-KLAKKADVIHLHF-PNPLADLALLLLPR------KKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPN 147 (357)
T ss_pred --H-hcCCCCCEEEEec-CcchHHHHHHHhcc------CceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHH
Confidence 1 5678999888754 21122222222211 567655553211 011110001223457789999999998
Q ss_pred cHHHHHhc---CCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHH
Q 016179 185 EEAICRLN---GLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261 (394)
Q Consensus 185 ~~~~~~~~---g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~l 261 (394)
..+.+... ..++.++.|++...... + ...........+.+.++|+.. |+.. +.+ ....+
T Consensus 148 ~~~~~~~~~~~~~~~~~i~~gi~~~~~~--~-------------~~~~~~~~~~~~~~~~~i~~~-G~~~-~~K-~~~~l 209 (357)
T cd03795 148 YAETSPVLRRFRDKVRVIPLGLDPARYP--R-------------PDALEEAIWRRAAGRPFFLFV-GRLV-YYK-GLDVL 209 (357)
T ss_pred HHHHHHHhcCCccceEEecCCCChhhcC--C-------------cchhhhHhhcCCCCCcEEEEe-cccc-ccc-CHHHH
Confidence 87765432 23566777776443221 0 011000223344555655554 4433 233 46678
Q ss_pred HHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCC-cchHHHHHHHcccceehh-------hHHH
Q 016179 262 AKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGS-SNLKYDAFSASRVALCTS-------GTVA 331 (394)
Q Consensus 262 l~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-------Gt~t 331 (394)
+++++++. ++++++++.+. ....+++..++.+ .++.+. |+. .+++.++++.||+++..| |.+.
T Consensus 210 i~a~~~l~----~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~-g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~ 282 (357)
T cd03795 210 LEAAAALP----DAPLVIVGEGP--LEAELEALAAALGLLDRVRFL-GRLDDEEKAALLAACDVFVFPSVERSEAFGIVL 282 (357)
T ss_pred HHHHHhcc----CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEc-CCCCHHHHHHHHHhCCEEEeCCcccccccchHH
Confidence 88888774 68888887653 2344555443332 357665 443 356899999999999776 5556
Q ss_pred HHHHHcCCCEEEEEcCChHHHHH
Q 016179 332 VELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 332 lEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+||+++|+|+|. .+.+.....+
T Consensus 283 ~Ea~~~g~Pvi~-~~~~~~~~~i 304 (357)
T cd03795 283 LEAMAFGKPVIS-TEIGTGGSYV 304 (357)
T ss_pred HHHHHcCCCEEe-cCCCCchhHH
Confidence 699999999886 4555444333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=3e-09 Score=102.82 Aligned_cols=264 Identities=13% Similarity=-0.003 Sum_probs=140.6
Q ss_pred ceEEEEeC--------CchH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHH
Q 016179 32 LRVFIVAG--------EVSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 32 ~kIlI~aG--------~~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
|||++++. ..|| ..+...++++|.+.+.+ +.++...+........... + . ..............
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~-V~v~~~~~~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~ 73 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHE-VTLFASGDSKTAAPLVPVV-P---E--PLRLDAPGRDRAEA 73 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCce-EEEEecCCCCcccceeecc-C---C--CcccccchhhHhhH
Confidence 68877654 2233 66688999999987764 7777765532111101100 0 0 00000011112233
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecC
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL 182 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~ 182 (394)
.....+.+.+++.+||+|++.+.. ...++ .+ . .++|++.+... ..+.+. . +........+.+++.+
T Consensus 74 ~~~~~~~~~~~~~~~Divh~~~~~--~~~~~--~~-~-----~~~~~v~~~h~-~~~~~~-~--~~~~~~~~~~~~~~~s 139 (335)
T cd03802 74 EALALAERALAAGDFDIVHNHSLH--LPLPF--AR-P-----LPVPVVTTLHG-PPDPEL-L--KLYYAARPDVPFVSIS 139 (335)
T ss_pred HHHHHHHHHHhcCCCCEEEecCcc--cchhh--hc-c-----cCCCEEEEecC-CCCccc-c--hHHHhhCcCCeEEEec
Confidence 445567788889999999986532 22211 11 1 16786433211 111111 1 2222344567777777
Q ss_pred cccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHH
Q 016179 183 PNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFA 262 (394)
Q Consensus 183 p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll 262 (394)
+...+.+... .++.++.|++..... . . .+.+++.|+.+ | |-.+.+. ...++
T Consensus 140 ~~~~~~~~~~-~~~~vi~ngvd~~~~--~---------------~--------~~~~~~~i~~~-G-r~~~~Kg-~~~li 190 (335)
T cd03802 140 DAQRRPWPPL-PWVATVHNGIDLDDY--P---------------F--------RGPKGDYLLFL-G-RISPEKG-PHLAI 190 (335)
T ss_pred HHHHhhcccc-cccEEecCCcChhhC--C---------------C--------CCCCCCEEEEE-E-eeccccC-HHHHH
Confidence 7776665443 356667666533221 1 0 01234455555 3 3333443 45566
Q ss_pred HHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcC---CCCEEEecCCC-cchHHHHHHHcccceehh------hHHHH
Q 016179 263 KTVELLKDSFPELITVIHVAPNRHVENYITGLIQKW---PVPSILVPGGS-SNLKYDAFSASRVALCTS------GTVAV 332 (394)
Q Consensus 263 ~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~---~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S------Gt~tl 332 (394)
++++. .++++++++.+.. . +......... ..++.+. |+. .+++.++|+.||+++..| |.+.+
T Consensus 191 ~~~~~-----~~~~l~i~G~~~~-~-~~~~~~~~~~~~~~~~v~~~-G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~l 262 (335)
T cd03802 191 RAARR-----AGIPLKLAGPVSD-P-DYFYREIAPELLDGPDIEYL-GEVGGAEKAELLGNARALLFPILWEEPFGLVMI 262 (335)
T ss_pred HHHHh-----cCCeEEEEeCCCC-H-HHHHHHHHHhcccCCcEEEe-CCCCHHHHHHHHHhCcEEEeCCcccCCcchHHH
Confidence 66543 4688888776532 1 2222222222 2357666 442 346789999999999876 44556
Q ss_pred HHHHcCCCEEEEEcCChHHHHH
Q 016179 333 ELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 333 Ea~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|||++|+|+|. ...+.....+
T Consensus 263 EAma~G~PvI~-~~~~~~~e~i 283 (335)
T cd03802 263 EAMACGTPVIA-FRRGAVPEVV 283 (335)
T ss_pred HHHhcCCCEEE-eCCCCchhhe
Confidence 99999999886 5555555444
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.4e-09 Score=101.06 Aligned_cols=153 Identities=12% Similarity=0.110 Sum_probs=95.1
Q ss_pred HHhhhheeecCcccHHHH-HhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 172 AAFVDHILCILPNEEAIC-RLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~-~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
.+.+|.+++.++..++.+ ..+|.+..++.|++..... ..+.+.+++++++++. .++.+ |..
T Consensus 141 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~ngv~~~~~----------------~~~~~~~~~~~~~~~~-~i~~~-G~~ 202 (363)
T cd04955 141 VKFADRLIADSPGIKEYLKEKYGRDSTYIPYGADHVVS----------------SEEDEILKKYGLEPGR-YYLLV-GRI 202 (363)
T ss_pred HhhccEEEeCCHHHHHHHHHhcCCCCeeeCCCcChhhc----------------chhhhhHHhcCCCCCc-EEEEE-ecc
Confidence 567899999999999888 5667666677776643221 0112344566665543 45554 433
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC--hHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehh
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH--VENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTS 327 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~--~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S 327 (394)
. +.+ ....++++++.+.. ++++++++++... +.+.+.+.. ....++.+. |+. .+++.++++.||+++..|
T Consensus 203 ~-~~K-g~~~li~a~~~l~~---~~~l~ivG~~~~~~~~~~~~~~~~-~~~~~V~~~-g~~~~~~~~~~~~~ad~~v~ps 275 (363)
T cd04955 203 V-PEN-NIDDLIEAFSKSNS---GKKLVIVGNADHNTPYGKLLKEKA-AADPRIIFV-GPIYDQELLELLRYAALFYLHG 275 (363)
T ss_pred c-ccC-CHHHHHHHHHhhcc---CceEEEEcCCCCcchHHHHHHHHh-CCCCcEEEc-cccChHHHHHHHHhCCEEEeCC
Confidence 2 333 35678888887743 6888888875221 222222111 122256665 432 456889999999999877
Q ss_pred ------hHHHHHHHHcCCCEEEEEcCChH
Q 016179 328 ------GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 328 ------Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
|.+.+||+++|+|+|.. +.+..
T Consensus 276 ~~~e~~~~~~~EAma~G~PvI~s-~~~~~ 303 (363)
T cd04955 276 HSVGGTNPSLLEAMAYGCPVLAS-DNPFN 303 (363)
T ss_pred ccCCCCChHHHHHHHcCCCEEEe-cCCcc
Confidence 34556999999998864 44433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-09 Score=110.83 Aligned_cols=222 Identities=12% Similarity=-0.011 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCC-CchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchH-HHH---H----
Q 016179 101 FRVRLKETIEAALLFRPHAVVTVDSK-GFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEAR-LKN---L---- 171 (394)
Q Consensus 101 ~~~~~~~~~~~i~~~~PD~Vi~~~~~-~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r-~~~---l---- 171 (394)
+...+.++..++++++||+|++..+. .+-..+++++. ++|++++-. +..+ .....+ ..+ +
T Consensus 265 ~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~la--------gvpviv~~~-h~~~--~~~~~r~~~~e~~~~~~a 333 (578)
T PRK15490 265 CKYGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIA--------GVPRIQLGL-RGLP--PVVRKRLFKPEYEPLYQA 333 (578)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhc--------CCCEEEEee-cccC--CcchhhHHHHHHHHhhhh
Confidence 45568889999999999999987632 12233444432 688755521 2111 000001 111 1
Q ss_pred ---HHhhhheeecCcccHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHh--hcCCCCCCcE
Q 016179 172 ---AAFVDHILCILPNEEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKN--KYSVPSGATV 242 (394)
Q Consensus 172 ---~~~~d~v~~~~p~~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~--~lgl~~~~~~ 242 (394)
.+.+| +++.+....+.+.+ .+++ +.++-|.+.... |.+. .....+.++ ..+++++.++
T Consensus 334 ~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~r--f~p~----------~~~~~~~r~~~~~~l~~~~~v 400 (578)
T PRK15490 334 LAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPS--TEPS----------SEVPHKIWQQFTQKTQDADTT 400 (578)
T ss_pred ceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhh--cCcc----------chhhHHHHHHhhhccCCCCcE
Confidence 22333 34445544555543 3554 455555553321 1110 001112333 3355556666
Q ss_pred EEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHc
Q 016179 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSAS 320 (394)
Q Consensus 243 IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~A 320 (394)
|+.++ |-...+. ...+++++..+.+..|++++++++++. .++.+++...+.+. ++.+. |+ .+|++++|+.|
T Consensus 401 Ig~Vg--Rl~~~Kg-~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~Fl-G~-~~Dv~~~LaaA 473 (578)
T PRK15490 401 IGGVF--RFVGDKN-PFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFV-GA-SRDVGYWLQKM 473 (578)
T ss_pred EEEEE--EEehhcC-HHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEEC-CC-hhhHHHHHHhC
Confidence 66543 3322333 456777887777667899999988763 23456666555443 46666 55 68999999999
Q ss_pred ccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 321 RVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 321 Dl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|++|..| |.+.+|||++|+|+|. ++.+.....+
T Consensus 474 DVfVlPS~~EGfp~vlLEAMA~GlPVVA-TdvGG~~EiV 511 (578)
T PRK15490 474 NVFILFSRYEGLPNVLIEAQMVGVPVIS-TPAGGSAECF 511 (578)
T ss_pred CEEEEcccccCccHHHHHHHHhCCCEEE-eCCCCcHHHc
Confidence 9999987 5566799999999885 5666555544
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.9e-09 Score=102.43 Aligned_cols=272 Identities=11% Similarity=-0.018 Sum_probs=144.4
Q ss_pred chHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHhcCCCEE
Q 016179 41 VSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV 120 (394)
Q Consensus 41 ~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~~~PD~V 120 (394)
+|...++..++++|.+.... +.++............... ............. ..............++..+||++
T Consensus 15 gG~~~~~~~l~~~L~~~~~~-v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dii 89 (365)
T cd03809 15 TGIGRYARELLRALLKLDPE-EVLLLLPGAPGLLLLPLRA-ALRLLLRLPRRLL---WGLLFLLRAGDRLLLLLLGLDLL 89 (365)
T ss_pred CcHHHHHHHHHHHHHhcCCc-eEEEEecCccccccccchh-ccccccccccccc---cchhhHHHHHHHHHhhhcCCCee
Confidence 34466789999999987664 6655443221111000000 0000000000000 11122222333445556899999
Q ss_pred EEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccccc-----Cc------chHHHHHHHhhhheeecCcccHHHH
Q 016179 121 VTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWK-----GG------EARLKNLAAFVDHILCILPNEEAIC 189 (394)
Q Consensus 121 i~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~-----~g------~~r~~~l~~~~d~v~~~~p~~~~~~ 189 (394)
++.+...+.. +.. ++|++++. +..|.+. .. .....++.+.+|.+++.++..++.+
T Consensus 90 ~~~~~~~~~~------~~~------~~~~i~~~--hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 90 HSPHNTAPLL------RLR------GVPVVVTI--HDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred eecccccCcc------cCC------CCCEEEEe--ccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 9876322221 111 57754432 2222110 00 0011234677999999999988887
Q ss_pred Hhc-CC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHH
Q 016179 190 RLN-GL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 265 (394)
Q Consensus 190 ~~~-g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~ 265 (394)
.+. +. ++.++.|++...... ...... +.+...+++.++|+.+| +... .+....+++++
T Consensus 156 ~~~~~~~~~~~~vi~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~i~~~G-~~~~--~K~~~~~l~~~ 217 (365)
T cd03809 156 LRYLGVPPDKIVVIPLGVDPRFRP--------------PPAEAE-VLRALYLLPRPYFLYVG-TIEP--RKNLERLLEAF 217 (365)
T ss_pred HHHhCcCHHHEEeeccccCccccC--------------CCchHH-HHHHhcCCCCCeEEEeC-CCcc--ccCHHHHHHHH
Confidence 653 32 356777776544321 011111 33444555666666654 4432 23467788999
Q ss_pred HHhhhhCCCeEEEEEeCCCcChHHHHHHHhhc--CCCCEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcC
Q 016179 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQK--WPVPSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLAR 338 (394)
Q Consensus 266 ~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G 338 (394)
..+.+..+++++++.+.......... ..... ...++++......+++.++|+.||+++..| |...+||+++|
T Consensus 218 ~~~~~~~~~~~l~i~G~~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G 296 (365)
T cd03809 218 ARLPAKGPDPKLVIVGKRGWLNEELL-ARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACG 296 (365)
T ss_pred HHHHHhcCCCCEEEecCCccccHHHH-HHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCC
Confidence 99887766788888876543322222 21112 222466553321467899999999999887 34556999999
Q ss_pred CCEEEEEcCChHH
Q 016179 339 LPCVVAYRAHFLT 351 (394)
Q Consensus 339 ~P~Iv~y~~~~~~ 351 (394)
+|+|. .+.+...
T Consensus 297 ~pvI~-~~~~~~~ 308 (365)
T cd03809 297 TPVIA-SNISSLP 308 (365)
T ss_pred CcEEe-cCCCCcc
Confidence 99876 4554443
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.2e-12 Score=111.23 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=64.9
Q ss_pred EEEEECCCcHHH-HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHc
Q 016179 242 VISLLPGSRLQE-VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSAS 320 (394)
Q Consensus 242 ~IlllgGSrg~e-i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~A 320 (394)
||+++|||.|+. +++.+..+++ .+....++.++++++|++ .+++. .......+.++.++.+ .++|.++|+.|
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~---~~~~~~~~~~viv~~G~~-~~~~~-~~~~~~~~~~v~~~~~--~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILE---LLAEKHKNIQVIVQTGKN-NYEEL-KIKVENFNPNVKVFGF--VDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHH---HHHHHHHHCCCCCCCTTC-ECHHH-CCCHCCTTCCCEEECS--SSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHH---HHhhcCCCcEEEEEECCC-cHHHH-HHHHhccCCcEEEEec--hhhHHHHHHHc
Confidence 689999999985 6665443333 332222357889999986 33332 2223333346777754 57899999999
Q ss_pred ccceehhhHHHH-HHHHcCCCEEEEE
Q 016179 321 RVALCTSGTVAV-ELQLARLPCVVAY 345 (394)
Q Consensus 321 Dl~I~~SGt~tl-Ea~a~G~P~Iv~y 345 (394)
|++||++|+.|+ |++++|+|+|++.
T Consensus 74 DlvIs~aG~~Ti~E~l~~g~P~I~ip 99 (167)
T PF04101_consen 74 DLVISHAGAGTIAEALALGKPAIVIP 99 (167)
T ss_dssp SEEEECS-CHHHHHHHHCT--EEEE-
T ss_pred CEEEeCCCccHHHHHHHcCCCeeccC
Confidence 999999999887 9999999999873
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4e-09 Score=106.17 Aligned_cols=252 Identities=14% Similarity=0.017 Sum_probs=143.4
Q ss_pred HHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccC---cchHHHHHHHhhhheeecCccc
Q 016179 109 IEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG---GEARLKNLAAFVDHILCILPNE 185 (394)
Q Consensus 109 ~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~---g~~r~~~l~~~~d~v~~~~p~~ 185 (394)
.+.+++.+||+|++. + +.+...+..+++.+.. +.|+++.++...++.... ......++.+.+|.+++.++..
T Consensus 111 ~~~~~~~~~diihaH-~-~~~~~~~~~~~~~~~~---~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~ 185 (406)
T PRK15427 111 AQVATPFVADVFIAH-F-GPAGVTAAKLRELGVL---RGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLW 185 (406)
T ss_pred hhhhccCCCCEEEEc-C-ChHHHHHHHHHHhCCC---CCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHH
Confidence 344567789999974 3 2344445555442111 223333333333321100 0002234556799999999999
Q ss_pred HHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHH
Q 016179 186 EAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFA 262 (394)
Q Consensus 186 ~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll 262 (394)
++.+.+.|++ +.++.|.+..... .+ ..+ . .+.+...|+.+ |.. .+- +.+..++
T Consensus 186 ~~~l~~~g~~~~ki~vi~nGvd~~~f--~~------------~~~----~---~~~~~~~il~v-Grl-~~~-Kg~~~ll 241 (406)
T PRK15427 186 AGRLQKMGCPPEKIAVSRMGVDMTRF--SP------------RPV----K---APATPLEIISV-ARL-TEK-KGLHVAI 241 (406)
T ss_pred HHHHHHcCCCHHHEEEcCCCCCHHHc--CC------------Ccc----c---cCCCCeEEEEE-eCc-chh-cCHHHHH
Confidence 9888877764 5566665533221 10 000 0 01223345544 433 333 3467899
Q ss_pred HHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCC-cchHHHHHHHcccceehh-----------h
Q 016179 263 KTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGS-SNLKYDAFSASRVALCTS-----------G 328 (394)
Q Consensus 263 ~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----------G 328 (394)
++++.+.++.+++++++++++. .++.+++..++.+. ++.+. |+. .+++.++|+.||++|..| |
T Consensus 242 ~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~-G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p 318 (406)
T PRK15427 242 EACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP-GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIP 318 (406)
T ss_pred HHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe-CCCCHHHHHHHHHhCCEEEECCccCCCCCccCcc
Confidence 9999998777889999888763 24456666665554 36555 442 467999999999999876 2
Q ss_pred HHHHHHHHcCCCEEEEEcCChHHHHHHH----hhcc-CCccchhh----hhc-CCCC-------cccccCCCCCHHHHHH
Q 016179 329 TVAVELQLARLPCVVAYRAHFLTEWFIR----YKAK-IPYISLPN----ILL-DSPI-------IPEALLQACTPDTLTH 391 (394)
Q Consensus 329 t~tlEa~a~G~P~Iv~y~~~~~~~~~a~----~~vk-~~~~~l~N----il~-~~~i-------~pEliq~~~~~~~i~~ 391 (394)
.+.+|||++|+|+|. ...+.+...+.. .++. .+.-++.+ ++. +.+. .-+.++++++++.+++
T Consensus 319 ~~llEAma~G~PVI~-t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~ 397 (406)
T PRK15427 319 VALMEAMAVGIPVVS-TLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINR 397 (406)
T ss_pred HHHHHHHhCCCCEEE-eCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 345699999999876 566666655521 2332 12223332 333 3322 2235556677777766
Q ss_pred Hh
Q 016179 392 LL 393 (394)
Q Consensus 392 ~~ 393 (394)
.+
T Consensus 398 ~l 399 (406)
T PRK15427 398 EL 399 (406)
T ss_pred HH
Confidence 54
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.7e-09 Score=96.47 Aligned_cols=269 Identities=16% Similarity=0.189 Sum_probs=152.2
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEE--ecC--hhhHhccCccccccCcceeccHHHhhh-hHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSG--VGG--SMMSEQGMKSLFPMEDIAVMGIWELLP-HIYKFRVRL 105 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g--~gg--~~m~~~g~~~~~~~~~l~~~G~~~~l~-~~~~~~~~~ 105 (394)
|||+|=.+. +-|.+ ...+..+|++++.+ +-+.. .|+ +-++.-|++. ..+.-.|.. .++ ++-......
T Consensus 1 mkVwiDI~n-~~hvhfFk~lI~elekkG~e-v~iT~rd~~~v~~LLd~ygf~~----~~Igk~g~~-tl~~Kl~~~~eR~ 73 (346)
T COG1817 1 MKVWIDIGN-PPHVHFFKNLIWELEKKGHE-VLITCRDFGVVTELLDLYGFPY----KSIGKHGGV-TLKEKLLESAERV 73 (346)
T ss_pred CeEEEEcCC-cchhhHHHHHHHHHHhCCeE-EEEEEeecCcHHHHHHHhCCCe----EeecccCCc-cHHHHHHHHHHHH
Confidence 566665443 35666 68899999998654 44332 222 3344445542 222211211 111 222233445
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHH-HHhhhheeecCcc
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNL-AAFVDHILCILPN 184 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l-~~~~d~v~~~~p~ 184 (394)
..+.+++.+++||+.+..++|. ..+++..| ++|.+ .++.+.. +- -.|++ .++||.+++....
T Consensus 74 ~~L~ki~~~~kpdv~i~~~s~~-l~rvafgL---------g~psI-i~~D~eh-A~-----~qnkl~~Pla~~ii~P~~~ 136 (346)
T COG1817 74 YKLSKIIAEFKPDVAIGKHSPE-LPRVAFGL---------GIPSI-IFVDNEH-AE-----AQNKLTLPLADVIITPEAI 136 (346)
T ss_pred HHHHHHHhhcCCceEeecCCcc-hhhHHhhc---------CCceE-EecCChh-HH-----HHhhcchhhhhheeccccc
Confidence 5678899999999999877552 23343332 68864 3433211 11 23454 8899998877666
Q ss_pred cHHHHHhcCC-CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHH---HhhHHH
Q 016179 185 EEAICRLNGL-AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEV---ARMLPI 260 (394)
Q Consensus 185 ~~~~~~~~g~-~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei---~~~l~~ 260 (394)
....+...|. +..++|.+-..+..+... -...+++.+++|+.++.+.|++=|=|-++.. .+....
T Consensus 137 ~~~~~~~~G~~p~~i~~~~giae~~~v~~-----------f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~ 205 (346)
T COG1817 137 DEEELLDFGADPNKISGYNGIAELANVYG-----------FVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISV 205 (346)
T ss_pred chHHHHHhCCCccceecccceeEEeeccc-----------CCCCHHHHHHcCCCCCCceEEEeeccccceeeccccchhh
Confidence 6666666665 456677664433322110 0123578889999998888998777766521 111222
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcCCC
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLP 340 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P 340 (394)
+.+.++.|.+ .+ .++++. +.. .++..+++. ..+.+.. ..|--.++-.||++|+.+||+.-||+++|+|
T Consensus 206 ~~~li~~l~k-~g--iV~ipr--~~~----~~eife~~~--n~i~pk~-~vD~l~Llyya~lvig~ggTMarEaAlLGtp 273 (346)
T COG1817 206 LPDLIKELKK-YG--IVLIPR--EKE----QAEIFEGYR--NIIIPKK-AVDTLSLLYYATLVIGAGGTMAREAALLGTP 273 (346)
T ss_pred HHHHHHHHHh-Cc--EEEecC--chh----HHHHHhhhc--cccCCcc-cccHHHHHhhhheeecCCchHHHHHHHhCCc
Confidence 3345555543 22 333332 221 223334332 2222221 1233458889999999999999999999999
Q ss_pred EEEEEcC
Q 016179 341 CVVAYRA 347 (394)
Q Consensus 341 ~Iv~y~~ 347 (394)
+|.+|+.
T Consensus 274 aIs~~pG 280 (346)
T COG1817 274 AISCYPG 280 (346)
T ss_pred eEEecCC
Confidence 9999965
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-08 Score=108.44 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=81.8
Q ss_pred ChHHHHhhcCCCC---CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCC-cChHHHHHHHhhcCCC-
Q 016179 226 NSEDFKNKYSVPS---GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPN-RHVENYITGLIQKWPV- 300 (394)
Q Consensus 226 ~~~~~r~~lgl~~---~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~-~~~~~~l~~~~~~~~~- 300 (394)
.+..+++++|+++ +.|+|+++ ||-.+-|. +..+++++..+.+ +++++++++.+. ..+++.++.+...++.
T Consensus 762 nK~aLRkelGL~~~d~d~pLIg~V--GRL~~QKG-iDlLleA~~~Ll~--~dvqLVIvGdGp~~~~e~eL~~La~~l~l~ 836 (977)
T PLN02939 762 NKAALRKQLGLSSADASQPLVGCI--TRLVPQKG-VHLIRHAIYKTAE--LGGQFVLLGSSPVPHIQREFEGIADQFQSN 836 (977)
T ss_pred hhHHHHHHhCCCcccccceEEEEe--ecCCcccC-hHHHHHHHHHHhh--cCCEEEEEeCCCcHHHHHHHHHHHHHcCCC
Confidence 4667889999985 45777776 46554443 5678888887754 478998888652 2233445555454433
Q ss_pred -CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHH
Q 016179 301 -PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 301 -~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
++.++.++.....+.+|++||++|..| |.+.+|||++|+|.|+ .+++++.
T Consensus 837 drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVV-s~vGGL~ 892 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIV-RKTGGLN 892 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEE-ecCCCCc
Confidence 476664431122468999999999998 7788899999999886 5555543
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.2e-09 Score=104.36 Aligned_cols=154 Identities=14% Similarity=0.066 Sum_probs=96.4
Q ss_pred HHhhhheeecCcccHHHHHhc-CC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECC
Q 016179 172 AAFVDHILCILPNEEAICRLN-GL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPG 248 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~~-g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgG 248 (394)
.+.+|.+++.+++.++.+.+. +. ++.++-+|+.... +.+ ... ...++.++|+.+|
T Consensus 187 ~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~--~~~------------~~~-------~~~~~~~~il~vg- 244 (419)
T cd03806 187 GSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEE--LLK------------LPL-------DEKTRENQILSIA- 244 (419)
T ss_pred hhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHH--hcc------------ccc-------ccccCCcEEEEEE-
Confidence 567899999999999888664 33 4556656653211 110 000 0123445666653
Q ss_pred CcHHHHHhhHHHHHHHHHHhhhhCC-----CeEEEEEeCCCc----ChHHHHHHHhhcCCC--CEEEecCCCcchHHHHH
Q 016179 249 SRLQEVARMLPIFAKTVELLKDSFP-----ELITVIHVAPNR----HVENYITGLIQKWPV--PSILVPGGSSNLKYDAF 317 (394)
Q Consensus 249 Srg~ei~~~l~~ll~a~~~l~~~~~-----~~~~vi~~g~~~----~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~ 317 (394)
|-.. ++.+..+++++..+.+..| ++++++++++.. .+.+.++++.++.++ +++++.....+++.++|
T Consensus 245 -r~~~-~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l 322 (419)
T cd03806 245 -QFRP-EKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEEL 322 (419)
T ss_pred -eecC-CCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHH
Confidence 3222 3345678899998876654 489888886421 123445555554443 47666332247899999
Q ss_pred HHcccceehh-----hHHHHHHHHcCCCEEEEEcCCh
Q 016179 318 SASRVALCTS-----GTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 318 ~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
+.||++|..| |-+.+|+|++|+|+|...-.++
T Consensus 323 ~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp 359 (419)
T cd03806 323 STASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP 359 (419)
T ss_pred HhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCC
Confidence 9999999877 6666799999999886433343
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.2e-09 Score=106.73 Aligned_cols=118 Identities=11% Similarity=0.130 Sum_probs=82.9
Q ss_pred hHHHHhhcCCCC--CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVPS--GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~~--~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|++. +.++|+.+ +|-.+.| .+..+++++..+.+ +++++++++.+...+++.++++..+++.++.+
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~v--gRl~~~K-G~d~li~a~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~ 366 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVI--INFDDFQ-GAELLAESLEKLVE--LDIQLVICGSGDKEYEKRFQDFAEEHPEQVSV 366 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEe--ccccccC-cHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEE
Confidence 456778899974 45666665 3443333 36778899988865 47999998876433445566666655556777
Q ss_pred ecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChH
Q 016179 305 VPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
..++..++++.+|++||+++..| |.+.+|||++|+|.|+ ..++++
T Consensus 367 ~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv-~~~GGl 416 (489)
T PRK14098 367 QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVA-YAGGGI 416 (489)
T ss_pred EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEE-ecCCCC
Confidence 65543345789999999999998 7777899999999886 444433
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.2e-09 Score=107.49 Aligned_cols=157 Identities=12% Similarity=0.133 Sum_probs=105.8
Q ss_pred HHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECC
Q 016179 172 AAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPG 248 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgG 248 (394)
.+.+|.+++.++..++.+.+.|++ +.++.|++..... .+ ... ...+++.++|+.+ |
T Consensus 242 ~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f--~~------------~~~------~~~~~~~~~i~~v-G 300 (475)
T cd03813 242 YQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERF--AP------------ARR------ARPEKEPPVVGLI-G 300 (475)
T ss_pred HHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHc--CC------------ccc------cccCCCCcEEEEE-e
Confidence 567999999999888877777764 5677777644321 11 000 0123455666665 3
Q ss_pred CcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc--ChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccce
Q 016179 249 SRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR--HVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVAL 324 (394)
Q Consensus 249 Srg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~--~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I 324 (394)
.-. ..+. +..++++++.+.++.|++++++++++.. .+.+.+++..++.++ ++++. | .+++.++|+.||++|
T Consensus 301 rl~-~~Kg-~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~-G--~~~v~~~l~~aDv~v 375 (475)
T cd03813 301 RVV-PIKD-IKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFT-G--FQNVKEYLPKLDVLV 375 (475)
T ss_pred ccc-cccC-HHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEc-C--CccHHHHHHhCCEEE
Confidence 332 3443 6778899999888788999998876522 233444555555443 56666 4 468999999999999
Q ss_pred ehh-----hHHHHHHHHcCCCEEEEEcCChHHHHHH
Q 016179 325 CTS-----GTVAVELQLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 325 ~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a 355 (394)
..| |.+.+||+++|+|+|. .+.+.....+.
T Consensus 376 lpS~~Eg~p~~vlEAma~G~PVVa-td~g~~~elv~ 410 (475)
T cd03813 376 LTSISEGQPLVILEAMAAGIPVVA-TDVGSCRELIE 410 (475)
T ss_pred eCchhhcCChHHHHHHHcCCCEEE-CCCCChHHHhc
Confidence 988 5566799999999886 56666655543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.4e-10 Score=97.57 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=65.9
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHH-HHHHHHhccccCCCCCe---EEEee-cCccccccCcchHHHHHHHhhhhee
Q 016179 105 LKETIEAALLFRPHAVVTVDSKGFSFRL-LKQLRARYSHERLNGPA---HFHYV-APSFWAWKGGEARLKNLAAFVDHIL 179 (394)
Q Consensus 105 ~~~~~~~i~~~~PD~Vi~~~~~~f~~~l-a~~l~~~~~~~~~~ip~---~~~yv-~~~~wa~~~g~~r~~~l~~~~d~v~ 179 (394)
.+++.++|++++||+||+| +| |+..+ ...+++++.. .++|+ ++||. .|..|.++ .+|+++
T Consensus 78 ~~~l~~~l~~~~PD~IIsT-hp-~~~~~~l~~lk~~~~~--~~~p~~tvvTD~~~~H~~W~~~-----------~~D~y~ 142 (169)
T PF06925_consen 78 ARRLIRLLREFQPDLIIST-HP-FPAQVPLSRLKRRGRL--PNIPVVTVVTDFDTVHPFWIHP-----------GVDRYF 142 (169)
T ss_pred HHHHHHHHhhcCCCEEEEC-Cc-chhhhHHHHHHHhhcc--cCCcEEEEEcCCCCCCcCeecC-----------CCCEEE
Confidence 4578899999999999998 44 55566 6667666432 14563 67885 58889774 499999
Q ss_pred ecCcccHHHHHhcCCC---eEEEcCCC
Q 016179 180 CILPNEEAICRLNGLA---ATFVGHPV 203 (394)
Q Consensus 180 ~~~p~~~~~~~~~g~~---~~~vG~Pv 203 (394)
|.+++.++.+.++|++ +.++|+|+
T Consensus 143 Vase~~~~~l~~~Gi~~~~I~vtGiPV 169 (169)
T PF06925_consen 143 VASEEVKEELIERGIPPERIHVTGIPV 169 (169)
T ss_pred ECCHHHHHHHHHcCCChhHEEEeCccC
Confidence 9999999999999987 88999996
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-07 Score=97.26 Aligned_cols=152 Identities=9% Similarity=-0.039 Sum_probs=95.2
Q ss_pred HhhhheeecCcccHHHHHhc-CC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC
Q 016179 173 AFVDHILCILPNEEAICRLN-GL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS 249 (394)
Q Consensus 173 ~~~d~v~~~~p~~~~~~~~~-g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS 249 (394)
+.+|.+++.+++.++.+.+. +. ++.++-+|+.... +.. .. ..-+++.+.++.+|
T Consensus 219 ~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~--~~~------------~~-------~~~~~~~~~il~vG-- 275 (463)
T PLN02949 219 RCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSG--LQA------------LP-------LERSEDPPYIISVA-- 275 (463)
T ss_pred CCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHH--ccc------------CC-------ccccCCCCEEEEEE--
Confidence 56899999999999887663 33 3455666653211 100 00 00123345666653
Q ss_pred cHHHHHhhHHHHHHHHHHhhhh----CCCeEEEEEeCCC----cChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHH
Q 016179 250 RLQEVARMLPIFAKTVELLKDS----FPELITVIHVAPN----RHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSA 319 (394)
Q Consensus 250 rg~ei~~~l~~ll~a~~~l~~~----~~~~~~vi~~g~~----~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ 319 (394)
|-.. ++....+++++..+.++ .++++++++++.. .++.+.+++...+.++ ++.++.....+++.++|+.
T Consensus 276 R~~~-~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~ 354 (463)
T PLN02949 276 QFRP-EKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGG 354 (463)
T ss_pred eeec-cCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHh
Confidence 3322 34567888888876542 3678998888742 1122335555555443 4766633224689999999
Q ss_pred cccceehh-----hHHHHHHHHcCCCEEEEEcCC
Q 016179 320 SRVALCTS-----GTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 320 ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~ 348 (394)
||++|-.| |.+.+|||++|+|+|.....+
T Consensus 355 a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gG 388 (463)
T PLN02949 355 AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAG 388 (463)
T ss_pred CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCC
Confidence 99999877 777789999999988765444
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.9e-08 Score=99.96 Aligned_cols=146 Identities=7% Similarity=-0.024 Sum_probs=85.1
Q ss_pred hhheeecCcccHHHHHhc-C-CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH
Q 016179 175 VDHILCILPNEEAICRLN-G-LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ 252 (394)
Q Consensus 175 ~d~v~~~~p~~~~~~~~~-g-~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ 252 (394)
++.+++.+...++.+.+. + .++.++.|++......+.+ .....+ .++++++|+.++.-...
T Consensus 191 ~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~~~~-------------~~~~~~----~~~~~~~il~v~~~~~~ 253 (405)
T PRK10125 191 GCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILA-------------ELPPVR----ETQGKPKIAVVAHDLRY 253 (405)
T ss_pred CcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccccccc-------------cccccc----cCCCCCEEEEEEecccc
Confidence 467788888877766542 3 3467777776422111100 001111 13456667665421111
Q ss_pred HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC--cchHHHHHHHcccceehh---
Q 016179 253 EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS--SNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 253 ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~--~~~~~~~~~~ADl~I~~S--- 327 (394)
+- +....+++++..+. +++++++++.+... . . .++..+ |+. ..++.++|++||++|..|
T Consensus 254 ~~-Kg~~~li~A~~~l~---~~~~L~ivG~g~~~--~--~-------~~v~~~-g~~~~~~~l~~~y~~aDvfV~pS~~E 317 (405)
T PRK10125 254 DG-KTDQQLVREMMALG---DKIELHTFGKFSPF--T--A-------GNVVNH-GFETDKRKLMSALNQMDALVFSSRVD 317 (405)
T ss_pred CC-ccHHHHHHHHHhCC---CCeEEEEEcCCCcc--c--c-------cceEEe-cCcCCHHHHHHHHHhCCEEEECCccc
Confidence 11 23456778877653 46888887754221 1 0 123333 221 356889999999999999
Q ss_pred --hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 --GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 --Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+|||+||+|+|. ++.+.+...+
T Consensus 318 gfp~vilEAmA~G~PVVa-t~~gG~~Eiv 345 (405)
T PRK10125 318 NYPLILCEALSIGVPVIA-THSDAAREVL 345 (405)
T ss_pred cCcCHHHHHHHcCCCEEE-eCCCChHHhE
Confidence 6677899999999875 6777776655
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.3e-08 Score=97.57 Aligned_cols=170 Identities=9% Similarity=0.037 Sum_probs=90.6
Q ss_pred HHHhhhheeecCcccH-HHHHhc-CC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChH---HHHhhcCCCCCCcE
Q 016179 171 LAAFVDHILCILPNEE-AICRLN-GL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSE---DFKNKYSVPSGATV 242 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~-~~~~~~-g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~---~~r~~lgl~~~~~~ 242 (394)
..+.+|.+++.++.+. +.+..+ ++ ++.++.|-+..+. |.+... ..... ..+++++.+++.++
T Consensus 181 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~--f~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
T TIGR02472 181 TLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSR--FYPPQS--------SEETSEIDNLLAPFLKDPEKPP 250 (439)
T ss_pred HHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhh--cCCCCc--------cccchhHHHHHHhhccccCCcE
Confidence 4667899998876543 333332 33 3556655553321 211000 00111 12234556666776
Q ss_pred EEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC---hHH-------HHHHHhhcCCC--CEEEecCCCc
Q 016179 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH---VEN-------YITGLIQKWPV--PSILVPGGSS 310 (394)
Q Consensus 243 IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~---~~~-------~l~~~~~~~~~--~v~~~~g~~~ 310 (394)
|+.+ | |-.+.| .+..+++|++.+.+..++.++++++|+..+ +++ .+.+...+.++ ++.+......
T Consensus 251 i~~v-G-rl~~~K-g~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~ 327 (439)
T TIGR02472 251 ILAI-S-RPDRRK-NIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRP 327 (439)
T ss_pred EEEE-c-CCcccC-CHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCH
Confidence 6666 3 443333 467888998764221122334333443221 111 11222333332 4555422115
Q ss_pred chHHHHHHHc----ccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 311 NLKYDAFSAS----RVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 311 ~~~~~~~~~A----Dl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++++++|+.| |++|..| |.+.+|||+||+|+|. ...+.....+
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~-s~~gg~~eiv 379 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVA-TDDGGPRDII 379 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEE-eCCCCcHHHh
Confidence 7899999987 8999988 5666799999999876 5666666555
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.4e-07 Score=97.41 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=73.2
Q ss_pred hcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh--CCCeEEEEEeCCCcCh----------HHHHHHHhhcCCC
Q 016179 233 KYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS--FPELITVIHVAPNRHV----------ENYITGLIQKWPV 300 (394)
Q Consensus 233 ~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~--~~~~~~vi~~g~~~~~----------~~~l~~~~~~~~~ 300 (394)
++..++++|+|+.+ +|-..- +.+..+++|+..+.+. .+++.+ +++++ ... ...+..+..++++
T Consensus 472 r~~~~pdkpvIL~V--GRL~p~-KGi~~LIeAf~~L~~l~~~~nL~L-IiG~g-dd~d~l~~~~~~~l~~L~~li~~lgL 546 (1050)
T TIGR02468 472 RFFTNPRKPMILAL--ARPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNR-DDIDEMSSGSSSVLTSVLKLIDKYDL 546 (1050)
T ss_pred hhcccCCCcEEEEE--cCCccc-cCHHHHHHHHHHhHhhccCCCEEE-EEecC-chhhhhhccchHHHHHHHHHHHHhCC
Confidence 34457788888887 455443 4467889999988643 245653 33332 111 1123334444443
Q ss_pred --CEEEecCCC-cchHHHHHHHc----ccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 301 --PSILVPGGS-SNLKYDAFSAS----RVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 301 --~v~~~~g~~-~~~~~~~~~~A----Dl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+|.+. |+. .++++++|+.| |++|..| |.+.+|||+||+|+|. ++.++....+
T Consensus 547 ~g~V~Fl-G~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVA-SdvGG~~EII 610 (1050)
T TIGR02468 547 YGQVAYP-KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVA-TKNGGPVDIH 610 (1050)
T ss_pred CCeEEec-CCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEE-eCCCCcHHHh
Confidence 35544 432 46899999988 6999988 7777899999999876 5666655554
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-07 Score=93.54 Aligned_cols=149 Identities=15% Similarity=0.095 Sum_probs=89.7
Q ss_pred HHHhhhheeecCcccHHHHHhcC----CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 171 LAAFVDHILCILPNEEAICRLNG----LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~g----~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
+.+.+|.+++.++.+++.+.+.+ .++.++.|.+..+.. .+ ... ....++++.++|+.+
T Consensus 169 ~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f--~~------------~~~----~~~~~~~~~~~ilf~ 230 (397)
T TIGR03087 169 IAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFF--SP------------DRD----YPNPYPPGKRVLVFT 230 (397)
T ss_pred HHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhc--CC------------Ccc----ccCCCCCCCcEEEEE
Confidence 46789999999999998886542 246677666643321 11 000 011123455666665
Q ss_pred CCCcHH--HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccce
Q 016179 247 PGSRLQ--EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVAL 324 (394)
Q Consensus 247 gGSrg~--ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I 324 (394)
|+... .+..++..+.+++..+.++.|++++++++++.. +.+++... ..++.+. |+ .+++..+|+.||++|
T Consensus 231 -G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~--~~~V~~~-G~-v~~~~~~~~~adv~v 302 (397)
T TIGR03087 231 -GAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAA--LPGVTVT-GS-VADVRPYLAHAAVAV 302 (397)
T ss_pred -EecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhcc--CCCeEEe-ee-cCCHHHHHHhCCEEE
Confidence 44432 122222222245666666678999988876532 22333322 1257666 44 478999999999999
Q ss_pred ehh----hH--HHHHHHHcCCCEEEEE
Q 016179 325 CTS----GT--VAVELQLARLPCVVAY 345 (394)
Q Consensus 325 ~~S----Gt--~tlEa~a~G~P~Iv~y 345 (394)
..| |. ..+|||++|+|+|...
T Consensus 303 ~Ps~~~eG~~~~~lEAma~G~PVV~t~ 329 (397)
T TIGR03087 303 APLRIARGIQNKVLEAMAMAKPVVASP 329 (397)
T ss_pred ecccccCCcccHHHHHHHcCCCEEecC
Confidence 765 32 3569999999988753
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.7e-07 Score=90.39 Aligned_cols=142 Identities=17% Similarity=0.068 Sum_probs=89.0
Q ss_pred HHhhhheeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 172 AAFVDHILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
.+.+|.+++.++..++.+.+ .+.+..++-+|+..... .. . +...+.++.+ |..
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~--~~-------------~----------~~~~~~il~~-G~~ 204 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRF--TP-------------A----------EEKEDYYLSV-GRL 204 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhc--Cc-------------C----------CCCCCEEEEE-EcC
Confidence 46789999999999888854 35566677666533211 10 0 0123445444 444
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh---
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S--- 327 (394)
. ..+ ....++++++.+ + .++++++.+. . .+.+++ ....++.++.....+++.++|++||+++..|
T Consensus 205 ~-~~K-~~~~li~a~~~~----~-~~l~ivG~g~-~-~~~l~~---~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~ 272 (351)
T cd03804 205 V-PYK-RIDLAIEAFNKL----G-KRLVVIGDGP-E-LDRLRA---KAGPNVTFLGRVSDEELRDLYARARAFLFPAEED 272 (351)
T ss_pred c-ccc-ChHHHHHHHHHC----C-CcEEEEECCh-h-HHHHHh---hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCC
Confidence 3 233 356788887765 3 6788877653 2 233433 2233677764321345999999999999877
Q ss_pred -hHHHHHHHHcCCCEEEEEcCChHHH
Q 016179 328 -GTVAVELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 328 -Gt~tlEa~a~G~P~Iv~y~~~~~~~ 352 (394)
|.+.+|+|++|+|+|.. ..+....
T Consensus 273 ~g~~~~Eama~G~Pvi~~-~~~~~~e 297 (351)
T cd03804 273 FGIVPVEAMASGTPVIAY-GKGGALE 297 (351)
T ss_pred CCchHHHHHHcCCCEEEe-CCCCCcc
Confidence 67778999999998864 4444443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.9e-06 Score=81.95 Aligned_cols=275 Identities=13% Similarity=0.101 Sum_probs=152.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEec-Ch---hhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVG-GS---MMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~g-g~---~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
--|.|=|.+-|.=+-+..|+++|+++.|+ +.++-.. .+ +..++-+.. ........+ +. ...
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~~P~-~~ilvTt~T~Tg~e~a~~~~~~---~v~h~YlP~-D~----------~~~ 114 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRERFPD-LRILVTTMTPTGAERAAALFGD---SVIHQYLPL-DL----------PIA 114 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHhCCC-CCEEEEecCccHHHHHHHHcCC---CeEEEecCc-Cc----------hHH
Confidence 34667666664444477899999999996 6654332 22 221111111 000001111 11 011
Q ss_pred HHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEee-----cCccccccCcchHHHHHHHhhhheeecC
Q 016179 108 TIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYV-----APSFWAWKGGEARLKNLAAFVDHILCIL 182 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv-----~~~~wa~~~g~~r~~~l~~~~d~v~~~~ 182 (394)
..+.++.++||++|.+-..-.|. +.-.++++ ++|.++-.- +-.-|..... ..+.+.+..|.+++-+
T Consensus 115 v~rFl~~~~P~l~Ii~EtElWPn-li~e~~~~------~~p~~LvNaRLS~rS~~~y~k~~~--~~~~~~~~i~li~aQs 185 (419)
T COG1519 115 VRRFLRKWRPKLLIIMETELWPN-LINELKRR------GIPLVLVNARLSDRSFARYAKLKF--LARLLFKNIDLILAQS 185 (419)
T ss_pred HHHHHHhcCCCEEEEEeccccHH-HHHHHHHc------CCCEEEEeeeechhhhHHHHHHHH--HHHHHHHhcceeeecC
Confidence 34667789999999885422232 23345444 789643210 1111333221 2344677789999999
Q ss_pred cccHHHHHhcCCC-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHH
Q 016179 183 PNEEAICRLNGLA-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIF 261 (394)
Q Consensus 183 p~~~~~~~~~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~l 261 (394)
+..++.|.+-|.+ +.++||-=.|.-.. +. .....+..|.+++.+ ++++....-..| |- ...
T Consensus 186 e~D~~Rf~~LGa~~v~v~GNlKfd~~~~--~~---------~~~~~~~~r~~l~~~--r~v~iaaSTH~G-Ee----ei~ 247 (419)
T COG1519 186 EEDAQRFRSLGAKPVVVTGNLKFDIEPP--PQ---------LAAELAALRRQLGGH--RPVWVAASTHEG-EE----EII 247 (419)
T ss_pred HHHHHHHHhcCCcceEEecceeecCCCC--hh---------hHHHHHHHHHhcCCC--CceEEEecCCCc-hH----HHH
Confidence 9999999999985 78899842221100 00 001234566666543 566655433333 32 246
Q ss_pred HHHHHHhhhhCCCeEEEEE-eCCCcChHHHHHHHhhcCCC---------------CEEEecCCCcchHHHHHHHccccee
Q 016179 262 AKTVELLKDSFPELITVIH-VAPNRHVENYITGLIQKWPV---------------PSILVPGGSSNLKYDAFSASRVALC 325 (394)
Q Consensus 262 l~a~~~l~~~~~~~~~vi~-~g~~~~~~~~l~~~~~~~~~---------------~v~~~~g~~~~~~~~~~~~ADl~I~ 325 (394)
+++.+.|.+++|++.++++ -++ +.. +.+++.++..++ ++.+.+- --+|..+|+.||++..
T Consensus 248 l~~~~~l~~~~~~~llIlVPRHp-ERf-~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt--mGEL~l~y~~adiAFV 323 (419)
T COG1519 248 LDAHQALKKQFPNLLLILVPRHP-ERF-KAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT--MGELGLLYGIADIAFV 323 (419)
T ss_pred HHHHHHHHhhCCCceEEEecCCh-hhH-HHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec--HhHHHHHHhhccEEEE
Confidence 6788888888888765544 332 222 334554443322 2333322 2478899999998765
Q ss_pred -h----hhHHH-HHHHHcCCCEEEEEcCChHHH
Q 016179 326 -T----SGTVA-VELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 326 -~----SGt~t-lEa~a~G~P~Iv~y~~~~~~~ 352 (394)
- -|+=. +|.+++|+|+|.-.-+..++.
T Consensus 324 GGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e 356 (419)
T COG1519 324 GGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD 356 (419)
T ss_pred CCcccCCCCCChhhHHHcCCCEEeCCccccHHH
Confidence 2 25544 599999999887544444443
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.4e-06 Score=90.43 Aligned_cols=120 Identities=15% Similarity=0.086 Sum_probs=76.8
Q ss_pred HhhcCC--CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCC-Cc----ChH-----HHHHHHhhcC
Q 016179 231 KNKYSV--PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAP-NR----HVE-----NYITGLIQKW 298 (394)
Q Consensus 231 r~~lgl--~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~-~~----~~~-----~~l~~~~~~~ 298 (394)
++.+|+ ++++|+|+.+ +|-...| .+..+++++..+.+..+++++++++++ .. +.+ +.+.+...++
T Consensus 562 ~e~lg~l~~~~kpvIl~V--GRL~~~K-Gid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~l 638 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSM--ARLDRVK-NLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKY 638 (815)
T ss_pred HHHhCCccCCCCcEEEEE--ecCcccC-CHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHc
Confidence 345676 4566777776 4655444 467788999887665667999988875 11 111 1233344444
Q ss_pred CC--CEEEecCCC----cchHHHHHH-Hcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 299 PV--PSILVPGGS----SNLKYDAFS-ASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 299 ~~--~v~~~~g~~----~~~~~~~~~-~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++ ++.++.... ..+++.+++ ++|++|..| |.+.+|||+||+|+|. ++.++....+
T Consensus 639 gL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVA-TdvGG~~EIV 705 (815)
T PLN00142 639 NLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFA-TCQGGPAEII 705 (815)
T ss_pred CCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEE-cCCCCHHHHh
Confidence 43 466543210 135666666 479999988 7777899999999875 6666666655
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3e-06 Score=90.71 Aligned_cols=121 Identities=14% Similarity=0.128 Sum_probs=76.4
Q ss_pred HHHhhcCC--CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc-------C---hHHHHHHHhh
Q 016179 229 DFKNKYSV--PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR-------H---VENYITGLIQ 296 (394)
Q Consensus 229 ~~r~~lgl--~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~-------~---~~~~l~~~~~ 296 (394)
+.++.+|+ ++++|+|+.+ +|-.+.|. +..+++++..+....++.++++++|+.. + ..+.+.+...
T Consensus 537 ~~~~~~G~l~d~~kpiIl~V--GRL~~~KG-id~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~ 613 (784)
T TIGR02470 537 DNDEHYGYLKDPNKPIIFSM--ARLDRVKN-LTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLID 613 (784)
T ss_pred hHHHHhCCCCCCCCcEEEEE--eCCCccCC-HHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHH
Confidence 33466776 5678888877 56655554 6778888877654445688888887531 0 1122333444
Q ss_pred cCCC--CEEEecCCC--cchHHHHHH----Hcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 297 KWPV--PSILVPGGS--SNLKYDAFS----ASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 297 ~~~~--~v~~~~g~~--~~~~~~~~~----~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++++ ++.++ |+. ..+..++++ ++|++|..| |-+.+|||+||+|+|. .+.+++...+
T Consensus 614 ~~gL~g~V~fl-G~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVA-T~~GG~~EiV 682 (784)
T TIGR02470 614 QYQLHGQIRWI-GAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFA-TRFGGPLEII 682 (784)
T ss_pred HhCCCCeEEEc-cCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEE-cCCCCHHHHh
Confidence 4443 46655 321 234445554 357999988 7777899999999875 6666666655
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=83.76 Aligned_cols=151 Identities=15% Similarity=0.164 Sum_probs=93.0
Q ss_pred hhheeecCcccHHHHHhcCCCeE---EEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCC-CCCcEEEEECCCc
Q 016179 175 VDHILCILPNEEAICRLNGLAAT---FVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVP-SGATVISLLPGSR 250 (394)
Q Consensus 175 ~d~v~~~~p~~~~~~~~~g~~~~---~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~-~~~~~IlllgGSr 250 (394)
-+.+++.+++.++.+.+.|++.. +.|. | +..|.+. ....++.+++++.+ ++.++++.+ ||
T Consensus 93 ~~~vIavS~~t~~~L~~~G~~~~i~I~~GV---D-~~~f~p~----------~~~~~~~r~~~~~~~~~~~~i~~v--GR 156 (335)
T PHA01633 93 DVKFIPNSKFSAENLQEVGLQVDLPVFHGI---N-FKIVENA----------EKLVPQLKQKLDKDFPDTIKFGIV--SG 156 (335)
T ss_pred CCEEEeCCHHHHHHHHHhCCCCceeeeCCC---C-hhhcCcc----------chhhHHHHHHhCcCCCCCeEEEEE--eC
Confidence 45788899999998888777522 2232 2 1112110 01124566666654 355566666 34
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCCcChHHHHHHHhhcCCCCEEEec--CCC-cchHHHHHHHcccc
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPNRHVENYITGLIQKWPVPSILVP--GGS-SNLKYDAFSASRVA 323 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~--g~~-~~~~~~~~~~ADl~ 323 (394)
..+- +....++++++.+.++.|+ +++++++. . .+++. ....+++++. |+. .+++.++|++||++
T Consensus 157 l~~~-KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--~----~~~~l--~l~~~V~f~g~~G~~~~~dl~~~y~~aDif 227 (335)
T PHA01633 157 LTKR-KNMDLMLQVFNELNTKYPDIAKKIHFFVISH--K----QFTQL--EVPANVHFVAEFGHNSREYIFAFYGAMDFT 227 (335)
T ss_pred Cccc-cCHHHHHHHHHHHHHhCCCccccEEEEEEcH--H----HHHHc--CCCCcEEEEecCCCCCHHHHHHHHHhCCEE
Confidence 4433 3467899999998876664 46665532 1 12221 1223576653 221 46799999999999
Q ss_pred eehh-----hHHHHHHHHcCCCEEEEEcCChHH
Q 016179 324 LCTS-----GTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 324 I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
|..| |.+.+||+++|+|+|. ...+++.
T Consensus 228 V~PS~~EgfGlvlLEAMA~G~PVVa-s~~~~l~ 259 (335)
T PHA01633 228 IVPSGTEGFGMPVLESMAMGTPVIH-QLMPPLD 259 (335)
T ss_pred EECCccccCCHHHHHHHHcCCCEEE-ccCCCce
Confidence 9998 6677799999999775 5655544
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.5e-07 Score=87.28 Aligned_cols=148 Identities=13% Similarity=0.104 Sum_probs=94.0
Q ss_pred HHhhhheeecCcccHHHHHhcCC----CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEEC
Q 016179 172 AAFVDHILCILPNEEAICRLNGL----AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLP 247 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~~g~----~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illlg 247 (394)
.+.+|.+++.++..++.+.+.|+ ++.++-|++..+.. .+ ... +.+.+.++.++
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f--~~------------~~~---------~~~~~~vl~~~ 148 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMF--EY------------KPK---------EKPHPCVLAIL 148 (331)
T ss_pred hccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHc--CC------------Ccc---------ccCCCEEEEEe
Confidence 56799999999999998877664 35666666643321 11 000 11234566666
Q ss_pred CCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh
Q 016179 248 GSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327 (394)
Q Consensus 248 GSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S 327 (394)
|... + .+.+..++++++.+.++.+++++++++++..+ ..+ .........++ .+++.++|+.||+++..|
T Consensus 149 g~~~-~-~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l----~~~~~~~~~v~---~~~l~~~y~~aDv~v~pS 217 (331)
T PHA01630 149 PHSW-D-RKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRL----FGLNGVKTPLP---DDDIYSLFAGCDILFYPV 217 (331)
T ss_pred cccc-c-cCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhh----ccccceeccCC---HHHHHHHHHhCCEEEECC
Confidence 5443 2 23567899999998877778998888753221 111 11110000122 478999999999999988
Q ss_pred -----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 -----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 -----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+|||+||+|+|.. ..++....+
T Consensus 218 ~~E~fgl~~lEAMA~G~PVIas-~~gg~~E~i 248 (331)
T PHA01630 218 RGGAFEIPVIEALALGLDVVVT-EKGAWSEWV 248 (331)
T ss_pred ccccCChHHHHHHHcCCCEEEe-CCCCchhhc
Confidence 55656999999998875 455554444
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-06 Score=89.35 Aligned_cols=150 Identities=15% Similarity=0.101 Sum_probs=94.9
Q ss_pred HHhhhheeecCcccHHHHHh----cCC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEE
Q 016179 172 AAFVDHILCILPNEEAICRL----NGL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVIS 244 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~----~g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Il 244 (394)
.+.+|.+++.+++.++.+.+ ++. ++.++.+.+.+.+.. ... ..+..+|+
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~-----------------~~~-------~r~~~~il 323 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQY-----------------PEQ-------ERKPFSII 323 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccC-----------------ccc-------ccCCeEEE
Confidence 55689999999987766543 221 244554433222110 000 11223444
Q ss_pred EECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHccc
Q 016179 245 LLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRV 322 (394)
Q Consensus 245 llgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl 322 (394)
.+ | |-.+.| .+..+++|+..+.++.|++++++++.+. . .+.+++.+++.+. .+.+. |+ .++.++++.||+
T Consensus 324 ~v-G-rl~~~K-g~~~li~A~~~l~~~~p~~~l~i~G~G~-~-~~~l~~~i~~~~l~~~V~f~-G~--~~~~~~~~~adv 395 (500)
T TIGR02918 324 TA-S-RLAKEK-HIDWLVKAVVKAKKSVPELTFDIYGEGG-E-KQKLQKIINENQAQDYIHLK-GH--RNLSEVYKDYEL 395 (500)
T ss_pred EE-e-cccccc-CHHHHHHHHHHHHhhCCCeEEEEEECch-h-HHHHHHHHHHcCCCCeEEEc-CC--CCHHHHHHhCCE
Confidence 44 4 444444 4678999999998888999988887653 2 3456666655443 35544 54 479999999999
Q ss_pred ceehh-----hHHHHHHHHcCCCEEEEEcCC-hHHHHH
Q 016179 323 ALCTS-----GTVAVELQLARLPCVVAYRAH-FLTEWF 354 (394)
Q Consensus 323 ~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~-~~~~~~ 354 (394)
+|..| |.+.+||++||+|+|. +..+ +....+
T Consensus 396 ~v~pS~~Egfgl~~lEAma~G~PVI~-~dv~~G~~eiI 432 (500)
T TIGR02918 396 YLSASTSEGFGLTLMEAVGSGLGMIG-FDVNYGNPTFI 432 (500)
T ss_pred EEEcCccccccHHHHHHHHhCCCEEE-ecCCCCCHHHc
Confidence 99999 5666799999999886 5543 444444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-05 Score=72.72 Aligned_cols=85 Identities=25% Similarity=0.280 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhh--cCCCCEEEecCC-CcchHHHHHHHcccceehh-----hH
Q 016179 258 LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQ--KWPVPSILVPGG-SSNLKYDAFSASRVALCTS-----GT 329 (394)
Q Consensus 258 l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~--~~~~~v~~~~g~-~~~~~~~~~~~ADl~I~~S-----Gt 329 (394)
...+++++..+.++.+++++++++..... ...+.... ....++.++... ..++...+++.||++++.| |+
T Consensus 119 ~~~~~~a~~~l~~~~~~~~~~i~G~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~ 196 (229)
T cd01635 119 LDDLIEAFALLKERGPDLKLVIAGDGPER--EYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGL 196 (229)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEeCCCCh--HHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcCh
Confidence 45677888888877789999998876432 22222111 222357766442 1355666777799999999 66
Q ss_pred HHHHHHHcCCCEEEE
Q 016179 330 VAVELQLARLPCVVA 344 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~ 344 (394)
..+|++++|+|+|..
T Consensus 197 ~~~Eam~~g~pvi~s 211 (229)
T cd01635 197 VVLEAMACGLPVIAT 211 (229)
T ss_pred HHHHHHhCCCCEEEc
Confidence 667999999998864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-06 Score=87.09 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=69.0
Q ss_pred CCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHH
Q 016179 236 VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYD 315 (394)
Q Consensus 236 l~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 315 (394)
++.|+|+|.+.=||-+.. .+++..+++++..+ +.++++.+++ .+ ... .....++.+... -...+
T Consensus 233 ~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l-----~~~vi~~~~~-~~--~~~----~~~p~n~~v~~~---~p~~~ 296 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA-VELLAIVLEALADL-----DVRVIVSLGG-AR--DTL----VNVPDNVIVADY---VPQLE 296 (406)
T ss_pred hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcC-----CcEEEEeccc-cc--ccc----ccCCCceEEecC---CCHHH
Confidence 567889999987887743 33344455554443 5778887775 22 111 122335655532 25678
Q ss_pred HHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 316 AFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 316 ~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
++..||++|+=.|..|+ ||+.+|+|+|++ +...--+..|+++.
T Consensus 297 ~l~~ad~vI~hGG~gtt~eaL~~gvP~vv~-P~~~DQ~~nA~rve 340 (406)
T COG1819 297 LLPRADAVIHHGGAGTTSEALYAGVPLVVI-PDGADQPLNAERVE 340 (406)
T ss_pred HhhhcCEEEecCCcchHHHHHHcCCCEEEe-cCCcchhHHHHHHH
Confidence 99999999999998777 999999999974 54433333355443
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-05 Score=72.96 Aligned_cols=198 Identities=15% Similarity=0.175 Sum_probs=108.5
Q ss_pred HhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHHhc
Q 016179 113 LLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLN 192 (394)
Q Consensus 113 ~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~~ 192 (394)
.+.+||++|+.|.- ...++-.+|+++. + +.+++-..|.+ |+ +..|.+++..-+-.+.....
T Consensus 67 p~~~Pdl~I~aGrr--ta~l~~~lkk~~~----~-~~vVqI~~Prl----p~--------~~fDlvivp~HD~~~~~s~~ 127 (329)
T COG3660 67 PEQRPDLIITAGRR--TAPLAFYLKKKFG----G-IKVVQIQDPRL----PY--------NHFDLVIVPYHDWREELSDQ 127 (329)
T ss_pred ccCCCceEEecccc--hhHHHHHHHHhcC----C-ceEEEeeCCCC----Cc--------ccceEEeccchhhhhhhhcc
Confidence 34579999988742 4556667777653 4 44678666664 22 14688776654433332223
Q ss_pred CCCe-EEEc--CCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH-HH-HhhHHHHHHHHHH
Q 016179 193 GLAA-TFVG--HPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ-EV-ARMLPIFAKTVEL 267 (394)
Q Consensus 193 g~~~-~~vG--~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~-ei-~~~l~~ll~a~~~ 267 (394)
|-++ ..+| |++-+.+.. ..++.++..+.+ +...+-+++||+-++ .. .+-.-.+...+.+
T Consensus 128 ~~Nilpi~Gs~h~Vt~~~lA---------------a~~e~~~~~~p~-~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k 191 (329)
T COG3660 128 GPNILPINGSPHNVTSQRLA---------------ALREAFKHLLPL-PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVK 191 (329)
T ss_pred CCceeeccCCCCcccHHHhh---------------hhHHHHHhhCCC-CCceEEEEecCCCCCCccCHHHHHHHHHHHHH
Confidence 4443 3556 556554431 234444443322 233455667888775 11 1112223333333
Q ss_pred hhhhCCCeEEEEEeCCCcChHHHHHHHhhc-CC-CCEEEecCC--CcchHHHHHHHcccceehhhHHHH--HHHHcCCCE
Q 016179 268 LKDSFPELITVIHVAPNRHVENYITGLIQK-WP-VPSILVPGG--SSNLKYDAFSASRVALCTSGTVAV--ELQLARLPC 341 (394)
Q Consensus 268 l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~-~~-~~v~~~~g~--~~~~~~~~~~~ADl~I~~SGt~tl--Ea~a~G~P~ 341 (394)
..++ ....|++..... ..+.++..++. .. ....+.++. ..+.-.++|++||.+|+.+-..++ ||++.|+|+
T Consensus 192 ~l~~-~g~~~lisfSRR--Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sEAasTgkPv 268 (329)
T COG3660 192 ILEN-QGGSFLISFSRR--TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSEAASTGKPV 268 (329)
T ss_pred HHHh-CCceEEEEeecC--CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHHHhccCCCe
Confidence 3322 356777766642 12233444333 11 123344321 124467899999999999987775 999999998
Q ss_pred EEEEcCC
Q 016179 342 VVAYRAH 348 (394)
Q Consensus 342 Iv~y~~~ 348 (394)
.+.+..+
T Consensus 269 ~~~~~~~ 275 (329)
T COG3660 269 FILEPPN 275 (329)
T ss_pred EEEecCC
Confidence 8765443
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.2e-05 Score=74.81 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=68.6
Q ss_pred cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcC-CCCEEEecCC-CcchHHHHHH
Q 016179 241 TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKW-PVPSILVPGG-SSNLKYDAFS 318 (394)
Q Consensus 241 ~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~-~~~v~~~~g~-~~~~~~~~~~ 318 (394)
+.|++.|||++.+-.-..+.+.+.++.|.++ +.++++.+++++ ++..++..+.. ..++..+.+. ...+...+++
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e--~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~ 197 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE--RELAEEIAAALGGPRVVNLAGKTSLRELAALLA 197 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh--HHHHHHHHHhcCCCccccCcCCCCHHHHHHHHH
Confidence 4688888888653222245677777777654 788888877642 23334433322 1122222221 1367889999
Q ss_pred Hcccceeh-hhHHHHHHHHcCCCEEEEEcCChHH
Q 016179 319 ASRVALCT-SGTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 319 ~ADl~I~~-SGt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
.||++|+. ||++-+ |+++|+|+|.+|......
T Consensus 198 ~~~l~I~~Dsg~~Hl-A~a~~~p~i~l~g~~~~~ 230 (279)
T cd03789 198 RADLVVTNDSGPMHL-AAALGTPTVALFGPTDPA 230 (279)
T ss_pred hCCEEEeeCCHHHHH-HHHcCCCEEEEECCCCcc
Confidence 99999998 788777 579999999998765443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.4e-05 Score=78.47 Aligned_cols=276 Identities=14% Similarity=0.093 Sum_probs=135.9
Q ss_pred CceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETI 109 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~ 109 (394)
+|||+|+--+.=||+. +..+.+.|++..|+ +++..+..+.. ...++..-....+... .. +....-++...++.
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~-a~i~~~~~~~~-~~i~~~~p~I~~vi~~---~~-~~~~~~~~~~~~l~ 74 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPN-AKIDVLVPKGF-APILKLNPEIDKVIII---DK-KKKGLGLKERLALL 74 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCC-CEEEEEeccch-HHHHhcChHhhhhccc---cc-cccccchHHHHHHH
Confidence 4789999888889999 89999999999997 88776664321 1111110000001000 00 00001233455577
Q ss_pred HHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHH
Q 016179 110 EAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAIC 189 (394)
Q Consensus 110 ~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~ 189 (394)
+.+++.+.|+|+-... .+...+...+. ++|.-+-|...+ .+.. ..+.. ... +..+......
T Consensus 75 ~~lr~~~yD~vidl~~-~~ksa~l~~~~--------~~~~r~g~~~~~---~r~~--~~~~~---~~~--~~~~~~~~~~ 135 (334)
T COG0859 75 RTLRKERYDAVIDLQG-LLKSALLALLL--------GIPFRIGFDKKS---AREL--LLNKF---YPR--LDKPEGQHVV 135 (334)
T ss_pred HHhhccCCCEEEECcc-cHHHHHHHHHh--------CCCccccccccc---chhH--HHHHh---hhc--cCcccchhHH
Confidence 8888889999996532 22222222211 345322221111 1110 11111 111 1122211111
Q ss_pred HhcCCCeEEEcCCCch-hhhhhcCCCCCCCcccccCCChHHHHhhcCCCCC-CcEEEEECC-CcHHHHHh-hHHHHHHHH
Q 016179 190 RLNGLAATFVGHPVVE-DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSG-ATVISLLPG-SRLQEVAR-MLPIFAKTV 265 (394)
Q Consensus 190 ~~~g~~~~~vG~Pv~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~-~~~IlllgG-Srg~ei~~-~l~~ll~a~ 265 (394)
+++.--....|.+..+ ....+. .+....+.... +... +|.|++.|| |++.. ++ -...+.+.+
T Consensus 136 ~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~i~i~pg~s~~~~-K~wp~e~~~~l~ 201 (334)
T COG0859 136 ERYLALLEDLGLYPPPEPQLDFP-----------LPRPPIELAKN--LAKFDRPYIVINPGASRGSA-KRWPLEHYAELA 201 (334)
T ss_pred HHHHHHHHHhcCCCCCCCccCcc-----------cccCHHHHHHH--HHhcCCCeEEEecccccccc-CCCCHHHHHHHH
Confidence 1100001111211111 000000 01111111111 1111 689999999 88642 11 123566667
Q ss_pred HHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehhhHHHHHHHHcCCCEEEE
Q 016179 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTSGTVAVELQLARLPCVVA 344 (394)
Q Consensus 266 ~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~ 344 (394)
+.+.++. .++++.+++ .+ ++..++........+.+. +.. ..++..+++.||++|+-..+.+==|+|+|+|+|.+
T Consensus 202 ~~l~~~~--~~Vvl~g~~-~e-~e~~~~i~~~~~~~~~l~-~k~sL~e~~~li~~a~l~I~~DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 202 ELLIAKG--YQVVLFGGP-DE-EERAEEIAKGLPNAVILA-GKTSLEELAALIAGADLVIGNDSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHHHHCC--CEEEEecCh-HH-HHHHHHHHHhcCCccccC-CCCCHHHHHHHHhcCCEEEccCChHHHHHHHcCCCEEEE
Confidence 7776643 777776665 33 344555544443222223 322 46788899999999998766654599999999999
Q ss_pred EcCChH
Q 016179 345 YRAHFL 350 (394)
Q Consensus 345 y~~~~~ 350 (394)
|..+.-
T Consensus 277 yg~t~~ 282 (334)
T COG0859 277 YGPTSP 282 (334)
T ss_pred ECCCCc
Confidence 865543
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.42 E-value=4e-06 Score=73.35 Aligned_cols=121 Identities=15% Similarity=0.172 Sum_probs=77.8
Q ss_pred hHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh-CCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEE
Q 016179 227 SEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS-FPELITVIHVAPNRHVENYITGLIQKWP--VPSI 303 (394)
Q Consensus 227 ~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~-~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~ 303 (394)
++..+...+.++++++|+..| +.. ..+.+..+++++..+.++ .+++++++++.. .....+.......+ .++.
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g-~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~--~~~~~~~~~~~~~~~~~~i~ 76 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIG-RLD--PEKGIDLLIEAFKKLKEKKNPNYKLVIVGDG--EYKKELKNLIEKLNLKENII 76 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEES-ESS--GGGTHHHHHHHHHHHHHHHHTTEEEEEESHC--CHHHHHHHHHHHTTCGTTEE
T ss_pred hHHHHHHcCCCCCCeEEEEEe-cCc--cccCHHHHHHHHHHHHhhcCCCeEEEEEccc--cccccccccccccccccccc
Confidence 456777788888887777764 333 234467788999988753 578888887722 22333444444333 2577
Q ss_pred EecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHH
Q 016179 304 LVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEW 353 (394)
Q Consensus 304 ~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~ 353 (394)
++.....+++.++++.||++|..| |.+.+||+++|+|+|+ ...+.....
T Consensus 77 ~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~-~~~~~~~e~ 130 (172)
T PF00534_consen 77 FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIA-SDIGGNNEI 130 (172)
T ss_dssp EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEE-ESSTHHHHH
T ss_pred ccccccccccccccccceeccccccccccccccccccccccceee-ccccCCcee
Confidence 764421248999999999999997 4555699999999886 555555433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-05 Score=79.32 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=92.0
Q ss_pred HHhhhheeecCcccHHHHHhc-CC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECC
Q 016179 172 AAFVDHILCILPNEEAICRLN-GL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPG 248 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~~-g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgG 248 (394)
.+.+|.+++.++..++.+.+. +. ++.++.+++...... ... ..+.+...++.+ |
T Consensus 155 ~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~---------------~~~-------~~~~~~~~i~~v-g 211 (372)
T cd04949 155 LDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKL---------------PAQ-------FKQRKPHKIITV-A 211 (372)
T ss_pred hhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhc---------------ccc-------hhhcCCCeEEEE-E
Confidence 456899999999888776543 22 244555554332210 000 011233455554 3
Q ss_pred CcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccceeh
Q 016179 249 SRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCT 326 (394)
Q Consensus 249 Srg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~ 326 (394)
.. ..- +.+..+++++..+.++.|++++++.+.+.. ...++......+. ++.+. |+ .+++.++|+.||++|..
T Consensus 212 rl-~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~ad~~v~~ 285 (372)
T cd04949 212 RL-APE-KQLDQLIKAFAKVVKQVPDATLDIYGYGDE--EEKLKELIEELGLEDYVFLK-GY-TRDLDEVYQKAQLSLLT 285 (372)
T ss_pred cc-Ccc-cCHHHHHHHHHHHHHhCCCcEEEEEEeCch--HHHHHHHHHHcCCcceEEEc-CC-CCCHHHHHhhhhEEEec
Confidence 33 222 346678899999988889999888876532 2334444443332 35544 44 57899999999999999
Q ss_pred h-----hHHHHHHHHcCCCEEEEEcCC
Q 016179 327 S-----GTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 327 S-----Gt~tlEa~a~G~P~Iv~y~~~ 348 (394)
| |.+.+||+++|+|+|. ++.+
T Consensus 286 S~~Eg~~~~~lEAma~G~PvI~-~~~~ 311 (372)
T cd04949 286 SQSEGFGLSLMEALSHGLPVIS-YDVN 311 (372)
T ss_pred ccccccChHHHHHHhCCCCEEE-ecCC
Confidence 9 4455699999999886 5443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.3e-05 Score=72.40 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=72.1
Q ss_pred HHHHhhcCCCCCCcEEEEECCCcHHHHHhh-HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEec
Q 016179 228 EDFKNKYSVPSGATVISLLPGSRLQEVARM-LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVP 306 (394)
Q Consensus 228 ~~~r~~lgl~~~~~~IlllgGSrg~ei~~~-l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~ 306 (394)
+.+..+++++.+++.|++-||++....++- ...+.+.++.|.+ .+.++++.+++++ ++..++.....+..+.-+.
T Consensus 162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD--HPAGNEIEALLPGELRNLA 237 (334)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh--HHHHHHHHHhCCcccccCC
Confidence 344567788777889999999863212221 2256667777754 3578888877643 2333333322221221122
Q ss_pred CC-CcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCC
Q 016179 307 GG-SSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 307 g~-~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~ 348 (394)
|. ...+...+++.||++|+--.+..==|+|+|+|+|.+|...
T Consensus 238 g~~sL~el~ali~~a~l~I~~DSGp~HlAaA~~~P~i~lfG~t 280 (334)
T TIGR02195 238 GETSLDEAVDLIALAKAVVTNDSGLMHVAAALNRPLVALYGST 280 (334)
T ss_pred CCCCHHHHHHHHHhCCEEEeeCCHHHHHHHHcCCCEEEEECCC
Confidence 32 1467889999999999976444323899999999887543
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.4e-05 Score=77.74 Aligned_cols=154 Identities=13% Similarity=0.060 Sum_probs=94.2
Q ss_pred HHHhhhheeecCcccHHHHHh-cCC---CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 171 LAAFVDHILCILPNEEAICRL-NGL---AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~-~g~---~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
+.+.+|.+++.++..++.+.+ ++. ++.++.+++..... . .. ...++.++|+.+
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~--~--------------~~-------~~~~~~~~il~~ 236 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGI--I--------------SK-------PSKDDTLRIVSC 236 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccc--c--------------CC-------CCCCCCEEEEEe
Confidence 457899999999999888754 333 24455555432211 0 00 012344555554
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhhhhCCC--eEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCC-cchHHHHHHH--
Q 016179 247 PGSRLQEVARMLPIFAKTVELLKDSFPE--LITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGS-SNLKYDAFSA-- 319 (394)
Q Consensus 247 gGSrg~ei~~~l~~ll~a~~~l~~~~~~--~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~-~~~~~~~~~~-- 319 (394)
| |-...++ ++.+++++..+.+..|+ +.+++++++. . .+.+++...+.+. ++.+. |+. .+++.++|+.
T Consensus 237 -G-rl~~~Kg-~~~li~a~~~l~~~~p~~~l~~~iiG~g~-~-~~~l~~~~~~~~~~~~V~f~-G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 237 -S-YLVPVKR-VDLIIKALAALAKARPSIKIKWTHIGGGP-L-EDTLKELAESKPENISVNFT-GELSNSEVYKLYKENP 310 (407)
T ss_pred -e-ccccccC-HHHHHHHHHHHHHhCCCceEEEEEEeCch-H-HHHHHHHHHhcCCCceEEEe-cCCChHHHHHHHhhcC
Confidence 3 3333343 67889999999877664 5556666542 2 3445555543332 35554 543 3578888875
Q ss_pred cccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 320 SRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 320 ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+|+++..| |.+.+|||++|+|+|. .+.++....+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G~PVIa-s~vgg~~e~i 349 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFGIPVIA-TNVGGTPEIV 349 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcCCCEEe-CCCCCcHHHh
Confidence 67787777 4566799999999875 5666666555
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-05 Score=78.89 Aligned_cols=150 Identities=13% Similarity=0.041 Sum_probs=89.2
Q ss_pred HHHHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC
Q 016179 170 NLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS 249 (394)
Q Consensus 170 ~l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS 249 (394)
++.+.+|.+++.++...+.+.+.+.+++++.|-+..... .+. .......+.. ...+.++|+.. |+
T Consensus 149 ~~~~~ad~vi~~S~~l~~~~~~~~~~i~~i~ngvd~~~f--~~~----------~~~~~~~~~~--~~~~~~~i~y~-G~ 213 (373)
T cd04950 149 RLLKRADLVFTTSPSLYEAKRRLNPNVVLVPNGVDYEHF--AAA----------RDPPPPPADL--AALPRPVIGYY-GA 213 (373)
T ss_pred HHHHhCCEEEECCHHHHHHHhhCCCCEEEcccccCHHHh--hcc----------cccCCChhHH--hcCCCCEEEEE-ec
Confidence 467789999999999998888777678888876643322 110 0000000111 12345666665 45
Q ss_pred cHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh--
Q 016179 250 RLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS-- 327 (394)
Q Consensus 250 rg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-- 327 (394)
.+. +..+..+ ..+.+..|++++++++..+... + ..+ .... .+++++.....++++++++.+|++|..+
T Consensus 214 l~~--~~d~~ll----~~la~~~p~~~~vliG~~~~~~-~-~~~-~~~~-~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 214 IAE--WLDLELL----EALAKARPDWSFVLIGPVDVSI-D-PSA-LLRL-PNVHYLGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred ccc--ccCHHHH----HHHHHHCCCCEEEEECCCcCcc-C-hhH-hccC-CCEEEeCCCCHHHHHHHHHhCCEEecCCcc
Confidence 543 2223322 3334456889999888641111 1 111 1222 3687774321478999999999999764
Q ss_pred --------hHHHHHHHHcCCCEEEE
Q 016179 328 --------GTVAVELQLARLPCVVA 344 (394)
Q Consensus 328 --------Gt~tlEa~a~G~P~Iv~ 344 (394)
+.-.+|++++|+|+|..
T Consensus 284 ~~~~~~~~P~Kl~EylA~G~PVVat 308 (373)
T cd04950 284 NELTRATSPLKLFEYLAAGKPVVAT 308 (373)
T ss_pred chhhhcCCcchHHHHhccCCCEEec
Confidence 23345999999998853
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00015 Score=71.43 Aligned_cols=276 Identities=14% Similarity=0.146 Sum_probs=133.5
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
|||||+--+.=||+. +..+++.||+..|+ .++..+..+...+. ++..-...++-........+. +....++.+
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~-a~I~~l~~~~~~~l-~~~~P~vd~vi~~~~~~~~~~----~~~~~~l~~ 74 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQ-AIIDVMAPAWCRPL-LSRMPEVNEAIPMPLGHGALE----IGERRRLGH 74 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCC-CeEEEEechhhHHH-HhcCCccCEEEecccccchhh----hHHHHHHHH
Confidence 689999888899999 88999999999996 88776665543221 111000111110000000011 122344667
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+++.++|++|..+. .+-..+...+. +.|..+-|... .| + + ..+... ..+.. ..+...+.+.
T Consensus 75 ~lr~~~yD~vidl~~-~~~s~~l~~~~--------~~~~rig~~~~-~~-~--~--~~~~~~-~~~~~--~~~h~~~~~~ 136 (348)
T PRK10916 75 SLREKRYDRAYVLPN-SFKSALVPFFA--------GIPHRTGWRGE-MR-Y--G--LLNDLR-VLDKE--AFPLMVERYV 136 (348)
T ss_pred HHHhcCCCEEEECCC-cHHHHHHHHHc--------CCCeEeecccC-cc-c--c--cccccc-ccCcc--cCcHHHHHHH
Confidence 788899999997642 23333333332 44543344211 10 0 0 000000 00000 0111111111
Q ss_pred h----cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhh-HHHHHHHH
Q 016179 191 L----NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM-LPIFAKTV 265 (394)
Q Consensus 191 ~----~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~-l~~ll~a~ 265 (394)
. .+......+.|......++. + ...+.+.+...+++.++++.|++-||++....++- ...+.+.+
T Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~ 206 (348)
T PRK10916 137 ALAYDKGVMRTAADLPQPLLWPQLQ---------V-SEGEKSETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELA 206 (348)
T ss_pred HHhcccccccccccCCCCcCCCccc---------c-CHHHHHHHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHH
Confidence 1 01000001111000000000 0 00112234455666667789999999873112221 12456666
Q ss_pred HHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC----CEEEecCCC-cchHHHHHHHcccceehh-hHHHHHHHHcCC
Q 016179 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV----PSILVPGGS-SNLKYDAFSASRVALCTS-GTVAVELQLARL 339 (394)
Q Consensus 266 ~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~----~v~~~~g~~-~~~~~~~~~~ADl~I~~S-Gt~tlEa~a~G~ 339 (394)
+.|.+ .+.++++.+++.+ ++..++....... ++.-+.|.. ..+...+++.||++|+-- |.+=+ |+|+|+
T Consensus 207 ~~l~~--~~~~vvl~Gg~~e--~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDTGp~Hl-AaA~g~ 281 (348)
T PRK10916 207 QQLID--EGYQVVLFGSAKD--HEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSGLMHV-AAALNR 281 (348)
T ss_pred HHHHH--CCCeEEEEeCHHh--HHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEEecCChHHHH-HHHhCC
Confidence 66653 3678888777632 2233333322211 122222321 467888999999999966 44445 999999
Q ss_pred CEEEEEc
Q 016179 340 PCVVAYR 346 (394)
Q Consensus 340 P~Iv~y~ 346 (394)
|+|.+|-
T Consensus 282 P~valfG 288 (348)
T PRK10916 282 PLVALYG 288 (348)
T ss_pred CEEEEEC
Confidence 9998874
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.6e-05 Score=81.38 Aligned_cols=106 Identities=20% Similarity=0.219 Sum_probs=66.9
Q ss_pred hhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCC----cC---hHHHHHHHhhc---
Q 016179 232 NKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPN----RH---VENYITGLIQK--- 297 (394)
Q Consensus 232 ~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~----~~---~~~~l~~~~~~--- 297 (394)
+..+..+++++|+.+ +|-...|. +..+++|++.+.+++|+ +++++++++. .. +.+.+++...+
T Consensus 256 ~~~~~~~~~~~il~v--gRl~~~Kg-i~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~ 332 (460)
T cd03788 256 ELRERLGGRKLIVGV--DRLDYSKG-IPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRING 332 (460)
T ss_pred HHHHhcCCCEEEEEe--cCccccCC-HHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHh
Confidence 334555667666655 45544444 67788999988877775 5677665432 11 22223332211
Q ss_pred -CC----CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCC
Q 016179 298 -WP----VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLP 340 (394)
Q Consensus 298 -~~----~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P 340 (394)
.+ .++.++.+.. .+++.++|++||++|..| |.+.+|+++||+|
T Consensus 333 ~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 333 KFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD 386 (460)
T ss_pred ccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC
Confidence 11 1344554432 578999999999999998 5566799999999
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.2e-05 Score=72.28 Aligned_cols=107 Identities=12% Similarity=0.092 Sum_probs=63.6
Q ss_pred cCCCCCCcEEEEECCCcHHHHHhh-HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cc
Q 016179 234 YSVPSGATVISLLPGSRLQEVARM-LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SN 311 (394)
Q Consensus 234 lgl~~~~~~IlllgGSrg~ei~~~-l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~ 311 (394)
++...+++.|++.||+... -++. ...+.+.++.|.++ +.++++.+|+..+ ++..++.....+ +..+. +.. ..
T Consensus 173 ~~~~~~~~~i~i~~gas~~-~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~e-~~~~~~i~~~~~-~~~l~-g~~sL~ 246 (319)
T TIGR02193 173 LGHALPAPYAVLLHATSRD-DKTWPEERWRELARLLLAR--GLQIVLPWGNDAE-KQRAERIAEALP-GAVVL-PKMSLA 246 (319)
T ss_pred hhccCCCCEEEEEeCCCcc-cCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHHH-HHHHHHHHhhCC-CCeec-CCCCHH
Confidence 3444456778888887653 2221 23566777777542 6787776554222 222333333222 22222 321 46
Q ss_pred hHHHHHHHcccceehh-hHHHHHHHHcCCCEEEEEcC
Q 016179 312 LKYDAFSASRVALCTS-GTVAVELQLARLPCVVAYRA 347 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~S-Gt~tlEa~a~G~P~Iv~y~~ 347 (394)
+..++++.||++|+-- |.+=+ |+++|+|+|.+|-.
T Consensus 247 el~ali~~a~l~I~~DSgp~Hl-Aaa~g~P~i~lfg~ 282 (319)
T TIGR02193 247 EVAALLAGADAVVGVDTGLTHL-AAALDKPTVTLYGA 282 (319)
T ss_pred HHHHHHHcCCEEEeCCChHHHH-HHHcCCCEEEEECC
Confidence 7888999999999976 44445 88999999988743
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.3e-05 Score=66.06 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=64.3
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HH
Q 016179 95 LPHIYKFRVRLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LA 172 (394)
Q Consensus 95 l~~~~~~~~~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~ 172 (394)
+..+...+..+.++.+++.+.+||+||++| ...+|+.+++++.+.... .+.++ ++. . + |+-......+=| +.
T Consensus 71 ~~~~~~~l~~~~~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~--~~~ki-IyI-E-S-~aRv~~lSlTGklly 144 (170)
T PF08660_consen 71 LTSIFTTLRAFLQSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGL--RGSKI-IYI-E-S-FARVKTLSLTGKLLY 144 (170)
T ss_pred HhhHHHHHHHHHHHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhc--cCCcE-EEE-E-e-eeecCCCchHHHHHH
Confidence 344556677778889999999999999998 456788888777643211 15664 432 1 2 221111123323 58
Q ss_pred HhhhheeecCcccHHHHHhcCCCeEEEcC
Q 016179 173 AFVDHILCILPNEEAICRLNGLAATFVGH 201 (394)
Q Consensus 173 ~~~d~v~~~~p~~~~~~~~~g~~~~~vG~ 201 (394)
+++|.++|-.|+..+.|+ ++.|.|.
T Consensus 145 ~~aD~f~VQW~~l~~~yp----~a~y~G~ 169 (170)
T PF08660_consen 145 PFADRFIVQWEELAEKYP----RAIYVGR 169 (170)
T ss_pred HhCCEEEEcCHHHHhHCC----CCEEEee
Confidence 899999999998888774 3677773
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00036 Score=68.86 Aligned_cols=104 Identities=11% Similarity=0.129 Sum_probs=63.6
Q ss_pred CcEEEEECCCcHHHHHhh-HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC-CCEEEecCCC-cchHHHH
Q 016179 240 ATVISLLPGSRLQEVARM-LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP-VPSILVPGGS-SNLKYDA 316 (394)
Q Consensus 240 ~~~IlllgGSrg~ei~~~-l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~-~~v~~~~g~~-~~~~~~~ 316 (394)
.+.|++-||+... .++- ...+.+.++.|.+ .+.++++.+|++++..+..++...... .++..+.|.. ..+...+
T Consensus 183 ~~~i~i~pga~~~-~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 183 QNYVVIQPTARQI-FKCWDNDKFSAVIDALQA--RGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCeEEEecCCCcc-ccCCCHHHHHHHHHHHHH--CCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence 4788899998753 2321 2256667777754 368888887765322222233332211 1222222322 4678899
Q ss_pred HHHcccceehhhHHHHHHHHcCCCEEEEEc
Q 016179 317 FSASRVALCTSGTVAVELQLARLPCVVAYR 346 (394)
Q Consensus 317 ~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~ 346 (394)
++.||++|+--.+..==|+|+|+|+|.+|-
T Consensus 260 i~~a~l~v~nDSGp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 260 IDHAQLFIGVDSAPAHIAAAVNTPLICLFG 289 (352)
T ss_pred HHhCCEEEecCCHHHHHHHHcCCCEEEEEC
Confidence 999999999764444238999999998874
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00026 Score=72.44 Aligned_cols=112 Identities=20% Similarity=0.226 Sum_probs=68.9
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCC----cChHHHHHHHhhcC---
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPN----RHVENYITGLIQKW--- 298 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~----~~~~~~l~~~~~~~--- 298 (394)
+|+++ .++++|+.+ +|-...|. ++.+++|++.+.+++|+ +.+++++++. .++ +.+++.+++.
T Consensus 252 lr~~~---~~~~vIl~V--gRLd~~KG-i~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~-~~l~~~i~~lv~~ 324 (456)
T TIGR02400 252 LRESL---KGRKLIIGV--DRLDYSKG-LPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEY-QQLRRQVEELVGR 324 (456)
T ss_pred HHHHc---CCCeEEEEc--cccccccC-HHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHH-HHHHHHHHHHHHH
Confidence 45555 255555544 45555554 78899999998877775 4566665432 111 2222222211
Q ss_pred -----C----CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCC----EEEEEcCC
Q 016179 299 -----P----VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLP----CVVAYRAH 348 (394)
Q Consensus 299 -----~----~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P----~Iv~y~~~ 348 (394)
+ ..+.++.+.. .+++.++|++||+++..| |.+.+|+++||+| +|+....+
T Consensus 325 in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G 393 (456)
T TIGR02400 325 INGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG 393 (456)
T ss_pred HHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCC
Confidence 1 1244443322 578999999999999999 5666799999999 77643333
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00065 Score=66.77 Aligned_cols=105 Identities=13% Similarity=0.152 Sum_probs=64.0
Q ss_pred CCcEEEEECCCcHHHHHhh-HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEEecCCC-cchHHH
Q 016179 239 GATVISLLPGSRLQEVARM-LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGS-SNLKYD 315 (394)
Q Consensus 239 ~~~~IlllgGSrg~ei~~~-l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~~~g~~-~~~~~~ 315 (394)
+++.|++-||++.. .++- ...+.+.++.|.+ .+.++++.++++++.++..++.....+. ++.-+.|.. ..++..
T Consensus 180 ~~~~i~i~p~a~~~-~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWF-FKCWDNDRFSALIDALHA--RGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCcc-ccCCCHHHHHHHHHHHHh--CCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 45778899998763 2221 2355666666654 3578888877642212223333222221 222222321 467889
Q ss_pred HHHHcccceehhh-HHHHHHHHcCCCEEEEEcC
Q 016179 316 AFSASRVALCTSG-TVAVELQLARLPCVVAYRA 347 (394)
Q Consensus 316 ~~~~ADl~I~~SG-t~tlEa~a~G~P~Iv~y~~ 347 (394)
+++.||++|+--. .+=+ |+|+|+|+|.+|-.
T Consensus 257 li~~a~l~Vs~DSGp~Hl-AaA~g~p~v~Lfgp 288 (344)
T TIGR02201 257 LIDHARLFIGVDSVPMHM-AAALGTPLVALFGP 288 (344)
T ss_pred HHHhCCEEEecCCHHHHH-HHHcCCCEEEEECC
Confidence 9999999999754 4445 99999999988753
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.001 Score=64.68 Aligned_cols=102 Identities=12% Similarity=0.165 Sum_probs=59.6
Q ss_pred CCcEEEEECCCcHHHHHhhHH--HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 239 GATVISLLPGSRLQEVARMLP--IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 239 ~~~~IlllgGSrg~ei~~~l~--~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
+.+.|++.+|+... .+..| .+.+.++.|.+ .+.++++..|+..+ ++..++..+... .+.+.......++..+
T Consensus 177 ~~~~i~~~~~~s~~--~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~e-~~~~~~i~~~~~-~~~l~g~~sL~elaal 250 (322)
T PRK10964 177 AGPYLVFLHATTRD--DKHWPEAHWRELIGLLAP--SGLRIKLPWGAEHE-EQRAKRLAEGFP-YVEVLPKLSLEQVARV 250 (322)
T ss_pred CCCeEEEEeCCCcc--cccCCHHHHHHHHHHHHH--CCCeEEEeCCCHHH-HHHHHHHHccCC-cceecCCCCHHHHHHH
Confidence 44566666666432 22233 56677777754 25777665443222 233333333221 2333322224678889
Q ss_pred HHHcccceehhhHHHHHHHHcCCCEEEEEc
Q 016179 317 FSASRVALCTSGTVAVELQLARLPCVVAYR 346 (394)
Q Consensus 317 ~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~ 346 (394)
++.||++|+--.+..==|+++|+|+|.+|-
T Consensus 251 i~~a~l~I~nDSGp~HlA~A~g~p~valfG 280 (322)
T PRK10964 251 LAGAKAVVSVDTGLSHLTAALDRPNITLYG 280 (322)
T ss_pred HHhCCEEEecCCcHHHHHHHhCCCEEEEEC
Confidence 999999999764444349999999998874
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00082 Score=65.22 Aligned_cols=197 Identities=12% Similarity=0.113 Sum_probs=105.0
Q ss_pred HHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHH
Q 016179 110 EAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAIC 189 (394)
Q Consensus 110 ~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~ 189 (394)
..+..-.||+||++|.. +...+..+++.+.+ +.+ +++-..|..+ .+..|.+++.-.+..
T Consensus 51 ~~~~~~~pdLiIsaGr~--t~~~~~~l~r~~gg---~~~-~V~i~~P~~~------------~~~FDlvi~p~HD~~--- 109 (311)
T PF06258_consen 51 PALEPPWPDLIISAGRR--TAPAALALRRASGG---RTK-TVQIMDPRLP------------PRPFDLVIVPEHDRL--- 109 (311)
T ss_pred ccccCCCCcEEEECCCc--hHHHHHHHHHHcCC---Cce-EEEEcCCCCC------------ccccCEEEECcccCc---
Confidence 33445679999999853 44445556655421 234 4555456543 124788876543311
Q ss_pred HhcCCCeE-EEc--CCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH-HH-HhhHHHHHHH
Q 016179 190 RLNGLAAT-FVG--HPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ-EV-ARMLPIFAKT 264 (394)
Q Consensus 190 ~~~g~~~~-~vG--~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~-ei-~~~l~~ll~a 264 (394)
. .|-++. -.| |++.++-.. ..+.++..+++-.+...+.+++||.-+. .. .+....+++.
T Consensus 110 ~-~~~Nvl~t~ga~~~i~~~~l~---------------~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~ 173 (311)
T PF06258_consen 110 P-RGPNVLPTLGAPNRITPERLA---------------EAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQ 173 (311)
T ss_pred C-CCCceEecccCCCcCCHHHHH---------------HHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHH
Confidence 0 122332 345 344433211 1123333445433344455567776654 21 1112234455
Q ss_pred HHHhhhhCCCeEEEEEeCCC--cChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH--HHHHcCCC
Q 016179 265 VELLKDSFPELITVIHVAPN--RHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV--ELQLARLP 340 (394)
Q Consensus 265 ~~~l~~~~~~~~~vi~~g~~--~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl--Ea~a~G~P 340 (394)
+..+.+..+ .++++.+... .+..+.+++..... ..+.++.+...+-..++|+.||.+++..-.+++ ||++.|+|
T Consensus 174 l~~~~~~~~-~~~~vttSRRTp~~~~~~L~~~~~~~-~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~p 251 (311)
T PF06258_consen 174 LAALAAAYG-GSLLVTTSRRTPPEAEAALRELLKDN-PGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKP 251 (311)
T ss_pred HHHHHHhCC-CeEEEEcCCCCcHHHHHHHHHhhcCC-CceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCC
Confidence 555555544 6777776642 11223333333222 235455432235588999999999999987774 99999999
Q ss_pred EEEEE
Q 016179 341 CVVAY 345 (394)
Q Consensus 341 ~Iv~y 345 (394)
+.+..
T Consensus 252 V~v~~ 256 (311)
T PF06258_consen 252 VYVLP 256 (311)
T ss_pred EEEec
Confidence 88753
|
The function of this family is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0028 Score=62.10 Aligned_cols=192 Identities=11% Similarity=0.061 Sum_probs=101.8
Q ss_pred HHHHHhcCC-CEEEEeCCCCch-----HHHHHHHHHhccccCCCCCeEEEeecCccccccC---c--chHHHHHHHhhhh
Q 016179 109 IEAALLFRP-HAVVTVDSKGFS-----FRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG---G--EARLKNLAAFVDH 177 (394)
Q Consensus 109 ~~~i~~~~P-D~Vi~~~~~~f~-----~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~---g--~~r~~~l~~~~d~ 177 (394)
.+++...+| |+|+.. +|... ..+..+++++ ++|+++++ |..|..+. + .....++.+.+|.
T Consensus 56 ~~~~~~~~~~Dvv~~~-~P~~~~~~~~~~~~~~~k~~------~~k~i~~i--hD~~~~~~~~~~~~~~~~~~~~~~aD~ 126 (333)
T PRK09814 56 DGILASLKPGDIVIFQ-FPTWNGFEFDRLFVDKLKKK------QVKIIILI--HDIEPLRFDSNYYLMKEEIDMLNLADV 126 (333)
T ss_pred HHHHhcCCCCCEEEEE-CCCCchHHHHHHHHHHHHHc------CCEEEEEE--CCcHHHhccccchhhHHHHHHHHhCCE
Confidence 345677888 988865 55442 2233444433 57864432 33432110 0 0112346778999
Q ss_pred eeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHH
Q 016179 178 ILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEV 254 (394)
Q Consensus 178 v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei 254 (394)
+++.++..++.+.++|++ +++++ ..+.... ...+. .+++.++|+.. |+.+. .
T Consensus 127 iI~~S~~~~~~l~~~g~~~~~i~~~~--~~~~~~~------------------~~~~~---~~~~~~~i~ya-G~l~k-~ 181 (333)
T PRK09814 127 LIVHSKKMKDRLVEEGLTTDKIIVQG--IFDYLND------------------IELVK---TPSFQKKINFA-GNLEK-S 181 (333)
T ss_pred EEECCHHHHHHHHHcCCCcCceEecc--ccccccc------------------ccccc---cccCCceEEEe-cChhh-c
Confidence 999999999999888863 33332 2121100 00000 11234455554 55541 1
Q ss_pred HhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhh------
Q 016179 255 ARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSG------ 328 (394)
Q Consensus 255 ~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SG------ 328 (394)
.. +.+..+++++++.+.+. .. + ....++.+......++++++|+. |+.+.-.+
T Consensus 182 ----~~-------l~~~~~~~~l~i~G~g~-~~-~-------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~ 240 (333)
T PRK09814 182 ----PF-------LKNWSQGIKLTVFGPNP-ED-L-------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGE 240 (333)
T ss_pred ----hH-------HHhcCCCCeEEEECCCc-cc-c-------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCcc
Confidence 11 11123578877776542 21 1 11235776633224678888887 65444322
Q ss_pred ----------HHHHHHHHcCCCEEEEEcCChHHHHHHH
Q 016179 329 ----------TVAVELQLARLPCVVAYRAHFLTEWFIR 356 (394)
Q Consensus 329 ----------t~tlEa~a~G~P~Iv~y~~~~~~~~~a~ 356 (394)
.-+.|.+++|+|+|+ .+.+.+..++.+
T Consensus 241 ~~~y~~~~~P~K~~~ymA~G~PVI~-~~~~~~~~~V~~ 277 (333)
T PRK09814 241 YGEYYKYNNPHKLSLYLAAGLPVIV-WSKAAIADFIVE 277 (333)
T ss_pred chhhhhccchHHHHHHHHCCCCEEE-CCCccHHHHHHh
Confidence 114489999999886 666666666643
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=6.3e-05 Score=63.61 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=56.7
Q ss_pred EEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-cccC-cceecc-HHHhhhhHHHHHHHHHH
Q 016179 34 VFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPME-DIAVMG-IWELLPHIYKFRVRLKE 107 (394)
Q Consensus 34 IlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~~-~l~~~G-~~~~l~~~~~~~~~~~~ 107 (394)
|+|+++|+.||++ ..+|+++|++++++ +.+....+ +..++.|++.. ++.. .+.... ....+..+.+..+.+.+
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~-V~~~~~~~~~~~v~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHE-VRLATPPDFRERVEAAGLEFVPIPGDSRLPRSLEPLANLRRLARLIRGLEE 79 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-E-EEEEETGGGHHHHHHTT-EEEESSSCGGGGHHHHHHHHHHCHHHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCe-EEEeecccceecccccCceEEEecCCcCcCcccchhhhhhhHHHHhhhhhH
Confidence 6899999999999 99999999999875 76444322 12466676632 2222 111100 22333444455556778
Q ss_pred HHHHHHhcCCCEEEEeC
Q 016179 108 TIEAALLFRPHAVVTVD 124 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~ 124 (394)
+.+.+++++||.++..+
T Consensus 80 ~~~~~~~~~~~~~~~~~ 96 (139)
T PF03033_consen 80 AMRILARFRPDLVVAAG 96 (139)
T ss_dssp HHHHHHHHHHCCCCHCT
T ss_pred HHHHhhccCcchhhhcc
Confidence 88888888888877654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.048 Score=55.32 Aligned_cols=162 Identities=10% Similarity=-0.001 Sum_probs=86.2
Q ss_pred HHHHHhhhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCC--ChHHHHhhcCCCCCCcEE
Q 016179 169 KNLAAFVDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEG--NSEDFKNKYSVPSGATVI 243 (394)
Q Consensus 169 ~~l~~~~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~lgl~~~~~~I 243 (394)
+++.+.+|.+.+-.+.+.+.+++.|++ +.++.-|..- +++. ... ........++...++++|
T Consensus 171 r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpAF~----L~~~---------~~~~~~~~~~~~~~~~~~~~~~V 237 (426)
T PRK10017 171 NYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWL----VDHH---------TEDFTASYAVQHWLDVAAQQKTV 237 (426)
T ss_pred HHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChhhh----CCcc---------ccccccchhhhhhhcccccCCEE
Confidence 345667999999999999999999985 4566666432 1100 000 000111222333456777
Q ss_pred EEECCCcH-H------HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCC------CcChHHHHHHHhhcCC--CCEEEec-C
Q 016179 244 SLLPGSRL-Q------EVARMLPIFAKTVELLKDSFPELITVIHVAP------NRHVENYITGLIQKWP--VPSILVP-G 307 (394)
Q Consensus 244 lllgGSrg-~------ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~------~~~~~~~l~~~~~~~~--~~v~~~~-g 307 (394)
++..-... . .-......+.+++..+.++ +.+++++..- .++.....++...... .+++++. .
T Consensus 238 gisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~--g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~ 315 (426)
T PRK10017 238 AITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE--GYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDE 315 (426)
T ss_pred EEEecccccccccccccHHHHHHHHHHHHHHHHHC--CCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCC
Confidence 77532221 0 0012234556667766543 4454433321 1121222222222221 1334442 2
Q ss_pred CCcchHHHHHHHcccceehhhHHHHHHHHcCCCEEEE-E
Q 016179 308 GSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVA-Y 345 (394)
Q Consensus 308 ~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~-y 345 (394)
+...++..+++.||++|+.===+++=+++.|+|+|.+ |
T Consensus 316 ~~~~e~~~iIs~~dl~ig~RlHa~I~a~~~gvP~i~i~Y 354 (426)
T PRK10017 316 LNDLEMGKILGACELTVGTRLHSAIISMNFGTPAIAINY 354 (426)
T ss_pred CChHHHHHHHhhCCEEEEecchHHHHHHHcCCCEEEeee
Confidence 2224566889999999987655666799999999976 5
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00032 Score=69.56 Aligned_cols=159 Identities=16% Similarity=0.204 Sum_probs=85.3
Q ss_pred HHHHhhhheeecCcccHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEE
Q 016179 170 NLAAFVDHILCILPNEEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISL 245 (394)
Q Consensus 170 ~l~~~~d~v~~~~p~~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Ill 245 (394)
+..+..|.+++.++++++.+.+ .+.+ +..+|.|-.|.+.... ...+..+++.++++.++++||.
T Consensus 130 ~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~------------~~~~~~i~~~~~~~~~~k~ILy 197 (369)
T PF04464_consen 130 RNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKS------------KENRNRIKKKLGIDKDKKVILY 197 (369)
T ss_dssp HHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHST------------T-HHHHHHHHTT--SS-EEEEE
T ss_pred hhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccC------------HHHHHHHHHHhccCCCCcEEEE
Confidence 4577889999999999888765 4554 7789999888775321 1124567888999999999999
Q ss_pred ECCCcHHHHH-----hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHc
Q 016179 246 LPGSRLQEVA-----RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSAS 320 (394)
Q Consensus 246 lgGSrg~ei~-----~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~A 320 (394)
+|-=|+.... .....-.+.+..+ ..++..+++-.++. ........ .....++..+.. .+++.++|..|
T Consensus 198 aPT~R~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~li~k~Hp~--~~~~~~~~-~~~~~~i~~~~~--~~~~~~ll~~a 270 (369)
T PF04464_consen 198 APTWRDNSSNEYFKFFFSDLDFEKLNFL--LKNNYVLIIKPHPN--MKKKFKDF-KEDNSNIIFVSD--NEDIYDLLAAA 270 (369)
T ss_dssp E----GGG--GGSS----TT-HHHHHHH--HTTTEEEEE--SHH--HHTT-----TT-TTTEEE-TT---S-HHHHHHT-
T ss_pred eeccccccccccccccccccCHHHHHHH--hCCCcEEEEEeCch--hhhchhhh-hccCCcEEECCC--CCCHHHHHHhc
Confidence 9976665332 0011111222222 23578777666542 11111111 111235666554 35799999999
Q ss_pred ccceehhhHHHHHHHHcCCCEEEEEcCC
Q 016179 321 RVALCTSGTVAVELQLARLPCVVAYRAH 348 (394)
Q Consensus 321 Dl~I~~SGt~tlEa~a~G~P~Iv~y~~~ 348 (394)
|++||--.++..|.+++++|+|. |..+
T Consensus 271 DiLITDySSi~fD~~~l~KPiif-y~~D 297 (369)
T PF04464_consen 271 DILITDYSSIIFDFLLLNKPIIF-YQPD 297 (369)
T ss_dssp SEEEESS-THHHHHGGGT--EEE-E-TT
T ss_pred CEEEEechhHHHHHHHhCCCEEE-Eecc
Confidence 99999988888899999999885 4433
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0004 Score=58.03 Aligned_cols=78 Identities=18% Similarity=0.149 Sum_probs=52.0
Q ss_pred HHHHHH-HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh------hHH
Q 016179 258 LPIFAK-TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS------GTV 330 (394)
Q Consensus 258 l~~ll~-a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S------Gt~ 330 (394)
+..+++ +++++.++.|++++.+.+... + .+++. . ..++++... .+++.++++.||++|..+ ++.
T Consensus 17 ~~~li~~~~~~l~~~~p~~~l~i~G~~~-~---~l~~~-~--~~~v~~~g~--~~e~~~~l~~~dv~l~p~~~~~~~~~k 87 (135)
T PF13692_consen 17 LEELIEAALERLKEKHPDIELIIIGNGP-D---ELKRL-R--RPNVRFHGF--VEELPEILAAADVGLIPSRFNEGFPNK 87 (135)
T ss_dssp HHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-H--HCTEEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HH
T ss_pred ccchhhhHHHHHHHHCcCEEEEEEeCCH-H---HHHHh-c--CCCEEEcCC--HHHHHHHHHhCCEEEEEeeCCCcCcHH
Confidence 456777 889998888999988877642 2 23333 1 126877744 378999999999999965 234
Q ss_pred HHHHHHcCCCEEEE
Q 016179 331 AVELQLARLPCVVA 344 (394)
Q Consensus 331 tlEa~a~G~P~Iv~ 344 (394)
.+|++++|+|+|..
T Consensus 88 ~~e~~~~G~pvi~~ 101 (135)
T PF13692_consen 88 LLEAMAAGKPVIAS 101 (135)
T ss_dssp HHHHHCTT--EEEE
T ss_pred HHHHHHhCCCEEEC
Confidence 45999999998863
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0009 Score=67.92 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=73.8
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC---CEEEec
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV---PSILVP 306 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~---~v~~~~ 306 (394)
.|+++|||+|..+.+.+ .+. .++.|..++...++.+..|+-++++...+. .-++.+++.+.+.+. ++.+.+
T Consensus 275 ~R~~~gLp~d~vvF~~f--n~~---~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~ 348 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSF--NNL---FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSP 348 (468)
T ss_dssp ETGGGT--SSSEEEEE---S-G---GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE
T ss_pred CHHHcCCCCCceEEEec--Ccc---ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcC
Confidence 46789999987555543 443 345778888888888888999887776653 334555555555554 355543
Q ss_pred CCCcchHHHHHHHcccceehh----hHHHHHHHHcCCCEEEEEcCChHHHHHH-HhhccCCccchhhhhcCC
Q 016179 307 GGSSNLKYDAFSASRVALCTS----GTVAVELQLARLPCVVAYRAHFLTEWFI-RYKAKIPYISLPNILLDS 373 (394)
Q Consensus 307 g~~~~~~~~~~~~ADl~I~~S----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a-~~~vk~~~~~l~Nil~~~ 373 (394)
.....+.-..++.+|+++=.. ||+|+||+.+|+|+|. .++..+....+ ..+. ..|++++++..
T Consensus 349 ~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVT-l~G~~~~sR~~aSiL~---~lGl~ElIA~s 416 (468)
T PF13844_consen 349 VAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVT-LPGETMASRVGASILR---ALGLPELIADS 416 (468)
T ss_dssp ---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB----SSGGGSHHHHHHH---HHT-GGGB-SS
T ss_pred CCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEe-ccCCCchhHHHHHHHH---HcCCchhcCCC
Confidence 211234445678899998754 4566799999999774 55544333332 2222 56777777654
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.022 Score=59.24 Aligned_cols=42 Identities=10% Similarity=0.114 Sum_probs=34.3
Q ss_pred hHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 312 LKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.+++++.||+.|..| |-+.+||++||+|+|. .+.+.+..++
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~-t~~~gf~~~v 513 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSIT-TNLSGFGCFM 513 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEE-ccCcchhhhh
Confidence 4788999999999999 6777899999999886 6666664444
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00053 Score=58.12 Aligned_cols=137 Identities=15% Similarity=0.090 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEEecChhhH----hccCccccccCcceeccH---HHhhhhHHHHHHHHHHHHHHH--Hh
Q 016179 44 DSIGSRLMSAMKKLAPLPVSFSGVGGSMMS----EQGMKSLFPMEDIAVMGI---WELLPHIYKFRVRLKETIEAA--LL 114 (394)
Q Consensus 44 h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~----~~g~~~~~~~~~l~~~G~---~~~l~~~~~~~~~~~~~~~~i--~~ 114 (394)
-.+..+++++|.+++.+ ++++....+... ..+++. ..+++.+. ...+. .+..+.+++ ++
T Consensus 4 ~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~ 71 (160)
T PF13579_consen 4 ERYVRELARALAARGHE-VTVVTPQPDPEDDEEEEDGVRV----HRLPLPRRPWPLRLLR-------FLRRLRRLLAARR 71 (160)
T ss_dssp HHHHHHHHHHHHHTT-E-EEEEEE---GGG-SEEETTEEE----EEE--S-SSSGGGHCC-------HHHHHHHHCHHCT
T ss_pred HHHHHHHHHHHHHCCCE-EEEEecCCCCcccccccCCceE----EeccCCccchhhhhHH-------HHHHHHHHHhhhc
Confidence 44568899999998775 887776543222 122221 11211111 11222 223344555 78
Q ss_pred cCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccccc-C-cchH----H-HHHHHhhhheeecCcccHH
Q 016179 115 FRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWK-G-GEAR----L-KNLAAFVDHILCILPNEEA 187 (394)
Q Consensus 115 ~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~-~-g~~r----~-~~l~~~~d~v~~~~p~~~~ 187 (394)
.+||+|++.++ ....++..+++.. ++|++++. +..|... . ...+ . +++.+.+|.+++.++..++
T Consensus 72 ~~~Dvv~~~~~--~~~~~~~~~~~~~-----~~p~v~~~--h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 142 (160)
T PF13579_consen 72 ERPDVVHAHSP--TAGLVAALARRRR-----GIPLVVTV--HGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRR 142 (160)
T ss_dssp ---SEEEEEHH--HHHHHHHHHHHHH-----T--EEEE---SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHH
T ss_pred cCCeEEEeccc--chhHHHHHHHHcc-----CCcEEEEE--CCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHH
Confidence 89999998752 2333333333121 68976554 3322110 0 0001 1 2357789999999999999
Q ss_pred HHHhcCCC---eEEEcC
Q 016179 188 ICRLNGLA---ATFVGH 201 (394)
Q Consensus 188 ~~~~~g~~---~~~vG~ 201 (394)
.+.++|++ +.++.|
T Consensus 143 ~l~~~g~~~~ri~vipn 159 (160)
T PF13579_consen 143 YLRRYGVPPDRIHVIPN 159 (160)
T ss_dssp HHHHH---GGGEEE---
T ss_pred HHHHhCCCCCcEEEeCc
Confidence 99888765 445443
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0018 Score=62.58 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=71.8
Q ss_pred cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc--ChHHHHHHHhhcCCCCEEEecCCC-cchHHHHH
Q 016179 241 TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR--HVENYITGLIQKWPVPSILVPGGS-SNLKYDAF 317 (394)
Q Consensus 241 ~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~--~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~ 317 (394)
.+|.+. ||. -.++-.+.+++++.++.+++|+++|++.+.+.. ++++.+++. ..+.++.++ |.. -+++.++|
T Consensus 196 ~~ivv~--sRL-vyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~--~l~~rV~~l-G~v~h~~Vr~vl 269 (426)
T KOG1111|consen 196 ITIVVA--SRL-VYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKL--FLQDRVVML-GTVPHDRVRDVL 269 (426)
T ss_pred eEEEEE--eee-eeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHh--hccCceEEe-cccchHHHHHHH
Confidence 345444 776 235667889999999999999999999987642 233333322 123356665 322 46799999
Q ss_pred HHcccceehh-----hHHHHHHHHcCCCEEEEEcCCh
Q 016179 318 SASRVALCTS-----GTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 318 ~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
..-|+.+-.| |.+.+|||.||+|+|. .++++
T Consensus 270 ~~G~IFlntSlTEafc~~ivEAaScGL~VVs-TrVGG 305 (426)
T KOG1111|consen 270 VRGDIFLNTSLTEAFCMVIVEAASCGLPVVS-TRVGG 305 (426)
T ss_pred hcCcEEeccHHHHHHHHHHHHHHhCCCEEEE-eecCC
Confidence 9999999999 5666799999999886 44443
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.017 Score=63.24 Aligned_cols=106 Identities=21% Similarity=0.204 Sum_probs=63.8
Q ss_pred CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeE----EEEEeCCCc----ChHHHHHHHhhcC--------C---
Q 016179 239 GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELI----TVIHVAPNR----HVENYITGLIQKW--------P--- 299 (394)
Q Consensus 239 ~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~----~vi~~g~~~----~~~~~l~~~~~~~--------~--- 299 (394)
++++|+.+ +|-...| .++.+++|++.+.+++|+.+ ++.++++.. ++ +.+++.+.+. +
T Consensus 278 ~~~lIl~V--gRLd~~K-Gi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y-~~l~~~v~~l~g~In~~~g~~~ 353 (797)
T PLN03063 278 GRKVILGV--DRLDMIK-GIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEY-QKLKSQVHELVGRINGRFGSVS 353 (797)
T ss_pred CCeEEEEe--ccccccc-CHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHH-HHHHHHHHHHHHHhhcccccCC
Confidence 45555544 4554444 47888999999887778753 444444321 12 1222222211 1
Q ss_pred -CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCC---EEEEEcCC
Q 016179 300 -VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLP---CVVAYRAH 348 (394)
Q Consensus 300 -~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P---~Iv~y~~~ 348 (394)
..++++.++. .++..++|++||++|..| |.+.+|+++||+| ++|+....
T Consensus 354 ~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~ 412 (797)
T PLN03063 354 SVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA 412 (797)
T ss_pred CceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCc
Confidence 1233343221 467899999999999999 5677799999999 34345443
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.11 Score=49.96 Aligned_cols=154 Identities=11% Similarity=0.045 Sum_probs=87.6
Q ss_pred HHHHHHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEEC
Q 016179 168 LKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLP 247 (394)
Q Consensus 168 ~~~l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illlg 247 (394)
++++.+.+|.+.+-.+.+.+.+++.|+++.++.-|.... .. .+.. . ....+++.|++..
T Consensus 121 ~~~~l~~~~~i~vRD~~S~~~l~~~g~~i~~~~D~a~~l----~~------------~~~~---~--~~~~~~~~i~i~~ 179 (298)
T TIGR03609 121 VRRVLRGCRAISVRDAASYRLLKRLGIPAELAADPVWLL----PP------------EPWP---G--GEPLPEPVIVVSL 179 (298)
T ss_pred HHHHHccCCEEEEeCHHHHHHHHHhCCCceEeCChhhhC----CC------------Cccc---c--cccCCCCeEEEEE
Confidence 345677899999998989999988898887777665321 00 0000 0 0112345677654
Q ss_pred CCcHH-HHHhhHHHHHHHHHHhhhhCCCeEEEEEe-CCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHccccee
Q 016179 248 GSRLQ-EVARMLPIFAKTVELLKDSFPELITVIHV-APNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 325 (394)
Q Consensus 248 GSrg~-ei~~~l~~ll~a~~~l~~~~~~~~~vi~~-g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~ 325 (394)
-+... + ......+.+++..+.++. +.+++++. ..+.+ .+..++.......+..++.....+++.+.++.||++|+
T Consensus 180 r~~~~~~-~~~~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D-~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~ 256 (298)
T TIGR03609 180 RPWPLLD-VSRLLRLLRALDRLQRDT-GAFVLFLPFQQPQD-LPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIG 256 (298)
T ss_pred CCCCcCC-HHHHHHHHHHHHHHHHhh-CCeEEEEeCCcchh-HHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEE
Confidence 33211 1 112344566667765542 45554433 22222 22233332222212223322213567788999999999
Q ss_pred hhhHHHHHHHHcCCCEEEEE
Q 016179 326 TSGTVAVELQLARLPCVVAY 345 (394)
Q Consensus 326 ~SGt~tlEa~a~G~P~Iv~y 345 (394)
..==+++=|+..|+|+|.+.
T Consensus 257 ~RlH~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 257 MRLHALILAAAAGVPFVALS 276 (298)
T ss_pred echHHHHHHHHcCCCEEEee
Confidence 99777777999999999763
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=64.39 Aligned_cols=121 Identities=16% Similarity=0.189 Sum_probs=86.5
Q ss_pred CChHHHHhhcCCCCC--CcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCE
Q 016179 225 GNSEDFKNKYSVPSG--ATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302 (394)
Q Consensus 225 ~~~~~~r~~lgl~~~--~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v 302 (394)
.++..+++++|++.+ .|.+.+. ||-.+ -+-+..+++++..+.+. ..|+++.+.+...+++.+....+.+..++
T Consensus 277 ~nk~~L~~~~gL~~~~~~pl~~~v--sRl~~-QKG~dl~~~~i~~~l~~--~~~~vilG~gd~~le~~~~~la~~~~~~~ 351 (487)
T COG0297 277 ENKVALQERLGLDVDLPGPLFGFV--SRLTA-QKGLDLLLEAIDELLEQ--GWQLVLLGTGDPELEEALRALASRHPGRV 351 (487)
T ss_pred HHHHHHHHHhCCCCCCCCcEEEEe--ecccc-ccchhHHHHHHHHHHHh--CceEEEEecCcHHHHHHHHHHHHhcCceE
Confidence 356677789999954 4555554 67655 34578888999988764 38888888776667666666655555455
Q ss_pred EEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHH
Q 016179 303 ILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 303 ~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
.+..+|...-....++.||+++..| |.+.+++|..|++-|+ .+++++.
T Consensus 352 ~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv-~~tGGLa 404 (487)
T COG0297 352 LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIV-RETGGLA 404 (487)
T ss_pred EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceE-cccCCcc
Confidence 5555553334668899999999999 8888999999996664 6666543
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0046 Score=52.63 Aligned_cols=114 Identities=9% Similarity=-0.000 Sum_probs=67.2
Q ss_pred cEEEEECCCcHHH--HHhh-HHHHHHHHHHhhhhCCCeEEEEEeCCCc-ChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 241 TVISLLPGSRLQE--VARM-LPIFAKTVELLKDSFPELITVIHVAPNR-HVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 241 ~~IlllgGSrg~e--i~~~-l~~ll~a~~~l~~~~~~~~~vi~~g~~~-~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
.++.+.-|+-.-+ |+.. -+ +..+.|.+ +.-.++++..|.+. -..+.........++.+..+.+ .+.+.+.
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~---~~~~~L~k-~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f--~psl~e~ 77 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSE---EFLQELQK-RGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDF--SPSLTED 77 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCH---HHHHHHHH-cCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEec--CccHHHH
Confidence 3566777776532 2211 12 22333432 33467888888651 1222222222233444444433 6789999
Q ss_pred HHHcccceehhhHHHH-HHHHcCCCEEEEEcC---ChHHHHHHHhhcc
Q 016179 317 FSASRVALCTSGTVAV-ELQLARLPCVVAYRA---HFLTEWFIRYKAK 360 (394)
Q Consensus 317 ~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~---~~~~~~~a~~~vk 360 (394)
++.||++|+-+|+.|. |.+..|+|.|++..- +..-.-+|+.+..
T Consensus 78 I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~ 125 (170)
T KOG3349|consen 78 IRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE 125 (170)
T ss_pred HhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh
Confidence 9999999999999887 999999999987543 3333334655543
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0029 Score=54.49 Aligned_cols=146 Identities=13% Similarity=0.081 Sum_probs=70.2
Q ss_pred chHHHHHHHHHHHHHhcCCCCeEEEEecChh-hHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHhcCCCE
Q 016179 41 VSGDSIGSRLMSAMKKLAPLPVSFSGVGGSM-MSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHA 119 (394)
Q Consensus 41 ~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~-m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~~~PD~ 119 (394)
+|...++..++++|.+++.+ +.++..+... ......... . . ... ...+.....+....++.+.+++.+||+
T Consensus 12 GG~e~~~~~l~~~l~~~G~~-v~v~~~~~~~~~~~~~~~~~-~--~---~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Di 83 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHE-VTVVSPGVKDPIEEELVKIF-V--K---IPY-PIRKRFLRSFFFMRRLRRLIKKEKPDI 83 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-E-EEEEESS-TTS-SSTEEEE---------TT--SSTSS--HHHHHHHHHHHHHHHHT-SE
T ss_pred ChHHHHHHHHHHHHHHCCCE-EEEEEcCCCccchhhcccee-e--e---eec-ccccccchhHHHHHHHHHHHHHcCCCe
Confidence 44577799999999998774 7777655432 211100000 0 0 000 001111122233456778888999999
Q ss_pred EEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccc----c--cCcc-hH-----HHHHHHhhhheeecCcccHH
Q 016179 120 VVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA----W--KGGE-AR-----LKNLAAFVDHILCILPNEEA 187 (394)
Q Consensus 120 Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa----~--~~g~-~r-----~~~l~~~~d~v~~~~p~~~~ 187 (394)
|++.+++.+.....+. + ++|++.. .|..|. + ..+. .. .+++.+.+|.+++.+++.++
T Consensus 84 Vh~~~~~~~~~~~~~~-~--------~~~~v~~--~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~ 152 (177)
T PF13439_consen 84 VHIHGPPAFWIALLAC-R--------KVPIVYT--IHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKD 152 (177)
T ss_dssp EECCTTHCCCHHHHHH-H--------CSCEEEE--E-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHH
T ss_pred EEecccchhHHHHHhc-c--------CCCEEEE--eCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHH
Confidence 9765543232222222 1 3575322 233331 0 0000 01 11235679999999999999
Q ss_pred HHHhcCCC---eEEEcCCCch
Q 016179 188 ICRLNGLA---ATFVGHPVVE 205 (394)
Q Consensus 188 ~~~~~g~~---~~~vG~Pv~~ 205 (394)
.+.++|++ +.++-|++..
T Consensus 153 ~l~~~~~~~~ki~vI~ngid~ 173 (177)
T PF13439_consen 153 ELIKFGIPPEKIHVIYNGIDT 173 (177)
T ss_dssp HHHHHT--SS-EEE----B-C
T ss_pred HHHHhCCcccCCEEEECCccH
Confidence 98888864 5666666543
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.015 Score=48.73 Aligned_cols=79 Identities=10% Similarity=0.053 Sum_probs=48.5
Q ss_pred eEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChh--h-HhccCccccccCcceeccHHHhhhhHHHHHHHHHHHH
Q 016179 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSM--M-SEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETI 109 (394)
Q Consensus 33 kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~--m-~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~ 109 (394)
||++++...++|.+ .++++|++++.+ +.++...++. . ...++... .++. + .+......+ +.++.
T Consensus 1 KIl~i~~~~~~~~~--~~~~~L~~~g~~-V~ii~~~~~~~~~~~~~~i~~~----~~~~-~----~k~~~~~~~-~~~l~ 67 (139)
T PF13477_consen 1 KILLIGNTPSTFIY--NLAKELKKRGYD-VHIITPRNDYEKYEIIEGIKVI----RLPS-P----RKSPLNYIK-YFRLR 67 (139)
T ss_pred CEEEEecCcHHHHH--HHHHHHHHCCCE-EEEEEcCCCchhhhHhCCeEEE----EecC-C----CCccHHHHH-HHHHH
Confidence 68888888877654 788889887664 8877775432 1 23333221 1110 0 111122233 34788
Q ss_pred HHHHhcCCCEEEEeC
Q 016179 110 EAALLFRPHAVVTVD 124 (394)
Q Consensus 110 ~~i~~~~PD~Vi~~~ 124 (394)
+++++++||+|++.+
T Consensus 68 k~ik~~~~DvIh~h~ 82 (139)
T PF13477_consen 68 KIIKKEKPDVIHCHT 82 (139)
T ss_pred HHhccCCCCEEEEec
Confidence 999999999999875
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.29 Score=45.19 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=79.7
Q ss_pred HHHHHHhhhheeecCcccHHHHHhcCC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEE
Q 016179 168 LKNLAAFVDHILCILPNEEAICRLNGL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISL 245 (394)
Q Consensus 168 ~~~l~~~~d~v~~~~p~~~~~~~~~g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Ill 245 (394)
.+++.+.+|.+.+-.+.+.+.+.+.|+ ++.+++-|..- +... ........ .....+.+
T Consensus 121 ~~~~l~~~~~i~vRD~~S~~~l~~~g~~~~~~~~~D~af~-l~~~---------------~~~~~~~~----~~~~~~~~ 180 (286)
T PF04230_consen 121 LRRILSKADYISVRDEYSYELLKKLGISGNVKLVPDPAFL-LPPS---------------YPDEDKSK----PKRNYISV 180 (286)
T ss_pred HHHHHhCCCEEEECCHHHHHHHHHcCCCCCcEEEeCchhh-cCcc---------------cccccccc----cccceeee
Confidence 345566688899988888888888898 78888888641 1100 00000000 11112222
Q ss_pred ECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc-ChHHHHHHHh--hcCCCCEEEecC-CCcchHHHHHHHcc
Q 016179 246 LPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR-HVENYITGLI--QKWPVPSILVPG-GSSNLKYDAFSASR 321 (394)
Q Consensus 246 lgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~-~~~~~l~~~~--~~~~~~v~~~~g-~~~~~~~~~~~~AD 321 (394)
...+.. .-+.....+.+.+..+.+......++....... .......... .....++..... ....+..++++.+|
T Consensus 181 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (286)
T PF04230_consen 181 SNSPSR-NNEEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQAD 259 (286)
T ss_pred ccccch-hhhhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCC
Confidence 222221 111122334445555554322333333332211 1111111111 111112333322 11467889999999
Q ss_pred cceehhhHHHHHHHHcCCCEEEE
Q 016179 322 VALCTSGTVAVELQLARLPCVVA 344 (394)
Q Consensus 322 l~I~~SGt~tlEa~a~G~P~Iv~ 344 (394)
++|+..==+++=|+++|+|+|.+
T Consensus 260 ~~Is~RlH~~I~a~~~g~P~i~i 282 (286)
T PF04230_consen 260 LVISMRLHGAILALSLGVPVIAI 282 (286)
T ss_pred EEEecCCHHHHHHHHcCCCEEEE
Confidence 99999966666789999999976
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.45 Score=48.80 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=61.5
Q ss_pred CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 237 PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
.+++++|.+.-||...--.+.+..+.++++. .+..|+++..+.. .. +.+... .+..+. +.. .-.++
T Consensus 271 ~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~-----~~~~~lw~~~~~~--~~-~~~~~~---~~~~v~-~w~--pQ~~i 336 (459)
T PLN02448 271 QPEGSVLYVSLGSFLSVSSAQMDEIAAGLRD-----SGVRFLWVARGEA--SR-LKEICG---DMGLVV-PWC--DQLKV 336 (459)
T ss_pred CCCCceEEEeecccccCCHHHHHHHHHHHHh-----CCCCEEEEEcCch--hh-HhHhcc---CCEEEe-ccC--CHHHH
Confidence 3456789998888743111123334444433 2467887654321 11 222221 134444 221 34568
Q ss_pred HHHccc--ceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 317 FSASRV--ALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 317 ~~~ADl--~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
++..++ +|+=.|..|. |++.+|+|+|+ .+...--+..++++++
T Consensus 337 L~h~~v~~fvtHgG~nS~~eal~~GvP~l~-~P~~~DQ~~na~~v~~ 382 (459)
T PLN02448 337 LCHSSVGGFWTHCGWNSTLEAVFAGVPMLT-FPLFWDQPLNSKLIVE 382 (459)
T ss_pred hccCccceEEecCchhHHHHHHHcCCCEEe-ccccccchhhHHHHHH
Confidence 877776 9999997665 99999999986 5554444444666653
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=54.26 Aligned_cols=111 Identities=14% Similarity=0.103 Sum_probs=59.5
Q ss_pred CCCCcEEEEECCCcHHHHHhhHH--HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEEecCCCcchH
Q 016179 237 PSGATVISLLPGSRLQEVARMLP--IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGSSNLK 313 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~ei~~~l~--~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~~~g~~~~~~ 313 (394)
..+++.|++.||+... .+..| .+.+.++.|.+. ..++++.+++.+..++..+...+.... .+.+.......+.
T Consensus 102 ~~~~~~i~i~~~a~~~--~k~wp~e~~~~l~~~l~~~--~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~ 177 (247)
T PF01075_consen 102 SKDKPYIGINPGASWP--SKRWPAEKWAELIERLKER--GYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLREL 177 (247)
T ss_dssp -TTSSEEEEE---SSG--GGS--HHHHHHHHHHHCCC--T-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHH
T ss_pred hccCCeEEEeecCCCc--cccCCHHHHHHHHHHHHhh--CceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHH
Confidence 3567889999998873 22334 366677777654 267777776533122333333332221 2333321114677
Q ss_pred HHHHHHcccceehhhHHHHHHHHcCCCEEEEEcCChHH
Q 016179 314 YDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 314 ~~~~~~ADl~I~~SGt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
..+++.||++|+.-.+.+==|+++|+|+|.+|......
T Consensus 178 ~ali~~a~~~I~~Dtg~~HlA~a~~~p~v~lfg~t~~~ 215 (247)
T PF01075_consen 178 AALISRADLVIGNDTGPMHLAAALGTPTVALFGPTNPE 215 (247)
T ss_dssp HHHHHTSSEEEEESSHHHHHHHHTT--EEEEESSS-HH
T ss_pred HHHHhcCCEEEecCChHHHHHHHHhCCEEEEecCCCHH
Confidence 88999999999977555434999999999888555433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.69 Score=45.03 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=45.1
Q ss_pred CCeEEEEEeC-CCcChHHHHHHH---hhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCE
Q 016179 273 PELITVIHVA-PNRHVENYITGL---IQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPC 341 (394)
Q Consensus 273 ~~~~~vi~~g-~~~~~~~~l~~~---~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~ 341 (394)
++++++++++ .|++.+++++.+ ...+.+ ++.+...-..++.-+++..|-+.|-.= |-+.+|.||+|+=.
T Consensus 304 ~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIp 383 (465)
T KOG1387|consen 304 SPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIP 383 (465)
T ss_pred CCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceE
Confidence 4577777776 233333343322 222222 344432111467888888887777654 78888999999977
Q ss_pred EEEEcCCh
Q 016179 342 VVAYRAHF 349 (394)
Q Consensus 342 Iv~y~~~~ 349 (394)
|+-.-.++
T Consensus 384 i~h~SgGP 391 (465)
T KOG1387|consen 384 IVHNSGGP 391 (465)
T ss_pred EEeCCCCC
Confidence 76433333
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0097 Score=53.39 Aligned_cols=146 Identities=15% Similarity=0.160 Sum_probs=64.9
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC----hhhHhccCccccccCcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG----SMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg----~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
..|.|=+.+ -|.+. +..|+++|++.+|+ ..++-... ..+.+..+... .......+ +. -.
T Consensus 22 ~~iWiHa~S-vGE~~a~~~Li~~l~~~~p~-~~illT~~T~tg~~~~~~~~~~~---v~~~~~P~-D~----------~~ 85 (186)
T PF04413_consen 22 PLIWIHAAS-VGEVNAARPLIKRLRKQRPD-LRILLTTTTPTGREMARKLLPDR---VDVQYLPL-DF----------PW 85 (186)
T ss_dssp T-EEEE-SS-HHHHHHHHHHHHHHTT---T-S-EEEEES-CCHHHHHHGG-GGG----SEEE----SS----------HH
T ss_pred CcEEEEECC-HHHHHHHHHHHHHHHHhCCC-CeEEEEecCCchHHHHHHhCCCC---eEEEEeCc-cC----------HH
Confidence 345555544 47777 77899999998886 76554332 22222211110 00000000 11 01
Q ss_pred HHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEee-----cCccccccCcchHHHHHHHhhhheeec
Q 016179 107 ETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYV-----APSFWAWKGGEARLKNLAAFVDHILCI 181 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv-----~~~~wa~~~g~~r~~~l~~~~d~v~~~ 181 (394)
-+.+.++..+||++|.+...-.| .+...++++ ++|+++--- +...|.|.++ ..+.+-+..|.+++.
T Consensus 86 ~~~rfl~~~~P~~~i~~EtElWP-nll~~a~~~------~ip~~LvNarls~~s~~~~~~~~~--~~r~~l~~f~~i~aq 156 (186)
T PF04413_consen 86 AVRRFLDHWRPDLLIWVETELWP-NLLREAKRR------GIPVVLVNARLSERSFRRYRRFPF--LFRPLLSRFDRILAQ 156 (186)
T ss_dssp HHHHHHHHH--SEEEEES----H-HHHHH-----------S-EEEEEE--------------H--HHHHHGGG-SEEEES
T ss_pred HHHHHHHHhCCCEEEEEccccCH-HHHHHHhhc------CCCEEEEeeeeccccchhhhhhHH--HHHHHHHhCCEEEEC
Confidence 13466778899999999753334 344455554 789643210 1112333221 233455668999999
Q ss_pred CcccHHHHHhcCCC---eEEEcCC
Q 016179 182 LPNEEAICRLNGLA---ATFVGHP 202 (394)
Q Consensus 182 ~p~~~~~~~~~g~~---~~~vG~P 202 (394)
++...+.|.+.|++ +.++||-
T Consensus 157 s~~da~r~~~lG~~~~~v~v~Gnl 180 (186)
T PF04413_consen 157 SEADAERFRKLGAPPERVHVTGNL 180 (186)
T ss_dssp SHHHHHHHHTTT-S--SEEE---G
T ss_pred CHHHHHHHHHcCCCcceEEEeCcc
Confidence 99999999999986 7889974
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.025 Score=58.24 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=74.3
Q ss_pred HHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCCc----C---hHHHHHHHhh
Q 016179 228 EDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPNR----H---VENYITGLIQ 296 (394)
Q Consensus 228 ~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~~----~---~~~~l~~~~~ 296 (394)
+++|++++ ++++|+-. +|-...|. ++..++|++++.+++|+ +.++.++.++. + +.+.+++...
T Consensus 276 ~~lr~~~~---~~kiIl~V--DRLDy~KG-I~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~ 349 (487)
T TIGR02398 276 ERIRSELA---GVKLILSA--ERVDYTKG-ILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVG 349 (487)
T ss_pred HHHHHHcC---CceEEEEe--cccccccC-HHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHH
Confidence 45677776 45555433 67655554 67788999998888886 57777776531 1 2222333222
Q ss_pred c----CC----CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCC----CEEEEEcCChHH
Q 016179 297 K----WP----VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARL----PCVVAYRAHFLT 351 (394)
Q Consensus 297 ~----~~----~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~----P~Iv~y~~~~~~ 351 (394)
. ++ .++.++.++. .++...+|++||+++..| +.++.|.++|+. |.|+ ....+..
T Consensus 350 ~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLIL-SefaGaa 421 (487)
T TIGR02398 350 RINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVL-SEFAGAA 421 (487)
T ss_pred HHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEE-eccccch
Confidence 1 11 1355554443 577889999999999999 456679999988 5444 5554433
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.017 Score=54.80 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=54.9
Q ss_pred HHHHHHHHhhhhCCCeEEEEEeCCCcC---hHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHH
Q 016179 260 IFAKTVELLKDSFPELITVIHVAPNRH---VENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQL 336 (394)
Q Consensus 260 ~ll~a~~~l~~~~~~~~~vi~~g~~~~---~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a 336 (394)
.+.+.++.+.+..|+.++++=.+|... ....+.+... ..++.++.. .-++++++..||.++|-++|+-+||++
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~Ll~~s~~VvtinStvGlEAll 216 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN--LPNVVIIDD--DVNLYELLEQSDAVVTINSTVGLEALL 216 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc--CCCeEEECC--CCCHHHHHHhCCEEEEECCHHHHHHHH
Confidence 355566666666788998887776211 1122222111 123444433 247999999999999999999999999
Q ss_pred cCCCEEEE
Q 016179 337 ARLPCVVA 344 (394)
Q Consensus 337 ~G~P~Iv~ 344 (394)
.|+|+++.
T Consensus 217 ~gkpVi~~ 224 (269)
T PF05159_consen 217 HGKPVIVF 224 (269)
T ss_pred cCCceEEe
Confidence 99999875
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.03 Score=57.47 Aligned_cols=116 Identities=11% Similarity=0.188 Sum_probs=73.1
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCC-CcChHHHHHHHhhcCCC---CEEEe
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAP-NRHVENYITGLIQKWPV---PSILV 305 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~-~~~~~~~l~~~~~~~~~---~v~~~ 305 (394)
.|+++|+|+|..|.+.+ ..... +.|.+.+.--+|.+..|+-.+++-+++ +++..+.++...+..|+ +.++.
T Consensus 420 sR~~lglp~~avVf~c~--~n~~K---~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~ 494 (620)
T COG3914 420 SRAQLGLPEDAVVFCCF--NNYFK---ITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFL 494 (620)
T ss_pred chhhcCCCCCeEEEEec--CCccc---CCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeec
Confidence 45789999886544443 33322 345555544455556688777666653 34455666766666554 35555
Q ss_pred cCCCcchHHHHHHHcccceehh---hH-HHHHHHHcCCCEEEEEcCChHH
Q 016179 306 PGGSSNLKYDAFSASRVALCTS---GT-VAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 306 ~g~~~~~~~~~~~~ADl~I~~S---Gt-~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
+....+++.+-+.-||+++=.= |+ +++|++-+|+|++ +..+..+-
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVl-T~~G~~Fa 543 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVL-TRVGEQFA 543 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCCccchHHHHHhcCcee-eeccHHHH
Confidence 4433566778899999999753 44 4459999999977 45554443
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.12 E-value=1.2 Score=46.10 Aligned_cols=112 Identities=14% Similarity=-0.002 Sum_probs=60.0
Q ss_pred CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcCh-------HHHHHHHhhcCCCCEEEecCCC
Q 016179 237 PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHV-------ENYITGLIQKWPVPSILVPGGS 309 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~-------~~~l~~~~~~~~~~v~~~~g~~ 309 (394)
.+++.+|.+.=||...--. +.+.+.+..|.. .+..|+++...+... -+-+++... +.++.+. +.
T Consensus 282 ~~~~svvyvsfGS~~~~~~---~~~~~~~~~l~~--~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~-~w- 352 (482)
T PLN03007 282 KKPDSVIYLSFGSVASFKN---EQLFEIAAGLEG--SGQNFIWVVRKNENQGEKEEWLPEGFEERTK--GKGLIIR-GW- 352 (482)
T ss_pred CCCCceEEEeecCCcCCCH---HHHHHHHHHHHH--CCCCEEEEEecCCcccchhhcCCHHHHHHhc--cCCEEEe-cC-
Confidence 3456688887777642111 223333333433 246788877642110 001111111 2234433 22
Q ss_pred cchHHHHHHHccc--ceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 310 SNLKYDAFSASRV--ALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 310 ~~~~~~~~~~ADl--~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
. .-.++++.+++ +|+=.|..++ |++.+|+|+|+ .+...--+.-+++++
T Consensus 353 ~-PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~-~P~~~DQ~~na~~~~ 403 (482)
T PLN03007 353 A-PQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVT-WPVGAEQFYNEKLVT 403 (482)
T ss_pred C-CHHHHhccCccceeeecCcchHHHHHHHcCCCeee-ccchhhhhhhHHHHH
Confidence 1 23578888765 9999997665 99999999986 454433333356544
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=96.08 E-value=1.7 Score=43.17 Aligned_cols=155 Identities=10% Similarity=0.018 Sum_probs=76.7
Q ss_pred HHHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 171 LAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
..+.|..+.+-.|.+.+.++..|+++..+.-|...-... . .+.. .. ......+++++.. |
T Consensus 149 ~~~~~s~i~vRD~~S~~llk~~gi~a~l~~D~Af~L~~~---~-----------~~~~---~~-~~~~~~~~~~i~l--r 208 (385)
T COG2327 149 VLGGCSAISVRDPVSYELLKQLGINARLVTDPAFLLPAS---S-----------QNAT---AS-DVEAREKTVAITL--R 208 (385)
T ss_pred HhcCCcEEEEecHHhHHHHHHcCCCeEeecCcceecccc---c-----------cccc---cc-ccccccceEEEEe--c
Confidence 456678888888999999999999988776554332110 0 0000 00 0112334555542 2
Q ss_pred H-----HHHHhhHHHHHHHHHHh-hhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHccc
Q 016179 251 L-----QEVARMLPIFAKTVELL-KDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRV 322 (394)
Q Consensus 251 g-----~ei~~~l~~ll~a~~~l-~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl 322 (394)
+ ..-..++...-+++..+ .+......+......+.+.....+.+..... .++++..+...+++...++.+|+
T Consensus 209 ~~~~~~t~~~~~~~~v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl 288 (385)
T COG2327 209 GLHPDNTAQRSILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDL 288 (385)
T ss_pred ccCCchhhhHHHHHHHHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCce
Confidence 2 00000112222333332 1111233333333222222222233322221 24554443201345668899999
Q ss_pred ceehhhHHHHHHHHcCCCEEEEE
Q 016179 323 ALCTSGTVAVELQLARLPCVVAY 345 (394)
Q Consensus 323 ~I~~SGt~tlEa~a~G~P~Iv~y 345 (394)
+|+.==-+++=++++|+|+|.++
T Consensus 289 ~Vg~R~HsaI~al~~g~p~i~i~ 311 (385)
T COG2327 289 IVGMRLHSAIMALAFGVPAIAIA 311 (385)
T ss_pred EEeehhHHHHHHHhcCCCeEEEe
Confidence 88765556667999999999773
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.027 Score=61.20 Aligned_cols=100 Identities=22% Similarity=0.227 Sum_probs=61.6
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCC----cC---hHHHHHHHhhc----CC---
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPN----RH---VENYITGLIQK----WP--- 299 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~----~~---~~~~l~~~~~~----~~--- 299 (394)
+++++|+.+ +|-...| .++.+++|++.+.+.+|+ +++++++++. ++ +++.+++...+ ++
T Consensus 263 ~~~~~il~V--gRl~~~K-gi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~ 339 (726)
T PRK14501 263 RGRKIILSI--DRLDYTK-GIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVD 339 (726)
T ss_pred CCCEEEEEe--cCccccc-CHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 345555544 4655444 478889999998777775 5777775432 11 12222222111 11
Q ss_pred -CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCC
Q 016179 300 -VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLP 340 (394)
Q Consensus 300 -~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P 340 (394)
.++.++.++. .+++.++|++||+++..| |.+.+|+++||+|
T Consensus 340 ~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~ 387 (726)
T PRK14501 340 WTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD 387 (726)
T ss_pred cceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCC
Confidence 1244443332 578999999999999999 5566799999775
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.15 Score=53.10 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=62.9
Q ss_pred CcEEEEECCCcHH--HH-HhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 240 ATVISLLPGSRLQ--EV-ARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 240 ~~~IlllgGSrg~--ei-~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
+++|++.-||-.. .. .+.+..++++++.+ + .++++..++.. . . .+.+.++.+.... .-.++
T Consensus 296 ~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~-~-~------~~~p~Nv~i~~w~---Pq~~l 359 (507)
T PHA03392 296 NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEV-E-A------INLPANVLTQKWF---PQRAV 359 (507)
T ss_pred CcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCc-C-c------ccCCCceEEecCC---CHHHH
Confidence 3688888888532 11 22345566666543 3 57888776421 1 1 1123356655321 34577
Q ss_pred H--HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 317 F--SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 317 ~--~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
+ ..+|++|+=.|..|+ ||+.+|+|+|++ +.-.--+.-|+++.
T Consensus 360 L~hp~v~~fItHGG~~s~~Eal~~GvP~v~i-P~~~DQ~~Na~rv~ 404 (507)
T PHA03392 360 LKHKNVKAFVTQGGVQSTDEAIDALVPMVGL-PMMGDQFYNTNKYV 404 (507)
T ss_pred hcCCCCCEEEecCCcccHHHHHHcCCCEEEC-CCCccHHHHHHHHH
Confidence 8 569999999998887 999999999975 44333333455554
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.67 E-value=3 Score=42.67 Aligned_cols=117 Identities=13% Similarity=-0.019 Sum_probs=61.5
Q ss_pred hhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCC---cChH----HHHHHHhhcCCCCEEE
Q 016179 232 NKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPN---RHVE----NYITGLIQKWPVPSIL 304 (394)
Q Consensus 232 ~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~---~~~~----~~l~~~~~~~~~~v~~ 304 (394)
+=|+-.++..+|.+.=||...-- -..+.+.+..|.. .+..|+++.-+. .+.. +-+++..++-+ .+
T Consensus 244 ~WLD~q~~~sVvyvsfGS~~~~~---~~q~~e~a~gL~~--s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g---~v 315 (446)
T PLN00414 244 HWLNGFEPGSVVFCAFGTQFFFE---KDQFQEFCLGMEL--TGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRG---IV 315 (446)
T ss_pred HHHhcCCCCceEEEeecccccCC---HHHHHHHHHHHHH--cCCCeEEEEecCCCcccchhhCChhHHHHhcCCC---eE
Confidence 33444456679999778876311 1234455554443 244555554221 0100 11122222222 22
Q ss_pred ecCCCcchHHHHHHHc--ccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 305 VPGGSSNLKYDAFSAS--RVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~A--Dl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
+.++. .-.++++.. +++||=.|-.+. |++.+|+|+|. .+...--+..+++++
T Consensus 316 v~~w~--PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~-~P~~~dQ~~na~~~~ 370 (446)
T PLN00414 316 WEGWV--EQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVF-IPQLADQVLITRLLT 370 (446)
T ss_pred EeccC--CHHHHhcCCccceEEecCchhHHHHHHHcCCCEEe-cCcccchHHHHHHHH
Confidence 32321 235688666 779999997665 99999999986 455433333455553
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.89 E-value=4.2 Score=39.81 Aligned_cols=301 Identities=15% Similarity=0.147 Sum_probs=140.1
Q ss_pred CceE-EEEeCC--chHHH--HHHHHHHHHHhcCCCCeEEEEecCh-hhHhccCc---cccccCcceeccHH-H----hhh
Q 016179 31 ELRV-FIVAGE--VSGDS--IGSRLMSAMKKLAPLPVSFSGVGGS-MMSEQGMK---SLFPMEDIAVMGIW-E----LLP 96 (394)
Q Consensus 31 ~~kI-lI~aG~--~sGh~--~a~~l~~~L~~~~~~~~~~~g~gg~-~m~~~g~~---~~~~~~~l~~~G~~-~----~l~ 96 (394)
++++ +++-|. .|=-+ ||..+++ .+-+ ++++|.+++ ..++..-. .++.+..+++.+.. . .+|
T Consensus 12 k~ra~vvVLGDvGRSPRMqYHA~Sla~----~gf~-VdliGy~~s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~lK 86 (444)
T KOG2941|consen 12 KKRAIVVVLGDVGRSPRMQYHALSLAK----LGFQ-VDLIGYVESIPLEELLNHPRIRIHGMPNLPFLQGGPRVLFLPLK 86 (444)
T ss_pred cceEEEEEecccCCChHHHHHHHHHHH----cCCe-EEEEEecCCCChHHHhcCCceEEEeCCCCcccCCCchhhhhHHH
Confidence 3444 445555 33333 3666654 2343 889988764 22221111 12344444443322 1 222
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC--c-cccccCcc--------
Q 016179 97 HIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP--S-FWAWKGGE-------- 165 (394)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~--~-~wa~~~g~-------- 165 (394)
.+..+... +..++....||.++.---|+.|..+++.+-.... +.+.+++.+.- + .-+...|+
T Consensus 87 vf~Qfl~L---l~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~----~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~ 159 (444)
T KOG2941|consen 87 VFWQFLSL---LWALFVLRPPDIILVQNPPSIPTLIVCVLYSILT----GAKFIIDWHNYGYSLQLKLKLGFQHPLVRLV 159 (444)
T ss_pred HHHHHHHH---HHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHh----cceEEEEehhhHHHHHHHhhcCCCCchHHHH
Confidence 22222222 2233345678877755457777766665543211 45656664211 0 00111110
Q ss_pred hHHHH-HHHhhhheeecCcccHHHH-HhcCC-CeEEE-------cCCCch---hhhhhcCC----CCCCCcccccCCChH
Q 016179 166 ARLKN-LAAFVDHILCILPNEEAIC-RLNGL-AATFV-------GHPVVE---DCLELNLG----KGPEPCELKMEGNSE 228 (394)
Q Consensus 166 ~r~~~-l~~~~d~v~~~~p~~~~~~-~~~g~-~~~~v-------G~Pv~~---~~~~~~~~----~~~~~~~~~~~~~~~ 228 (394)
++..+ +.|.+|.-+|+....++.+ ++.|+ ++.++ +.|+.. .|.....+ +.+. .+- ...++.
T Consensus 160 ~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~-~q~-~~~~~t 237 (444)
T KOG2941|consen 160 RWLEKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRARE-PQD-KALERT 237 (444)
T ss_pred HHHHHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcc-ccc-chhhhh
Confidence 01122 3778888889988888665 56785 44322 222211 11110000 0000 000 000111
Q ss_pred HHHhhc-----CCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh-------CCCeEEEEEeCCCcChHHHHHHHhh
Q 016179 229 DFKNKY-----SVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS-------FPELITVIHVAPNRHVENYITGLIQ 296 (394)
Q Consensus 229 ~~r~~l-----gl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~-------~~~~~~vi~~g~~~~~~~~l~~~~~ 296 (394)
.+-++. ...++.|.+++.--|-... +-...+++|+....++ .|++ +.+++|..+.-+.+ .+.+.
T Consensus 238 af~~k~~s~~v~~~~~~pallvsSTswTpD--Edf~ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlkE~Y-~~~I~ 313 (444)
T KOG2941|consen 238 AFTKKDASGDVQLLPERPALLVSSTSWTPD--EDFGILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLKEKY-SQEIH 313 (444)
T ss_pred hHhhhcccchhhhccCCCeEEEecCCCCCc--ccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcCCCchhHHH-HHHHH
Confidence 111222 2234667788864444321 1245677777733211 2333 35566655533333 33344
Q ss_pred cCCC-CEEEecCCC-cchHHHHHHHccccee----hhhH---H-HHHHHHcCCCEEEEEcCChH
Q 016179 297 KWPV-PSILVPGGS-SNLKYDAFSASRVALC----TSGT---V-AVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 297 ~~~~-~v~~~~g~~-~~~~~~~~~~ADl~I~----~SGt---~-tlEa~a~G~P~Iv~y~~~~~ 350 (394)
+.+. ++.+..... .+|-+.+++.||+.|| .||. + .+..-.||+|++. +....+
T Consensus 314 ~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA-~~fkcl 376 (444)
T KOG2941|consen 314 EKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-VNFKCL 376 (444)
T ss_pred HhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceee-ecchhH
Confidence 3332 344331110 4688999999999998 4564 3 3488999999775 443333
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.48 Score=44.15 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=65.5
Q ss_pred cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCc-chHHHHH
Q 016179 241 TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSS-NLKYDAF 317 (394)
Q Consensus 241 ~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~-~~~~~~~ 317 (394)
..++.+| |-.+. +..+.+++++..+....++.++++++..... .+.+.....+.. .++.+. |+.. +++.+++
T Consensus 200 ~~i~~~g--~~~~~-k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~~~ 274 (381)
T COG0438 200 FVVLYVG--RLDPE-KGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFL-GYVPDEELAELL 274 (381)
T ss_pred eEEEEee--ccChh-cCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEe-cccCHHHHHHHH
Confidence 4555553 33232 3467788888888766555777777765431 112233333332 245553 4322 4788899
Q ss_pred HHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 318 SASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 318 ~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.||+++..| |...+|++++|+|+|. ...+.....+
T Consensus 275 ~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~-~~~~~~~e~~ 315 (381)
T COG0438 275 ASADVFVLPSLSEGFGLVLLEAMAAGTPVIA-SDVGGIPEVV 315 (381)
T ss_pred HhCCEEEeccccccchHHHHHHHhcCCcEEE-CCCCChHHHh
Confidence 9999999995 3455699999999875 5554444333
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.37 E-value=6.9 Score=40.00 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=27.1
Q ss_pred CceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEE
Q 016179 31 ELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSG 66 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g 66 (394)
+..|++..--..||+. ...+++.|..++.. ++|+.
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~-VT~vt 39 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHR-VTFLL 39 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCE-EEEEe
Confidence 4568888888889999 88999999877543 55544
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.58 Score=45.06 Aligned_cols=108 Identities=8% Similarity=-0.013 Sum_probs=66.0
Q ss_pred EECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCC---CcChHHHHHHHhhc-CC-CCEEEecCCC-cchHHHHHH
Q 016179 245 LLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAP---NRHVENYITGLIQK-WP-VPSILVPGGS-SNLKYDAFS 318 (394)
Q Consensus 245 llgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~---~~~~~~~l~~~~~~-~~-~~v~~~~g~~-~~~~~~~~~ 318 (394)
++-|..|..-|+++. +++++.+.. ..+++++++.+- |..+.+.+++...+ .+ .++.++..+- .+|--++++
T Consensus 149 IlvGNSgd~SN~Hie-~L~~l~~~~--~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 149 ILVGNSGDRSNRHIE-ALRALHQQF--GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred EEEeCCCCCcccHHH-HHHHHHHHh--CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 333777776777654 334444332 357999999875 33344444443333 23 2565553321 367778999
Q ss_pred Hcccceehh----hHHHH-HHHHcCCCEEEEEcCChHHHHHHH
Q 016179 319 ASRVALCTS----GTVAV-ELQLARLPCVVAYRAHFLTEWFIR 356 (394)
Q Consensus 319 ~ADl~I~~S----Gt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~ 356 (394)
.+|+++..- |-.|+ =+..+|+|+++ .+-+++...+..
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l-~r~n~fwqdl~e 267 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCLLIQLGKPVVL-SRDNPFWQDLTE 267 (322)
T ss_pred hCCEEEEeechhhHHhHHHHHHHCCCcEEE-ecCCchHHHHHh
Confidence 999999855 44444 68999999886 566665555544
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.74 Score=48.86 Aligned_cols=108 Identities=14% Similarity=0.128 Sum_probs=75.1
Q ss_pred CCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh--hC--CCeEEEEEeCCCcC------hHHHHHHHhhc--CCCCEE
Q 016179 236 VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD--SF--PELITVIHVAPNRH------VENYITGLIQK--WPVPSI 303 (394)
Q Consensus 236 l~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~--~~--~~~~~vi~~g~~~~------~~~~l~~~~~~--~~~~v~ 303 (394)
++++.+++.+. +|-++-|+. ..+++.+.++.+ .. .++|||+.+-+.+. +.+.+.+..++ .+.++.
T Consensus 385 ~dpd~~~ig~v--~Rl~~yKr~-dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFA--RRFATYKRA-DLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEE--EcchhhhhH-HHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence 45667777776 788888873 457777777753 21 35898888765443 44445444444 344677
Q ss_pred EecCCCcchHHHHHHHccccee---h----hhHHHHHHHHcCCCEEEEEc
Q 016179 304 LVPGGSSNLKYDAFSASRVALC---T----SGTVAVELQLARLPCVVAYR 346 (394)
Q Consensus 304 ~~~g~~~~~~~~~~~~ADl~I~---~----SGt~tlEa~a~G~P~Iv~y~ 346 (394)
++.+|...-...++++||+.+. + |||+.+=++..|.+.+-+..
T Consensus 462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~D 511 (601)
T TIGR02094 462 FLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILD 511 (601)
T ss_pred EEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeeccc
Confidence 8878743335678999999998 2 59999999999999887655
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.36 Score=49.15 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=58.8
Q ss_pred HHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh-----hHHHHHH
Q 016179 260 IFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVEL 334 (394)
Q Consensus 260 ~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa 334 (394)
..+++++.+.+..|+++|=+ ++..+ ....+.++ .++ .++.+++++...++.+++..||+.+..| |-+..||
T Consensus 292 ~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA 367 (438)
T TIGR02919 292 DQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRA 367 (438)
T ss_pred HHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHH
Confidence 35567778877889999887 44332 23445554 444 3788888874348999999999999988 3344599
Q ss_pred HHcCCCEEEEEcC
Q 016179 335 QLARLPCVVAYRA 347 (394)
Q Consensus 335 ~a~G~P~Iv~y~~ 347 (394)
...|+|++- |..
T Consensus 368 ~~~G~pI~a-fd~ 379 (438)
T TIGR02919 368 FEYNLLILG-FEE 379 (438)
T ss_pred HHcCCcEEE-Eec
Confidence 999999774 543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=92.64 E-value=4.9 Score=35.93 Aligned_cols=154 Identities=14% Similarity=0.171 Sum_probs=80.4
Q ss_pred ceEEEEeCC-----chH-HHHHHHHHHHHHhcCCCCeEEEEecChh----hHhccCccc-cccCcceeccHHHhhhhHHH
Q 016179 32 LRVFIVAGE-----VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSM----MSEQGMKSL-FPMEDIAVMGIWELLPHIYK 100 (394)
Q Consensus 32 ~kIlI~aG~-----~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~----m~~~g~~~~-~~~~~l~~~G~~~~l~~~~~ 100 (394)
+||.|++-- -|| ..++-.|+..|.+++.+ +++.+..... -+-.|++.. .+ .+-.|- +..+..
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~-v~Vyc~~~~~~~~~~~y~gv~l~~i~---~~~~g~---~~si~y 74 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGID-VTVYCRSDYYPYKEFEYNGVRLVYIP---APKNGS---AESIIY 74 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCce-EEEEEccCCCCCCCcccCCeEEEEeC---CCCCCc---hHHHHH
Confidence 467665432 356 55578899888876664 7776654211 122333321 11 112232 222333
Q ss_pred HHHHHHHHHHHHHhc--CCCEEEEeCCC--CchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHH-------
Q 016179 101 FRVRLKETIEAALLF--RPHAVVTVDSK--GFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLK------- 169 (394)
Q Consensus 101 ~~~~~~~~~~~i~~~--~PD~Vi~~~~~--~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~------- 169 (394)
.+..+..+.+.++.. +.|+++..++. .|-+.+.+.+++. |.|+++.- .--.|.-..|...++
T Consensus 75 d~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~------g~~v~vN~-DGlEWkR~KW~~~~k~~lk~~E 147 (185)
T PF09314_consen 75 DFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK------GGKVVVNM-DGLEWKRAKWGRPAKKYLKFSE 147 (185)
T ss_pred HHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc------CCcEEECC-CcchhhhhhcCHHHHHHHHHHH
Confidence 344455555555543 67888877752 3455566555544 56865432 222243111101122
Q ss_pred HH-HHhhhheeecCcccHHHHH-hcC-CCeEEE
Q 016179 170 NL-AAFVDHILCILPNEEAICR-LNG-LAATFV 199 (394)
Q Consensus 170 ~l-~~~~d~v~~~~p~~~~~~~-~~g-~~~~~v 199 (394)
++ .+++|.+++-++.-+++++ +++ .+++++
T Consensus 148 ~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~I 180 (185)
T PF09314_consen 148 KLAVKYADRLIADSKGIQDYIKERYGRKKSTFI 180 (185)
T ss_pred HHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEe
Confidence 23 6889999999988888775 455 444443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.91 Score=47.33 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhhhCCCeEEEEEeCCCc-ChHHHHHHHhhcC--C-----------------------------CCEEEe
Q 016179 258 LPIFAKTVELLKDSFPELITVIHVAPNR-HVENYITGLIQKW--P-----------------------------VPSILV 305 (394)
Q Consensus 258 l~~ll~a~~~l~~~~~~~~~vi~~g~~~-~~~~~l~~~~~~~--~-----------------------------~~v~~~ 305 (394)
+..+++++..+.+++|++++.+-+-++. +..+.+++.+.+. . ..+.+.
T Consensus 335 ~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~ 414 (519)
T TIGR03713 335 LQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFT 414 (519)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEE
Confidence 5567778888877889999886554432 2223333222211 0 134433
Q ss_pred cCCCcc--hHHHHHHHcccceehh---hHHHH-HHHHcCCCEE
Q 016179 306 PGGSSN--LKYDAFSASRVALCTS---GTVAV-ELQLARLPCV 342 (394)
Q Consensus 306 ~g~~~~--~~~~~~~~ADl~I~~S---Gt~tl-Ea~a~G~P~I 342 (394)
++ .+ ++.+.+..+.++|..| |-.|+ ||.+.|+|+|
T Consensus 415 -gy-~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI 455 (519)
T TIGR03713 415 -TL-TNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI 455 (519)
T ss_pred -ec-CCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee
Confidence 54 34 8999999999999999 44354 9999999998
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=91.03 E-value=1.6 Score=42.64 Aligned_cols=110 Identities=8% Similarity=0.016 Sum_probs=67.4
Q ss_pred CcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh-CCCeEEEEEeCCC---cChHHHHHHHhhc-CCC-CEEEecCCC-cch
Q 016179 240 ATVISLLPGSRLQEVARMLPIFAKTVELLKDS-FPELITVIHVAPN---RHVENYITGLIQK-WPV-PSILVPGGS-SNL 312 (394)
Q Consensus 240 ~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~-~~~~~~vi~~g~~---~~~~~~l~~~~~~-~~~-~v~~~~g~~-~~~ 312 (394)
+.+|++ |..|..-|+++. +++.|++. ..+.+++++-+-. .++.+.+.+...+ .+. ++.++..+- .+|
T Consensus 185 ~ltILv--GNSgd~sNnHie----aL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~e 258 (360)
T PF07429_consen 185 KLTILV--GNSGDPSNNHIE----ALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDE 258 (360)
T ss_pred ceEEEE--cCCCCCCccHHH----HHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHH
Confidence 334444 777776777764 33444432 2469999998753 3344444443333 232 455543221 467
Q ss_pred HHHHHHHcccceehh----hHHHH-HHHHcCCCEEEEEcCChHHHHHHH
Q 016179 313 KYDAFSASRVALCTS----GTVAV-ELQLARLPCVVAYRAHFLTEWFIR 356 (394)
Q Consensus 313 ~~~~~~~ADl~I~~S----Gt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~ 356 (394)
--++++.||+++.-. |-.|+ =++.+|+|+++ .+-+++...+..
T Consensus 259 Yl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L-~~~np~~~~l~~ 306 (360)
T PF07429_consen 259 YLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFL-SRDNPFWQDLKE 306 (360)
T ss_pred HHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEE-ecCChHHHHHHh
Confidence 778999999999976 54554 68999999886 666666555543
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.70 E-value=4.1 Score=40.84 Aligned_cols=161 Identities=14% Similarity=0.086 Sum_probs=90.6
Q ss_pred hhhheeecCcccHHHHH-hcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC
Q 016179 174 FVDHILCILPNEEAICR-LNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS 249 (394)
Q Consensus 174 ~~d~v~~~~p~~~~~~~-~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS 249 (394)
.-|.+.+..|+....+. ..|+. +..+|.|--|.+..-.. ...........+.++.++++|+..|-=
T Consensus 148 ~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~----------~~~~~~~~~~~~~~~~~k~vIlyaPTf 217 (388)
T COG1887 148 HWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAG----------KTEDILLIQLALPLPQDKKVILYAPTF 217 (388)
T ss_pred eeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhcc----------chhhhHHHhhhcCCcccCceEEecCCc
Confidence 45666677777666543 33443 67899998886542100 011122234567788889999999877
Q ss_pred cHHH-----HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccce
Q 016179 250 RLQE-----VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVAL 324 (394)
Q Consensus 250 rg~e-----i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I 324 (394)
|+.+ ....++.-.+.+.+... ..+..+++--++-. .+...... .....+..+.. ..++.++|..+|++|
T Consensus 218 r~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~ii~k~Hp~i--s~~~~~~~-~~~~~~~~vs~--~~di~dll~~sDiLI 291 (388)
T COG1887 218 RDNDVLIGTQFFNLDIDIEKLKEKLG-ENEYVIIVKPHPLI--SDKIDKRY-ALDDFVLDVSD--NADINDLLLVSDILI 291 (388)
T ss_pred cCCccccchhhhhhhhhHHHHHHhhc-cCCeEEEEecChhh--hhhhhhhh-hccceeEeccc--chhHHHHHhhhCEEE
Confidence 7754 11112222222222221 13566665555421 11111100 11111333333 358999999999999
Q ss_pred ehhhHHHHHHHHcCCCEEEEEcCChHH
Q 016179 325 CTSGTVAVELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 325 ~~SGt~tlEa~a~G~P~Iv~y~~~~~~ 351 (394)
|-=-++-.|.+.+.+|+++ |..+.-.
T Consensus 292 TDySSv~fdf~~l~KPiif-y~~D~~~ 317 (388)
T COG1887 292 TDYSSVIFDFMLLDKPIIF-YTYDLEQ 317 (388)
T ss_pred eechHHHHHHHHhcCcEEE-EecChHH
Confidence 9887777799999999886 5444333
|
|
| >PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
Probab=90.45 E-value=2.8 Score=33.56 Aligned_cols=85 Identities=22% Similarity=0.278 Sum_probs=45.6
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCe-EE-EEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPV-SF-SGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETI 109 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~-~~-~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~ 109 (394)
||||++++|+-.|-.|-+| ++ .+. + ++ +..|+..+...+-. .+ +.. .-...+.
T Consensus 1 MkVLviGsGgREHAia~~l----~~-s~~-v~~v~~aPGN~G~~~~~~~--~~---~~~--------------~d~~~l~ 55 (100)
T PF02844_consen 1 MKVLVIGSGGREHAIAWKL----SQ-SPS-VEEVYVAPGNPGTAELGKN--VP---IDI--------------TDPEELA 55 (100)
T ss_dssp EEEEEEESSHHHHHHHHHH----TT-CTT-EEEEEEEE--TTGGGTSEE--E----S-T--------------T-HHHHH
T ss_pred CEEEEECCCHHHHHHHHHH----hc-CCC-CCEEEEeCCCHHHHhhcee--cC---CCC--------------CCHHHHH
Confidence 7999999997778665555 33 233 4 33 45554444332211 11 100 1123356
Q ss_pred HHHHhcCCCEEEEeCCCCch--HHHHHHHHHhccccCCCCCe
Q 016179 110 EAALLFRPHAVVTVDSKGFS--FRLLKQLRARYSHERLNGPA 149 (394)
Q Consensus 110 ~~i~~~~PD~Vi~~~~~~f~--~~la~~l~~~~~~~~~~ip~ 149 (394)
++.+++++|+||. | |.-| ..++-.+++. ++|+
T Consensus 56 ~~a~~~~idlvvv-G-PE~pL~~Gl~D~l~~~------gi~v 89 (100)
T PF02844_consen 56 DFAKENKIDLVVV-G-PEAPLVAGLADALRAA------GIPV 89 (100)
T ss_dssp HHHHHTTESEEEE-S-SHHHHHTTHHHHHHHT------T-CE
T ss_pred HHHHHcCCCEEEE-C-ChHHHHHHHHHHHHHC------CCcE
Confidence 7778899999885 4 3233 3456566654 7895
|
3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.82 Score=46.88 Aligned_cols=59 Identities=20% Similarity=0.334 Sum_probs=36.8
Q ss_pred HHHHhhcCCC--C-EEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCCh
Q 016179 291 ITGLIQKWPV--P-SILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHF 349 (394)
Q Consensus 291 l~~~~~~~~~--~-v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~ 349 (394)
+.++.+++++ + +.++.-..+.+.+.+++.+..+...+ |-+++|||+||+|+|.+..+++
T Consensus 334 l~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP 400 (495)
T KOG0853|consen 334 LLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGP 400 (495)
T ss_pred HHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCc
Confidence 3344555543 2 33333221334566666666666655 7888999999999998776654
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=88.95 E-value=6.1 Score=40.67 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=58.6
Q ss_pred HHHhhcCCCCCCcEEEEECCCcHHHH-HhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecC
Q 016179 229 DFKNKYSVPSGATVISLLPGSRLQEV-ARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPG 307 (394)
Q Consensus 229 ~~r~~lgl~~~~~~IlllgGSrg~ei-~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g 307 (394)
+..+.+.-+.++.+|++-=||..... .+....+.++++ +.|. +|+|...+.. ...+ . .++.+..-
T Consensus 265 ~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~----~~~~-~~iW~~~~~~--~~~l----~---~n~~~~~W 330 (500)
T PF00201_consen 265 ELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFE----NLPQ-RFIWKYEGEP--PENL----P---KNVLIVKW 330 (500)
T ss_dssp HHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHH----CSTT-EEEEEETCSH--GCHH----H---TTEEEESS
T ss_pred ccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHh----hCCC-cccccccccc--cccc----c---ceEEEecc
Confidence 34444433236688999878865321 222233444433 3355 8999887521 1222 1 24555432
Q ss_pred CCcchHHHHHH--HcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 308 GSSNLKYDAFS--ASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 308 ~~~~~~~~~~~--~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.++ .++++ ..+++||=.|..++ |++.+|+|||.+ +.-.--..-+++++
T Consensus 331 --~PQ-~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~-P~~~DQ~~na~~~~ 381 (500)
T PF00201_consen 331 --LPQ-NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGI-PLFGDQPRNAARVE 381 (500)
T ss_dssp ----H-HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE--GCSTTHHHHHHHHH
T ss_pred --ccc-hhhhhcccceeeeeccccchhhhhhhccCCccCC-CCcccCCccceEEE
Confidence 122 46775 45789999998776 999999999974 44433333455554
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >KOG3339 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.55 E-value=3 Score=37.04 Aligned_cols=160 Identities=21% Similarity=0.241 Sum_probs=75.5
Q ss_pred ccCCCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccc-cccCcce-----eccHHH----hh
Q 016179 27 IKDGELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSL-FPMEDIA-----VMGIWE----LL 95 (394)
Q Consensus 27 ~~~~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~-~~~~~l~-----~~G~~~----~l 95 (394)
|++.+.++++..|++ ||.- -.++.+.|.++... -..+.-..+.|.++-+..+ .+..+.. +..-.| .+
T Consensus 34 Pk~~s~~~lVvlGSG-GHT~EMlrLl~~l~~~y~~-r~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~l 111 (211)
T KOG3339|consen 34 PKDKSLSTLVVLGSG-GHTGEMLRLLEALQDLYSP-RSYIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWL 111 (211)
T ss_pred CcCCcceEEEEEcCC-CcHHHHHHHHHHHHhhcCc-eEEEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhh
Confidence 343445676666543 5655 56788888776542 3333222356644433221 0111111 111111 22
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeCCCC--chHHHHHHHHHhccccCCCCCeEEEeecCccccc---cCcchHHHH
Q 016179 96 PHIYKFRVRLKETIEAALLFRPHAVVTVDSKG--FSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAW---KGGEARLKN 170 (394)
Q Consensus 96 ~~~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~--f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~---~~g~~r~~~ 170 (394)
...+..+..+.++.-++-+-+||++++-| |+ .+..+++.+-+.-. .....+.|+.---... -.| +-
T Consensus 112 tSv~Tti~all~s~~lv~RirPdlil~NG-PGTCv~i~~~a~l~~iL~----~~~~~IvyvES~cRV~tlSlsG----ki 182 (211)
T KOG3339|consen 112 TSVFTTIWALLQSFVLVWRIRPDLILCNG-PGTCVPICLSAYLMEILG----LKSSHIVYVESICRVKTLSLSG----KI 182 (211)
T ss_pred hhHHHHHHHHHHHheEEEecCCCEEEECC-CCcEeHHHHHHHHHHHhC----cCceEEEEEeeeeEeeccccCc----ee
Confidence 22333333444444555566899999876 44 35666665543211 1122334432110000 011 11
Q ss_pred HHHhhhheeecCcccHHHHHhcCCCeEEEcC
Q 016179 171 LAAFVDHILCILPNEEAICRLNGLAATFVGH 201 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~ 201 (394)
+...+|.+++-.|.-++.|. ++.+.|.
T Consensus 183 L~~~~d~Fivqw~~L~~ky~----~~~~~g~ 209 (211)
T KOG3339|consen 183 LYPVVDLFIVQWPALATKYL----RVKYFGI 209 (211)
T ss_pred ehhHHHHHHHhhHHHHHhcc----cceeeee
Confidence 46678888888887776554 3555553
|
|
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.88 E-value=2.3 Score=35.96 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=68.5
Q ss_pred EEEECCCcHHHHHhhHHH--HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHc
Q 016179 243 ISLLPGSRLQEVARMLPI--FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSAS 320 (394)
Q Consensus 243 IlllgGSrg~ei~~~l~~--ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~A 320 (394)
|+++-||--...++++-. +.+..+.+ .-++++..|.. +... + .+ .+++.+-..+.+..+.+.|
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i-----~e~lIvQyGn~-d~kp-v------ag--l~v~~F~~~~kiQsli~da 66 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELI-----QEELIVQYGNG-DIKP-V------AG--LRVYGFDKEEKIQSLIHDA 66 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHh-----hhheeeeecCC-Cccc-c------cc--cEEEeechHHHHHHHhhcc
Confidence 566677774445554222 22222222 34677777753 2221 1 12 2333111146799999999
Q ss_pred ccceehhhHHHH-HHHHcCCCEEEEEcCChHHH-------HHHHhhccCCccchhh
Q 016179 321 RVALCTSGTVAV-ELQLARLPCVVAYRAHFLTE-------WFIRYKAKIPYISLPN 368 (394)
Q Consensus 321 Dl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~-------~~a~~~vk~~~~~l~N 368 (394)
.++|+-+|+.++ -+.-.++|.|++.+.+.... .+|+.++..+|+...|
T Consensus 67 rIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~s 122 (161)
T COG5017 67 RIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACS 122 (161)
T ss_pred eEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEc
Confidence 999999999886 99999999999877664322 3477777777765544
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.34 E-value=2.4 Score=43.76 Aligned_cols=119 Identities=12% Similarity=0.016 Sum_probs=62.7
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC----hHH---HHHHHhhcCCCCE
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH----VEN---YITGLIQKWPVPS 302 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~----~~~---~l~~~~~~~~~~v 302 (394)
..+-+.-.+++++|.+.-||....-.+.+..+ +..|.. .+..|+++..+... ... -+++... +..+
T Consensus 273 ~~~WLd~~~~~svVyvsfGS~~~~~~~~~~el---a~gL~~--~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~ 345 (477)
T PLN02863 273 VMTWLDTCEDHKVVYVCFGSQVVLTKEQMEAL---ASGLEK--SGVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGL 345 (477)
T ss_pred HHHHHhcCCCCceEEEEeeceecCCHHHHHHH---HHHHHh--CCCcEEEEECCCcccccchhhCCHHHHHHhc--cCCE
Confidence 33334444556889998888753111222333 333433 25678888863211 000 0111111 1123
Q ss_pred EEecCCCcchHHHHHHH--cccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 303 ILVPGGSSNLKYDAFSA--SRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 303 ~~~~g~~~~~~~~~~~~--ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.+. +. .+ -.++++. .+++|+=.|-.+. |++++|+|+|+ .+.-.--+..+++++
T Consensus 346 ~v~-~w-~P-Q~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~-~P~~~DQ~~na~~v~ 401 (477)
T PLN02863 346 VIR-GW-AP-QVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLA-WPMAADQFVNASLLV 401 (477)
T ss_pred Eec-CC-CC-HHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEe-CCccccchhhHHHHH
Confidence 332 22 12 3467775 6799999997665 99999999986 454433333355443
|
|
| >TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 | Back alignment and domain information |
|---|
Probab=87.30 E-value=7.1 Score=34.69 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=23.6
Q ss_pred hHHHHHHHcccceehhhH-HHH-HH---HH------cCCCEEEEE
Q 016179 312 LKYDAFSASRVALCTSGT-VAV-EL---QL------ARLPCVVAY 345 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~SGt-~tl-Ea---~a------~G~P~Iv~y 345 (394)
....++..||.+|+-+|+ .|+ |+ .. ..+|++++.
T Consensus 89 Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 89 RKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 344577889999999964 555 54 32 399988743
|
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=86.49 E-value=4.9 Score=43.90 Aligned_cols=109 Identities=15% Similarity=0.100 Sum_probs=69.7
Q ss_pred CCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh--C--CCeEEEEEeCCCcChH------HHHHHHhh--cCCCCEE
Q 016179 236 VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS--F--PELITVIHVAPNRHVE------NYITGLIQ--KWPVPSI 303 (394)
Q Consensus 236 l~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~--~--~~~~~vi~~g~~~~~~------~~l~~~~~--~~~~~v~ 303 (394)
++++.++|.+. +|-++.|+. .++++.++++.+. . .++|||+.+-..+..+ +.+.+..+ ....++.
T Consensus 474 ldpd~ltigfa--rRfa~YKR~-~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFA--RRFATYKRA-TLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeee--ecchhhhhH-HHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEE
Confidence 45566666664 677888873 4567776666431 1 3589888875443221 12333333 2333677
Q ss_pred EecCCCcchHHHHHHHcccceeh-------hhHHHHHHHHcCCCEEEEEcC
Q 016179 304 LVPGGSSNLKYDAFSASRVALCT-------SGTVAVELQLARLPCVVAYRA 347 (394)
Q Consensus 304 ~~~g~~~~~~~~~~~~ADl~I~~-------SGt~tlEa~a~G~P~Iv~y~~ 347 (394)
++.+|...-...+++.||+.+.. |||+-+=++.-|.+.+-+..+
T Consensus 551 fle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDG 601 (778)
T cd04299 551 FLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDG 601 (778)
T ss_pred EEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccC
Confidence 88887323345679999988874 599999999999998877654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA | Back alignment and domain information |
|---|
Probab=86.05 E-value=7.4 Score=36.88 Aligned_cols=113 Identities=6% Similarity=-0.087 Sum_probs=63.1
Q ss_pred EEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEec--ChhhHhccCccccccCcceeccHHHhhhhHHHHHH---------
Q 016179 35 FIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVG--GSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRV--------- 103 (394)
Q Consensus 35 lI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~g--g~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~--------- 103 (394)
..+-|-..|---+..|++++++++ +-++-.| +..+.++|+...+++.-+++..............|
T Consensus 131 a~ivG~a~~~e~~~~I~~e~q~r~---~lv~l~G~i~~q~~E~G~~lg~~~~lvp~G~~ts~~H~~g~AiRaAliFggv~ 207 (287)
T cd01917 131 AVILGRAKDSKALKKIVDDLMGRG---FMLFLCDEIVEQLLEENVKLGLDYIAYPLGNFTQAIHAANYALRAGLMFGGIE 207 (287)
T ss_pred EEEEecCCChHHHHHHHHHHHHCC---cEEEEecHHHHHHHHcCCeeccceeEeecCchhhHHHHHHHHHHHHHHhCCCC
Confidence 333343334445889999999874 3333333 24567888887666555555544332222221122
Q ss_pred --HHHHHHHHHHhcCCCEEEEeCC-CCchHHHHHHHHHhccccCCCCCeEEEeecC
Q 016179 104 --RLKETIEAALLFRPHAVVTVDS-KGFSFRLLKQLRARYSHERLNGPAHFHYVAP 156 (394)
Q Consensus 104 --~~~~~~~~i~~~~PD~Vi~~~~-~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~ 156 (394)
-+.++.++.++.=|-+|+.+|- ..-....+.-+-+ .|+|++++...|
T Consensus 208 pGn~~ei~dY~~nRV~Afv~A~G~~s~~~~A~aaGai~------~GfPVI~d~~~p 257 (287)
T cd01917 208 PGKREEIRDYQRRRVRAFVLYLGELDMVKTAAAAGAIF------TGFPVITDQELP 257 (287)
T ss_pred CcCHHHHHHHHHhhcCEEEEeccccCHHHHHHHhhHHH------cCCCEEeCCCCc
Confidence 2677888888888888888862 1112222222222 289987774334
|
ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA. |
| >TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1 | Back alignment and domain information |
|---|
Probab=86.02 E-value=18 Score=31.36 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=43.8
Q ss_pred HHHHHHHcccceehhh---HHH-H-HHHHcCCCEEEEEcCChHHHHHHHhhccCCccchhhhhcCCCCcccccCCCCCHH
Q 016179 313 KYDAFSASRVALCTSG---TVA-V-ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387 (394)
Q Consensus 313 ~~~~~~~ADl~I~~SG---t~t-l-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk~~~~~l~Nil~~~~i~pEliq~~~~~~ 387 (394)
..-....||.+|+.+| |.. + |+...++|+++++-.+..+.++... +.+....++++.-.-+++
T Consensus 85 k~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~~~l~~~------------~~~~~~~~~~~~~~~~~~ 152 (159)
T TIGR00725 85 NFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTGGWTDRLSQV------------LIEGVYLDERVIVEITPA 152 (159)
T ss_pred HHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCCcchHHHHHH------------HhccccccceeEecCCHH
Confidence 3446678999999774 433 3 8889999988766555555544431 222333444566667788
Q ss_pred HHHHHh
Q 016179 388 TLTHLL 393 (394)
Q Consensus 388 ~i~~~~ 393 (394)
.+.+.+
T Consensus 153 e~~~~~ 158 (159)
T TIGR00725 153 EAVKLA 158 (159)
T ss_pred HHHHhh
Confidence 777654
|
This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.99 E-value=3 Score=43.76 Aligned_cols=134 Identities=14% Similarity=0.186 Sum_probs=79.4
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC---CEEEec
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV---PSILVP 306 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~---~v~~~~ 306 (394)
.|..++|++|..+..-+ .+ .-++-|..++....+.+..|+-.+++.+-+... ++.++....+.|+ ++.+.+
T Consensus 749 ~r~~y~Lp~d~vvf~~F--Nq---LyKidP~~l~~W~~ILk~VPnS~LwllrfPa~g-e~rf~ty~~~~Gl~p~riifs~ 822 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVFCNF--NQ---LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG-EQRFRTYAEQLGLEPDRIIFSP 822 (966)
T ss_pred CCCCCCCCCCeEEEeec--hh---hhcCCHHHHHHHHHHHHhCCcceeEEEeccccc-hHHHHHHHHHhCCCccceeecc
Confidence 46678999887444433 22 334567888888888888888666655433211 2334444444444 233222
Q ss_pred CCCcchHHHHHHHcccceehh---hHHHH-HHHHcCCCEEEEEcCChHHHHHH-HhhccCCccchhhhhcCC
Q 016179 307 GGSSNLKYDAFSASRVALCTS---GTVAV-ELQLARLPCVVAYRAHFLTEWFI-RYKAKIPYISLPNILLDS 373 (394)
Q Consensus 307 g~~~~~~~~~~~~ADl~I~~S---Gt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a-~~~vk~~~~~l~Nil~~~ 373 (394)
--..+|--...+-||+.+-.+ |++|- |.+-.|+|||. -++..+...+| ..+. ..|++.++++.
T Consensus 823 va~k~eHvrr~~LaDv~LDTplcnGhTTg~dvLw~GvPmVT-mpge~lAsrVa~Sll~---~~Gl~hliak~ 890 (966)
T KOG4626|consen 823 VAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGVPMVT-MPGETLASRVAASLLT---ALGLGHLIAKN 890 (966)
T ss_pred ccchHHHHHhhhhhhhcccCcCcCCcccchhhhccCCceee-cccHHHHHHHHHHHHH---HcccHHHHhhh
Confidence 100123334456678877655 87775 99999999985 67666665554 3344 45667766653
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=85.90 E-value=2 Score=44.06 Aligned_cols=113 Identities=14% Similarity=0.151 Sum_probs=62.5
Q ss_pred CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC--hHHHHHHHhhcCCCCEEEecCCCcchHH
Q 016179 237 PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH--VENYITGLIQKWPVPSILVPGGSSNLKY 314 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~--~~~~l~~~~~~~~~~v~~~~g~~~~~~~ 314 (394)
.+++++|.+.-||....-.+ .+.+.+..|.. .+.+|+++..+... ..+.+++.... .+..+. +. . .-.
T Consensus 266 ~~~~svvyvsfGS~~~~~~~---~~~e~a~~l~~--~~~~flw~~~~~~~~~~~~~~~~~~~~--~~g~v~-~w-~-PQ~ 335 (456)
T PLN02210 266 QARSSVVYISFGSMLESLEN---QVETIAKALKN--RGVPFLWVIRPKEKAQNVQVLQEMVKE--GQGVVL-EW-S-PQE 335 (456)
T ss_pred CCCCceEEEEecccccCCHH---HHHHHHHHHHh--CCCCEEEEEeCCccccchhhHHhhccC--CCeEEE-ec-C-CHH
Confidence 34567899988887531111 22233333432 24678887754211 11112222211 123233 22 1 234
Q ss_pred HHHHHcc--cceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 315 DAFSASR--VALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 315 ~~~~~AD--l~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
++++.++ ++||=.|-.+. |++..|+|+|. .+...--+..++++++
T Consensus 336 ~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~-~P~~~DQ~~na~~~~~ 383 (456)
T PLN02210 336 KILSHMAISCFVTHCGWNSTIETVVAGVPVVA-YPSWTDQPIDARLLVD 383 (456)
T ss_pred HHhcCcCcCeEEeeCCcccHHHHHHcCCCEEe-cccccccHHHHHHHHH
Confidence 6888887 99999997665 99999999986 5654444444666653
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.47 E-value=2.4 Score=43.73 Aligned_cols=108 Identities=11% Similarity=0.029 Sum_probs=56.1
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC--------hHHHHHHHhhcCCCC
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH--------VENYITGLIQKWPVP 301 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~--------~~~~l~~~~~~~~~~ 301 (394)
..+-+.-.+.+.+|.+.-||...--. +.+.+.+..|.. .+..|+|+...... +-+-+.+...+ +
T Consensus 270 ~~~wld~~~~~svvyvsfGS~~~~~~---~~~~ela~~l~~--~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~---r 341 (475)
T PLN02167 270 IMRWLDDQPESSVVFLCFGSLGSLPA---PQIKEIAQALEL--VGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMG---R 341 (475)
T ss_pred HHHHHhcCCCCceEEEeecccccCCH---HHHHHHHHHHHh--CCCcEEEEEecCcccccchhhhCChHHHHHhcc---C
Confidence 43333334456689888888753111 122233333332 24578887653211 00001111111 2
Q ss_pred EEEecCCCcchHHHHHHH--cccceehhhHHH-HHHHHcCCCEEEEEcCCh
Q 016179 302 SILVPGGSSNLKYDAFSA--SRVALCTSGTVA-VELQLARLPCVVAYRAHF 349 (394)
Q Consensus 302 v~~~~g~~~~~~~~~~~~--ADl~I~~SGt~t-lEa~a~G~P~Iv~y~~~~ 349 (394)
..+. +. -.-.++++. .+.+|+=.|-.| +|++.+|+|+|+ .+...
T Consensus 342 g~v~-~w--~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~-~P~~~ 388 (475)
T PLN02167 342 GLVC-GW--APQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIAT-WPMYA 388 (475)
T ss_pred eeee-cc--CCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEe-ccccc
Confidence 3333 22 123467765 567999999755 599999999986 45443
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=84.31 E-value=5 Score=44.69 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=59.1
Q ss_pred HHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeE----EEEEeCCC----cChHH---HHHHHhh-
Q 016179 229 DFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELI----TVIHVAPN----RHVEN---YITGLIQ- 296 (394)
Q Consensus 229 ~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~----~vi~~g~~----~~~~~---~l~~~~~- 296 (394)
+++++++ ++++|+ +=.|....|. ++.-++|++.+.+++|+.+ ++.++.+. +++.+ .+.+.+.
T Consensus 355 ~lr~~~~---g~kiIl--gVDRLD~~KG-I~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~r 428 (934)
T PLN03064 355 ELKERFA---GRKVML--GVDRLDMIKG-IPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGR 428 (934)
T ss_pred HHHHHhC---CceEEE--EeeccccccC-HHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 4555654 344343 3355554444 6777889999887778743 33233222 12222 1222111
Q ss_pred ---cCC----CCEEEecC-CCcchHHHHHHHcccceehh-----hHHHHHHHHcCC
Q 016179 297 ---KWP----VPSILVPG-GSSNLKYDAFSASRVALCTS-----GTVAVELQLARL 339 (394)
Q Consensus 297 ---~~~----~~v~~~~g-~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~ 339 (394)
.++ .+++++.- ...++..++|+.||+++..| +.+..|+++|+.
T Consensus 429 IN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~ 484 (934)
T PLN03064 429 INGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (934)
T ss_pred HhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhc
Confidence 111 12444321 11467889999999999999 456679999954
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=81.41 E-value=6 Score=40.90 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=28.0
Q ss_pred HHHHH--HHcccceehhhHHHH-HHHHcCCCEEEEEcCCh
Q 016179 313 KYDAF--SASRVALCTSGTVAV-ELQLARLPCVVAYRAHF 349 (394)
Q Consensus 313 ~~~~~--~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~ 349 (394)
-.+++ .+.+++|+=.|-.+. |++.+|+|||+ .+...
T Consensus 352 Q~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~-~P~~~ 390 (481)
T PLN02554 352 QVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAA-WPLYA 390 (481)
T ss_pred HHHHhCCcccCcccccCccchHHHHHHcCCCEEe-cCccc
Confidence 35678 677789999997665 99999999996 55543
|
|
| >TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family | Back alignment and domain information |
|---|
Probab=80.47 E-value=28 Score=33.59 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=54.5
Q ss_pred cEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChH-HHHHHHhhcCCCCEEEecCCCcchHHHHHHH
Q 016179 241 TVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVE-NYITGLIQKWPVPSILVPGGSSNLKYDAFSA 319 (394)
Q Consensus 241 ~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~-~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 319 (394)
-+||..+-|+- +.+ .+.++. ++..++++++.-+. +..+ ..+...+.+.+.++.++.. ..+..+|..
T Consensus 117 ~~ILT~~~S~t--v~~---~l~~a~----~~~~~f~V~v~Esr-P~~~G~~~a~~L~~~gI~vtlI~D---sa~~~~m~~ 183 (301)
T TIGR00511 117 DVVMTHCNSEA--ALS---VIKTAF----EQGKDIEVIATETR-PRKQGHITAKELRDYGIPVTLIVD---SAVRYFMKE 183 (301)
T ss_pred CEEEEECCcHH--HHH---HHHHHH----HcCCcEEEEEecCC-CcchHHHHHHHHHHCCCCEEEEeh---hHHHHHHHh
Confidence 47888876643 222 233332 22345776654443 3222 1122334556778887763 467788999
Q ss_pred ccccee-------------hhhHHHH--HHHHcCCCEEEEEc
Q 016179 320 SRVALC-------------TSGTVAV--ELQLARLPCVVAYR 346 (394)
Q Consensus 320 ADl~I~-------------~SGt~tl--Ea~a~G~P~Iv~y~ 346 (394)
.|.++. +.||..+ =|-..++|++++-+
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~ 225 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAE 225 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEcc
Confidence 998876 4477665 45667999998633
|
The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 394 | |||
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 100.0 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.96 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.9 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.89 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.88 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.87 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.85 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.84 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.84 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.84 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.77 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.76 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.73 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.71 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.71 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.66 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.66 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.63 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.63 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.63 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.62 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.62 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.62 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.61 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.6 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.6 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.6 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.6 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.59 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 99.56 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.56 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.56 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.51 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.46 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.44 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.42 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.37 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 99.25 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.24 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 99.23 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 99.21 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 99.17 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.03 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.01 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.93 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 98.83 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 98.7 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 98.53 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.53 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.53 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.47 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.38 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 98.32 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 98.27 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 97.8 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.79 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 97.7 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.69 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 96.91 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 96.25 | |
| 3sbx_A | 189 | Putative uncharacterized protein; structural genom | 90.48 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 85.78 | |
| 3qua_A | 199 | Putative uncharacterized protein; structural genom | 85.68 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 80.64 |
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=292.08 Aligned_cols=282 Identities=16% Similarity=0.171 Sum_probs=195.9
Q ss_pred CceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCcc-ccccCcceecc-----HHHhhhhHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKS-LFPMEDIAVMG-----IWELLPHIYKFRV 103 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~-~~~~~~l~~~G-----~~~~l~~~~~~~~ 103 (394)
++||+|++||||||++ |.+|+++|++++++ +.|+|.. +.+|...++. .+++..+++.| +.+.++.+.++++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~-V~~vg~~-~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 79 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYA-VHWLGTP-RGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLK 79 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCE-EEEEECS-SSTHHHHTGGGTCCEEECC--------------CHHHHHH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCE-EEEEECC-chHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHH
Confidence 4689999999999999 99999999998764 6665532 2344333322 23333444443 3456667778888
Q ss_pred HHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHH-HHhhhheeec
Q 016179 104 RLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNL-AAFVDHILCI 181 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l-~~~~d~v~~~ 181 (394)
.+.++.+++++++||+||+++ |++++..+|+++. ++|+++|+ ++. .+| +++++ ++++|++++.
T Consensus 80 ~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~--------~iP~vihe-~n~----~~G--~~nr~l~~~a~~v~~~ 144 (365)
T 3s2u_A 80 SLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLN--------GVPLVIHE-QNA----VAG--TANRSLAPIARRVCEA 144 (365)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHT--------TCCEEEEE-CSS----SCC--HHHHHHGGGCSEEEES
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHc--------CCCEEEEe-cch----hhh--hHHHhhccccceeeec
Confidence 899999999999999999986 5667777776643 79988876 554 356 78774 8899999999
Q ss_pred CcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhhHHH
Q 016179 182 LPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARMLPI 260 (394)
Q Consensus 182 ~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~l~~ 260 (394)
+|.... ...+..++|+|+++++.. ..+.+.++++++++|+++|||+|+. +++ .
T Consensus 145 ~~~~~~----~~~k~~~~g~pvr~~~~~-------------------~~~~~~~~~~~~~~ilv~gGs~g~~~~~~---~ 198 (365)
T 3s2u_A 145 FPDTFP----ASDKRLTTGNPVRGELFL-------------------DAHARAPLTGRRVNLLVLGGSLGAEPLNK---L 198 (365)
T ss_dssp STTSSC----C---CEECCCCCCGGGCC-------------------CTTSSCCCTTSCCEEEECCTTTTCSHHHH---H
T ss_pred cccccc----CcCcEEEECCCCchhhcc-------------------chhhhcccCCCCcEEEEECCcCCccccch---h
Confidence 986532 123578999999987642 1123567788899999999999973 444 4
Q ss_pred HHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCC
Q 016179 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARL 339 (394)
Q Consensus 261 ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~ 339 (394)
+.++++.+... .+.++++++|.+ +.+ .+.+.+.+.+.++++.+ | .+||+++|++||++||+||++|+ |++++|+
T Consensus 199 ~~~al~~l~~~-~~~~vi~~~G~~-~~~-~~~~~~~~~~~~~~v~~-f-~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~ 273 (365)
T 3s2u_A 199 LPEALAQVPLE-IRPAIRHQAGRQ-HAE-ITAERYRTVAVEADVAP-F-ISDMAAAYAWADLVICRAGALTVSELTAAGL 273 (365)
T ss_dssp HHHHHHTSCTT-TCCEEEEECCTT-THH-HHHHHHHHTTCCCEEES-C-CSCHHHHHHHCSEEEECCCHHHHHHHHHHTC
T ss_pred hHHHHHhcccc-cceEEEEecCcc-ccc-cccceeccccccccccc-c-hhhhhhhhccceEEEecCCcchHHHHHHhCC
Confidence 56677766543 468889999864 333 34455556666777774 4 58999999999999999999998 9999999
Q ss_pred CEEEEE-cCChHHHHH--HHhhcc
Q 016179 340 PCVVAY-RAHFLTEWF--IRYKAK 360 (394)
Q Consensus 340 P~Iv~y-~~~~~~~~~--a~~~vk 360 (394)
|+|++. +...-+++. |+.+++
T Consensus 274 P~Ilip~p~~~~~~Q~~NA~~l~~ 297 (365)
T 3s2u_A 274 PAFLVPLPHAIDDHQTRNAEFLVR 297 (365)
T ss_dssp CEEECC-----CCHHHHHHHHHHT
T ss_pred CeEEeccCCCCCcHHHHHHHHHHH
Confidence 999873 333223333 566654
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=241.48 Aligned_cols=299 Identities=14% Similarity=0.059 Sum_probs=200.1
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEE-EEecChh--hHhccCcccccc---CcceeccHHHhhhhHHHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSF-SGVGGSM--MSEQGMKSLFPM---EDIAVMGIWELLPHIYKFRV 103 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~-~g~gg~~--m~~~g~~~~~~~---~~l~~~G~~~~l~~~~~~~~ 103 (394)
.+|||++++|+.+|.+.++.++++|++. ++ +++ ++++|++ |.+++++. +.+ .++.+++..+ .....+.+
T Consensus 24 ~m~ki~~v~Gtr~~~~~~a~li~~l~~~-~~-~~~~~~~tG~h~~~~~~~~~~-~~i~~~~~l~~~~~~~--~~~~~~~~ 98 (396)
T 3dzc_A 24 AMKKVLIVFGTRPEAIKMAPLVQQLCQD-NR-FVAKVCVTGQHREMLDQVLEL-FSITPDFDLNIMEPGQ--TLNGVTSK 98 (396)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHHC-TT-EEEEEEECCSSSHHHHHHHHH-TTCCCSEECCCCCTTC--CHHHHHHH
T ss_pred CCCeEEEEEeccHhHHHHHHHHHHHHhC-CC-CcEEEEEecccHHHHHHHHHh-cCCCCceeeecCCCCC--CHHHHHHH
Confidence 4579999999999999999999999875 54 776 5788876 44444432 121 2455544222 12224566
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC-cccccc-CcchHHHH-H-HHhhhhee
Q 016179 104 RLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP-SFWAWK-GGEARLKN-L-AAFVDHIL 179 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~-~~wa~~-~g~~r~~~-l-~~~~d~v~ 179 (394)
.+.++.+++++++||+|+++|....++..+..++.. +||+ +|+.++ ..|.|. ++....++ + .+.+|.+|
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~------~IPv-~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~ 171 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQ------QIPV-GHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHF 171 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTT------TCCE-EEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHh------CCCE-EEEECCccccccccCCcHHHHHHHHHHhcCEEE
Confidence 788899999999999999987432223222222222 7995 676443 235552 22124444 3 78899999
Q ss_pred ecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcC-CCCCCcEEEEECCCcHHHHH
Q 016179 180 CILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYS-VPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 180 ~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg-l~~~~~~IlllgGSrg~ei~ 255 (394)
+.++..++.|.+.|++ +.+||||+.|.+...... .......++++++++| ++++.+++++++ +|..+..
T Consensus 172 ~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~------~~~~~~~~~~~r~~lg~l~~~~~~vlv~~-hR~~~~~ 244 (396)
T 3dzc_A 172 APTDTSRANLLQENYNAENIFVTGNTVIDALLAVREK------IHTDMDLQATLESQFPMLDASKKLILVTG-HRRESFG 244 (396)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHH------HHHCHHHHHHHHHTCTTCCTTSEEEEEEC-SCBCCCT
T ss_pred CCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhh------cccchhhHHHHHHHhCccCCCCCEEEEEE-CCcccch
Confidence 9999999999888986 889999999876421100 0000000256778899 577778777765 4432221
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHH
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQ 335 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~ 335 (394)
+.++.++++++.+.+++|+++++++++++...++.+++..... .++.++++....++..+|++||++|+.||++++||+
T Consensus 245 ~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~-~~v~~~~~lg~~~~~~l~~~ad~vv~~SGg~~~EA~ 323 (396)
T 3dzc_A 245 GGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGV-SNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAP 323 (396)
T ss_dssp THHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTC-TTEEEECCCCHHHHHHHHHHCSEEEESCSGGGTTGG
T ss_pred hHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCC-CCEEEeCCCCHHHHHHHHHhcCEEEECCccHHHHHH
Confidence 2356788999999887889999999886544445555443322 367776432236899999999999999998778999
Q ss_pred HcCCCEEEEEcCC
Q 016179 336 LARLPCVVAYRAH 348 (394)
Q Consensus 336 a~G~P~Iv~y~~~ 348 (394)
++|+|+|+....+
T Consensus 324 a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 324 SLGKPVLVMRETT 336 (396)
T ss_dssp GGTCCEEECCSSC
T ss_pred HcCCCEEEccCCC
Confidence 9999999864443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-27 Score=235.12 Aligned_cols=291 Identities=13% Similarity=0.054 Sum_probs=197.1
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCC-CCeE-EEEecChh--hHhccCcccccc---CcceeccHHHhhhhHHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAP-LPVS-FSGVGGSM--MSEQGMKSLFPM---EDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~-~~~~-~~g~gg~~--m~~~g~~~~~~~---~~l~~~G~~~~l~~~~~~~ 102 (394)
++|||++++|+.++.+..+.|+++|++. + + ++ .++++|++ |.+++++. +.+ .++.+++..+. ....+.
T Consensus 26 ~~~kI~~v~Gtr~~~~~~a~li~~l~~~-~~~-~~~~~~~tG~h~~m~~~~~~~-~~i~~~~~l~v~~~~~~--~~~~~~ 100 (403)
T 3ot5_A 26 AKIKVMSIFGTRPEAIKMAPLVLALEKE-PET-FESTVVITAQHREMLDQVLEI-FDIKPDIDLDIMKKGQT--LAEITS 100 (403)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTC-TTT-EEEEEEECC-----CHHHHHH-TTCCCSEECCCCC-CCC--HHHHHH
T ss_pred ccceEEEEEecChhHHHHHHHHHHHHhC-CCC-CcEEEEEecCcHHHHHHHHHh-cCCCCCcccccCCCCCC--HHHHHH
Confidence 3468999999999999999999999875 4 4 66 45788876 65554432 222 23445443322 123356
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc-ccccc-CcchHHHH--HHHhhhhe
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS-FWAWK-GGEARLKN--LAAFVDHI 178 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~-~wa~~-~g~~r~~~--l~~~~d~v 178 (394)
+.+.++.+++++++||+|+++|...+++..+..++.. +||+ +|+..+. .|.|. +.....++ +.+.+|.+
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~------~IPv-~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~ 173 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQ------QKML-GHVEAGLRTWNKYSPFPEEMNRQLTGVMADIH 173 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHT------TCEE-EEESCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHh------CCCE-EEEECCccccccccCCcHHHHHHHHHHhcCEE
Confidence 7788899999999999999987432333222222322 7995 6775543 35432 11113333 47788999
Q ss_pred eecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 179 LCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 179 ~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
|+.++..++.|.+.|++ +.+||||+.|.+..... ...+.+.++++ ++.+++++ .|+|..+..
T Consensus 174 ~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~-----------~~~~~~~~~~l---~~~~~vlv-~~~r~~~~~ 238 (403)
T 3ot5_A 174 FSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQ-----------KDYHHPILENL---GDNRLILM-TAHRRENLG 238 (403)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSC-----------TTCCCHHHHSC---TTCEEEEE-CCCCHHHHT
T ss_pred ECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhh-----------hhcchHHHHhc---cCCCEEEE-EeCcccccC
Confidence 99999999999989986 88999999987652110 01123455665 45565555 567765554
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHH
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQ 335 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~ 335 (394)
+.++.+++++..+.+++|+++++++++++...++.+++..... .++.++.+....++..+|++||++|+.||++++|++
T Consensus 239 ~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~~EA~ 317 (403)
T 3ot5_A 239 EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAP 317 (403)
T ss_dssp THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHHEEEEEECCHHHHHHGG
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCCCCHHHHHHHHHhcCEEEECCccHHHHHH
Confidence 4467899999999888899999999887644445555433322 367777542135899999999999999999999999
Q ss_pred HcCCCEEEEEcCC
Q 016179 336 LARLPCVVAYRAH 348 (394)
Q Consensus 336 a~G~P~Iv~y~~~ 348 (394)
++|+|+|++.+.+
T Consensus 318 a~g~PvV~~~~~~ 330 (403)
T 3ot5_A 318 GMGVPVLVLRDTT 330 (403)
T ss_dssp GTTCCEEECCSSC
T ss_pred HhCCCEEEecCCC
Confidence 9999999874443
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=196.22 Aligned_cols=297 Identities=14% Similarity=0.051 Sum_probs=185.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCC-CCeEEEEecCh-hhHhccCcc-cccc-CcceeccHHHhhhhHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAP-LPVSFSGVGGS-MMSEQGMKS-LFPM-EDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~-~~~~~~g~gg~-~m~~~g~~~-~~~~-~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
|||++++|+.++...+..++++|+++++ + ++++..|.. .+.+..++. .+.. ..+.+.+... .....+...+.+
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFE-AKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQ--GLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHSTTCE-EEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTS--CHHHHHHHHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCCCCc-eEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCc--cHHHHHHHHHHH
Confidence 7899999998888888899999998765 5 776665542 233222221 1111 1233322111 111114445677
Q ss_pred HHHHHHhcCCCEEEEeCC--CCchHHHHHHHHHhccccCCCCCeEEEeecCc----cccccCcchHHH-HH-HHhhhhee
Q 016179 108 TIEAALLFRPHAVVTVDS--KGFSFRLLKQLRARYSHERLNGPAHFHYVAPS----FWAWKGGEARLK-NL-AAFVDHIL 179 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~--~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~----~wa~~~g~~r~~-~l-~~~~d~v~ 179 (394)
+.+++++++||+|++.+. ..++..+++ +.. ++|+ ++..... .|.+.++ +.+ ++ .+.+|.++
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a--~~~------~ip~-v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~ii 146 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAA--FYQ------RIPV-GHVEAGLRTGDLYSPWPE--EANRTLTGHLAMYHF 146 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHH--HTT------TCCE-EEESCCCCCSCTTSSTTH--HHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHH--HHH------CCCE-EEEecccccccccCCCch--HhhHHHHHhhccEEE
Confidence 888999999999998753 122222322 112 7896 4442221 1122222 333 33 67799999
Q ss_pred ecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCC----ChHHHHhhcC-CCCCCcEEEEECCCcH
Q 016179 180 CILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEG----NSEDFKNKYS-VPSGATVISLLPGSRL 251 (394)
Q Consensus 180 ~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~----~~~~~r~~lg-l~~~~~~IlllgGSrg 251 (394)
+.+++.++.+.+.|++ +.++|||+.|.+..... ... .+.++++++| ++++.+.+++++|...
T Consensus 147 ~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 216 (384)
T 1vgv_A 147 SPTETSRQNLLRENVADSRIFITGNTVIDALLWVRD----------QVMSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (384)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHH----------HTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBS
T ss_pred cCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhh----------ccccchhhhHHHHHhccccCCCCCEEEEEeCCcc
Confidence 9999999998888875 78899998775431100 000 0125677888 8766777888887432
Q ss_pred HHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHH
Q 016179 252 QEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331 (394)
Q Consensus 252 ~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~t 331 (394)
. ..+.++.++++++.+.++.|++++++++|++...++.+++..... .++.++.....+++.++|+.||++|+.||+++
T Consensus 217 ~-~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~~~ 294 (384)
T 1vgv_A 217 S-FGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVILIDPQEYLPFVWLMNHAWLILTDSGGIQ 294 (384)
T ss_dssp S-CCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHHCSEEEESSSTGG
T ss_pred c-cchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCEEEeCCCCHHHHHHHHHhCcEEEECCcchH
Confidence 1 112356788999998877789999887775433444555543332 36777521113689999999999999999887
Q ss_pred HHHHHcCCCEEEEEcCChHHHHH
Q 016179 332 VELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 332 lEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+||+++|+|+|+.+..+.....+
T Consensus 295 lEA~a~G~PvI~~~~~~~~~e~v 317 (384)
T 1vgv_A 295 EEAPSLGKPVLVMRDTTERPEAV 317 (384)
T ss_dssp GTGGGGTCCEEEESSCCSCHHHH
T ss_pred HHHHHcCCCEEEccCCCCcchhh
Confidence 79999999999765534433333
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-21 Score=188.52 Aligned_cols=265 Identities=16% Similarity=0.189 Sum_probs=174.3
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecCh----hhHhccCccc-cccCcceeccHHHhhhhHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS----MMSEQGMKSL-FPMEDIAVMGIWELLPHIYKFRVRL 105 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~----~m~~~g~~~~-~~~~~l~~~G~~~~l~~~~~~~~~~ 105 (394)
|||+++++++|||.. +..++++|.+++.+ +.++...+. .+++.|++.. ++...+...+....+.........+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQ-VRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAW 85 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCE-EEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCE-EEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHH
Confidence 899999999999999 88999999987664 777665432 1233455421 1211111112223334444455567
Q ss_pred HHHHHHHHhcCCCEEEEeCC-CCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHH-HHHHhhhheeecCc
Q 016179 106 KETIEAALLFRPHAVVTVDS-KGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLK-NLAAFVDHILCILP 183 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~-~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~-~l~~~~d~v~~~~p 183 (394)
.++.+++++++||+|++.+. +.++..++++ .. ++|++++. +..| ++ ..+ .+.+.+|.+++.++
T Consensus 86 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~--~~------~~p~v~~~--~~~~---~~--~~~~~~~~~~d~v~~~~~ 150 (364)
T 1f0k_A 86 RQARAIMKAYKPDVVLGMGGYVSGPGGLAAW--SL------GIPVVLHE--QNGI---AG--LTNKWLAKIATKVMQAFP 150 (364)
T ss_dssp HHHHHHHHHHCCSEEEECSSTTHHHHHHHHH--HT------TCCEEEEE--CSSS---CC--HHHHHHTTTCSEEEESST
T ss_pred HHHHHHHHhcCCCEEEEeCCcCchHHHHHHH--Hc------CCCEEEEe--cCCC---Cc--HHHHHHHHhCCEEEecCh
Confidence 77889999999999998652 2222222222 12 78976554 2222 22 333 45778999999887
Q ss_pred ccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHH
Q 016179 184 NEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 263 (394)
Q Consensus 184 ~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~ 263 (394)
.. +. ++.++|||+.+.+.. .+ ..+++++++++.+++++++|+.+. ++..+.+++
T Consensus 151 ~~---~~----~~~~i~n~v~~~~~~---------------~~--~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~ 204 (364)
T 1f0k_A 151 GA---FP----NAEVVGNPVRTDVLA---------------LP--LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQ 204 (364)
T ss_dssp TS---SS----SCEECCCCCCHHHHT---------------SC--CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHH
T ss_pred hh---cC----CceEeCCccchhhcc---------------cc--hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHH
Confidence 54 22 577999999776431 11 134567888888889999888764 334567788
Q ss_pred HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC-CEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCE
Q 016179 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPC 341 (394)
Q Consensus 264 a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~-~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~ 341 (394)
+++.+.+ +.++++++|+.. . +.+++...+.+. ++.+. |+ .+++.++|+.||++|+.||..++ ||+++|+|+
T Consensus 205 a~~~l~~---~~~~l~i~G~~~-~-~~l~~~~~~~~~~~v~~~-g~-~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pv 277 (364)
T 1f0k_A 205 VAAKLGD---SVTIWHQSGKGS-Q-QSVEQAYAEAGQPQHKVT-EF-IDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA 277 (364)
T ss_dssp HHHHHGG---GEEEEEECCTTC-H-HHHHHHHHHTTCTTSEEE-SC-CSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCE
T ss_pred HHHHhcC---CcEEEEEcCCch-H-HHHHHHHhhcCCCceEEe-cc-hhhHHHHHHhCCEEEECCchHHHHHHHHhCCCE
Confidence 9888854 688766666543 3 345555555442 57766 55 47899999999999999997665 999999999
Q ss_pred EEEE
Q 016179 342 VVAY 345 (394)
Q Consensus 342 Iv~y 345 (394)
|+..
T Consensus 278 i~~~ 281 (364)
T 1f0k_A 278 LFVP 281 (364)
T ss_dssp EECC
T ss_pred EEee
Confidence 8754
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-21 Score=189.62 Aligned_cols=291 Identities=16% Similarity=0.078 Sum_probs=173.2
Q ss_pred CceEEEEeCCchHHHHHHHHHHHHHhcCCCCeE-EEEecChhh--HhccCcc-cccc-CcceeccHHHhhhhHHHHHHHH
Q 016179 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS-FSGVGGSMM--SEQGMKS-LFPM-EDIAVMGIWELLPHIYKFRVRL 105 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~-~~g~gg~~m--~~~g~~~-~~~~-~~l~~~G~~~~l~~~~~~~~~~ 105 (394)
+|||++++++.++...+..++++|++. ++ .+ .+.+++..+ .+..++. .... ..+++.+ ........+...+
T Consensus 5 mmkIl~v~~~~~~~~~~~~l~~~L~~~-~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 80 (376)
T 1v4v_A 5 MKRVVLAFGTRPEATKMAPVYLALRGI-PG-LKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQ--ERQALPDLAARIL 80 (376)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTS-TT-EEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCS--SCCCHHHHHHHHH
T ss_pred ceEEEEEEeccHHHHHHHHHHHHHHhC-CC-CceEEEEcCCcHHHHHHHHHHcCCCcccccccCC--CCccHHHHHHHHH
Confidence 489999999876665577899999875 33 43 223333321 1111111 0111 1122222 1111112233445
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcc-cccc-CcchHH-HH-HHHhhhheeec
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSF-WAWK-GGEARL-KN-LAAFVDHILCI 181 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~-wa~~-~g~~r~-~~-l~~~~d~v~~~ 181 (394)
.++.+++++++||+|+++++....+..+...+.. ++|+ +|+..... |.|. ...... ++ +.+.+|.+++.
T Consensus 81 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~------~ip~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (376)
T 1v4v_A 81 PQAARALKEMGADYVLVHGDTLTTFAVAWAAFLE------GIPV-GHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAP 153 (376)
T ss_dssp HHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHT------TCCE-EEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHh------CCCE-EEEeCCCccccccCCCchHHHHHHHHHHhceeeCC
Confidence 6778889999999999986432222211112222 7895 56543322 3331 110112 22 46779999999
Q ss_pred CcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhH
Q 016179 182 LPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARML 258 (394)
Q Consensus 182 ~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l 258 (394)
++..++.+.+.|++ +.++|||+.|.+.... .+.+.++++ + +.+.+++++| |....+ .+
T Consensus 154 s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~--------------~~~~~~~~~--~-~~~~vl~~~g-r~~~~k-~~ 214 (376)
T 1v4v_A 154 TPLAKANLLKEGKREEGILVTGQTGVDAVLLAA--------------KLGRLPEGL--P-EGPYVTVTMH-RRENWP-LL 214 (376)
T ss_dssp SHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHH--------------HHCCCCTTC--C-SSCEEEECCC-CGGGGG-GH
T ss_pred CHHHHHHHHHcCCCcceEEEECCchHHHHhhhh--------------hhhHHHHhc--C-CCCEEEEEeC-cccchH-HH
Confidence 99999999888875 7789999877653110 011123333 2 3456666655 443333 46
Q ss_pred HHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHHHcC
Q 016179 259 PIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLAR 338 (394)
Q Consensus 259 ~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~a~G 338 (394)
+.++++++.+.++.|++++++++|++...++.+++..... .++.++......+++++|++||++|+.||++++||+++|
T Consensus 215 ~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~-~~v~~~g~~g~~~~~~~~~~ad~~v~~S~g~~lEA~a~G 293 (376)
T 1v4v_A 215 SDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALG 293 (376)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccC-CCEEEECCCCHHHHHHHHHhCcEEEECCcCHHHHHHHcC
Confidence 7788999998877788998888775433344555544322 367776311134899999999999999998866999999
Q ss_pred CCEEEEEcCChHHH
Q 016179 339 LPCVVAYRAHFLTE 352 (394)
Q Consensus 339 ~P~Iv~y~~~~~~~ 352 (394)
+|+|+++..+....
T Consensus 294 ~PvI~~~~~~~~~~ 307 (376)
T 1v4v_A 294 VPVVVLRNVTERPE 307 (376)
T ss_dssp CCEEECSSSCSCHH
T ss_pred CCEEeccCCCcchh
Confidence 99997655554333
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=191.02 Aligned_cols=282 Identities=14% Similarity=0.120 Sum_probs=183.8
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhH----h---ccCccccccCcceeccHHHhhhhHHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMS----E---QGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~----~---~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
-+.|+++++|....=+..+.++++|++. -+ ..++.. |++.. + .++...-+...+...+- .....+.
T Consensus 8 ~~~~~~~v~GtRpe~~k~~p~~~~l~~~-~~-~~~~~t-gqh~~~~~~~~~~~~~~i~~~~~~l~~~~~----~~~~~~~ 80 (385)
T 4hwg_A 8 HMLKVMTIVGTRPELIKLCCVISEFDKH-TK-HILVHT-GQNYAYELNQVFFDDMGIRKPDYFLEVAAD----NTAKSIG 80 (385)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHHHHHH-SE-EEEEEC-SCHHHHHHTHHHHC-CCCCCCSEECCCCCC----CSHHHHH
T ss_pred hhhheeEEEEcCHhHHHHHHHHHHHHhc-CC-EEEEEe-CCCCChhHHHHHHhhCCCCCCceecCCCCC----CHHHHHH
Confidence 3578999999998888889999999875 32 444444 45432 2 11111001111222221 1122344
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccc---cCcchHHHH--HHHhhhh
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAW---KGGEARLKN--LAAFVDH 177 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~---~~g~~r~~~--l~~~~d~ 177 (394)
+.+.++.+++++++||+|+++|.....+. +..++.+ +||+ +|+.++. +.+ .|+ .+++ +.+.+|.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~a-alaA~~~------~IPv-~h~eagl-rs~~~~~pe--e~nR~~~~~~a~~ 149 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLS-AIAAKRR------KIPI-FHMEAGN-RCFDQRVPE--EINRKIIDHISDV 149 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGG-HHHHHHT------TCCE-EEESCCC-CCSCTTSTH--HHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHH-HHHHHHh------CCCE-EEEeCCC-ccccccCcH--HHHHHHHHhhhce
Confidence 56778899999999999999874333332 2233333 7994 6775432 222 122 3443 3678899
Q ss_pred eeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHH
Q 016179 178 ILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEV 254 (394)
Q Consensus 178 v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei 254 (394)
+|+.++..++.|.+.|++ +.+||||+.|.+..... ..+++++++++|+++ ++.+++++|++ .++
T Consensus 150 ~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~-----------~~~~~~~~~~lgl~~-~~~iLvt~hr~-e~~ 216 (385)
T 4hwg_A 150 NITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMP-----------KILKSDILDKLSLTP-KQYFLISSHRE-ENV 216 (385)
T ss_dssp EEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHH-----------HHHHCCHHHHTTCCT-TSEEEEEECCC----
T ss_pred eecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhh-----------hcchhHHHHHcCCCc-CCEEEEEeCCc-hhc
Confidence 999999999999989986 88999999997642100 013456788999977 56777776554 333
Q ss_pred H--hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHH---hhcCCCCEEEecCCCcchHHHHHHHcccceehhhH
Q 016179 255 A--RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGL---IQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329 (394)
Q Consensus 255 ~--~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~---~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt 329 (394)
. +.++.+++++..+.+++ ++++++++++ ..++.+++. ... ..++.++......++..+|++||++|+.||+
T Consensus 217 ~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p--~~~~~l~~~~~~~~~-~~~v~l~~~lg~~~~~~l~~~adlvvt~SGg 292 (385)
T 4hwg_A 217 DVKNNLKELLNSLQMLIKEY-NFLIIFSTHP--RTKKRLEDLEGFKEL-GDKIRFLPAFSFTDYVKLQMNAFCILSDSGT 292 (385)
T ss_dssp --CHHHHHHHHHHHHHHHHH-CCEEEEEECH--HHHHHHHTSGGGGGT-GGGEEECCCCCHHHHHHHHHHCSEEEECCTT
T ss_pred CcHHHHHHHHHHHHHHHhcC-CeEEEEECCh--HHHHHHHHHHHHhcC-CCCEEEEcCCCHHHHHHHHHhCcEEEECCcc
Confidence 2 45678889999887655 7899999875 244445443 211 1257766432235799999999999999999
Q ss_pred HHHHHHHcCCCEEEEEc
Q 016179 330 VAVELQLARLPCVVAYR 346 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~y~ 346 (394)
+++||+++|+|+|++..
T Consensus 293 v~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 293 ITEEASILNLPALNIRE 309 (385)
T ss_dssp HHHHHHHTTCCEEECSS
T ss_pred HHHHHHHcCCCEEEcCC
Confidence 98999999999998754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=183.48 Aligned_cols=268 Identities=16% Similarity=0.097 Sum_probs=157.9
Q ss_pred CCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-cccCcceec-c--------HHHhhh
Q 016179 30 GELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPMEDIAVM-G--------IWELLP 96 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~~~l~~~-G--------~~~~l~ 96 (394)
.+|||++++.++.||++ ...|+++|++++.+ +.++..+. +.+++.|++.. ++. .++.. + ....+.
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~-V~v~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 96 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHR-VSYVTAGGFAEPVRAAGATVVPYQS-EIIDADAAEVFGSDDLGVRPH 96 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCE-EEEEECGGGHHHHHHTTCEEEECCC-STTTCCHHHHHHSSSSCHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCE-EEEEeCHHHHHHHHhcCCEEEeccc-cccccccchhhccccHHHHHH
Confidence 45899999999999999 99999999998764 76666332 13455666532 110 01000 0 001111
Q ss_pred --hHHHHHHHHHHHHHHHHhcCCCEEEEeC-CCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc---------
Q 016179 97 --HIYKFRVRLKETIEAALLFRPHAVVTVD-SKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG--------- 164 (394)
Q Consensus 97 --~~~~~~~~~~~~~~~i~~~~PD~Vi~~~-~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g--------- 164 (394)
........+.++.+.+++++||+||. | +..+...++++ +. ++|++ ++. +..+.+..+
T Consensus 97 ~~~~~~~~~~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~--~~------giP~v-~~~-~~~~~~~~~~~~~~~~~~ 165 (415)
T 3rsc_A 97 LMYLRENVSVLRATAEALDGDVPDLVLY-DDFPFIAGQLLAA--RW------RRPAV-RLS-AAFASNEHYSFSQDMVTL 165 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHH--HT------TCCEE-EEE-SSCCCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEEEE-CchhhhHHHHHHH--Hh------CCCEE-EEE-ecccccCccccccccccc
Confidence 12223344567888899999999994 6 55555555433 22 79964 443 222211100
Q ss_pred ------------chHHHHHHHhh--------------hheeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCC
Q 016179 165 ------------EARLKNLAAFV--------------DHILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPE 217 (394)
Q Consensus 165 ------------~~r~~~l~~~~--------------d~v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~ 217 (394)
..+.+.+.+.. |..++.+|.+.+.+.. .+.++.++|.++.+....
T Consensus 166 ~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~~-------- 237 (415)
T 3rsc_A 166 AGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFL-------- 237 (415)
T ss_dssp HTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCGGG--------
T ss_pred cccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcccC--------
Confidence 01222221111 6667777766554432 244578899765432110
Q ss_pred CcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhc
Q 016179 218 PCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQK 297 (394)
Q Consensus 218 ~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~ 297 (394)
. .....++++++|++++||++.+..+.+..+++++ .+ .+ .++++++|++.+.+. +..
T Consensus 238 ----------~---~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al---~~-~~-~~~v~~~g~~~~~~~-----l~~ 294 (415)
T 3rsc_A 238 ----------G---EWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAF---DG-QP-WHVVMTLGGQVDPAA-----LGD 294 (415)
T ss_dssp ----------C---CCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHH---TT-SS-CEEEEECTTTSCGGG-----GCC
T ss_pred ----------c---CccccCCCCCEEEEECCCCCCChHHHHHHHHHHH---hc-CC-cEEEEEeCCCCChHH-----hcC
Confidence 0 0011135678999999998754333444454443 32 23 889998886533221 222
Q ss_pred CCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEE
Q 016179 298 WPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVA 344 (394)
Q Consensus 298 ~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~ 344 (394)
...++++.. + .+++ ++|+.||++|+.+|+.|+ |++++|+|+|++
T Consensus 295 ~~~~v~~~~-~-~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 295 LPPNVEAHR-W-VPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp CCTTEEEES-C-CCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEEC
T ss_pred CCCcEEEEe-c-CCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEe
Confidence 334687774 4 3555 999999999999998775 999999999986
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=177.56 Aligned_cols=270 Identities=16% Similarity=0.102 Sum_probs=158.7
Q ss_pred CceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-ccc--Ccc------eeccHHHhhhh-
Q 016179 31 ELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPM--EDI------AVMGIWELLPH- 97 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~--~~l------~~~G~~~~l~~- 97 (394)
++||++++.++.||++ ...|+++|++++.+ +.++.... +.+++.|++.. ++. ... ........++.
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~Ghe-V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHR-ITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLV 82 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCE-EEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCE-EEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHH
Confidence 4599999999999999 88999999998764 66655321 13455666532 110 000 00011112221
Q ss_pred -HHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcch----------
Q 016179 98 -IYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEA---------- 166 (394)
Q Consensus 98 -~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~---------- 166 (394)
.......+.++.+.+++++||+||+.++..+...++++ +. ++|+ +++ .+..|.|..+..
T Consensus 83 ~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~--~~------giP~-v~~-~~~~~~~~~~~~~~~~~~~~~~ 152 (402)
T 3ia7_A 83 YVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAA--RW------DRPA-VRL-TGGFAANEHYSLFKELWKSNGQ 152 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHH--HH------TCCE-EEE-ESSCCCBTTBCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHH--hh------CCCE-EEE-ecccccCccccccccccccccc
Confidence 22223345678888999999999863244344444332 22 7995 454 355554432211
Q ss_pred -----------HHHHH-HHh------------h-hheeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCCCcc
Q 016179 167 -----------RLKNL-AAF------------V-DHILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPEPCE 220 (394)
Q Consensus 167 -----------r~~~l-~~~------------~-d~v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~ 220 (394)
+.+++ .++ . |..++.+|.+.+.... .+.++.++|+++.+.-..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~~----------- 221 (402)
T 3ia7_A 153 RHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGRDGQ----------- 221 (402)
T ss_dssp CCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC---------------
T ss_pred cChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCCCCCcccC-----------
Confidence 11111 111 1 6677777776655433 355688999765332110
Q ss_pred cccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC
Q 016179 221 LKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV 300 (394)
Q Consensus 221 ~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~ 300 (394)
. .....++++++|++++||++.+..+.++.++++ +.+ . +.++++++|++.+.+ . +.+...
T Consensus 222 -------~---~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~~g~~~~~~-~----~~~~~~ 281 (402)
T 3ia7_A 222 -------P---GWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQA---FAD-T-PWHVVMAIGGFLDPA-V----LGPLPP 281 (402)
T ss_dssp -------C---CCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHH---HTT-S-SCEEEEECCTTSCGG-G----GCSCCT
T ss_pred -------C---CCcccCCCCCEEEEECCCCCcchHHHHHHHHHH---Hhc-C-CcEEEEEeCCcCChh-h----hCCCCC
Confidence 0 001113567899999999986533344444444 332 2 388888888653321 1 222334
Q ss_pred CEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEE
Q 016179 301 PSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAY 345 (394)
Q Consensus 301 ~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y 345 (394)
++++.. + .+++ ++|+.||++|+.+|+.|+ |++++|+|+|+++
T Consensus 282 ~v~~~~-~-~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 282 NVEAHQ-W-IPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp TEEEES-C-CCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECG
T ss_pred cEEEec-C-CCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeC
Confidence 677764 4 4666 999999999999998885 9999999999863
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=184.91 Aligned_cols=269 Identities=14% Similarity=0.091 Sum_probs=156.1
Q ss_pred CCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-cccCcceecc---------------
Q 016179 30 GELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPMEDIAVMG--------------- 90 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~~~l~~~G--------------- 90 (394)
.+|||++++++++||++ +.+|+++|++++.+ +.+++..+ +.+++.|++.. ++. .+ ..+
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~Ghe-V~v~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHE-VTFATGEGFAGTLRKLGFEPVATGM-PV-FDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCE-EEEEECGGGHHHHHHTTCEEEECCC-CH-HHHHHHHHHHHHSCSCCT
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCE-EEEEccHHHHHHHHhcCCceeecCc-cc-ccchhhhhhhhhcccCCc
Confidence 56899999999999999 88999999998764 66665432 12345565432 110 00 001
Q ss_pred ---HHHhhhhHHHHHHH------HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccc
Q 016179 91 ---IWELLPHIYKFRVR------LKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAW 161 (394)
Q Consensus 91 ---~~~~l~~~~~~~~~------~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~ 161 (394)
....+..+...+.. +.++.+++++++||+|++.+ ..+...++++. . ++|+++++.....|.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~-~~~~~~~aa~~--~------giP~v~~~~~~~~~~~ 166 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEI-SNYGAGLAALK--A------GIPTICHGVGRDTPDD 166 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHH--H------TCCEEEECCSCCCCSH
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECc-hhhHHHHHHHH--c------CCCEEEecccccCchh
Confidence 11222222333222 37788999999999998864 23344443332 2 7997554433322211
Q ss_pred cCcchH----HHH-HH------------HhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccC
Q 016179 162 KGGEAR----LKN-LA------------AFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKME 224 (394)
Q Consensus 162 ~~g~~r----~~~-l~------------~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~ 224 (394)
.. .+ .++ +. ..+|.+++.+|.+.+.+... ....|+|++.....
T Consensus 167 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------- 226 (412)
T 3otg_A 167 LT--RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFR---ARPRRHELRPVPFA--------------- 226 (412)
T ss_dssp HH--HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHH---TCTTEEECCCCCCC---------------
T ss_pred hh--HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCccc---CCCCcceeeccCCC---------------
Confidence 10 01 111 11 25677889998877665431 11234454322110
Q ss_pred CChHHHHhhc--CCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCE
Q 016179 225 GNSEDFKNKY--SVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302 (394)
Q Consensus 225 ~~~~~~r~~l--gl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v 302 (394)
....+.++ ..+++.++|++++||++.... ..+.++++.+.+ .+.++++++|++... +.+ .+...++
T Consensus 227 --~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~---~~~~~~~~~l~~--~~~~~~~~~g~~~~~-~~l----~~~~~~v 294 (412)
T 3otg_A 227 --EQGDLPAWLSSRDTARPLVYLTLGTSSGGTV---EVLRAAIDGLAG--LDADVLVASGPSLDV-SGL----GEVPANV 294 (412)
T ss_dssp --CCCCCCGGGGGSCTTSCEEEEECTTTTCSCH---HHHHHHHHHHHT--SSSEEEEECCSSCCC-TTC----CCCCTTE
T ss_pred --CCCCCCCccccccCCCCEEEEEcCCCCcCcH---HHHHHHHHHHHc--CCCEEEEEECCCCCh-hhh----ccCCCcE
Confidence 00001122 235677899999999863222 234444444543 267888888864311 112 2233367
Q ss_pred EEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEE
Q 016179 303 ILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAY 345 (394)
Q Consensus 303 ~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y 345 (394)
.+. ++ . ++.++|+.||++|+.||..|+ ||+++|+|+|++.
T Consensus 295 ~~~-~~-~-~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 295 RLE-SW-V-PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp EEE-SC-C-CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECC
T ss_pred EEe-CC-C-CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecC
Confidence 776 54 3 799999999999999996554 9999999999763
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-18 Score=170.18 Aligned_cols=297 Identities=13% Similarity=0.062 Sum_probs=172.5
Q ss_pred cCCCceEEEEeCCchHHHHHHHHHHHHHhcCCC--CeEEEEecCh-hhHh-----ccCccccccCcceeccHHHhhhhHH
Q 016179 28 KDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPL--PVSFSGVGGS-MMSE-----QGMKSLFPMEDIAVMGIWELLPHIY 99 (394)
Q Consensus 28 ~~~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~--~~~~~g~gg~-~m~~-----~g~~~~~~~~~l~~~G~~~~l~~~~ 99 (394)
|+.+|||++++++.++...+..++++|+++ ++ ++.++..+.. .+.+ .++...+ .+...+ .......
T Consensus 5 m~~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~ 78 (375)
T 3beo_A 5 MTERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQHRQMLDQVLSIFGITPDF---DLNIMK--DRQTLID 78 (375)
T ss_dssp CSSCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSSSHHHHHHHHHHTCCCSE---ECCCCC--TTCCHHH
T ss_pred CCcCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCCHHHHHHHHHHcCCCCcc---ccccCC--CcccHHH
Confidence 345689999997754444467899999876 31 1333433321 2211 2322101 111111 1111223
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc----cccccCcchHHHH-HHHh
Q 016179 100 KFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS----FWAWKGGEARLKN-LAAF 174 (394)
Q Consensus 100 ~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~----~wa~~~g~~r~~~-l~~~ 174 (394)
.+.+.+.++.+++++++||+|++.+. .++...+..+.+. .++|+ +|..... .|.+.+. ...++ +.+.
T Consensus 79 ~~~~~~~~l~~~l~~~~pDvv~~~~~-~~~~~~~~~~~~~-----~~ip~-v~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 150 (375)
T 3beo_A 79 ITTRGLEGLDKVMKEAKPDIVLVHGD-TTTTFIASLAAFY-----NQIPV-GHVEAGLRTWDKYSPYPE-EMNRQLTGVM 150 (375)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEETT-SHHHHHHHHHHHH-----TTCCE-EEESCCCCCSCTTSSTTH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCC-chHHHHHHHHHHH-----HCCCE-EEEecccccccccCCChh-HhhhhHHhhh
Confidence 34455667888899999999998542 1222222222222 17896 4543211 1111111 12233 3567
Q ss_pred hhheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcH
Q 016179 175 VDHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRL 251 (394)
Q Consensus 175 ~d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg 251 (394)
+|.+++.+++.++.+.+.|++ +.++|||+.|... +.+ ...++.+.++++ + +.+.+++.+|...
T Consensus 151 ~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~-~~~----------~~~~~~~~~~~~--~-~~~~vl~~~gr~~ 216 (375)
T 3beo_A 151 ADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALK-TTV----------KETYSHPVLEKL--G-NNRLVLMTAHRRE 216 (375)
T ss_dssp CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHH-HHC----------CSSCCCHHHHTT--T-TSEEEEEECCCGG
T ss_pred hheeeCCCHHHHHHHHHcCCCcccEEEECChhHhhhh-hhh----------hhhhhHHHHHhc--c-CCCeEEEEecccc
Confidence 999999999999998888874 7889999666432 111 001233455554 2 4456666666433
Q ss_pred HHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHH
Q 016179 252 QEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331 (394)
Q Consensus 252 ~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~t 331 (394)
+..+.+..++++++.+.++.|++++++..+++..+.+.+++.+... .++.+.......++.++|+.||++|+.||+++
T Consensus 217 -~~~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~sg~~~ 294 (375)
T 3beo_A 217 -NLGEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDY-GRIHLIEPLDVIDFHNVAARSYLMLTDSGGVQ 294 (375)
T ss_dssp -GTTHHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTCSEEEECCHHHH
T ss_pred -cchhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhcc-CCEEEeCCCCHHHHHHHHHhCcEEEECCCChH
Confidence 2213467888999998877788998776565332334444433322 36777532113589999999999999999987
Q ss_pred HHHHHcCCCEEEEEcCChHHHHH
Q 016179 332 VELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 332 lEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+||+++|+|+|..+..+.....+
T Consensus 295 lEA~a~G~Pvi~~~~~~~~~e~v 317 (375)
T 3beo_A 295 EEAPSLGVPVLVLRDTTERPEGI 317 (375)
T ss_dssp HHHHHHTCCEEECSSCCSCHHHH
T ss_pred HHHHhcCCCEEEecCCCCCceee
Confidence 89999999998765534444333
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5e-18 Score=167.02 Aligned_cols=269 Identities=15% Similarity=0.127 Sum_probs=144.6
Q ss_pred CceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCcccccc--Cccee-----------------
Q 016179 31 ELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSLFPM--EDIAV----------------- 88 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~~~~--~~l~~----------------- 88 (394)
+|||+|++.+++||++ ...|+++|++++++ +.++..+. +.++..|++.. ++ .....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~Ghe-V~v~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHE-VLIAAPPELQATAHGAGLTTA-GIRGNDRTGDTGGTTQLRFPNPAFGQ 78 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCE-EEEEECHHHHHHHHHBTCEEE-EC--------------CCSCCGGGGC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCE-EEEecChhhHHHHHhCCCcee-eecCCccchhhhhhhccccccccccc
Confidence 4899999999999999 78899999998875 77766432 13556676542 11 00000
Q ss_pred ---ccHHHhhhhHH-----HHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccc
Q 016179 89 ---MGIWELLPHIY-----KFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA 160 (394)
Q Consensus 89 ---~G~~~~l~~~~-----~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa 160 (394)
.++.+.+.... .+...+.++.+++++++||+|++. ...+...++++ .. ++|++.++.....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~-~~~~~~~~aa~--~~------giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 79 RDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVD-VCALIGRVLGG--LL------DLPVVLHRWGVDPTA 149 (391)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE-TTCHHHHHHHH--HT------TCCEEEECCSCCCTT
T ss_pred ccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeC-cchhHHHHHHH--Hh------CCCEEEEecCCcccc
Confidence 01111111110 111126678899999999999874 33444444433 22 799643321111110
Q ss_pred ccCcchHHHHHHHhh-----------hheeecCcccHHHHHh-cCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChH
Q 016179 161 WKGGEARLKNLAAFV-----------DHILCILPNEEAICRL-NGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSE 228 (394)
Q Consensus 161 ~~~g~~r~~~l~~~~-----------d~v~~~~p~~~~~~~~-~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (394)
+........++.+.. |.++..+|.+.+.... .+.++.|+ |..+. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~---------------------~ 206 (391)
T 3tsa_A 150 GPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYV--PYNGS---------------------G 206 (391)
T ss_dssp THHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCC--CCCCC---------------------E
T ss_pred ccccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeee--cCCCC---------------------c
Confidence 000000011122222 3344555544333221 11112232 11000 0
Q ss_pred HHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCC
Q 016179 229 DFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGG 308 (394)
Q Consensus 229 ~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~ 308 (394)
.....+..+++.++|+++.||++.. +.....+++++.+. ++.|+++++++++++. . +.+ .....++++. ++
T Consensus 207 ~~~~~~~~~~~~~~vlv~~G~~~~~-~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~-~-~~l----~~~~~~v~~~-~~ 277 (391)
T 3tsa_A 207 AFPAWGAARTSARRVCICMGRMVLN-ATGPAPLLRAVAAA-TELPGVEAVIAVPPEH-R-ALL----TDLPDNARIA-ES 277 (391)
T ss_dssp ECCGGGSSCCSSEEEEEECCHHHHH-HHCSHHHHHHHHHH-HTSTTEEEEEECCGGG-G-GGC----TTCCTTEEEC-CS
T ss_pred CCCchhhcCCCCCEEEEEcCCCCCc-ccchHHHHHHHHHh-ccCCCeEEEEEECCcc-h-hhc----ccCCCCEEEe-cc
Confidence 0001122245678999999998642 11102233444444 5567899999988632 1 112 2233467766 43
Q ss_pred CcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEE
Q 016179 309 SSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVA 344 (394)
Q Consensus 309 ~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~ 344 (394)
.+..++|+.||++|+.+|+.|+ |++++|+|+|++
T Consensus 278 --~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 278 --VPLNLFLRTCELVICAGGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp --CCGGGTGGGCSEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred --CCHHHHHhhCCEEEeCCCHHHHHHHHHhCCCEEec
Confidence 2567789999999999998665 999999999986
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-16 Score=158.48 Aligned_cols=284 Identities=11% Similarity=0.060 Sum_probs=154.8
Q ss_pred CCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecCh--hhHhccCccccccCc-ce---------eccHHHhhh
Q 016179 30 GELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS--MMSEQGMKSLFPMED-IA---------VMGIWELLP 96 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~--~m~~~g~~~~~~~~~-l~---------~~G~~~~l~ 96 (394)
++|||++++++++||++ ..+++++|++++.+ +.++..... .+++.|++.. ++.. .+ ..++.+.+.
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~-V~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHR-VTYAIPPVFADKVAATGPRPV-LYHSTLPGPDADPEAWGSTLLDNVE 83 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCE-EEEEECGGGHHHHHTTSCEEE-ECCCCSCCTTSCGGGGCSSHHHHHH
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCe-EEEEeCHHHHHHHHhCCCEEE-EcCCcCccccccccccchhhHHHHH
Confidence 35799999999999999 88999999988664 666554321 2345565432 1111 00 012222222
Q ss_pred hHHH-HHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccc-cc------------
Q 016179 97 HIYK-FRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA-WK------------ 162 (394)
Q Consensus 97 ~~~~-~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa-~~------------ 162 (394)
.+.. ....+.++.+++++++||+||+ |+..+...++++ .. ++|+++++..+..|. |.
T Consensus 84 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~-d~~~~~~~~~A~--~~------giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (430)
T 2iyf_A 84 PFLNDAIQALPQLADAYADDIPDLVLH-DITSYPARVLAR--RW------GVPAVSLSPNLVAWKGYEEEVAEPMWREPR 154 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEE-ETTCHHHHHHHH--HH------TCCEEEEESSCCCCTTHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEE-CCccHHHHHHHH--Hc------CCCEEEEecccccccccccccccchhhhhc
Confidence 2211 2344667888889999999996 433333333332 22 789755442221121 10
Q ss_pred --Ccc----hHHHHH-HH------------hhhheeecCcccHHHH-HhcCCC-eEEEcCCCchhhhhhcCCCCCCCccc
Q 016179 163 --GGE----ARLKNL-AA------------FVDHILCILPNEEAIC-RLNGLA-ATFVGHPVVEDCLELNLGKGPEPCEL 221 (394)
Q Consensus 163 --~g~----~r~~~l-~~------------~~d~v~~~~p~~~~~~-~~~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~ 221 (394)
++. ...+++ .+ .+|.+++.++.+.+.. .....+ +.++|+++...-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~------------- 221 (430)
T 2iyf_A 155 QTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAE------------- 221 (430)
T ss_dssp HSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC------------------
T ss_pred cchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCCC-------------
Confidence 000 012222 22 2566777766554433 222335 7888864421100
Q ss_pred ccCCChHHHHhhcCC-CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC
Q 016179 222 KMEGNSEDFKNKYSV-PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV 300 (394)
Q Consensus 222 ~~~~~~~~~r~~lgl-~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~ 300 (394)
. .++.. +++.++|+++.||.+....+.+..++ +.+.+ .++.++++++|.+...+ .+ .....
T Consensus 222 -----~----~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~---~~l~~-~~~~~~~~~~G~~~~~~-~l----~~~~~ 283 (430)
T 2iyf_A 222 -----E----GGWQRPAGAEKVVLVSLGSAFTKQPAFYRECV---RAFGN-LPGWHLVLQIGRKVTPA-EL----GELPD 283 (430)
T ss_dssp -----C----CCCCCCTTCSEEEEEECTTTCC-CHHHHHHHH---HHHTT-CTTEEEEEECC---CGG-GG----CSCCT
T ss_pred -----C----CCCccccCCCCeEEEEcCCCCCCcHHHHHHHH---HHHhc-CCCeEEEEEeCCCCChH-Hh----ccCCC
Confidence 0 01111 24567899999998732223333333 33432 25788888877543221 12 22334
Q ss_pred CEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 301 PSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 301 ~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
++.+.. + .+++ ++|+.||++|+.+|..|+ |++++|+|+|+++ ...-.+..++++.
T Consensus 284 ~v~~~~-~-~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p-~~~~q~~~a~~~~ 339 (430)
T 2iyf_A 284 NVEVHD-W-VPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVP-QAVDQFGNADMLQ 339 (430)
T ss_dssp TEEEES-S-CCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECC-CSHHHHHHHHHHH
T ss_pred CeEEEe-c-CCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECC-CccchHHHHHHHH
Confidence 677764 4 4666 899999999999998665 9999999999864 4443344456554
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-15 Score=151.02 Aligned_cols=303 Identities=12% Similarity=0.045 Sum_probs=179.0
Q ss_pred CceEEEEeCC-----chH-HHHHHHHHHHHHhcCCCCeEEEEecChhh----------------------HhccCccc-c
Q 016179 31 ELRVFIVAGE-----VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMM----------------------SEQGMKSL-F 81 (394)
Q Consensus 31 ~~kIlI~aG~-----~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m----------------------~~~g~~~~-~ 81 (394)
+|||++++.. .|| ..+...++++|.+++.+ +.++....+.. ...|++.. +
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHE-VLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCE-EEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 6899988843 455 55588899999998775 88776543322 11222211 1
Q ss_pred ccCccee---cc-HHHh-hhhHHHHHHHHHHHHHHH--HhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEee
Q 016179 82 PMEDIAV---MG-IWEL-LPHIYKFRVRLKETIEAA--LLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYV 154 (394)
Q Consensus 82 ~~~~l~~---~G-~~~~-l~~~~~~~~~~~~~~~~i--~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv 154 (394)
+...+.. .+ +... ...+..+.+.+.+..+.+ +..+||+|++.++ ....++..+++.. ++|++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~--~~~~~~~~~~~~~-----~~~~v~~~- 152 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW--HTVFAGALIKKYF-----KIPAVFTI- 152 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESG--GGHHHHHHHHHHH-----CCCEEEEE-
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecch--hhhhhHHHHhhcc-----CCCEEEEe-
Confidence 1100000 00 1111 222333333333333333 3569999998753 2333333333221 68965443
Q ss_pred cCcccc-----------------ccCcchHHHHHHHhhhheeecCcccHHHHHh----cCCCeEEEcCCCchhhhhhcCC
Q 016179 155 APSFWA-----------------WKGGEARLKNLAAFVDHILCILPNEEAICRL----NGLAATFVGHPVVEDCLELNLG 213 (394)
Q Consensus 155 ~~~~wa-----------------~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~~----~g~~~~~vG~Pv~~~~~~~~~~ 213 (394)
+..|. +.......+.+.+.+|.+++.++..++.+.. ...++.++.|++..........
T Consensus 153 -h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~ 231 (439)
T 3fro_A 153 -HRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYL 231 (439)
T ss_dssp -SCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGS
T ss_pred -cccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccc
Confidence 32221 1000012345677899999999987765322 3346778888775432210000
Q ss_pred CCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhC--CCeEEEEEeCCCcChHHHH
Q 016179 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF--PELITVIHVAPNRHVENYI 291 (394)
Q Consensus 214 ~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~--~~~~~vi~~g~~~~~~~~l 291 (394)
. ......+.++++++|++++ ++|+.+| +-.... +.+..++++++.+.++. +++++++++.+...+.+.+
T Consensus 232 ~------~~~~~~~~~~~~~~~~~~~-~~i~~~G-~~~~~~-Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l 302 (439)
T 3fro_A 232 T------GSRDERKKSLLSKFGMDEG-VTFMFIG-RFDRGQ-KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWA 302 (439)
T ss_dssp C------SCHHHHHHHHHHHHTCCSC-EEEEEEC-CSSCTT-BCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHH
T ss_pred c------chhhhhHHHHHHHcCCCCC-cEEEEEc-cccccc-ccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHH
Confidence 0 0001135678889999887 7777764 332022 34678889999987765 7899999887654444667
Q ss_pred HHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 292 TGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 292 ~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++...+.+ ++.++.|+. .+++.++|++||++|..| |.+.+||+++|+|+|. .+.+.....+
T Consensus 303 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~-s~~~~~~e~~ 369 (439)
T 3fro_A 303 RSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA-SAVGGLRDII 369 (439)
T ss_dssp HHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEE-ESSTHHHHHC
T ss_pred HHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEE-cCCCCcceeE
Confidence 77776766 666565633 567999999999999988 6677799999999886 5777666554
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-15 Score=148.32 Aligned_cols=287 Identities=10% Similarity=0.020 Sum_probs=171.6
Q ss_pred cCCCceEEEEeCC----chHHHH-HHHHHHHHHhcCCCCeEEEEecChhh--H----hccCccccccCcceeccHHHhhh
Q 016179 28 KDGELRVFIVAGE----VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMM--S----EQGMKSLFPMEDIAVMGIWELLP 96 (394)
Q Consensus 28 ~~~~~kIlI~aG~----~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m--~----~~g~~~~~~~~~l~~~G~~~~l~ 96 (394)
|+.+|||++++.. .||.-. ...+++.|+ +.+ +.++....... . ..++... .++.... +.
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~--g~~-v~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~ 70 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQD--PES-IVVFASTQNAEEAHAYDKTLDYEVI----RWPRSVM---LP 70 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSC--GGG-EEEEEECSSHHHHHHHHTTCSSEEE----EESSSSC---CS
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhc--CCe-EEEEECCCCccchhhhccccceEEE----Ecccccc---cc
Confidence 3467899998862 356444 778988883 343 77776654322 1 1222211 1111111 11
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc--c-hHHHHHHH
Q 016179 97 HIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG--E-ARLKNLAA 173 (394)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g--~-~r~~~l~~ 173 (394)
......++.+++++.+||+|++.+. .....++..+++. ++|.+++......+.|... . ...+++.+
T Consensus 71 ----~~~~~~~l~~~~~~~~~Dvv~~~~~-~~~~~~~~~~~~~------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 139 (394)
T 3okp_A 71 ----TPTTAHAMAEIIREREIDNVWFGAA-APLALMAGTAKQA------GASKVIASTHGHEVGWSMLPGSRQSLRKIGT 139 (394)
T ss_dssp ----CHHHHHHHHHHHHHTTCSEEEESSC-TTGGGGHHHHHHT------TCSEEEEECCSTHHHHTTSHHHHHHHHHHHH
T ss_pred ----chhhHHHHHHHHHhcCCCEEEECCc-chHHHHHHHHHhc------CCCcEEEEeccchhhhhhcchhhHHHHHHHH
Confidence 1133455778888999999997542 2222233333433 5773343222222112111 0 11234578
Q ss_pred hhhheeecCcccHHHHHhc-CC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCc
Q 016179 174 FVDHILCILPNEEAICRLN-GL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSR 250 (394)
Q Consensus 174 ~~d~v~~~~p~~~~~~~~~-g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSr 250 (394)
.+|.+++.++..++.+.+. +. ++.++.|++...... +. .+..+.+.++++|++++.++|+.+|.-.
T Consensus 140 ~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 208 (394)
T 3okp_A 140 EVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFT--PA---------TPEDKSATRKKLGFTDTTPVIACNSRLV 208 (394)
T ss_dssp HCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSC--CC---------CHHHHHHHHHHTTCCTTCCEEEEESCSC
T ss_pred hCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcC--CC---------CchhhHHHHHhcCCCcCceEEEEEeccc
Confidence 8999999999999888663 33 467788887554321 00 0123567889999998888888775422
Q ss_pred HHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh---
Q 016179 251 LQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 251 g~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S--- 327 (394)
+ .+.+..++++++.+.++.+++++++++.+. ..+.+++...+...++.+......+++.++|+.||++|..|
T Consensus 209 --~-~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~ 283 (394)
T 3okp_A 209 --P-RKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTR 283 (394)
T ss_dssp --G-GGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCB
T ss_pred --c-ccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccc
Confidence 1 234677889999998888899998887653 23455555433333677764321378999999999999855
Q ss_pred ---------hHHHHHHHHcCCCEEEEEcCChHHH
Q 016179 328 ---------GTVAVELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 328 ---------Gt~tlEa~a~G~P~Iv~y~~~~~~~ 352 (394)
|.+.+||+++|+|+|. .+.+....
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~-~~~~~~~e 316 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIA-GTSGGAPE 316 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEE-CSSTTGGG
T ss_pred cccccccccCcHHHHHHHcCCCEEE-eCCCChHH
Confidence 3455699999999886 55555443
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-15 Score=150.57 Aligned_cols=296 Identities=14% Similarity=0.083 Sum_probs=170.4
Q ss_pred CCceEEEEeC-----------CchHHH-HHHHHHHHHHhcCCCCeEEEEecCh-hhH-----hccCccc-cccCcceecc
Q 016179 30 GELRVFIVAG-----------EVSGDS-IGSRLMSAMKKLAPLPVSFSGVGGS-MMS-----EQGMKSL-FPMEDIAVMG 90 (394)
Q Consensus 30 ~~~kIlI~aG-----------~~sGh~-~a~~l~~~L~~~~~~~~~~~g~gg~-~m~-----~~g~~~~-~~~~~l~~~G 90 (394)
.+|||++++. +.||.- +...++++|.+++.+ +.++..... ... ..++... ++.......+
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~ 97 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIE-VDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLS 97 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCE-EEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCE-EEEEecCCCCCCcccccccCCeEEEEecCCCccccc
Confidence 5689999885 346654 488999999987664 777765432 111 1222211 1111000000
Q ss_pred HHHhhhhHHHHHHHHHHHHHH-HHhc-CCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc----
Q 016179 91 IWELLPHIYKFRVRLKETIEA-ALLF-RPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG---- 164 (394)
Q Consensus 91 ~~~~l~~~~~~~~~~~~~~~~-i~~~-~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g---- 164 (394)
.......+..+. ..+.+. +++. +||+|++.++ ....++..+++.. ++|++++. +..|.+...
T Consensus 98 ~~~~~~~~~~~~---~~~~~~~~~~~~~~Div~~~~~--~~~~~~~~~~~~~-----~~p~v~~~--h~~~~~~~~~~~~ 165 (438)
T 3c48_A 98 KEELPTQLAAFT---GGMLSFTRREKVTYDLIHSHYW--LSGQVGWLLRDLW-----RIPLIHTA--HTLAAVKNSYRDD 165 (438)
T ss_dssp GGGGGGGHHHHH---HHHHHHHHHHTCCCSEEEEEHH--HHHHHHHHHHHHH-----TCCEEEEC--SSCHHHHSCC---
T ss_pred hhHHHHHHHHHH---HHHHHHHHhccCCCCEEEeCCc--cHHHHHHHHHHHc-----CCCEEEEe--cCCcccccccccc
Confidence 111122222222 223343 4444 4999998642 2222232233221 68965433 333221100
Q ss_pred --------chHH-HHHHHhhhheeecCcccHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHH
Q 016179 165 --------EARL-KNLAAFVDHILCILPNEEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFK 231 (394)
Q Consensus 165 --------~~r~-~~l~~~~d~v~~~~p~~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r 231 (394)
.... +.+.+.+|.+++.++..++.+.+ +|++ +.++.|++..... .+. ....+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~--~~~---------~~~~~~~~r 234 (438)
T 3c48_A 166 SDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELY--SPG---------NDRATERSR 234 (438)
T ss_dssp -CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTS--CCC-------------CHHHH
T ss_pred cCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccccc--CCc---------ccchhhhhH
Confidence 0011 23467899999999999988866 6764 6788888754322 110 001223488
Q ss_pred hhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCC--CeEEEEEeCCC--cChHHHHHHHhhcCCC--CEEEe
Q 016179 232 NKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP--ELITVIHVAPN--RHVENYITGLIQKWPV--PSILV 305 (394)
Q Consensus 232 ~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~--~~~~vi~~g~~--~~~~~~l~~~~~~~~~--~v~~~ 305 (394)
++++++++.++|+.+|. ... .+....++++++.+.++.| ++++++++... ....+.+++...+.+. ++.+.
T Consensus 235 ~~~~~~~~~~~i~~~G~-~~~--~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~ 311 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGR-LQP--FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFL 311 (438)
T ss_dssp HHTTCCSSSEEEEEESC-BSG--GGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEE
T ss_pred HhcCCCCCCcEEEEEee-ecc--cCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEc
Confidence 89999888888777753 321 2446788899999987776 78988887611 0123345555555443 57766
Q ss_pred cCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 306 PGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 306 ~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|+. .+++.++|+.||++|..| |.+.+||+++|+|+|+ .+.+.....+
T Consensus 312 -g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~-~~~~~~~e~i 364 (438)
T 3c48_A 312 -DPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIA-ARVGGLPIAV 364 (438)
T ss_dssp -CCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEE-ESCTTHHHHS
T ss_pred -CCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEe-cCCCChhHHh
Confidence 442 368999999999999988 6777799999999776 5666655544
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-15 Score=150.98 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=66.8
Q ss_pred CCCCcEEEEECCCcHHH---HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchH
Q 016179 237 PSGATVISLLPGSRLQE---VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLK 313 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~e---i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~ 313 (394)
.+++++|+++.||.+.. .++.+..++++++.+ ++++++.++++ +.++ + .+...++.+.. + .++
T Consensus 264 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~-~~~~-l----~~~~~~v~~~~-~-~~~- 329 (441)
T 2yjn_A 264 EPERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQ-QLEG-V----ANIPDNVRTVG-F-VPM- 329 (441)
T ss_dssp CCSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTT-TTSS-C----SSCCSSEEECC-S-CCH-
T ss_pred CCCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCc-chhh-h----ccCCCCEEEec-C-CCH-
Confidence 45678999999999864 345555566665432 58888888753 2211 1 12233677664 4 344
Q ss_pred HHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 314 YDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 314 ~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.++|..||++|+.+|..|+ |++++|+|+|++ +...--...++++.
T Consensus 330 ~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~-p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 330 HALLPTCAATVHHGGPGSWHTAAIHGVPQVIL-PDGWDTGVRAQRTQ 375 (441)
T ss_dssp HHHGGGCSEEEECCCHHHHHHHHHTTCCEEEC-CCSHHHHHHHHHHH
T ss_pred HHHHhhCCEEEECCCHHHHHHHHHhCCCEEEe-CCcccHHHHHHHHH
Confidence 7899999999999998776 999999999986 44332233455444
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-14 Score=143.61 Aligned_cols=109 Identities=11% Similarity=0.070 Sum_probs=71.3
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHH
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAF 317 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 317 (394)
+++++|++..||.+...++.+..++++ +.+ .+.++++.+|++.+.++ + .....++.+.. + .+++ ++|
T Consensus 253 ~~~~~v~v~~Gs~~~~~~~~~~~~~~a---l~~--~~~~~~~~~g~~~~~~~-~----~~~~~~v~~~~-~-~~~~-~~l 319 (424)
T 2iya_A 253 DGRPVLLIALGSAFTDHLDFYRTCLSA---VDG--LDWHVVLSVGRFVDPAD-L----GEVPPNVEVHQ-W-VPQL-DIL 319 (424)
T ss_dssp SSCCEEEEECCSSSCCCHHHHHHHHHH---HTT--CSSEEEEECCTTSCGGG-G----CSCCTTEEEES-S-CCHH-HHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH---Hhc--CCcEEEEEECCcCChHH-h----ccCCCCeEEec-C-CCHH-HHH
Confidence 456899999999974223334444443 432 46888888886433221 1 22334677774 3 4566 899
Q ss_pred HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 318 SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 318 ~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
+.||++|+.+|..|+ |++++|+|+|+++.. .-.+..++++.+
T Consensus 320 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~-~dQ~~na~~l~~ 362 (424)
T 2iya_A 320 TKASAFITHAGMGSTMEALSNAVPMVAVPQI-AEQTMNAERIVE 362 (424)
T ss_dssp TTCSEEEECCCHHHHHHHHHTTCCEEECCCS-HHHHHHHHHHHH
T ss_pred hhCCEEEECCchhHHHHHHHcCCCEEEecCc-cchHHHHHHHHH
Confidence 999999999997665 999999999986443 333344665553
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-14 Score=140.48 Aligned_cols=274 Identities=9% Similarity=0.021 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEEecChh-hH--hccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHHHHhcCCCEE
Q 016179 44 DSIGSRLMSAMKKLAPLPVSFSGVGGSM-MS--EQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV 120 (394)
Q Consensus 44 h~~a~~l~~~L~~~~~~~~~~~g~gg~~-m~--~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~~~PD~V 120 (394)
..+...++++|.+++.+ +.++....+. .. ..++. ...+....+. .+......+....++.+++++.+||+|
T Consensus 30 ~~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~i~----~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~Dvv 103 (394)
T 2jjm_A 30 GVVGTELGKQLAERGHE-IHFITSGLPFRLNKVYPNIY----FHEVTVNQYS-VFQYPPYDLALASKMAEVAQRENLDIL 103 (394)
T ss_dssp HHHHHHHHHHHHHTTCE-EEEECSSCC----CCCTTEE----EECCCCC-----CCSCCHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCCCE-EEEEeCCCCCcccccCCceE----EEeccccccc-ccccccccHHHHHHHHHHHHHcCCCEE
Confidence 55588899999987664 7666543321 11 11111 1111111110 011111122345567788889999999
Q ss_pred EEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcccc----ccCcchH-HHHHHHhhhheeecCcccHHHHHhc-CC
Q 016179 121 VTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWA----WKGGEAR-LKNLAAFVDHILCILPNEEAICRLN-GL 194 (394)
Q Consensus 121 i~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa----~~~g~~r-~~~l~~~~d~v~~~~p~~~~~~~~~-g~ 194 (394)
++.+. ++..++..+.++... .++|++++. +..+. ..+...+ .+.+.+.+|.+++.++..++.+.+. +.
T Consensus 104 ~~~~~--~~~~~~~~~~~~~~~--~~~p~v~~~--h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~ 177 (394)
T 2jjm_A 104 HVHYA--IPHAICAYLAKQMIG--ERIKIVTTL--HGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVKP 177 (394)
T ss_dssp EECSS--TTHHHHHHHHHHHTT--TCSEEEEEC--CHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCC
T ss_pred EEcch--hHHHHHHHHHHHhhc--CCCCEEEEE--ecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCC
Confidence 98642 222222222211100 147864432 32211 0010012 2345778999999999998887664 33
Q ss_pred --CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhC
Q 016179 195 --AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272 (394)
Q Consensus 195 --~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~ 272 (394)
++.++.|++..... . +.++.+.+++++++++.++|+.+|.-.. .+.+..++++++.+.++
T Consensus 178 ~~~~~vi~ngv~~~~~--~------------~~~~~~~~~~~~~~~~~~~i~~~G~~~~---~Kg~~~li~a~~~l~~~- 239 (394)
T 2jjm_A 178 NKDIQTVYNFIDERVY--F------------KRDMTQLKKEYGISESEKILIHISNFRK---VKRVQDVVQAFAKIVTE- 239 (394)
T ss_dssp SSCEEECCCCCCTTTC--C------------CCCCHHHHHHTTCC---CEEEEECCCCG---GGTHHHHHHHHHHHHHS-
T ss_pred cccEEEecCCccHHhc--C------------CcchHHHHHHcCCCCCCeEEEEeecccc---ccCHHHHHHHHHHHHhh-
Confidence 57888888754432 1 1245678889999888888888765433 23467788999998765
Q ss_pred CCeEEEEEeCCCcChHHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEE
Q 016179 273 PELITVIHVAPNRHVENYITGLIQKWPV--PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAY 345 (394)
Q Consensus 273 ~~~~~vi~~g~~~~~~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y 345 (394)
+++++++++.+. . .+.+++..++.+. ++.+.. + .+++.++|+.||++|..| |.+.+||+++|+|+|. .
T Consensus 240 ~~~~l~i~G~g~-~-~~~l~~~~~~~~l~~~v~~~g-~-~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~-~ 314 (394)
T 2jjm_A 240 VDAKLLLVGDGP-E-FCTILQLVKNLHIEDRVLFLG-K-QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIG-T 314 (394)
T ss_dssp SCCEEEEECCCT-T-HHHHHHHHHTTTCGGGBCCCB-S-CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEE-E
T ss_pred CCCEEEEECCch-H-HHHHHHHHHHcCCCCeEEEeC-c-hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEE-e
Confidence 568888887543 2 3446666665543 465553 3 578999999999999887 5666799999999886 4
Q ss_pred cCChHHH
Q 016179 346 RAHFLTE 352 (394)
Q Consensus 346 ~~~~~~~ 352 (394)
+.+....
T Consensus 315 ~~~~~~e 321 (394)
T 2jjm_A 315 RVGGIPE 321 (394)
T ss_dssp CCTTSTT
T ss_pred cCCChHH
Confidence 5554433
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.5e-15 Score=147.61 Aligned_cols=178 Identities=13% Similarity=0.022 Sum_probs=115.9
Q ss_pred HHHHHhhhheeecCcccHHHHHh--cC-------------CCeEEEcCCCchhhhhhcCCCCCC-------CcccccCCC
Q 016179 169 KNLAAFVDHILCILPNEEAICRL--NG-------------LAATFVGHPVVEDCLELNLGKGPE-------PCELKMEGN 226 (394)
Q Consensus 169 ~~l~~~~d~v~~~~p~~~~~~~~--~g-------------~~~~~vG~Pv~~~~~~~~~~~~~~-------~~~~~~~~~ 226 (394)
+.+.+.+|.+++.++..++.+.+ +| .++.++.|++..... .+..+.. +.......+
T Consensus 199 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T 2qzs_A 199 KAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIW--SPETDLLLASRYTRDTLEDKAEN 276 (485)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTS--CTTTCTTSSSCCCTTCGGGGHHH
T ss_pred HHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCcccc--CccccccccccccccchhHHHHh
Confidence 44577899999999998887754 23 457777777643321 1100000 000000002
Q ss_pred hHHHHhhcCCCC--CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVPS--GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~~--~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|+++ +.++|+.+| |-.. .+.+..++++++.+.+ +++++++++.+...+.+.+++...+.+.++.+
T Consensus 277 ~~~~r~~~~~~~~~~~~~i~~vG--rl~~-~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~ 351 (485)
T 2qzs_A 277 KRQLQIAMGLKVDDKVPLFAVVS--RLTS-QKGLDLVLEALPGLLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGV 351 (485)
T ss_dssp HHHHHHHHTCCCCTTSCEEEEEE--EESG-GGCHHHHHHHHHHHHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHcCCCCCCCCeEEEEec--cCcc-ccCHHHHHHHHHHHhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEE
Confidence 467888999986 667777764 2222 3346788999998865 47999888875433455666666665556765
Q ss_pred ecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 305 VPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.|+..+++.++|++||++|..| |.+.+|||++|+|+|. .+.+.+...+
T Consensus 352 ~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~-s~~gg~~e~v 405 (485)
T 2qzs_A 352 QIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLV-RRTGGLADTV 405 (485)
T ss_dssp EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEE-ESSHHHHHHC
T ss_pred eCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEE-CCCCCcccee
Confidence 55663344589999999999998 6677799999999886 5666555443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-14 Score=142.33 Aligned_cols=271 Identities=14% Similarity=0.091 Sum_probs=133.7
Q ss_pred CCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-cccC-cce----------e----cc
Q 016179 30 GELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPME-DIA----------V----MG 90 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~~-~l~----------~----~G 90 (394)
.+|||+|++.++.||++ ...|+++|++++++ +.++..+. +.++..|++.. ++.. .+. . ..
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~Ghe-V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHE-VLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPRE 92 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE-EEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCE-EEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccccc
Confidence 56899999999999999 88899999998875 77765432 23456666532 1100 000 0 00
Q ss_pred HHHhhhhHHH-----HHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcc
Q 016179 91 IWELLPHIYK-----FRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGE 165 (394)
Q Consensus 91 ~~~~l~~~~~-----~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~ 165 (394)
..+.+..... ....+.++.+++++++||+|++ |...+...++++. . ++|++.++.....|.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~-d~~~~~~~~~a~~--~------giP~v~~~~~~~~~~~~~~- 162 (398)
T 4fzr_A 93 EKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLT-ETYSLTGPLVAAT--L------GIPWIEQSIRLASPELIKS- 162 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEE-ETTCTHHHHHHHH--H------TCCEEEECCSSCCCHHHHH-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE-CccccHHHHHHHh--h------CCCEEEeccCCCCchhhhH-
Confidence 0111111111 1234557888899999999985 3334555555443 2 7896443322221110000
Q ss_pred hHHHHHHHhhhh-----------eeecCcccHHHHHhcC-CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhh
Q 016179 166 ARLKNLAAFVDH-----------ILCILPNEEAICRLNG-LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNK 233 (394)
Q Consensus 166 ~r~~~l~~~~d~-----------v~~~~p~~~~~~~~~g-~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 233 (394)
.....+.+..+. .+..+|.........+ .+..+++... ...+..+.
T Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 220 (398)
T 4fzr_A 163 AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNG----------------------RNDQVPSW 220 (398)
T ss_dssp HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCCC----------------------SSCCCCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCC----------------------CCCCCchh
Confidence 000112222222 2222222111110000 0011111100 00001111
Q ss_pred cCCCCCCcEEEEECCCcHHH--------HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEe
Q 016179 234 YSVPSGATVISLLPGSRLQE--------VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILV 305 (394)
Q Consensus 234 lgl~~~~~~IlllgGSrg~e--------i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~ 305 (394)
+..+++.++|+++.|+...+ ..+.+..++++ +.+. +.+++++++++. .+.++ +...++++.
T Consensus 221 ~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a---l~~~--~~~~v~~~~~~~--~~~l~----~~~~~v~~~ 289 (398)
T 4fzr_A 221 VFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE---LPKL--GFEVVVAVSDKL--AQTLQ----PLPEGVLAA 289 (398)
T ss_dssp HHSCCSSCEEECC----------------CCSHHHHHHH---GGGG--TCEEEECCCC--------------CCTTEEEE
T ss_pred hhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH---HHhC--CCEEEEEeCCcc--hhhhc----cCCCcEEEe
Confidence 11235678899988888642 12233444444 4332 588888887642 22222 233468777
Q ss_pred cCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCC
Q 016179 306 PGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAH 348 (394)
Q Consensus 306 ~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~ 348 (394)
. +. ++.++|+.||++|+.+|..|+ ||+++|+|+|++ +..
T Consensus 290 ~-~~--~~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~-p~~ 329 (398)
T 4fzr_A 290 G-QF--PLSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSV-PVI 329 (398)
T ss_dssp S-CC--CHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEEC-CCS
T ss_pred C-cC--CHHHHHhhCCEEEecCCHHHHHHHHHhCCCEEec-CCc
Confidence 4 42 689999999999999997665 999999999975 443
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-15 Score=147.57 Aligned_cols=178 Identities=11% Similarity=0.001 Sum_probs=114.8
Q ss_pred HHHHHhhhheeecCcccHHHHHh--cC-----------CCeEEEcCCCchhhhhhcCCCCC-CCcc-----c-ccCCChH
Q 016179 169 KNLAAFVDHILCILPNEEAICRL--NG-----------LAATFVGHPVVEDCLELNLGKGP-EPCE-----L-KMEGNSE 228 (394)
Q Consensus 169 ~~l~~~~d~v~~~~p~~~~~~~~--~g-----------~~~~~vG~Pv~~~~~~~~~~~~~-~~~~-----~-~~~~~~~ 228 (394)
+.+.+.+|.+++.++..++.+.+ +| .++.++.|++..... .+..+. ...+ + ....++.
T Consensus 201 ~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 201 KGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVW--NPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp HHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTS--CTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred HHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCccccc--CCcccccccccccccchhhHHHhHH
Confidence 44577899999999998887754 23 246777777643321 110000 0000 0 0000246
Q ss_pred HHHhhcCCCCC-CcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecC
Q 016179 229 DFKNKYSVPSG-ATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPG 307 (394)
Q Consensus 229 ~~r~~lgl~~~-~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g 307 (394)
.+++++|++++ .++|+.+ |... . .+.+..++++++.+.+ +++++++++.+...+++.+++...+.+.++.++.|
T Consensus 279 ~~r~~~~~~~~~~~~i~~v-Grl~-~-~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g 353 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVI-SRLT-W-QKGIDLMAEAVDEIVS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIG 353 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEE-SCBS-T-TTTHHHHHTTHHHHHH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEES
T ss_pred HHHHhcCCCCCCCeEEEEE-ccCc-c-ccCHHHHHHHHHHHHh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecC
Confidence 78889999876 5655555 4443 2 3346788899998865 48999988876433455666666665556875556
Q ss_pred CCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 308 GSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 308 ~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+..+++.++|++||++|..| |.+.+|||++|+|+|. .+.+.+...+
T Consensus 354 ~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~-s~~gg~~e~v 404 (485)
T 1rzu_A 354 YNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVV-ARTGGLADTV 404 (485)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEE-ESSHHHHHHC
T ss_pred CCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEE-eCCCChhhee
Confidence 63334589999999999988 6677799999999886 5666555444
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-15 Score=147.75 Aligned_cols=297 Identities=10% Similarity=-0.009 Sum_probs=165.7
Q ss_pred cccCCCceEEEEeCC--chHHHH-HHHHHHHHHhcCCCCeEEEEecCh-hhHh--ccCccccc-cCcceeccHHHhhhhH
Q 016179 26 AIKDGELRVFIVAGE--VSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS-MMSE--QGMKSLFP-MEDIAVMGIWELLPHI 98 (394)
Q Consensus 26 ~~~~~~~kIlI~aG~--~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~-~m~~--~g~~~~~~-~~~l~~~G~~~~l~~~ 98 (394)
...+++|||++++.. .||+-. ...++++|.+++.+ +.++...+. ...+ ..+...+. ...+.+.. ...
T Consensus 35 ~~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--- 108 (416)
T 2x6q_A 35 AEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIE-ARWFVIEGPTEFFNVTKTFHNALQGNESLKLTE--EMK--- 108 (416)
T ss_dssp HHTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCE-EEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCH--HHH---
T ss_pred hhhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCe-EEEEEccCCcchhhhhcccceeecccccccccH--HHH---
Confidence 334467899887665 466555 77899999987664 776665542 2110 00110000 00111111 111
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCc-c-hHHHHHHHhhh
Q 016179 99 YKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGG-E-ARLKNLAAFVD 176 (394)
Q Consensus 99 ~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g-~-~r~~~l~~~~d 176 (394)
..+......+.+.+++.+||+|++.+.... .++..++ + .+|++++. |..+..... . ...+++.+.+|
T Consensus 109 ~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~--~~~~~~~-~------~~p~v~~~--h~~~~~~~~~~~~~~~~~~~~~~ 177 (416)
T 2x6q_A 109 ELYLNVNRENSKFIDLSSFDYVLVHDPQPA--ALIEFYE-K------KSPWLWRC--HIDLSSPNREFWEFLRRFVEKYD 177 (416)
T ss_dssp HHHHHHHHHHHHSSCGGGSSEEEEESSTTG--GGGGGSC-C------CSCEEEEC--CSCCSSCCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEeccchh--hHHHHHH-h------cCCEEEEE--ccccCCccHHHHHHHHHHHHhCC
Confidence 112223344666777889999998764222 2222211 1 36864432 322211100 0 12334455567
Q ss_pred hee-ecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 177 HIL-CILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 177 ~v~-~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
.++ +.++..++.+.+ .++.++.|++........+. .+.++.+.+++++++++.++|+.+|.-.. .
T Consensus 178 ~~i~~~s~~~~~~~~~--~~~~vi~ngvd~~~~~~~~~---------~~~~~~~~r~~~~~~~~~~~i~~vGrl~~--~- 243 (416)
T 2x6q_A 178 RYIFHLPEYVQPELDR--NKAVIMPPSIDPLSEKNVEL---------KQTEILRILERFDVDPEKPIITQVSRFDP--W- 243 (416)
T ss_dssp EEEESSGGGSCTTSCT--TTEEECCCCBCTTSTTTSCC---------CHHHHHHHHHHTTCCTTSCEEEEECCCCT--T-
T ss_pred EEEEechHHHHhhCCc--cceEEeCCCCChhhhccccc---------ChhhHHHHHHHhCCCCCCcEEEEEecccc--c-
Confidence 666 444544443432 35667777664321100000 01124567889999988888888754322 2
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCc---ChHHHHHHHhhcCC--CCEEEecCC---CcchHHHHHHHcccceehh
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNR---HVENYITGLIQKWP--VPSILVPGG---SSNLKYDAFSASRVALCTS 327 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~---~~~~~l~~~~~~~~--~~v~~~~g~---~~~~~~~~~~~ADl~I~~S 327 (394)
+.+..++++++.+.++.|++++++++.+.. +..+.+++..+..+ .+++++... ..+++.++|+.||++|..|
T Consensus 244 Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps 323 (416)
T 2x6q_A 244 KGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS 323 (416)
T ss_dssp SCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECC
T ss_pred cCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECC
Confidence 346778899999988888999999887632 12233444443332 367776321 0237999999999999999
Q ss_pred -----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 328 -----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 328 -----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|.+.+||+++|+|+|. .+.+.....+
T Consensus 324 ~~E~~~~~~lEAma~G~PvI~-~~~~g~~e~i 354 (416)
T 2x6q_A 324 IREGFGLTVTEAMWKGKPVIG-RAVGGIKFQI 354 (416)
T ss_dssp SSCSSCHHHHHHHHTTCCEEE-ESCHHHHHHC
T ss_pred CcCCCccHHHHHHHcCCCEEE-ccCCCChhhe
Confidence 6777799999999876 5665555443
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.8e-14 Score=138.31 Aligned_cols=284 Identities=11% Similarity=-0.008 Sum_probs=161.7
Q ss_pred CCceEEEEeCC----chHH-HHHHHHHHHHHhcCCCCeEEEEecChhhHhccCc-cccccCcceeccHHHhhhhHHHHHH
Q 016179 30 GELRVFIVAGE----VSGD-SIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMK-SLFPMEDIAVMGIWELLPHIYKFRV 103 (394)
Q Consensus 30 ~~~kIlI~aG~----~sGh-~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~-~~~~~~~l~~~G~~~~l~~~~~~~~ 103 (394)
++|||++++.. .||. .+...++++|.+++.+ +.++............. .......++..+. ...+.....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 94 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHE-VSVLAPASPHVKLPDYVVSGGKAVPIPYNGS---VARLRFGPA 94 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCE-EEEEESCCTTSCCCTTEEECCCCC---------------CCHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCe-EEEEecCCccccCCcccccCCcEEeccccCC---cccccccHH
Confidence 56899988753 2554 5588999999987664 77666543221000000 0001111111111 000110112
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcc----hHHHHHHHhhhhee
Q 016179 104 RLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGE----ARLKNLAAFVDHIL 179 (394)
Q Consensus 104 ~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~----~r~~~l~~~~d~v~ 179 (394)
....+.+++++.+||+|++.+...... +..+.+.. ++|+++++ +..+...... ...+++.+.+|.++
T Consensus 95 ~~~~l~~~l~~~~~Dii~~~~~~~~~~--~~~~~~~~-----~~~~i~~~--h~~~~~~~~~~~~~~~~~~~~~~~d~ii 165 (406)
T 2gek_A 95 THRKVKKWIAEGDFDVLHIHEPNAPSL--SMLALQAA-----EGPIVATF--HTSTTKSLTLSVFQGILRPYHEKIIGRI 165 (406)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCCSSSH--HHHHHHHE-----ESSEEEEE--CCCCCSHHHHHHHHSTTHHHHTTCSEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCccchHH--HHHHHHhc-----CCCEEEEE--cCcchhhhhHHHHHHHHHHHHhhCCEEE
Confidence 335677888889999999876433332 22222221 57865443 2221110000 01124567899999
Q ss_pred ecCcccHHHHHh-cCCC-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC-cHHHHHh
Q 016179 180 CILPNEEAICRL-NGLA-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS-RLQEVAR 256 (394)
Q Consensus 180 ~~~p~~~~~~~~-~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS-rg~ei~~ 256 (394)
+.++..++.+.+ .+.+ + ++.|++...... + .. .+.+++++.++|+.+|.- .. .+
T Consensus 166 ~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~--~------------~~-----~~~~~~~~~~~i~~~G~~~~~---~K 222 (406)
T 2gek_A 166 AVSDLARRWQMEALGSDAV-EIPNGVDVASFA--D------------AP-----LLDGYPREGRTVLFLGRYDEP---RK 222 (406)
T ss_dssp ESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHH--T------------CC-----CCTTCSCSSCEEEEESCTTSG---GG
T ss_pred ECCHHHHHHHHHhcCCCcE-EecCCCChhhcC--C------------Cc-----hhhhccCCCeEEEEEeeeCcc---cc
Confidence 999998887754 3443 5 788887554321 1 00 112334456777777543 22 23
Q ss_pred hHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehh------hH
Q 016179 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTS------GT 329 (394)
Q Consensus 257 ~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S------Gt 329 (394)
....+++++..+.++.|++++++++.+.. +.+++...++..++.+. |+. .+++.++|+.||++|..| |.
T Consensus 223 g~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~-g~~~~~~~~~~~~~adv~v~ps~~~e~~~~ 298 (406)
T 2gek_A 223 GMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFL-GQVDDATKASAMRSADVYCAPHLGGESFGI 298 (406)
T ss_dssp CHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEEC-CSCCHHHHHHHHHHSSEEEECCCSCCSSCH
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEE-ecCCHHHHHHHHHHCCEEEecCCCCCCCch
Confidence 46778899999988778999888876532 44555554433357766 442 345799999999999987 56
Q ss_pred HHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 330 VAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 330 ~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
+.+||+++|+|+|. .+.+.....+
T Consensus 299 ~~~Ea~a~G~PvI~-~~~~~~~e~i 322 (406)
T 2gek_A 299 VLVEAMAAGTAVVA-SDLDAFRRVL 322 (406)
T ss_dssp HHHHHHHHTCEEEE-CCCHHHHHHH
T ss_pred HHHHHHHcCCCEEE-ecCCcHHHHh
Confidence 66799999999775 5666666555
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=145.36 Aligned_cols=285 Identities=10% Similarity=0.024 Sum_probs=167.9
Q ss_pred ceEEEEeCC---chH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHH
Q 016179 32 LRVFIVAGE---VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKE 107 (394)
Q Consensus 32 ~kIlI~aG~---~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~ 107 (394)
|||++++.. .|| ..+...++++|.+++.+ +.++......-...+++. ..++..+... .........+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~~~v----~~~~~~~~~~----~~~~~~~~~~ 71 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHH-VRVYTQSWEGDCPKAFEL----IQVPVKSHTN----HGRNAEYYAW 71 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCC-EEEEESEECSCCCTTCEE----EECCCCCSSH----HHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCe-EEEEecCCCCCCCCCcEE----EEEccCcccc----hhhHHHHHHH
Confidence 688887654 355 45588999999998775 877765421111123322 1122211111 1223344556
Q ss_pred HHHHHHhcCCCEEEEeCC-CCchHHHHHHHHHhccccCCCCCeEEEeecCcccccc-CcchH-HHHH----H--Hhhhhe
Q 016179 108 TIEAALLFRPHAVVTVDS-KGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWK-GGEAR-LKNL----A--AFVDHI 178 (394)
Q Consensus 108 ~~~~i~~~~PD~Vi~~~~-~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~-~g~~r-~~~l----~--~~~d~v 178 (394)
+.+++++.+||+|++.+. +++...++.. . ..+|.+.+ .+. |... ....+ ...+ . +.+|.+
T Consensus 72 l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~---~-----~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~i 140 (374)
T 2iw1_A 72 VQNHLKEHPADRVVGFNKMPGLDVYFAAD---V-----CYAEKVAQ--EKG-FLYRLTSRYRHYAAFERATFEQGKSTKL 140 (374)
T ss_dssp HHHHHHHSCCSEEEESSCCTTCSEEECCS---C-----CHHHHHHH--HCC-HHHHTSHHHHHHHHHHHHHHSTTCCCEE
T ss_pred HHHHHhccCCCEEEEecCCCCceeeeccc---c-----ccceeeee--ccc-chhhhcHHHHHHHHHHHHHhhccCCcEE
Confidence 778888999999998753 2222111100 0 01121111 111 1100 00001 1111 1 258999
Q ss_pred eecCcccHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHH
Q 016179 179 LCILPNEEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEV 254 (394)
Q Consensus 179 ~~~~p~~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei 254 (394)
++.++..++.+.+ +|++ +.++.|++......... ....+.++++++|++++.++|+.+|.-..
T Consensus 141 i~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--- 207 (374)
T 2iw1_A 141 MMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQ----------IPNSREIYRQKNGIKEQQNLLLQVGSDFG--- 207 (374)
T ss_dssp EESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGS----------CTTHHHHHHHHTTCCTTCEEEEEECSCTT---
T ss_pred EEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCccc----------chhHHHHHHHHhCCCCCCeEEEEeccchh---
Confidence 9999999888765 4653 67778877544321110 11234578899999988888887754332
Q ss_pred HhhHHHHHHHHHHhhhh-CCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh----
Q 016179 255 ARMLPIFAKTVELLKDS-FPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS---- 327 (394)
Q Consensus 255 ~~~l~~ll~a~~~l~~~-~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S---- 327 (394)
.+....++++++.+.++ .+++++++++.+.. +.+++..++.+ .++++.. + .+++.++|+.||++|..|
T Consensus 208 ~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~~ad~~v~ps~~e~ 282 (374)
T 2iw1_A 208 RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFS-G-RNDVSELMAAADLLLHPAYQEA 282 (374)
T ss_dssp TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEES-C-CSCHHHHHHHCSEEEECCSCCS
T ss_pred hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECC-C-cccHHHHHHhcCEEEeccccCC
Confidence 23467788999888665 46899888887532 33455544433 2577774 4 578999999999999988
Q ss_pred -hHHHHHHHHcCCCEEEEEcCChHHHHHH
Q 016179 328 -GTVAVELQLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 328 -Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a 355 (394)
|.+.+||+++|+|+|. .+.+.....+.
T Consensus 283 ~~~~~~Ea~a~G~Pvi~-~~~~~~~e~i~ 310 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLT-TAVCGYAHYIA 310 (374)
T ss_dssp SCHHHHHHHHHTCCEEE-ETTSTTTHHHH
T ss_pred cccHHHHHHHCCCCEEE-ecCCCchhhhc
Confidence 6677799999999886 56666555553
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-14 Score=140.70 Aligned_cols=271 Identities=12% Similarity=0.066 Sum_probs=140.4
Q ss_pred cCCCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC-hhhHhccCccc-cccC-cce----------------
Q 016179 28 KDGELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG-SMMSEQGMKSL-FPME-DIA---------------- 87 (394)
Q Consensus 28 ~~~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg-~~m~~~g~~~~-~~~~-~l~---------------- 87 (394)
....|||+|++.++.||++ ...|+++|++++.+ +.++.... +.++..|++.. ++.. ++.
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~Ghe-V~v~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHD-VLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCE-EEEEESSCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCE-EEEeccchHHHHHhCCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 3356899999999999999 88999999998774 77665411 23456666532 1100 000
Q ss_pred -----eccHHHhhhhHHH-HHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccc
Q 016179 88 -----VMGIWELLPHIYK-FRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAW 161 (394)
Q Consensus 88 -----~~G~~~~l~~~~~-~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~ 161 (394)
..........+.. ....+.++.+++++++||+|++ |...+...++++. . ++|++.++.....+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~-d~~~~~~~~aA~~--~------giP~v~~~~~~~~~~~ 166 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVY-EQGATVGLLAADR--A------GVPAVQRNQSAWRTRG 166 (398)
T ss_dssp GGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEE-ETTCHHHHHHHHH--H------TCCEEEECCTTCCCTT
T ss_pred ccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE-CchhhHHHHHHHH--c------CCCEEEEeccCCCccc
Confidence 0000000000111 1123567888899999999986 4333444444332 2 7997544322211100
Q ss_pred cCcchHH-HHHHHhhhh----------eeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHH
Q 016179 162 KGGEARL-KNLAAFVDH----------ILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDF 230 (394)
Q Consensus 162 ~~g~~r~-~~l~~~~d~----------v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (394)
.. ... ..+.+..+. ++..+|........ ..+.|++ +..+ ......
T Consensus 167 ~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~--------------~~~~~~ 222 (398)
T 3oti_A 167 MH--RSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAE------PEGWFMR--WVPY--------------GGGAVL 222 (398)
T ss_dssp HH--HHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSC------CCSBCCC--CCCC--------------CCCEEC
T ss_pred hh--hHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCC------CCCCCcc--ccCC--------------CCCcCC
Confidence 00 000 001111111 22222211111000 0011110 0000 000011
Q ss_pred HhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCc
Q 016179 231 KNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSS 310 (394)
Q Consensus 231 r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~ 310 (394)
...+..+++.++|+++.||.....+. ...+.++++.+.+. +.+++++++++. . +.+ .....++.+. ++ .
T Consensus 223 ~~~~~~~~~~~~v~v~~G~~~~~~~~-~~~~~~~~~~l~~~--~~~~v~~~g~~~-~-~~l----~~~~~~v~~~-~~-~ 291 (398)
T 3oti_A 223 GDRLPPVPARPEVAITMGTIELQAFG-IGAVEPIIAAAGEV--DADFVLALGDLD-I-SPL----GTLPRNVRAV-GW-T 291 (398)
T ss_dssp CSSCCCCCSSCEEEECCTTTHHHHHC-GGGHHHHHHHHHTS--SSEEEEECTTSC-C-GGG----CSCCTTEEEE-SS-C
T ss_pred chhhhcCCCCCEEEEEcCCCccccCc-HHHHHHHHHHHHcC--CCEEEEEECCcC-h-hhh----ccCCCcEEEE-cc-C
Confidence 11122345678999999998754211 12233444444432 689999988743 1 112 2333468777 44 2
Q ss_pred chHHHHHHHcccceehhhHHHH-HHHHcCCCEEEE
Q 016179 311 NLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVA 344 (394)
Q Consensus 311 ~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~ 344 (394)
++.++|+.||++|+.+|..|+ ||+++|+|+|++
T Consensus 292 -~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 292 -PLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -CHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred -CHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEc
Confidence 799999999999999998776 999999999985
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=6.1e-14 Score=142.39 Aligned_cols=298 Identities=14% Similarity=0.002 Sum_probs=170.5
Q ss_pred CCceEEEEeC---------------CchHH-HHHHHHHHHHHhcCCCCeEEEEecCh-----h----hH----hccCccc
Q 016179 30 GELRVFIVAG---------------EVSGD-SIGSRLMSAMKKLAPLPVSFSGVGGS-----M----MS----EQGMKSL 80 (394)
Q Consensus 30 ~~~kIlI~aG---------------~~sGh-~~a~~l~~~L~~~~~~~~~~~g~gg~-----~----m~----~~g~~~~ 80 (394)
++|||++++. +.||. .+...++++|.+++.+ +.++..... . .+ ..|++..
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 84 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQ-VDIITRRIKDENWPEFSGEIDYYQETNKVRIV 84 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCE-EEEEEECCCBTTBGGGCCSEEECTTCSSEEEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCe-EEEEeCCCCcccccchhhhHHhccCCCCeEEE
Confidence 4589998875 34664 4488999999988764 777655421 1 11 1233321
Q ss_pred -cccCcceeccHHHhhhhHHHHHHHHHHHHHHHHh--cCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc
Q 016179 81 -FPMEDIAVMGIWELLPHIYKFRVRLKETIEAALL--FRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS 157 (394)
Q Consensus 81 -~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~i~~--~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~ 157 (394)
++...............+. ....++.+++++ .+||+|++.++ .+..++..+++.. ++|++++. |.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~Divh~~~~--~~~~~~~~~~~~~-----~~p~v~~~--H~ 152 (499)
T 2r60_A 85 RIPFGGDKFLPKEELWPYLH---EYVNKIINFYREEGKFPQVVTTHYG--DGGLAGVLLKNIK-----GLPFTFTG--HS 152 (499)
T ss_dssp EECCSCSSCCCGGGCGGGHH---HHHHHHHHHHHHHTCCCSEEEEEHH--HHHHHHHHHHHHH-----CCCEEEEC--SS
T ss_pred EecCCCcCCcCHHHHHHHHH---HHHHHHHHHHHhcCCCCCEEEEcCC--cchHHHHHHHHhc-----CCcEEEEc--cC
Confidence 1111000000011111121 123345667777 58999998642 2222333333221 68965443 33
Q ss_pred cccccC--------------------cchHH-HHHHHhhhheeecCcccHHHHHhc---C-C-------CeEEEcCCCch
Q 016179 158 FWAWKG--------------------GEARL-KNLAAFVDHILCILPNEEAICRLN---G-L-------AATFVGHPVVE 205 (394)
Q Consensus 158 ~wa~~~--------------------g~~r~-~~l~~~~d~v~~~~p~~~~~~~~~---g-~-------~~~~vG~Pv~~ 205 (394)
.|.+.. ..... +.+.+.+|.+++.++..++.+.+. | + ++.++.|++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~ 232 (499)
T 2r60_A 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNT 232 (499)
T ss_dssp CHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCT
T ss_pred cccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcCh
Confidence 321100 00011 234678999999999998887553 6 4 46777777754
Q ss_pred hhhhhcCCCCCCCcccccCCChHHHHhhcC-----CCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC-eEEEE
Q 016179 206 DCLELNLGKGPEPCELKMEGNSEDFKNKYS-----VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE-LITVI 279 (394)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg-----l~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~-~~~vi 279 (394)
... .+.. ....+.++|+++| ++++.++|+.+| ... . .+.+..++++++.+.++.++ .++++
T Consensus 233 ~~~--~~~~--------~~~~~~~~r~~~~~~~~~~~~~~~~i~~vG-rl~-~-~Kg~~~li~a~~~l~~~~~~~~~l~i 299 (499)
T 2r60_A 233 RVF--DGEY--------GDKIKAKITKYLERDLGSERMELPAIIASS-RLD-Q-KKNHYGLVEAYVQNKELQDKANLVLT 299 (499)
T ss_dssp TTS--SSCC--------CHHHHHHHHHHHHHHSCGGGTTSCEEEECS-CCC-G-GGCHHHHHHHHHTCHHHHHHCEEEEE
T ss_pred hhc--Cccc--------hhhhHHHHHHHhcccccccCCCCcEEEEee-cCc-c-ccCHHHHHHHHHHHHHhCCCceEEEE
Confidence 322 1100 0001366788888 877888777664 332 2 33467888999888765444 46666
Q ss_pred EeCCCcC------h-------HHHHHHHhhcCCC--CEEEecCCCcchHHHHHHHc----ccceehh-----hHHHHHHH
Q 016179 280 HVAPNRH------V-------ENYITGLIQKWPV--PSILVPGGSSNLKYDAFSAS----RVALCTS-----GTVAVELQ 335 (394)
Q Consensus 280 ~~g~~~~------~-------~~~l~~~~~~~~~--~v~~~~g~~~~~~~~~~~~A----Dl~I~~S-----Gt~tlEa~ 335 (394)
+++.... + .+.+++...+.++ ++.++.....+++.++|+.| |++|..| |.+.+||+
T Consensus 300 ~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAm 379 (499)
T 2r60_A 300 LRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAM 379 (499)
T ss_dssp ESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHH
T ss_pred ECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHH
Confidence 6551111 0 3456666665543 57776431137899999999 9999988 66777999
Q ss_pred HcCCCEEEEEcCChHHHHH
Q 016179 336 LARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 336 a~G~P~Iv~y~~~~~~~~~ 354 (394)
++|+|+|. .+.+.....+
T Consensus 380 a~G~PvI~-s~~~g~~e~v 397 (499)
T 2r60_A 380 ASGLPAVV-TRNGGPAEIL 397 (499)
T ss_dssp HTTCCEEE-ESSBHHHHHT
T ss_pred HcCCCEEE-ecCCCHHHHh
Confidence 99999886 5676666555
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=143.42 Aligned_cols=279 Identities=12% Similarity=0.081 Sum_probs=165.5
Q ss_pred ceEEEEeCC---chH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCccee--ccHHHhhhhHHHHHHHH
Q 016179 32 LRVFIVAGE---VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAV--MGIWELLPHIYKFRVRL 105 (394)
Q Consensus 32 ~kIlI~aG~---~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~--~G~~~~l~~~~~~~~~~ 105 (394)
|||+|++.. .|| ..+...++++|.++ .+ ++++..... |-... ..... ......++.+....-..
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~-V~v~~~~~~-----g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 70 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HE-VIVFGIHAF-----GRSVH---ANIEEFDAQTAEHVRGLNEQGFYY 70 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SE-EEEEEESCC-----SCCSC---SSSEEEEHHHHHHHTTCCSTTCCH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CC-eEEEeecCC-----Ccccc---cccccCCccccccccccccccchH
Confidence 788777542 355 44578899999988 75 888766432 11110 01110 00001111000000012
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCe---EEEeecCccccccCcchHHHHHHHhhh--heee
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA---HFHYVAPSFWAWKGGEARLKNLAAFVD--HILC 180 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~---~~~yv~~~~wa~~~g~~r~~~l~~~~d--~v~~ 180 (394)
.++.+.+++.+||+|++... ...++..+.... ++|. ++.+.......++ ...+++.+.+| .+++
T Consensus 71 ~~l~~~l~~~~~Div~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ii~ 139 (413)
T 3oy2_A 71 SGLSEFIDVHKPDIVMIYND---PIVIGNYLLAMG-----KCSHRTKIVLYVDLVSKNIR---ENLWWIFSHPKVVGVMA 139 (413)
T ss_dssp HHHHHHHHHHCCSEEEEEEC---HHHHHHHHHHGG-----GCCSCCEEEEEECCCSBSCC---GGGGGGGGCTTEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcch---HHHHHHHHHHhc-----cCCCCCceeeeccccchhhH---HHHHHHHhccCCceEEE
Confidence 24566778899999998732 222233332221 2331 2233222211111 12344566777 9999
Q ss_pred cCcccHHHHHhcCC--CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCC--CCcEEEEECCCcHHHHHh
Q 016179 181 ILPNEEAICRLNGL--AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPS--GATVISLLPGSRLQEVAR 256 (394)
Q Consensus 181 ~~p~~~~~~~~~g~--~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~--~~~~IlllgGSrg~ei~~ 256 (394)
.++..++.+.+.|. ++.++.|++..... ...++++++++ +.++|+.+| ... + .+
T Consensus 140 ~S~~~~~~~~~~~~~~~~~vi~ngvd~~~~-------------------~~~~~~~~~~~~~~~~~il~vG-r~~-~-~K 197 (413)
T 3oy2_A 140 MSKCWISDICNYGCKVPINIVSHFVDTKTI-------------------YDARKLVGLSEYNDDVLFLNMN-RNT-A-RK 197 (413)
T ss_dssp SSTHHHHHHHHTTCCSCEEECCCCCCCCCC-------------------TTHHHHTTCGGGTTSEEEECCS-CSS-G-GG
T ss_pred cCHHHHHHHHHcCCCCceEEeCCCCCHHHH-------------------HHHHHhcCCCcccCceEEEEcC-CCc-h-hc
Confidence 99999999988875 47777787643211 34667888887 677666654 322 2 23
Q ss_pred hHHHHHHHHHHhhhhCCCeEEEEEeCCCcC----hHHHHHHHhhcCCCC--------EEEecCCC-cchHHHHHHHcccc
Q 016179 257 MLPIFAKTVELLKDSFPELITVIHVAPNRH----VENYITGLIQKWPVP--------SILVPGGS-SNLKYDAFSASRVA 323 (394)
Q Consensus 257 ~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~----~~~~l~~~~~~~~~~--------v~~~~g~~-~~~~~~~~~~ADl~ 323 (394)
.+..++++++.+.++.|++++++++.+... +++.+++...+.+.. +.++.|+. .+++.++|+.||++
T Consensus 198 g~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~ 277 (413)
T 3oy2_A 198 RLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVI 277 (413)
T ss_dssp THHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEE
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEE
Confidence 467899999999888899999988876432 224555555544433 34445653 35899999999999
Q ss_pred eehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 324 LCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 324 I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
|..| |.+.+||+++|+|+|. .+.+.....+
T Consensus 278 v~pS~~E~~~~~~lEAma~G~PvI~-s~~~g~~e~v 312 (413)
T 3oy2_A 278 VNCSSGEGFGLCSAEGAVLGKPLII-SAVGGADDYF 312 (413)
T ss_dssp EECCSCCSSCHHHHHHHTTTCCEEE-ECCHHHHHHS
T ss_pred EeCCCcCCCCcHHHHHHHcCCCEEE-cCCCChHHHH
Confidence 9988 5566799999999886 5666655544
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.2e-14 Score=139.68 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=70.4
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHH
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAF 317 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 317 (394)
+++++|++..||.+. .++.+..++++++.+ +.++++.+|.+. .+. . +...++.++. + -+..++|
T Consensus 219 ~~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~-----~~~vv~~~g~~~-~~~-~-----~~~~~v~~~~-~--~~~~~ll 282 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPA-PAEAARVAIEAVRAQ-----GRRVVLSSGWAG-LGR-I-----DEGDDCLVVG-E--VNHQVLF 282 (404)
T ss_dssp TSSCCEEECCTTSCC-CTTHHHHHHHHHHHT-----TCCEEEECTTTT-CCC-S-----SCCTTEEEES-S--CCHHHHG
T ss_pred cCCCeEEEECCCCCC-cHHHHHHHHHHHHhC-----CCEEEEEeCCcc-ccc-c-----cCCCCEEEec-C--CCHHHHH
Confidence 566889999999874 233445566665543 578888887532 111 1 1233677774 3 2568999
Q ss_pred HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 318 SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 318 ~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
..||++|+.+|+.|+ |++++|+|+|++ +...--+..++++.
T Consensus 283 ~~~d~~v~~gG~~t~~Eal~~GvP~v~~-p~~~dQ~~na~~~~ 324 (404)
T 3h4t_A 283 GRVAAVVHHGGAGTTTAVTRAGAPQVVV-PQKADQPYYAGRVA 324 (404)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHH
T ss_pred hhCcEEEECCcHHHHHHHHHcCCCEEEc-CCcccHHHHHHHHH
Confidence 999999999998776 999999999986 44433333455554
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-14 Score=138.76 Aligned_cols=277 Identities=13% Similarity=0.067 Sum_probs=143.9
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccc-cccCcc-e------------e-c--cH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSL-FPMEDI-A------------V-M--GI 91 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~-~~~~~l-~------------~-~--G~ 91 (394)
|||++++++++||++ +.+|+++|++++.+ +.+++... +.++..|++.. ++.... . . . +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~-V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQ-VVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCE-EEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCE-EEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 689999999999999 88999999988664 66665432 12345565432 111000 0 0 0 00
Q ss_pred HHhh-hh-HH-HHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcc----ccccCc
Q 016179 92 WELL-PH-IY-KFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSF----WAWKGG 164 (394)
Q Consensus 92 ~~~l-~~-~~-~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~----wa~~~g 164 (394)
...+ +. +. .....+.++.+++++++||+||+..+ .+...++++. . ++|++.++..+.. +.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~-~~~~~~~a~~--~------giP~v~~~~~~~~~~~~~~~~~- 149 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTM-SYVAPLLALH--L------GVPHARQTWDAVDADGIHPGAD- 149 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETT-CTHHHHHHHH--H------TCCEEEECCSSCCCTTTHHHHH-
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcc-hhhHHHHHHh--c------CCCEEEeccCCcccchhhHHHH-
Confidence 1111 11 11 11234567788889999999997543 3444333332 2 7897554422210 00000
Q ss_pred chHHHHH-HHh-------hhheeecCcccHHHHHhcC-CCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcC
Q 016179 165 EARLKNL-AAF-------VDHILCILPNEEAICRLNG-LAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYS 235 (394)
Q Consensus 165 ~~r~~~l-~~~-------~d~v~~~~p~~~~~~~~~g-~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg 235 (394)
.+.+++ .++ +|.+++.++...+...... .++.+++.. . +....++..
T Consensus 150 -~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~l~--- 205 (384)
T 2p6p_A 150 -AELRPELSELGLERLPAPDLFIDICPPSLRPANAAPARMMRHVATS--R------------------QCPLEPWMY--- 205 (384)
T ss_dssp -HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTSCCCEECCCCCCC--C------------------CCBCCHHHH---
T ss_pred -HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCCCCCCceEecCCC--C------------------CCCCCchhh---
Confidence 012222 222 3444554443322111000 011122100 0 000111111
Q ss_pred CCCCCcEEEEECCCcHHH--HH---hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCc
Q 016179 236 VPSGATVISLLPGSRLQE--VA---RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSS 310 (394)
Q Consensus 236 l~~~~~~IlllgGSrg~e--i~---~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~ 310 (394)
-++++++|++..||.+.. ++ +.+..++++++. .+.++++++++ .+. +.++. ...++.+ ++.
T Consensus 206 ~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~-----~~~~~~~~~g~-~~~-~~l~~----~~~~v~~--~~~- 271 (384)
T 2p6p_A 206 TRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR-----WDVELIVAAPD-TVA-EALRA----EVPQARV--GWT- 271 (384)
T ss_dssp CCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT-----TTCEEEEECCH-HHH-HHHHH----HCTTSEE--ECC-
T ss_pred cCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhc-----CCcEEEEEeCC-CCH-HhhCC----CCCceEE--cCC-
Confidence 124567899999998753 22 345555555543 26888888774 222 22222 1235666 442
Q ss_pred chHHHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 311 NLKYDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 311 ~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
++.++|+.||++|+.+|+.|+ |++++|+|+|++ +...--...++++.
T Consensus 272 -~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~-p~~~dq~~~a~~~~ 319 (384)
T 2p6p_A 272 -PLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLI-PKGSVLEAPARRVA 319 (384)
T ss_dssp -CHHHHGGGCSEEEECSCTTHHHHHHHTTCCEEEC-CCSHHHHHHHHHHH
T ss_pred -CHHHHHhhCCEEEeCCcHHHHHHHHHhCCCEEEc-cCcccchHHHHHHH
Confidence 578999999999999998665 999999999975 44332233344443
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-13 Score=132.13 Aligned_cols=272 Identities=13% Similarity=0.115 Sum_probs=154.7
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
|||+|+.++..||+. +..++++|++.+|+ +++.+++++.+++.. +..-...++-.... +.....++.+.++.+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~-~~i~~l~~~~~~~l~-~~~p~i~~v~~~~~----~~~~~~~~~~~~l~~ 74 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQ-AIIDVMAPAWCRPLL-SRMPEVNEAIPMPL----GHGALEIGERRKLGH 74 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTT-CEEEEEECGGGHHHH-TTCTTEEEEEEC-----------CHHHHHHHHH
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCC-CEEEEEECcchhHHH-hcCCccCEEEEecC----CccccchHHHHHHHH
Confidence 689999999999995 99999999999996 999888887664321 11000111111111 111112234556777
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcccHHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICR 190 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~~~~~~ 190 (394)
.+++.+||++|..+. .+...+..++. ++|..+.|..+..|.+... +. + .+. ...+.+.+.+.
T Consensus 75 ~l~~~~~D~vid~~~-~~~sa~~~~~~--------~~~~~ig~~~~~~~~~~~~--~~----~-~~~--~~~~~~~~~~~ 136 (348)
T 1psw_A 75 SLREKRYDRAYVLPN-SFKSALVPLFA--------GIPHRTGWRGEMRYGLLND--VR----V-LDK--EAWPLMVERYI 136 (348)
T ss_dssp HTTTTTCSEEEECSC-CSGGGHHHHHT--------TCSEEEEECTTTCTTTCTE--EE----C-CCT--TTCCSHHHHHH
T ss_pred HHHhcCCCEEEECCC-ChHHHHHHHHh--------CCCEEeccCCCcccccccc--cc----c-CCC--CCCchHHHHHH
Confidence 888899999985432 23322322321 5675456654432211100 00 0 000 01122233222
Q ss_pred h----cCC-------CeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhh-H
Q 016179 191 L----NGL-------AATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM-L 258 (394)
Q Consensus 191 ~----~g~-------~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~-l 258 (394)
+ .|+ +.. +++|..+.- +.+++++++++|++.+++.|++.|||+..+.++. .
T Consensus 137 ~l~~~~g~~~~~~~~~~~-~~~p~l~~~----------------~~~~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~ 199 (348)
T 1psw_A 137 ALAYDKGIMRTAQDLPQP-LLWPQLQVS----------------EGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPH 199 (348)
T ss_dssp HTTSCGGGCSSGGGSCSS-CCCCCCCCC----------------HHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCH
T ss_pred HHHhhcccccccccCCcc-cCCceeecC----------------HHHHHHHHHHhCCCCCCcEEEEECCCCccccCCCCH
Confidence 2 121 111 344432210 0123456778888777889999999964333332 2
Q ss_pred HHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC----CCEEEecCCC-cchHHHHHHHcccceeh-hhHHHH
Q 016179 259 PIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP----VPSILVPGGS-SNLKYDAFSASRVALCT-SGTVAV 332 (394)
Q Consensus 259 ~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~----~~v~~~~g~~-~~~~~~~~~~ADl~I~~-SGt~tl 332 (394)
..+.++++.|.++ ++++++.+++. + .+..++.....+ .++..+.|.. ..+..++++.||++|+. ||++.+
T Consensus 200 ~~~~~l~~~L~~~--~~~vvl~g~~~-e-~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~Hl 275 (348)
T 1psw_A 200 YHYAELAKQLIDE--GYQVVLFGSAK-D-HEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHV 275 (348)
T ss_dssp HHHHHHHHHHHHT--TCEEEECCCGG-G-HHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHH
T ss_pred HHHHHHHHHHHHC--CCeEEEEeChh-h-HHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHHH
Confidence 3777888888664 78888876653 2 333343333221 1344444422 46788999999999999 888888
Q ss_pred HHHHcCCCEEEEEcCCh
Q 016179 333 ELQLARLPCVVAYRAHF 349 (394)
Q Consensus 333 Ea~a~G~P~Iv~y~~~~ 349 (394)
|+++|+|+|.+|....
T Consensus 276 -Aaa~g~P~v~lfg~t~ 291 (348)
T 1psw_A 276 -AAALNRPLVALYGPSS 291 (348)
T ss_dssp -HHHTTCCEEEEESSSC
T ss_pred -HHHcCCCEEEEECCCC
Confidence 8899999999986543
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-13 Score=127.60 Aligned_cols=250 Identities=13% Similarity=0.043 Sum_probs=143.0
Q ss_pred ceEEEEeCC----chHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCccccccCcceeccHHHhhhhHHHHHHH
Q 016179 32 LRVFIVAGE----VSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVR 104 (394)
Q Consensus 32 ~kIlI~aG~----~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~ 104 (394)
|||+|-+-+ +.||+. ..+||++|+ + +.|+.--. ...+..|++. ..++. + -
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~-v~F~~~~~~~~~~~~~g~~v----~~l~~----~----------d 57 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----D-VSFACLPLEGSLIDEIPYPV----YELSS----E----------S 57 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----S-EEEEECCCTTCCGGGCCSCE----EECSS----S----------C
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----h-CEEEEecCcHhHHHHCCCeE----EEcCc----c----------C
Confidence 677775443 679999 999999987 3 77665321 1222222221 11110 0 1
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCcc
Q 016179 105 LKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPN 184 (394)
Q Consensus 105 ~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~ 184 (394)
..++.+.+++.+||++|. |+..+.......++... +.++ +.+.... ++ ..||.++-..+.
T Consensus 58 ~~~~~~~l~~~~~d~lIv-D~Y~~~~~~~~~lk~~~-----~~~i-~~iDD~~----~~---------~~~Dllin~~~~ 117 (282)
T 3hbm_A 58 IYELINLIKEEKFELLII-DHYGISVDDEKLIKLET-----GVKI-LSFDDEI----KP---------HHCDILLNVNAY 117 (282)
T ss_dssp HHHHHHHHHHHTCSEEEE-ECTTCCHHHHHHHHHHH-----CCEE-EEECSSC----CC---------CCCSEEEECSTT
T ss_pred HHHHHHHHHhCCCCEEEE-ECCCCCHHHHHHHHHhc-----CcEE-EEEecCC----Cc---------ccCCEEEeCCcc
Confidence 124556777789998885 65467777777776531 3454 3332211 11 158888865544
Q ss_pred c-HHHHHhcCCC---eEEEcC---CCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE-CCCcHHHHHh
Q 016179 185 E-EAICRLNGLA---ATFVGH---PVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL-PGSRLQEVAR 256 (394)
Q Consensus 185 ~-~~~~~~~g~~---~~~vG~---Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl-gGSrg~ei~~ 256 (394)
. ...|.. .++ ..+.|. |+|++|.... + + ..++.+.||++ ||+-+..
T Consensus 118 ~~~~~Y~~-~~p~~~~~l~G~~Y~~lR~eF~~~~---------------~-----~--~r~~~~~ILv~~GG~d~~~--- 171 (282)
T 3hbm_A 118 AKASDYEG-LVPFKCEVRCGFSYALIREEFYQEA---------------K-----E--NRKKKYDFFICMGGTDIKN--- 171 (282)
T ss_dssp CCGGGGTT-TCC-CCEEEESGGGCCCCHHHHHHT---------------T-----C--CCCCCEEEEEECCSCCTTC---
T ss_pred cchhhccc-cCCCCCeEeeCCcccccCHHHHHhh---------------h-----h--ccccCCeEEEEECCCchhh---
Confidence 3 233432 122 458898 9999986421 0 0 11234566665 5554322
Q ss_pred hHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHH
Q 016179 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQ 335 (394)
Q Consensus 257 ~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~ 335 (394)
+...++ +.|.+. . ++.+++|++....+.+++...+.+ +++++.+ .++|+++|++||++||++| +|+ |++
T Consensus 172 l~~~vl---~~L~~~-~--~i~vv~G~~~~~~~~l~~~~~~~~-~v~v~~~--~~~m~~~m~~aDlvI~~gG-~T~~E~~ 241 (282)
T 3hbm_A 172 LSLQIA---SELPKT-K--IISIATSSSNPNLKKLQKFAKLHN-NIRLFID--HENIAKLMNESNKLIISAS-SLVNEAL 241 (282)
T ss_dssp HHHHHH---HHSCTT-S--CEEEEECTTCTTHHHHHHHHHTCS-SEEEEES--CSCHHHHHHTEEEEEEESS-HHHHHHH
T ss_pred HHHHHH---HHhhcC-C--CEEEEECCCchHHHHHHHHHhhCC-CEEEEeC--HHHHHHHHHHCCEEEECCc-HHHHHHH
Confidence 222333 334332 2 455666655443445555544433 6877754 5899999999999999877 566 999
Q ss_pred HcCCCEEEEEcCChHHHHHHHhhccC
Q 016179 336 LARLPCVVAYRAHFLTEWFIRYKAKI 361 (394)
Q Consensus 336 a~G~P~Iv~y~~~~~~~~~a~~~vk~ 361 (394)
++|+|+|++.. ..--...|+.+.+.
T Consensus 242 ~~g~P~i~ip~-~~~Q~~nA~~l~~~ 266 (282)
T 3hbm_A 242 LLKANFKAICY-VKNQESTATWLAKK 266 (282)
T ss_dssp HTTCCEEEECC-SGGGHHHHHHHHHT
T ss_pred HcCCCEEEEeC-CCCHHHHHHHHHHC
Confidence 99999998632 22222345655543
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-13 Score=134.34 Aligned_cols=106 Identities=9% Similarity=0.021 Sum_probs=68.9
Q ss_pred CCCcEEEEECCCcHH-HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 238 SGATVISLLPGSRLQ-EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 238 ~~~~~IlllgGSrg~-ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
+++++|++..||.+. ..++.+..++++++.+ +.++++++|.+. .+ . .....++.+.. +. ++.++
T Consensus 235 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~-~~--~----~~~~~~v~~~~-~~--~~~~l 299 (416)
T 1rrv_A 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTE-LV--L----PDDRDDCFAID-EV--NFQAL 299 (416)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTT-CC--C----SCCCTTEEEES-SC--CHHHH
T ss_pred cCCCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcc-cc--c----cCCCCCEEEec-cC--ChHHH
Confidence 445789999999863 2333445555665543 467888887642 11 1 12233677664 32 47889
Q ss_pred HHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 317 FSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 317 ~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
|..||++|+.+|..|+ |++++|+|+|++ +...--...++++.
T Consensus 300 l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~-p~~~dQ~~na~~l~ 342 (416)
T 1rrv_A 300 FRRVAAVIHHGSAGTEHVATRAGVPQLVI-PRNTDQPYFAGRVA 342 (416)
T ss_dssp GGGSSEEEECCCHHHHHHHHHHTCCEEEC-CCSBTHHHHHHHHH
T ss_pred hccCCEEEecCChhHHHHHHHcCCCEEEc-cCCCCcHHHHHHHH
Confidence 9999999999999776 999999999976 33322233355443
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-12 Score=130.54 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=58.5
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHH
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAF 317 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 317 (394)
+++++|++..||.+ ...+.+..++++++.+ +.++++++|.+.. + . .....++.+. ++ .++ .++|
T Consensus 236 ~~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-~--~----~~~~~~v~~~-~~-~~~-~~~l 299 (415)
T 1iir_A 236 AGPPPVYLGFGSLG-APADAVRVAIDAIRAH-----GRRVILSRGWADL-V--L----PDDGADCFAI-GE-VNH-QVLF 299 (415)
T ss_dssp TSSCCEEEECC----CCHHHHHHHHHHHHHT-----TCCEEECTTCTTC-C--C----SSCGGGEEEC-SS-CCH-HHHG
T ss_pred hCCCeEEEeCCCCC-CcHHHHHHHHHHHHHC-----CCeEEEEeCCCcc-c--c----cCCCCCEEEe-Cc-CCh-HHHH
Confidence 44578999999986 1122344555665543 3678888775421 1 1 1122256665 44 344 5789
Q ss_pred HHcccceehhhHHHH-HHHHcCCCEEEE
Q 016179 318 SASRVALCTSGTVAV-ELQLARLPCVVA 344 (394)
Q Consensus 318 ~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~ 344 (394)
.+||++|+.+|..|+ |++++|+|+|++
T Consensus 300 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 300 GRVAAVIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hhCCEEEeCCChhHHHHHHHcCCCEEEC
Confidence 999999999999776 999999999976
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.1e-12 Score=133.04 Aligned_cols=205 Identities=10% Similarity=0.002 Sum_probs=120.9
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHH-HHhhhheeecCcc
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNL-AAFVDHILCILPN 184 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l-~~~~d~v~~~~p~ 184 (394)
.++.+.+++.+||+|+..+.......++... .+ ..|+.+.+...... .+ ...+ ...+|.+++.++.
T Consensus 272 ~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~---~~---~~~~~~~~~d~~i~~s~~ 338 (568)
T 2vsy_A 272 LATAKHIRHHGIDLLFDLRGWGGGGRPEVFA-LR------PAPVQVNWLAYPGT---SG---APWMDYVLGDAFALPPAL 338 (568)
T ss_dssp HHHHHHHHHTTCSEEEECSSCTTCSSCHHHH-TC------CSSEEEEESSSSSC---CC---CTTCCEEEECTTTSCTTT
T ss_pred HHHHHHHHhCCCCEEEECCCCCCcchHHHHh-cC------CCceeEeeecCCcc---cC---CCCceEEEECCCcCCccc
Confidence 3466788899999999765322221122111 12 24543333211110 00 0001 1247888888876
Q ss_pred cHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHH
Q 016179 185 EEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264 (394)
Q Consensus 185 ~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a 264 (394)
.+. ++-++.++.|....... . ....+...|+++|++++..++ .. |... . +..+.++++
T Consensus 339 ~~~----~~~~i~~ipn~~~~~~~--~-----------~~~~~~~~r~~~~~~~~~~v~-~~-g~~~-~--K~~~~li~a 396 (568)
T 2vsy_A 339 EPF----YSEHVLRLQGAFQPSDT--S-----------RVVAEPPSRTQCGLPEQGVVL-CC-FNNS-Y--KLNPQSMAR 396 (568)
T ss_dssp GGG----CSSEEEECSSCSCCCCT--T-----------CCCCCCCCTGGGTCCTTSCEE-EE-CCCG-G--GCCHHHHHH
T ss_pred ccC----CcceeEcCCCcCCCCCC--C-----------CCCCCCCCccccCCCCCCEEE-Ee-CCcc-c--cCCHHHHHH
Confidence 654 22345555552211000 0 001223467789998766443 33 4443 2 456889999
Q ss_pred HHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC---CEEEecCCC-cchHHHHHHHcccceehh----hHHHHHHHH
Q 016179 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV---PSILVPGGS-SNLKYDAFSASRVALCTS----GTVAVELQL 336 (394)
Q Consensus 265 ~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~---~v~~~~g~~-~~~~~~~~~~ADl~I~~S----Gt~tlEa~a 336 (394)
+..+.++.|+++++++++... ..+.+++...+.++ ++.+. |+. .+++.++|+.||++|..| |++++||++
T Consensus 397 ~~~l~~~~~~~~l~i~G~~g~-~~~~l~~~~~~~~l~~~~v~~~-g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma 474 (568)
T 2vsy_A 397 MLAVLREVPDSVLWLLSGPGE-ADARLRAFAHAQGVDAQRLVFM-PKLPHPQYLARYRHADLFLDTHPYNAHTTASDALW 474 (568)
T ss_dssp HHHHHHHCTTCEEEEECCSTT-HHHHHHHHHHHTTCCGGGEEEE-CCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEecCCHH-HHHHHHHHHHHcCCChhHEEee-CCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHh
Confidence 999988889999988883222 34556666665554 47666 542 248999999999999998 888889999
Q ss_pred cCCCEEEEEcC
Q 016179 337 ARLPCVVAYRA 347 (394)
Q Consensus 337 ~G~P~Iv~y~~ 347 (394)
+|+|+|..+..
T Consensus 475 ~G~Pvv~~~g~ 485 (568)
T 2vsy_A 475 TGCPVLTTPGE 485 (568)
T ss_dssp TTCCEEBCCCS
T ss_pred CCCCEEeccCC
Confidence 99998874443
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=6.4e-13 Score=130.55 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=68.6
Q ss_pred cCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchH
Q 016179 234 YSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLK 313 (394)
Q Consensus 234 lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~ 313 (394)
+..++++++|++..||.+.. +.....+.++++.+.+ .+.++++.+++... .. ......++.+.. + -++
T Consensus 231 l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~-~~-----~~~~~~~v~~~~-~--~p~ 298 (400)
T 4amg_A 231 LPPAAGRRRIAVTLGSIDAL-SGGIAKLAPLFSEVAD--VDAEFVLTLGGGDL-AL-----LGELPANVRVVE-W--IPL 298 (400)
T ss_dssp CSCCTTCCEEEECCCSCC---CCSSSTTHHHHHHGGG--SSSEEEEECCTTCC-CC-----CCCCCTTEEEEC-C--CCH
T ss_pred ccccCCCcEEEEeCCccccc-CccHHHHHHHHHHhhc--cCceEEEEecCccc-cc-----cccCCCCEEEEe-e--cCH
Confidence 34456778999999998742 1111123334444543 35777877765321 11 122233676664 3 368
Q ss_pred HHHHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 314 YDAFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 314 ~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.++|..+|++|+.+|..|+ |++++|+|+|++ +...--...++++.
T Consensus 299 ~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~-P~~~dQ~~na~~v~ 344 (400)
T 4amg_A 299 GALLETCDAIIHHGGSGTLLTALAAGVPQCVI-PHGSYQDTNRDVLT 344 (400)
T ss_dssp HHHHTTCSEEEECCCHHHHHHHHHHTCCEEEC-CC---CHHHHHHHH
T ss_pred HHHhhhhhheeccCCccHHHHHHHhCCCEEEe-cCcccHHHHHHHHH
Confidence 8999999999999998777 999999999975 44332233355444
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.4e-12 Score=121.35 Aligned_cols=246 Identities=15% Similarity=0.058 Sum_probs=148.0
Q ss_pred CCceEEEEeCC----------------chH-HHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHH
Q 016179 30 GELRVFIVAGE----------------VSG-DSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92 (394)
Q Consensus 30 ~~~kIlI~aG~----------------~sG-h~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~ 92 (394)
++|||++++.. .|| ..+...++++|.+++.+ +.++..........++... + . ..
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~-v~v~~~~~~~~~~~~~~~~-~---~--~~-- 72 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHE-VFLLGAPGSPAGRPGLTVV-P---A--GE-- 72 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCE-EEEESCTTSCCCSTTEEEC-S---C--CS--
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcceec-c---C--Cc--
Confidence 46899888765 255 55588899999987654 6666543322111111110 1 0 00
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHH
Q 016179 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLA 172 (394)
Q Consensus 93 ~~l~~~~~~~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~ 172 (394)
..++.+++++.+||+|++.+.. ... ++ .+ . .++| ++++ +..|.+..
T Consensus 73 ------------~~~l~~~l~~~~~Dvi~~~~~~-~~~-~~--~~-~-----~~~p-v~~~--h~~~~~~~--------- 118 (342)
T 2iuy_A 73 ------------PEEIERWLRTADVDVVHDHSGG-VIG-PA--GL-P-----PGTA-FISS--HHFTTRPV--------- 118 (342)
T ss_dssp ------------HHHHHHHHHHCCCSEEEECSSS-SSC-ST--TC-C-----TTCE-EEEE--ECSSSBCS---------
T ss_pred ------------HHHHHHHHHhcCCCEEEECCch-hhH-HH--Hh-h-----cCCC-EEEe--cCCCCCcc---------
Confidence 0146677888999999987532 111 11 11 1 1678 6554 33343321
Q ss_pred HhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH
Q 016179 173 AFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ 252 (394)
Q Consensus 173 ~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ 252 (394)
.+|.+++.++..++.+.+ ..++.++.|++..... .+ ..+ .. ++.++|+.+| +..
T Consensus 119 -~~d~ii~~S~~~~~~~~~-~~~~~vi~ngvd~~~~--~~------------~~~-------~~-~~~~~i~~vG-~~~- 172 (342)
T 2iuy_A 119 -NPVGCTYSSRAQRAHCGG-GDDAPVIPIPVDPARY--RS------------AAD-------QV-AKEDFLLFMG-RVS- 172 (342)
T ss_dssp -CCTTEEESCHHHHHHTTC-CTTSCBCCCCBCGGGS--CC------------STT-------CC-CCCSCEEEES-CCC-
T ss_pred -cceEEEEcCHHHHHHHhc-CCceEEEcCCCChhhc--Cc------------ccc-------cC-CCCCEEEEEe-ccc-
Confidence 389999999999998876 5567777777754322 10 000 11 2445677664 332
Q ss_pred HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehhh---
Q 016179 253 EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTSG--- 328 (394)
Q Consensus 253 ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~SG--- 328 (394)
.. +....++++++.+ ++++++++.+. ..+.+++..++.+.++++. |+. .+++.++|+.||++|..|-
T Consensus 173 ~~-Kg~~~li~a~~~~-----~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~-g~~~~~~l~~~~~~adv~v~ps~~~~ 243 (342)
T 2iuy_A 173 PH-KGALEAAAFAHAC-----GRRLVLAGPAW--EPEYFDEITRRYGSTVEPI-GEVGGERRLDLLASAHAVLAMSQAVT 243 (342)
T ss_dssp GG-GTHHHHHHHHHHH-----TCCEEEESCCC--CHHHHHHHHHHHTTTEEEC-CCCCHHHHHHHHHHCSEEEECCCCCC
T ss_pred cc-cCHHHHHHHHHhc-----CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEe-ccCCHHHHHHHHHhCCEEEECCcccc
Confidence 22 3466788888776 57777777653 2344555554444468776 443 3456999999999997653
Q ss_pred ------------HHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 329 ------------TVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 329 ------------t~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.+.+||+++|+|+|. .+.+.....+
T Consensus 244 ~~~~~~~~E~~~~~~~EAma~G~PvI~-s~~~~~~e~~ 280 (342)
T 2iuy_A 244 GPWGGIWCEPGATVVSEAAVSGTPVVG-TGNGCLAEIV 280 (342)
T ss_dssp CTTCSCCCCCCCHHHHHHHHTTCCEEE-CCTTTHHHHG
T ss_pred cccccccccCccHHHHHHHhcCCCEEE-cCCCChHHHh
Confidence 455699999999886 5666665554
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-11 Score=121.00 Aligned_cols=256 Identities=11% Similarity=0.088 Sum_probs=150.8
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEec--ChhhHhccCccccc--cCcceeccHHHhhhhHHHHHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVG--GSMMSEQGMKSLFP--MEDIAVMGIWELLPHIYKFRVRL 105 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~g--g~~m~~~g~~~~~~--~~~l~~~G~~~~l~~~~~~~~~~ 105 (394)
+..+|+|-+.+.|+-..+..|+++|++++ + +.+.... +..+.+.... ... .. ++. + ..
T Consensus 39 ~~~~iwih~~s~G~~~~~~~L~~~L~~~~-~-v~v~~~~~~~~~~~~~~~~-~v~~~~~-~p~----~----------~~ 100 (374)
T 2xci_A 39 CKGALWVHTASIGEFNTFLPILKELKREH-R-ILLTYFSPRAREYLKTKSD-FYDCLHP-LPL----D----------NP 100 (374)
T ss_dssp GTTCEEEECSSHHHHHHHHHHHHHHHHHS-C-EEEEESCGGGHHHHHTTGG-GCSEEEE-CCC----S----------SH
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHHHHhcC-C-EEEEEcCCcHHHHHHHhcc-cccceeE-CCC----C----------CH
Confidence 45679998888777666889999999876 4 6555432 2222111100 000 00 111 0 11
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecCccc
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE 185 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~p~~ 185 (394)
..+.+++++++||+|+++.+..++. ++..++ . |+++.....+ . ....+++.+.+|.+++.++..
T Consensus 101 ~~l~~~l~~~~pDiv~~~~~~~~~~-~~~~~~--------~-p~~~~~~~~~----~--~~~~~~~~~~~d~ii~~S~~~ 164 (374)
T 2xci_A 101 FSVKRFEELSKPKALIVVEREFWPS-LIIFTK--------V-PKILVNAYAK----G--SLIEKILSKKFDLIIMRTQED 164 (374)
T ss_dssp HHHHHHHHHHCCSEEEEESCCCCHH-HHHHCC--------S-CEEEEEECCC----C--CHHHHHHHTTCSEEEESCHHH
T ss_pred HHHHHHHHHhCCCEEEEECccCcHH-HHHHHh--------C-CEEEEEeecC----c--hHHHHHHHHhCCEEEECCHHH
Confidence 2356778899999999875433343 332221 3 7433221111 1 012345567899999999999
Q ss_pred HHHHHhcCCC-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHH
Q 016179 186 EAICRLNGLA-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264 (394)
Q Consensus 186 ~~~~~~~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a 264 (394)
++.+.+.|++ +.++||+..+.. ... ++. +. .++ ++. ||+.. +....++++
T Consensus 165 ~~~l~~~g~~ki~vi~n~~f~~~-----------------~~~---~~~--l~--~~v-i~~-~~~~~---k~~~~ll~A 215 (374)
T 2xci_A 165 VEKFKTFGAKRVFSCGNLKFICQ-----------------KGK---GIK--LK--GEF-IVA-GSIHT---GEVEIILKA 215 (374)
T ss_dssp HHHHHTTTCCSEEECCCGGGCCC-----------------CCS---CCC--CS--SCE-EEE-EEECG---GGHHHHHHH
T ss_pred HHHHHHcCCCeEEEcCCCccCCC-----------------cCh---hhh--hc--CCE-EEE-EeCCC---chHHHHHHH
Confidence 9999888875 778898732210 000 111 11 244 333 34432 235678999
Q ss_pred HHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCC----------EEEecCCCcchHHHHHHHcccceehh-----hH
Q 016179 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVP----------SILVPGGSSNLKYDAFSASRVALCTS-----GT 329 (394)
Q Consensus 265 ~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~----------v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt 329 (394)
++.+.++.|++++++++.+. +..+.+++..++.++. +.+ .++ .+|+.++|+.||+++..| |+
T Consensus 216 ~~~l~~~~p~~~lvivG~g~-~~~~~l~~~~~~~gl~~~~~~~~~~~v~~-~~~-~~dl~~~y~~aDv~vl~ss~~e~gg 292 (374)
T 2xci_A 216 FKEIKKTYSSLKLILVPRHI-ENAKIFEKKARDFGFKTSFFENLEGDVIL-VDR-FGILKELYPVGKIAIVGGTFVNIGG 292 (374)
T ss_dssp HHHHHTTCTTCEEEEEESSG-GGHHHHHHHHHHTTCCEEETTCCCSSEEE-CCS-SSCHHHHGGGEEEEEECSSSSSSCC
T ss_pred HHHHHhhCCCcEEEEECCCH-HHHHHHHHHHHHCCCceEEecCCCCcEEE-ECC-HHHHHHHHHhCCEEEECCcccCCCC
Confidence 99998878899999887653 2223455555554432 333 343 479999999999976643 33
Q ss_pred HH-HHHHHcCCCEEEEEcCChHH
Q 016179 330 VA-VELQLARLPCVVAYRAHFLT 351 (394)
Q Consensus 330 ~t-lEa~a~G~P~Iv~y~~~~~~ 351 (394)
.+ +|||++|+|+|.....+...
T Consensus 293 ~~~lEAmA~G~PVI~~~~~~~~~ 315 (374)
T 2xci_A 293 HNLLEPTCWGIPVIYGPYTHKVN 315 (374)
T ss_dssp CCCHHHHTTTCCEEECSCCTTSH
T ss_pred cCHHHHHHhCCCEEECCCccChH
Confidence 44 59999999988644545433
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.6e-09 Score=103.94 Aligned_cols=270 Identities=14% Similarity=0.122 Sum_probs=150.6
Q ss_pred CCceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHH
Q 016179 30 GELRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKET 108 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~ 108 (394)
..+||+|+..+.-||+. +..+++.|++..|+ .++..++.+..... ++..-...++-........+ -+..+.++
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~-a~I~~l~~~~~~~l-~~~~p~vd~vi~~~~~~~~~----~~~~~~~l 80 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPH-SHITYVIDEKLQQV-MEYNPNIDELIVVDKKGRHN----SISGLNEV 80 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTT-SEEEEEEEGGGGGG-TSSCTTCSEEEEECCSSHHH----HHHHHHHH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCC-CEEEEEECcchhHH-HhcCCCccEEEEeCcccccc----cHHHHHHH
Confidence 46789999999999988 88999999999996 88877776554321 11110011111000000001 12233456
Q ss_pred HHHHHhcCC-CEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecC---cc
Q 016179 109 IEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL---PN 184 (394)
Q Consensus 109 ~~~i~~~~P-D~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~---p~ 184 (394)
.+.+++.++ |++|.... .+...+...+. +.|..+-|..+. +.+ +.+...... ..
T Consensus 81 ~~~Lr~~~y~D~vidl~~-~~rs~~l~~~~--------~a~~riG~~~~~-~~~------------~~~~~~~~~~~~~h 138 (349)
T 3tov_A 81 AREINAKGKTDIVINLHP-NERTSYLAWKI--------HAPITTGMSHFL-FRP------------FMTKYTRLDRKTRH 138 (349)
T ss_dssp HHHHHHHCCCCEEEECCC-SHHHHHHHHHH--------CCSEEEECCCTT-TGG------------GCSEECCCCTTTSC
T ss_pred HHHHhhCCCCeEEEECCC-ChHHHHHHHHh--------CCCeEEecCCCC-ccc------------cccccccCCCCCcc
Confidence 677788899 99997642 23333333332 566545552211 000 111111000 11
Q ss_pred cHH----HHHhcCCCeE-EEcCC--CchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhh
Q 016179 185 EEA----ICRLNGLAAT-FVGHP--VVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM 257 (394)
Q Consensus 185 ~~~----~~~~~g~~~~-~vG~P--v~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~ 257 (394)
+.+ .++..|++.. -.+.+ +.++.. ....++.+++|++++++.|++.|||+.. .++.
T Consensus 139 ~v~r~~~ll~~lg~~~~~~~~~~l~~~~~~~----------------~~~~~~l~~~g~~~~~~~i~i~pga~~~-~k~w 201 (349)
T 3tov_A 139 AADMYINVLEQLGVTDTSNSGLHIEICEEWR----------------CQAQEFYSSHGLTDTDILIGFNIGSAVP-EKRW 201 (349)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCCCCCCCHHHH----------------HHHHHHHHHTTCCTTCCEEEEECCCSSG-GGCC
T ss_pred HHHHHHHHHHHhCCCccCCCceeeeCCHHHH----------------HHHHHHHHHcCCCCCCCEEEEeCCCCCc-cCCC
Confidence 111 1233343210 00000 000000 0012334567888888999999999874 2332
Q ss_pred -HHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceeh-hhHHHHHH
Q 016179 258 -LPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCT-SGTVAVEL 334 (394)
Q Consensus 258 -l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~-SGt~tlEa 334 (394)
.+.+.+.++.|.++ +.++++.+++. + ++..++.....+.++..+.+.. ..++.++++.||++|+. ||++.+ |
T Consensus 202 p~~~~~~l~~~l~~~--g~~vvl~g~~~-e-~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~Hl-A 276 (349)
T 3tov_A 202 PAERFAHVADYFGRL--GYKTVFFGGPM-D-LEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHV-G 276 (349)
T ss_dssp CHHHHHHHHHHHHHH--TCEEEECCCTT-T-HHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHH-H
T ss_pred CHHHHHHHHHHHHhC--CCeEEEEeCcc-h-HHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHH-H
Confidence 44677888888764 67888766653 3 3444554444433333343321 46788999999999998 999999 9
Q ss_pred HHcCCCEEEEEcCCh
Q 016179 335 QLARLPCVVAYRAHF 349 (394)
Q Consensus 335 ~a~G~P~Iv~y~~~~ 349 (394)
+++|+|+|.+|....
T Consensus 277 aa~g~P~v~lfg~t~ 291 (349)
T 3tov_A 277 ISQGVPIVALYGPSN 291 (349)
T ss_dssp HTTTCCEEEECSSCC
T ss_pred HhcCCCEEEEECCCC
Confidence 999999999885543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.3e-09 Score=112.09 Aligned_cols=121 Identities=17% Similarity=0.214 Sum_probs=86.3
Q ss_pred hHHHHhhcCCC--CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVP--SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~--~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|++ ++.|+|+++ ||-.+-| .+..++++++++.+ ++.++++++.+.......++......+.++.+
T Consensus 312 k~~l~~~~gl~~d~~~p~i~~v--gRl~~~K-g~~~li~a~~~l~~--~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~ 386 (536)
T 3vue_A 312 KEALQAEAGLPVDRKIPLIAFI--GRLEEQK-GPDVMAAAIPELMQ--EDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRA 386 (536)
T ss_dssp HHHHHHHTTSCCCTTSCEEEEE--CCBSGGG-CHHHHHHHHHHHTT--SSCEEEEECCBCHHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEE--eeccccC-ChHHHHHHHHHhHh--hCCeEEEEeccCchHHHHHHHHHhhcCCceEE
Confidence 45566778876 466888887 4554433 47889999999875 36787777766444444454444555557777
Q ss_pred ecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHH
Q 016179 305 VPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEW 353 (394)
Q Consensus 305 ~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~ 353 (394)
..++..+++..+|+.||++|..| |.+.+|||++|+|+|+ .+.+++...
T Consensus 387 ~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~-s~~gG~~e~ 439 (536)
T 3vue_A 387 VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCAC-ASTGGLVDT 439 (536)
T ss_dssp ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEE-CSCTHHHHH
T ss_pred EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEE-cCCCCchhe
Confidence 65543566889999999999998 7788899999999885 677666544
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=7.5e-10 Score=106.25 Aligned_cols=275 Identities=13% Similarity=0.094 Sum_probs=144.1
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhh--HHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPH--IYKFRVRLKET 108 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~--~~~~~~~~~~~ 108 (394)
|||+|+..+..||+. +..++++|++..|+ +++..++++.+++. +...-...++-........+. ....++.+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~-a~I~~l~~~~~~~l-~~~~p~vd~vi~~~~~~~~~~~~~~~~~~~~~~~ 78 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPG-IKFDWVVEEGFAQI-PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAF 78 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTT-CEEEEEEEGGGTHH-HHTSTTEEEEEEECHHHHHTTTTSHHHHHHHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCC-CEEEEEEehhhhHH-HhcCCCCCEEEEccHHHhhhccchHHHHHHHHHH
Confidence 689999999999996 99999999999996 88888877655322 110000011111111000000 12234445567
Q ss_pred HHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheeecC--cccH
Q 016179 109 IEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL--PNEE 186 (394)
Q Consensus 109 ~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~~~--p~~~ 186 (394)
.+.+++.++|++|... + +.+.+..+.... + +..+.|..++. +.+ +... +.++.+... ..+.
T Consensus 79 ~~~lr~~~~D~vidl~--~-~~~s~~~~~~l~-----~-~~~ig~~~~~~---~~~--~~~~---~~~~~~~~~~~~h~~ 141 (326)
T 2gt1_A 79 REALQAKNYDAVIDAQ--G-LVKSAALVTRLA-----H-GVKHGMDWQTA---REP--LASL---FYNRKHHIAKQQHAV 141 (326)
T ss_dssp HHHHHHSBCSEEEECS--C-CHHHHHHTGGGS-----B-SCEEEECTTTS---SSG--GGGG---GCSEEECCCSSSCHH
T ss_pred HHHHhccCCCEEEECC--c-cHHHHHHHHHHc-----C-CcEEccCcCcc---cch--hHHh---hhccccCCCcCcCHH
Confidence 7788889999999543 2 233221121111 3 32456644431 100 0000 112221111 1222
Q ss_pred HHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhh-HHHHHHHH
Q 016179 187 AICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM-LPIFAKTV 265 (394)
Q Consensus 187 ~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~-l~~ll~a~ 265 (394)
+.+.+. . ....|.|..+....+ ....+..++.+. .+++.|++.|||+..+ ++. ...+.+.+
T Consensus 142 ~~~~~l-l-~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~i~l~pga~~~~-k~wp~~~~~~l~ 203 (326)
T 2gt1_A 142 ERTREL-F-AKSLGYSKPQTQGDY--------------AIAQHFLTNLPT-DAGEYAVFLHATTRDD-KHWPEEHWRELI 203 (326)
T ss_dssp HHHHHH-H-HHHHTCCCCSSCCCC--------------CCHHHHHTTCCT-TTTSEEEEECCCSSGG-GSCCHHHHHHHH
T ss_pred HHHHHH-H-HHHcCCCCCCCCccc--------------ccCchhhhhccc-cCCCEEEEEeCCCCcc-ccCCHHHHHHHH
Confidence 222110 0 011243332110000 011122233333 3567899999998743 221 33677777
Q ss_pred HHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceeh-hhHHHHHHHHcCCCEEEE
Q 016179 266 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCT-SGTVAVELQLARLPCVVA 344 (394)
Q Consensus 266 ~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~-SGt~tlEa~a~G~P~Iv~ 344 (394)
+.|.+ .++++++..|+ ....+..++.....+ ++.+.......+..++++.||++|+. ||++.+ |+++|+|+|.+
T Consensus 204 ~~L~~--~~~~vvl~~g~-~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~l~I~~DSG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 204 GLLAD--SGIRIKLPWGA-PHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHL-TAALDRPNITV 278 (326)
T ss_dssp HHTTT--TCCEEEECCSS-HHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCSEEEEESSHHHHH-HHHTTCCEEEE
T ss_pred HHHHH--CCCcEEEecCC-HHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCCEEEecCCcHHHH-HHHcCCCEEEE
Confidence 77764 37888776453 222233344333332 34443211146788999999999999 999999 77799999999
Q ss_pred EcCC
Q 016179 345 YRAH 348 (394)
Q Consensus 345 y~~~ 348 (394)
|...
T Consensus 279 fg~t 282 (326)
T 2gt1_A 279 YGPT 282 (326)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 8654
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-09 Score=110.13 Aligned_cols=120 Identities=10% Similarity=0.041 Sum_probs=71.4
Q ss_pred HhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCc
Q 016179 231 KNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSS 310 (394)
Q Consensus 231 r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~ 310 (394)
.+-++..+++++|++..||.+..-.+.+..++++ +.+ .+.+|+++++++. ....-+......+.++.++. + .
T Consensus 262 ~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~---l~~--~~~~~lw~~~~~~-~~~l~~~~~~~~~~~~~v~~-w-~ 333 (456)
T 2c1x_A 262 LQWLKERKPTSVVYISFGTVTTPPPAEVVALSEA---LEA--SRVPFIWSLRDKA-RVHLPEGFLEKTRGYGMVVP-W-A 333 (456)
T ss_dssp HHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH---HHH--HTCCEEEECCGGG-GGGSCTTHHHHHTTTEEEES-C-C
T ss_pred HHHHhcCCCcceEEEecCccccCCHHHHHHHHHH---HHh--cCCeEEEEECCcc-hhhCCHHHHhhcCCceEEec-C-C
Confidence 3344445677899999999984211222333333 332 2578999987532 11100011111122577664 3 3
Q ss_pred chHHHHHH--HcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 311 NLKYDAFS--ASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 311 ~~~~~~~~--~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
+++ ++|+ ++|++||.+|..|+ |++++|+|+|++ +...--+.-++++++
T Consensus 334 pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~-P~~~dQ~~Na~~l~~ 384 (456)
T 2c1x_A 334 PQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICR-PFFGDQRLNGRMVED 384 (456)
T ss_dssp CHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHHH
T ss_pred CHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEec-CChhhHHHHHHHHHH
Confidence 554 6788 88999999999887 999999999975 443323334666653
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2e-09 Score=108.75 Aligned_cols=119 Identities=9% Similarity=-0.059 Sum_probs=71.3
Q ss_pred HHhhcCCCCCCcEEEEECCCcH-HHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCC-cChHHHHHHHhhcCCCCEEEecC
Q 016179 230 FKNKYSVPSGATVISLLPGSRL-QEVARMLPIFAKTVELLKDSFPELITVIHVAPN-RHVENYITGLIQKWPVPSILVPG 307 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg-~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~-~~~~~~l~~~~~~~~~~v~~~~g 307 (394)
..+-++-.+++++|++..||.+ .--.+.+..++++ |.+ .+.+|+++++.+ ..+.+.+.+.... ..++.++.
T Consensus 266 ~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~---l~~--~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~v~~- 338 (463)
T 2acv_A 266 ILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG---LKH--SGVRFLWSNSAEKKVFPEGFLEWMEL-EGKGMICG- 338 (463)
T ss_dssp HHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHH---HHH--HTCEEEEECCCCGGGSCTTHHHHHHH-HCSEEEES-
T ss_pred HHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHH---HHh--CCCcEEEEECCCcccCChhHHHhhcc-CCCEEEEc-
Confidence 3444444567789999999998 3101112233333 433 258899999864 1111112222200 12566665
Q ss_pred CCcchHHHHHH--HcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhh
Q 016179 308 GSSNLKYDAFS--ASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYK 358 (394)
Q Consensus 308 ~~~~~~~~~~~--~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~ 358 (394)
+ .+++ ++|+ ++|++||.+|..|+ |++++|+|+|++ +...--+.-++++
T Consensus 339 w-~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~-P~~~dQ~~Na~~l 389 (463)
T 2acv_A 339 W-APQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTW-PIYAEQQLNAFRL 389 (463)
T ss_dssp S-CCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC-CCSTTHHHHHHHH
T ss_pred c-CCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeec-cchhhhHHHHHHH
Confidence 4 3565 5675 89999999999887 999999999975 5433333446764
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.9e-09 Score=113.08 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=82.9
Q ss_pred HHhhcCC--CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc---------ChHHHHHHHhhcC
Q 016179 230 FKNKYSV--PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR---------HVENYITGLIQKW 298 (394)
Q Consensus 230 ~r~~lgl--~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~---------~~~~~l~~~~~~~ 298 (394)
.++.+|+ +++.++|+.+| |-.. .+.+..++++++.+.+..+++++++++++.. ...+.+++...++
T Consensus 560 ~r~~lg~l~~~~~~vIl~vG--Rl~~-~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMA--RLDR-VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp BTTEESCBSCTTSCEEEEEC--CCCT-TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcccCCCCCeEEEEEc--cCcc-cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHc
Confidence 3456777 67788888874 3332 3457789999999877667899999887641 0233455555555
Q ss_pred CC--CEEEecCCC-----cchHHHHHH-Hcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 299 PV--PSILVPGGS-----SNLKYDAFS-ASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 299 ~~--~v~~~~g~~-----~~~~~~~~~-~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
++ ++.++ |+. .++++.+|+ +||++|..| |.+.+|||+||+|+|. .+.+.....+
T Consensus 637 gL~~~V~fl-G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIa-sd~GG~~EiV 703 (816)
T 3s28_A 637 KLNGQFRWI-SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA-TCKGGPAEII 703 (816)
T ss_dssp TCBBBEEEE-CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEE-ESSBTHHHHC
T ss_pred CCCCcEEEc-cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEE-eCCCChHHHH
Confidence 54 46666 321 145778888 689999988 7777899999999886 5777666555
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3.1e-10 Score=103.36 Aligned_cols=124 Identities=10% Similarity=0.036 Sum_probs=76.2
Q ss_pred hcCCCCCCcEEEEECCCcHHHHHhhHHHHH--HHHHHhhhhCCCeEEEEEeCCCcC--hHHHHHHH--------h-----
Q 016179 233 KYSVPSGATVISLLPGSRLQEVARMLPIFA--KTVELLKDSFPELITVIHVAPNRH--VENYITGL--------I----- 295 (394)
Q Consensus 233 ~lgl~~~~~~IlllgGSrg~ei~~~l~~ll--~a~~~l~~~~~~~~~vi~~g~~~~--~~~~l~~~--------~----- 295 (394)
.+++++++|+|++++||+.. ++++++.++ +.++.|.+. +..++++++|.+.. ..+..... .
T Consensus 21 ~~~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~-~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 21 MLEGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQY-GFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp ---CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTT-TCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTT
T ss_pred ccCCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcC-CCeEEEEEECCCchhhHHHHHHhhhccccccccccccc
Confidence 46777888999999999852 344333221 122444432 23789999997532 11111121 0
Q ss_pred -----------hcCCCCEEEecCCCcchHHHHHH-HcccceehhhHHHH-HHHHcCCCEEEEEcC---ChHHHHHHHhhc
Q 016179 296 -----------QKWPVPSILVPGGSSNLKYDAFS-ASRVALCTSGTVAV-ELQLARLPCVVAYRA---HFLTEWFIRYKA 359 (394)
Q Consensus 296 -----------~~~~~~v~~~~g~~~~~~~~~~~-~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~---~~~~~~~a~~~v 359 (394)
...+.++.++ +| .++|.++|+ +||++||++|+.|+ |++++|+|+|++... +.--...|+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~-~f-~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGF-DF-STKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEEC-CS-SSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEe-ec-cchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 0112244555 34 589999999 99999999999998 999999999987432 122233366665
Q ss_pred c
Q 016179 360 K 360 (394)
Q Consensus 360 k 360 (394)
+
T Consensus 177 ~ 177 (224)
T 2jzc_A 177 E 177 (224)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-08 Score=100.62 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=86.4
Q ss_pred HHHHhhhheeecCcccHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCC-cEEEEECC
Q 016179 170 NLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGA-TVISLLPG 248 (394)
Q Consensus 170 ~l~~~~d~v~~~~p~~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~-~~IlllgG 248 (394)
++.+.+|.+++.++..++.+.+.+ ++.++.|.+........ ++ . +.+. ++|+.+ |
T Consensus 174 ~~~~~ad~vi~~S~~~~~~~~~~~-~i~vipngvd~~~f~~~--------------~~----~----~~~~~~~i~~v-G 229 (406)
T 2hy7_A 174 RVAPTLDVIALVSPAMAAEVVSRD-NVFHVGHGVDHNLDQLG--------------DP----S----PYAEGIHAVAV-G 229 (406)
T ss_dssp HHGGGCSEEEESCGGGGGGCSCST-TEEECCCCBCTTHHHHH--------------CS----C----SCCSSEEEEEE-C
T ss_pred HHHHhCCEEEEcCHHHHHHHHhcC-CEEEEcCCcChHhcCcc--------------cc----c----ccCCCcEEEEE-e
Confidence 356779999999999998887777 88888877644322100 00 0 2233 556655 4
Q ss_pred CcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccceehh
Q 016179 249 SRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVALCTS 327 (394)
Q Consensus 249 Srg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~I~~S 327 (394)
... +.+.. ++.+.+..|++++++++.+. .++ .....++.+. |+. .+++.++|++||++|..|
T Consensus 230 rl~-~~Kg~-------~~~l~~~~~~~~l~ivG~g~------~~~--~~l~~~V~f~-G~~~~~~l~~~~~~adv~v~ps 292 (406)
T 2hy7_A 230 SML-FDPEF-------FVVASKAFPQVTFHVIGSGM------GRH--PGYGDNVIVY-GEMKHAQTIGYIKHARFGIAPY 292 (406)
T ss_dssp CTT-BCHHH-------HHHHHHHCTTEEEEEESCSS------CCC--TTCCTTEEEE-CCCCHHHHHHHHHTCSEEECCB
T ss_pred ccc-cccCH-------HHHHHHhCCCeEEEEEeCch------HHh--cCCCCCEEEc-CCCCHHHHHHHHHhcCEEEECC
Confidence 433 22332 33344456889998887542 111 0122367776 443 368999999999999987
Q ss_pred -----hHHHHHHH-------HcCCCEEEE
Q 016179 328 -----GTVAVELQ-------LARLPCVVA 344 (394)
Q Consensus 328 -----Gt~tlEa~-------a~G~P~Iv~ 344 (394)
|.+.+||+ +||+|+|..
T Consensus 293 ~~E~~~~~~lEAm~Kl~eYla~G~PVIas 321 (406)
T 2hy7_A 293 ASEQVPVYLADSSMKLLQYDFFGLPAVCP 321 (406)
T ss_dssp SCSCCCTTHHHHCHHHHHHHHHTCCEEEE
T ss_pred CcccCchHHHHHHHHHHHHhhCCCcEEEe
Confidence 55667999 999998864
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=89.65 Aligned_cols=123 Identities=14% Similarity=0.188 Sum_probs=86.9
Q ss_pred hHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhh--hhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK--DSFPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~--~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+|+++|++++ ++|+.+| +.... .+.+..+++++..+. ++.+++++++++.+..+..+.+++...+.+ ++++
T Consensus 24 ~~~~r~~~~~~~~-~~i~~~G-~~~~~-~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~ 99 (200)
T 2bfw_A 24 KKSLLSKFGMDEG-VTFMFIG-RFDRG-QKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKV 99 (200)
T ss_dssp HHHHHHHTTCCSC-EEEEEES-CBCSS-SSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEE
T ss_pred HHHHHHHcCCCCC-CEEEEee-ccccc-cCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEE
Confidence 5678899999754 5666654 33201 234677889999987 666889998887654223455666666666 7887
Q ss_pred ecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 305 VPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 305 ~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
..|+. .+++.++|+.||++|..| |.+.+|++++|+|+|+ ++.+....++
T Consensus 100 ~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~-~~~~~~~e~~ 154 (200)
T 2bfw_A 100 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA-SAVGGLRDII 154 (200)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE-ESCHHHHHHC
T ss_pred EeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEE-eCCCChHHHc
Confidence 23443 348999999999999988 7777899999999775 6666655544
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=98.70 E-value=2.4e-06 Score=86.41 Aligned_cols=109 Identities=15% Similarity=0.029 Sum_probs=67.2
Q ss_pred CCCcEEEEECCCcHH-HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC------hHHHHHHHhhcCCCCEEEecCCCc
Q 016179 238 SGATVISLLPGSRLQ-EVARMLPIFAKTVELLKDSFPELITVIHVAPNRH------VENYITGLIQKWPVPSILVPGGSS 310 (394)
Q Consensus 238 ~~~~~IlllgGSrg~-ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~------~~~~l~~~~~~~~~~v~~~~g~~~ 310 (394)
+++++|++..||.+. ..+. +..++++ |.+ .+.+|+++++++.. +.+.+.+.. ..++.++. + .
T Consensus 293 ~~~~vv~vs~GS~~~~~~~~-~~~~~~~---l~~--~~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~v~~-~-~ 361 (482)
T 2pq6_A 293 EPGSVVYVNFGSTTVMTPEQ-LLEFAWG---LAN--CKKSFLWIIRPDLVIGGSVIFSSEFTNEI---ADRGLIAS-W-C 361 (482)
T ss_dssp CTTCEEEEECCSSSCCCHHH-HHHHHHH---HHH--TTCEEEEECCGGGSTTTGGGSCHHHHHHH---TTTEEEES-C-C
T ss_pred CCCceEEEecCCcccCCHHH-HHHHHHH---HHh--cCCcEEEEEcCCccccccccCcHhHHHhc---CCCEEEEe-e-c
Confidence 457899999999874 2222 3333344 433 35889999875310 111121212 23677775 4 3
Q ss_pred chHHHHHHH--cccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 311 NLKYDAFSA--SRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 311 ~~~~~~~~~--ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
+++ ++|+. +|++||.+|..|+ |++++|+|+|++ +...--+.-|++++
T Consensus 362 pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~-P~~~dQ~~na~~~~ 411 (482)
T 2pq6_A 362 PQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW-PFFADQPTDCRFIC 411 (482)
T ss_dssp CHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHH
T ss_pred CHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEec-CcccchHHHHHHHH
Confidence 565 58855 5569999999887 999999999975 44433333466555
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=5.3e-07 Score=91.37 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=71.1
Q ss_pred hHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCCc----C---hHHHHHHHh
Q 016179 227 SEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPNR----H---VENYITGLI 295 (394)
Q Consensus 227 ~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~~----~---~~~~l~~~~ 295 (394)
..++|++++ ++++|+.+ +|-...| .++.+++|++.+.+++|+ +++++++++.. + +++.+++..
T Consensus 245 ~~~lr~~~~---~~~vil~V--gRl~~~K-gi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~ 318 (482)
T 1uqt_A 245 LAQLKAELK---NVQNIFSV--ERLDYSK-GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEA 318 (482)
T ss_dssp HHHHHHHTT---TCEEEEEE--CCBCGGG-CHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC---CCEEEEEE--eCCcccC-CHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHH
Confidence 346777876 56666665 3554444 478899999998777664 67777775421 1 222333332
Q ss_pred hc----CC----CCEEEecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCC
Q 016179 296 QK----WP----VPSILVPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARL 339 (394)
Q Consensus 296 ~~----~~----~~v~~~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~ 339 (394)
.+ .+ .++.++.++. .+++.++|++||++|..| |.+.+|+++||+
T Consensus 319 ~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~ 376 (482)
T 1uqt_A 319 GRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD 376 (482)
T ss_dssp HHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSC
T ss_pred HHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCC
Confidence 21 11 1466655433 578999999999999999 677789999998
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=8.1e-06 Score=81.99 Aligned_cols=121 Identities=13% Similarity=0.091 Sum_probs=73.6
Q ss_pred HHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHH-HHHhhcCCCCEEEecC
Q 016179 229 DFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYI-TGLIQKWPVPSILVPG 307 (394)
Q Consensus 229 ~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l-~~~~~~~~~~v~~~~g 307 (394)
+..+-++-.+++++|++..||.+..-.+.+..+.++ |.+ .+.+|++++++.. . +.+ +........++.++.
T Consensus 262 ~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~---l~~--~~~~flw~~~~~~-~-~~lp~~~~~~~~~~~~vv~- 333 (454)
T 3hbf_A 262 GCLEWLDQHENSSVVYISFGSVVTPPPHELTALAES---LEE--CGFPFIWSFRGDP-K-EKLPKGFLERTKTKGKIVA- 333 (454)
T ss_dssp CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH---HHH--HCCCEEEECCSCH-H-HHSCTTHHHHTTTTEEEES-
T ss_pred HHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHH---HHh--CCCeEEEEeCCcc-h-hcCCHhHHhhcCCceEEEe-
Confidence 344445545678999999999985211112333333 433 2578999988632 1 111 111111223677774
Q ss_pred CCcchHHHHHHHcc--cceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhcc
Q 016179 308 GSSNLKYDAFSASR--VALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKAK 360 (394)
Q Consensus 308 ~~~~~~~~~~~~AD--l~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~vk 360 (394)
+ .++ .++++.+| ++|+.+|..|+ |++++|+|+|++ +...--+.-++++++
T Consensus 334 w-~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~-P~~~DQ~~Na~~v~~ 386 (454)
T 3hbf_A 334 W-APQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISR-PFFGDQGLNTILTES 386 (454)
T ss_dssp S-CCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHHT
T ss_pred e-CCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecC-cccccHHHHHHHHHH
Confidence 4 345 58899999 99999998776 999999999975 443333333666653
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.7e-07 Score=79.62 Aligned_cols=105 Identities=12% Similarity=0.064 Sum_probs=66.9
Q ss_pred CCCCcEEEEECCCcHHH-HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHH
Q 016179 237 PSGATVISLLPGSRLQE-VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYD 315 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~e-i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 315 (394)
.++.++|+++.||.+.. .++.+..++++++ + . +.+++++++++. .+ ....++++.. + .++ .+
T Consensus 18 ~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~---~-~-~~~~~~~~g~~~-~~--------~~~~~v~~~~-~-~~~-~~ 80 (170)
T 2o6l_A 18 SGENGVVVFSLGSMVSNMTEERANVIASALA---Q-I-PQKVLWRFDGNK-PD--------TLGLNTRLYK-W-IPQ-ND 80 (170)
T ss_dssp TTTTCEEEEECCSCCTTCCHHHHHHHHHHHT---T-S-SSEEEEECCSSC-CT--------TCCTTEEEES-S-CCH-HH
T ss_pred CCCCCEEEEECCCCcccCCHHHHHHHHHHHH---h-C-CCeEEEEECCcC-cc--------cCCCcEEEec-C-CCH-HH
Confidence 34567899999998732 1233444555443 2 2 478888887642 11 1233677764 3 344 56
Q ss_pred HH--HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 316 AF--SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 316 ~~--~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
++ ++||++|+.+|..|+ |++++|+|+|++. ...--...++++.
T Consensus 81 ~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p-~~~~Q~~na~~l~ 126 (170)
T 2o6l_A 81 LLGHPKTRAFITHGGANGIYEAIYHGIPMVGIP-LFADQPDNIAHMK 126 (170)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC-CSTTHHHHHHHHH
T ss_pred HhcCCCcCEEEEcCCccHHHHHHHcCCCEEecc-chhhHHHHHHHHH
Confidence 77 999999999998887 9999999999753 3322233355554
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=5e-06 Score=82.43 Aligned_cols=139 Identities=5% Similarity=0.008 Sum_probs=86.7
Q ss_pred heeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH
Q 016179 177 HILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE 253 (394)
Q Consensus 177 ~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e 253 (394)
.+++.++..++.+.+.|++ +.++-+.+..+... .+ ..+ .++.+.|++.|+...
T Consensus 197 ~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~--------------------~~-~~~-~~~~~~il~~gr~~~-- 252 (413)
T 2x0d_A 197 IAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKN--------------------YI-NDK-RQKEKIILVYGRPSV-- 252 (413)
T ss_dssp EEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHT--------------------TT-TSC-CCCCSEEEEEECTTC--
T ss_pred EEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhc--------------------cc-ccc-cCCCCEEEEEecCch--
Confidence 4677889899988877654 33443333222110 00 111 234566777754211
Q ss_pred HHhhHHHHHHHHHHhhhhCCC---eEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh---
Q 016179 254 VARMLPIFAKTVELLKDSFPE---LITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS--- 327 (394)
Q Consensus 254 i~~~l~~ll~a~~~l~~~~~~---~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S--- 327 (394)
-++.+..+++|++.+.++.|+ +++++++.+... . + + ....++++......+++.++|+.||++|..|
T Consensus 253 ~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~--~---~-l-~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E 325 (413)
T 2x0d_A 253 KRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD--I---A-L-GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISP 325 (413)
T ss_dssp GGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC--E---E-E-ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSS
T ss_pred hccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh--h---h-c-CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCC
Confidence 234567889999998877775 898888865321 1 1 1 1112466653211478999999999999877
Q ss_pred --hHHHHHHHHcCCCEEEEEcC
Q 016179 328 --GTVAVELQLARLPCVVAYRA 347 (394)
Q Consensus 328 --Gt~tlEa~a~G~P~Iv~y~~ 347 (394)
|.+.+|||+||+|+|. ...
T Consensus 326 ~~g~~~lEAmA~G~PVV~-~~~ 346 (413)
T 2x0d_A 326 HPSYPPLEMAHFGLRVIT-NKY 346 (413)
T ss_dssp SCCSHHHHHHHTTCEEEE-ECB
T ss_pred CCCcHHHHHHhCCCcEEE-eCC
Confidence 6677899999999886 444
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.4e-06 Score=73.11 Aligned_cols=111 Identities=13% Similarity=0.059 Sum_probs=73.0
Q ss_pred hcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhh----cCCCCEEEecCC
Q 016179 233 KYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQ----KWPVPSILVPGG 308 (394)
Q Consensus 233 ~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~----~~~~~v~~~~g~ 308 (394)
.+++++++++|+.+|.-.. .+.+..++++++.+ +++++++++.+... +.+++... ....++.+....
T Consensus 16 ~~~~~~~~~~i~~~G~~~~---~Kg~~~li~a~~~l----~~~~l~i~G~~~~~--~~l~~~~~~~~~~l~~~v~~~g~~ 86 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYP---EKRIELQLEVFKKL----QDEKLYIVGWFSKG--DHAERYARKIMKIAPDNVKFLGSV 86 (177)
T ss_dssp TCCCCCCCSCEEEECCSSG---GGTHHHHHHHHHHC----TTSCEEEEBCCCTT--STHHHHHHHHHHHSCTTEEEEESC
T ss_pred ccccCCCCCEEEEEecccc---ccCHHHHHHHHHhC----CCcEEEEEecCccH--HHHHHHHHhhhcccCCcEEEeCCC
Confidence 4667888888887754332 23466788888776 57888888765331 22333333 233367776432
Q ss_pred CcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHH
Q 016179 309 SSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEW 353 (394)
Q Consensus 309 ~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~ 353 (394)
..+++.++|+.||++|..| |.+.+|++++|+|+|+ .+.+.....
T Consensus 87 ~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~-~~~~~~~e~ 135 (177)
T 2f9f_A 87 SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIA-VNEGGFKET 135 (177)
T ss_dssp CHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEE-ESSHHHHHH
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEE-eCCCCHHHH
Confidence 1345999999999999966 6666799999999886 555544443
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.32 E-value=7e-07 Score=76.14 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=70.7
Q ss_pred EEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHc
Q 016179 242 VISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSAS 320 (394)
Q Consensus 242 ~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~A 320 (394)
.+++..|+... .+....++++++.+.+ .+++++++++.+. . .+.+++...+.+.++.+ ++. .+++.++|+.|
T Consensus 3 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~-~-~~~~~~~~~~~~~~v~~--g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 3 FKIAMVGRYSN--EKNQSVLIKAVALSKY-KQDIVLLLKGKGP-D-EKKIKLLAQKLGVKAEF--GFVNSNELLEILKTC 75 (166)
T ss_dssp EEEEEESCCST--TTTHHHHHHHHHTCTT-GGGEEEEEECCST-T-HHHHHHHHHHHTCEEEC--CCCCHHHHHHHHTTC
T ss_pred eEEEEEeccch--hcCHHHHHHHHHHhcc-CCCeEEEEEeCCc-c-HHHHHHHHHHcCCeEEE--eecCHHHHHHHHHhC
Confidence 34444455432 3446788899988853 4789988887653 2 34566666665555554 543 46899999999
Q ss_pred ccceehh-----hHHHHHHHHcCC-CEEEEEcCChHH
Q 016179 321 RVALCTS-----GTVAVELQLARL-PCVVAYRAHFLT 351 (394)
Q Consensus 321 Dl~I~~S-----Gt~tlEa~a~G~-P~Iv~y~~~~~~ 351 (394)
|++|..| |.+.+||+++|+ |+|.....+...
T Consensus 76 dv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~ 112 (166)
T 3qhp_A 76 TLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR 112 (166)
T ss_dssp SEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG
T ss_pred CEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh
Confidence 9999988 667779999997 977645555544
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00016 Score=72.93 Aligned_cols=114 Identities=11% Similarity=0.056 Sum_probs=65.5
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCc--------------ChHHHH-HHHhhcCCCCE
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNR--------------HVENYI-TGLIQKWPVPS 302 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~--------------~~~~~l-~~~~~~~~~~v 302 (394)
+++++|++..||.+..-.+.+..++++++ + .+.+|+++++... ++...+ +...+....+.
T Consensus 266 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~---~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g 340 (480)
T 2vch_A 266 PLGSVLYVSFGSGGTLTCEQLNELALGLA---D--SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRG 340 (480)
T ss_dssp CTTCEEEEECTTTCCCCHHHHHHHHHHHH---H--TTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTE
T ss_pred CCCceEEEecccccCCCHHHHHHHHHHHH---h--cCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCe
Confidence 45789999999987411112233444433 3 3578999886531 110000 00000111122
Q ss_pred EEecCCCcchHHHHHHHcc--cceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 303 ILVPGGSSNLKYDAFSASR--VALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 303 ~~~~g~~~~~~~~~~~~AD--l~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.++.++ .+++ ++++.+| ++|+-.|..|+ |++++|+|+|++ +...--+.-+++++
T Consensus 341 ~~v~~w-~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~-P~~~DQ~~na~~l~ 397 (480)
T 2vch_A 341 FVIPFW-APQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW-PLYAEQKMNAVLLS 397 (480)
T ss_dssp EEEESC-CCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHH
T ss_pred EEEeCc-cCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEec-cccccchHHHHHHH
Confidence 344433 3454 8998888 89999998776 999999999974 55443344467654
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00016 Score=73.02 Aligned_cols=115 Identities=10% Similarity=0.068 Sum_probs=72.8
Q ss_pred HHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC---eEEEEEeCCC----cC---hHHHHHHHhhc
Q 016179 228 EDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE---LITVIHVAPN----RH---VENYITGLIQK 297 (394)
Q Consensus 228 ~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~---~~~vi~~g~~----~~---~~~~l~~~~~~ 297 (394)
.++|++++ ++++|+.+ +|-...| .++.+++|+ ++.+++|+ +.+++++++. ++ +++.++++..+
T Consensus 272 ~~lr~~~~---~~~lIl~V--gRLd~~K-Gi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~ 344 (496)
T 3t5t_A 272 EGIEEWAD---GHRLVVHS--GRTDPIK-NAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAE 344 (496)
T ss_dssp TTHHHHHT---TSEEEEEE--EESSGGG-CHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC---CceEEEEc--ccCcccc-CHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 56777776 56666665 4655444 467888999 87777776 4566666432 11 22223333221
Q ss_pred C----CC-CEEEecCCCcchHHHHHHHcccceehh-----hHHHHHHHHcC---CCEEEEEcCChH
Q 016179 298 W----PV-PSILVPGGSSNLKYDAFSASRVALCTS-----GTVAVELQLAR---LPCVVAYRAHFL 350 (394)
Q Consensus 298 ~----~~-~v~~~~g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G---~P~Iv~y~~~~~ 350 (394)
. +. ++.++.....+++.++|++||+++..| |.+.+|+++|| .|.|+ ....+.
T Consensus 345 in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVl-Se~aGa 409 (496)
T 3t5t_A 345 ANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVIL-SETCGA 409 (496)
T ss_dssp HHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEE-ETTBTT
T ss_pred hccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEE-eCCCCC
Confidence 1 11 466653222467999999999999999 77888999996 67665 454433
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00081 Score=69.41 Aligned_cols=119 Identities=11% Similarity=0.128 Sum_probs=70.1
Q ss_pred HhhcCCCCC--CcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEE-EeCCCcCh-HHHHHHHhh-cCCCCEEEe
Q 016179 231 KNKYSVPSG--ATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVI-HVAPNRHV-ENYITGLIQ-KWPVPSILV 305 (394)
Q Consensus 231 r~~lgl~~~--~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi-~~g~~~~~-~~~l~~~~~-~~~~~v~~~ 305 (394)
+..++++++ ..+++.+ .+. .++.|.++++..++.++.|+-.+++ ..|..... ...+++... +...++.+.
T Consensus 430 r~~~~lp~~~G~v~Fg~f--n~~---~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~ 504 (631)
T 3q3e_A 430 KVDYLLRENPEVVNIGIA--STT---MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAH 504 (631)
T ss_dssp SCCCCCCSCCSEEEEEEE--ECS---TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEE
T ss_pred cccccCCcCCCeEEEEEC--Ccc---ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEc
Confidence 345778775 3344443 333 2456888898888888888865432 23321111 222222211 111256555
Q ss_pred cCCCcchHHHHHHHcccceehh----hHHHHHHHHcCCCEEEEEcCChHHHHHH
Q 016179 306 PGGSSNLKYDAFSASRVALCTS----GTVAVELQLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 306 ~g~~~~~~~~~~~~ADl~I~~S----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a 355 (394)
+.....+..+.++.+|+++-.+ |++|+||+++|+|+|. .....+...++
T Consensus 505 g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVT-l~G~~~asRvg 557 (631)
T 3q3e_A 505 PHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVC-KTGAEVHEHID 557 (631)
T ss_dssp CCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEE-ECCSSHHHHHH
T ss_pred CCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEe-ccCCcHHHHhH
Confidence 3211345667889999999876 5666799999999774 56665554443
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00031 Score=73.08 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=36.7
Q ss_pred hHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHHHH
Q 016179 312 LKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a 355 (394)
++.++|+.||++|..| |.+.+||++||+|+|. ...+++..++.
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~-s~~gG~~d~V~ 558 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSIT-TNVSGFGSYME 558 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEE-ETTBHHHHHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEE-eCCCChhhhhh
Confidence 5899999999999999 7788899999999875 78777765553
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00026 Score=68.19 Aligned_cols=186 Identities=9% Similarity=-0.051 Sum_probs=106.1
Q ss_pred cCCCEEEEeCCCCch-----HHHHHHHHHhccccCCCCCeEEEeecCccccccC--cchHH---HHHHHhhhheeecCcc
Q 016179 115 FRPHAVVTVDSKGFS-----FRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKG--GEARL---KNLAAFVDHILCILPN 184 (394)
Q Consensus 115 ~~PD~Vi~~~~~~f~-----~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~--g~~r~---~~l~~~~d~v~~~~p~ 184 (394)
.++|+||.. +|.++ ..+.++++++ ++|++ +. .+.+|.... ..... ..+.+.+|.+++.++.
T Consensus 73 ~~~DvIi~q-~P~~~~~~~~~~~~~~lk~~------~~k~i-~~-ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~ 143 (339)
T 3rhz_A 73 RHGDVVIFQ-TPTWNTTEFDEKLMNKLKLY------DIKIV-LF-IHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQK 143 (339)
T ss_dssp CTTCEEEEE-ECCSSCHHHHHHHHHHHTTS------SCEEE-EE-ESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHH
T ss_pred CCCCEEEEe-CCCcchhhHHHHHHHHHHhc------CCEEE-EE-ecccHHhhCccchhhHHHHHHHHHHCCEEEECCHH
Confidence 468988864 55432 2344455432 67853 33 455554221 00111 2468889999999999
Q ss_pred cHHHHHhcCCC-eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHH
Q 016179 185 EEAICRLNGLA-ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 263 (394)
Q Consensus 185 ~~~~~~~~g~~-~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~ 263 (394)
.++.+.++|++ ..++=.+..+... +. ....+.+.+ +++..|+-+. . .
T Consensus 144 ~~~~l~~~G~~~~ki~~~~~~~~~~-----------------~~-----~~~~~~~~~-~i~yaG~l~k-~-~------- 191 (339)
T 3rhz_A 144 MIDKLRDFGMNVSKTVVQGMWDHPT-----------------QA-----PMFPAGLKR-EIHFPGNPER-F-S------- 191 (339)
T ss_dssp HHHHHHHTTCCCSEEEECCSCCCCC-----------------CC-----CCCCCEEEE-EEEECSCTTT-C-G-------
T ss_pred HHHHHHHcCCCcCceeecCCCCccC-----------------cc-----cccccCCCc-EEEEeCCcch-h-h-------
Confidence 99999988986 3332122212100 00 011222334 4556677762 1 1
Q ss_pred HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHccccee-hhhH-----------HH
Q 016179 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC-TSGT-----------VA 331 (394)
Q Consensus 264 a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~-~SGt-----------~t 331 (394)
.+..+ .++++|++++.+... +.+ ++++......++++++++.+|+.+. .+|. -.
T Consensus 192 ~L~~l---~~~~~f~ivG~G~~~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl 257 (339)
T 3rhz_A 192 FVKEW---KYDIPLKVYTWQNVE----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKL 257 (339)
T ss_dssp GGGGC---CCSSCEEEEESCCCC----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHH
T ss_pred HHHhC---CCCCeEEEEeCCccc----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHH
Confidence 11122 368999999876431 134 7887743335789999987776665 3442 23
Q ss_pred HHHHHcCCCEEEEEcCChHHHHHHH
Q 016179 332 VELQLARLPCVVAYRAHFLTEWFIR 356 (394)
Q Consensus 332 lEa~a~G~P~Iv~y~~~~~~~~~a~ 356 (394)
.|++++|+|+|+ .+.+.+..++..
T Consensus 258 ~eymA~G~PVI~-~~~~~~~~~v~~ 281 (339)
T 3rhz_A 258 GSFLAAGIPVIV-QEGIANQELIEN 281 (339)
T ss_dssp HHHHHHTCCEEE-ETTCTTTHHHHH
T ss_pred HHHHHcCCCEEE-ccChhHHHHHHh
Confidence 499999999885 666666656543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0022 Score=67.91 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=86.3
Q ss_pred HHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCC---CEEEec
Q 016179 230 FKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV---PSILVP 306 (394)
Q Consensus 230 ~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~---~v~~~~ 306 (394)
.|+.+||+++..|.+.+ .+. .++.|.+++...+|.++.|+-++++...+. ..++.+++.+...++ ++.+.+
T Consensus 513 ~R~~~gLp~~~v~f~~f--N~~---~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~ 586 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNF--NQL---YKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSP 586 (723)
T ss_dssp EGGGGTCCTTSEEEECC--SCG---GGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEE
T ss_pred chhhcCCCCCCEEEEeC--Ccc---ccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECC
Confidence 46788999887555544 443 346678888888888888999888877653 334556665555554 355554
Q ss_pred CCCcchHHHHHHHcccceehh----hHHHHHHHHcCCCEEEEEcCChHHHHHHH-hhccCCccchhhhhcCC
Q 016179 307 GGSSNLKYDAFSASRVALCTS----GTVAVELQLARLPCVVAYRAHFLTEWFIR-YKAKIPYISLPNILLDS 373 (394)
Q Consensus 307 g~~~~~~~~~~~~ADl~I~~S----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a~-~~vk~~~~~l~Nil~~~ 373 (394)
....++.-..++.+|+++=.- ||+|+|++.+|+|+|. .++..+...++- .+. .++|+.+|+..
T Consensus 587 ~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt-~~g~~~~sR~~~s~l~---~~gl~e~ia~~ 654 (723)
T 4gyw_A 587 VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVT-MPGETLASRVAASQLT---CLGCLELIAKN 654 (723)
T ss_dssp CCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEB-CCCSSGGGTHHHHHHH---HHTCGGGBCSS
T ss_pred CCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEE-ccCCCccHhHHHHHHH---HcCCcccccCC
Confidence 321345556788899998643 6777799999999774 565544433332 222 45666666543
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0055 Score=64.92 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=95.1
Q ss_pred HHhhhheeecCcccHHHHHh-cCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEEC
Q 016179 172 AAFVDHILCILPNEEAICRL-NGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLP 247 (394)
Q Consensus 172 ~~~~d~v~~~~p~~~~~~~~-~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illlg 247 (394)
.+..|.+++..+++.+.|.+ ++++ +..+|.|-.|.+..... ....++++++++++++++++||.+|
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~----------~~~~~~~~~~~~~~~~~kk~ILyaP 545 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRAN----------DQEYLDEIRTHLNLPSDKKVIMYAP 545 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTT----------CHHHHHHHHHHTTCCSSCEEEEECC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccc----------hHHHHHHHHHHhCCCCCCeEEEEee
Confidence 34568999999998887754 4664 77899998887642110 0012456788999999999999999
Q ss_pred CCcHHHH-Hh-----hHHHHHHHH-HHhhhhCCCeEEEEEeCCCcChHHHHHHHh--hcCCCCEEEecCCCcchHHHHHH
Q 016179 248 GSRLQEV-AR-----MLPIFAKTV-ELLKDSFPELITVIHVAPNRHVENYITGLI--QKWPVPSILVPGGSSNLKYDAFS 318 (394)
Q Consensus 248 GSrg~ei-~~-----~l~~ll~a~-~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~--~~~~~~v~~~~g~~~~~~~~~~~ 318 (394)
-=|+.+. .. .++.-++.+ +.+. ++..+++-.++. +.... ......+.-+.. ..++.++|.
T Consensus 546 T~r~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~~li~r~Hp~------~~~~~~~~~~~~~~~~~~~--~~di~~ll~ 614 (729)
T 3l7i_A 546 TWRDDEFVSKGKYLFELKIDLDNLYKELG---DDYVILLRMHYL------ISNALDLSGYENFAIDVSN--YNDVSELFL 614 (729)
T ss_dssp CCCGGGCCGGGSSCCCCTTCHHHHHHHHT---TTEEEEECCCHH------HHTTCCCTTCTTTEEECTT--CSCHHHHHH
T ss_pred eeeCCccccccccccchhhHHHHHHHHcC---CCeEEEEecCcc------hhccccccccCCcEEeCCC--CcCHHHHHH
Confidence 7665421 00 011111222 2232 356655543321 11111 111112333333 358999999
Q ss_pred HcccceehhhHHHHHHHHcCCCEEEE
Q 016179 319 ASRVALCTSGTVAVELQLARLPCVVA 344 (394)
Q Consensus 319 ~ADl~I~~SGt~tlEa~a~G~P~Iv~ 344 (394)
.||++||--..+..|.+++++|+|+.
T Consensus 615 ~aD~lITDySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 615 ISDCLITDYSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp TCSEEEESSCTHHHHHGGGCCCEEEE
T ss_pred HhCEEEeechHHHHhHHhhCCCEEEe
Confidence 99999999888888999999998863
|
| >3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=90.48 E-value=0.66 Score=40.42 Aligned_cols=39 Identities=15% Similarity=0.001 Sum_probs=25.3
Q ss_pred HHHHHHHcccceehhh-HHHH-HHH---H------cCCCEEEEEcCChHH
Q 016179 313 KYDAFSASRVALCTSG-TVAV-ELQ---L------ARLPCVVAYRAHFLT 351 (394)
Q Consensus 313 ~~~~~~~ADl~I~~SG-t~tl-Ea~---a------~G~P~Iv~y~~~~~~ 351 (394)
....+..||.+|+-+| ..|+ |+. . .++|++++...+..+
T Consensus 102 k~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~ 151 (189)
T 3sbx_A 102 KQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFD 151 (189)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTH
T ss_pred HHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccch
Confidence 3456789999999885 3565 554 2 489988753334333
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=85.78 E-value=4.8 Score=42.56 Aligned_cols=118 Identities=13% Similarity=0.074 Sum_probs=75.9
Q ss_pred HhhcCC--CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh--hC-----CCeEEEEEeCCCcChHHH------HHHHh
Q 016179 231 KNKYSV--PSGATVISLLPGSRLQEVARMLPIFAKTVELLKD--SF-----PELITVIHVAPNRHVENY------ITGLI 295 (394)
Q Consensus 231 r~~lgl--~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~--~~-----~~~~~vi~~g~~~~~~~~------l~~~~ 295 (394)
++++|+ +++.+++... +|-++.|+..=+++..+.++.+ .. .+.|||+.+-..+.++.. +.+..
T Consensus 505 ~~~~Gl~vdpd~l~~~~v--kRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va 582 (796)
T 2c4m_A 505 LERQGIEIDPESIFDVQI--KRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIA 582 (796)
T ss_dssp HHHHCCCCCTTSEEEEEE--CCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcEEEEe--ecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHH
Confidence 445565 4566777776 8888888753336777776653 22 258888777554444333 22222
Q ss_pred h------cCCC--CEEEecCCCcchHHHHHHHcccceehh-------hHHHHHHHHcCCCEEEEEcCChH
Q 016179 296 Q------KWPV--PSILVPGGSSNLKYDAFSASRVALCTS-------GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 296 ~------~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-------Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
. ..+. ++.++++|...-...++++||+.+..| ||+.+=+|..|.+.|-+.+...+
T Consensus 583 ~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanv 652 (796)
T 2c4m_A 583 DLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANV 652 (796)
T ss_dssp HHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHH
T ss_pred HHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEe
Confidence 2 2333 467777774444667899999988755 99999999999998855544443
|
| >3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=85.68 E-value=3 Score=36.49 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=38.8
Q ss_pred HHHHHHHcccceehhhH-HHH----HHHH------cCCCEEEEEcCChHHHHHH--HhhccCCccchhhhhcCCCCcccc
Q 016179 313 KYDAFSASRVALCTSGT-VAV----ELQL------ARLPCVVAYRAHFLTEWFI--RYKAKIPYISLPNILLDSPIIPEA 379 (394)
Q Consensus 313 ~~~~~~~ADl~I~~SGt-~tl----Ea~a------~G~P~Iv~y~~~~~~~~~a--~~~vk~~~~~l~Nil~~~~i~pEl 379 (394)
....+..||.+|+-+|+ .|+ |++. .++|+++....+..+.++. +.++...+++-.+ .++
T Consensus 111 k~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~--------~~~ 182 (199)
T 3qua_A 111 KREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRA--------MDS 182 (199)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHHHHHHHHHTTTTTSSCHHH--------HHT
T ss_pred HHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchHHHHHHHHHHHCCCCCHHH--------CCe
Confidence 33467899999998853 554 4444 3899887543343333332 3344444444221 133
Q ss_pred cCCCCCHHHHHHHh
Q 016179 380 LLQACTPDTLTHLL 393 (394)
Q Consensus 380 iq~~~~~~~i~~~~ 393 (394)
+.-.-+++.+.+.+
T Consensus 183 i~~~d~~~e~~~~l 196 (199)
T 3qua_A 183 LVVVDNVEAALEAC 196 (199)
T ss_dssp SEEESSHHHHHHHH
T ss_pred EEEeCCHHHHHHHH
Confidence 33344556555543
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=80.64 E-value=5.1 Score=42.35 Aligned_cols=118 Identities=14% Similarity=0.062 Sum_probs=74.7
Q ss_pred HhhcCCC--CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhh--hC-----CCeEEEEEeCCCcChHHH------HHHHh
Q 016179 231 KNKYSVP--SGATVISLLPGSRLQEVARMLPIFAKTVELLKD--SF-----PELITVIHVAPNRHVENY------ITGLI 295 (394)
Q Consensus 231 r~~lgl~--~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~--~~-----~~~~~vi~~g~~~~~~~~------l~~~~ 295 (394)
++++|++ ++.+++... +|-++.|+..=+++..+.++.+ .. .+.|||+.+-..+.++.. +.+..
T Consensus 515 ~~~~Gl~vdpd~l~~~~v--kRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va 592 (796)
T 1l5w_A 515 KVRTGIEINPQAIFDIQI--KRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVA 592 (796)
T ss_dssp HHHHCCCCCTTSEEEEEE--SCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCcCCCcceEeee--ecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHH
Confidence 4556664 566777666 8888888753335666666643 12 258888777554444333 22222
Q ss_pred h------cCCC--CEEEecCCCcchHHHHHHHcccceehh-------hHHHHHHHHcCCCEEEEEcCChH
Q 016179 296 Q------KWPV--PSILVPGGSSNLKYDAFSASRVALCTS-------GTVAVELQLARLPCVVAYRAHFL 350 (394)
Q Consensus 296 ~------~~~~--~v~~~~g~~~~~~~~~~~~ADl~I~~S-------Gt~tlEa~a~G~P~Iv~y~~~~~ 350 (394)
. ..+. ++.++++|...-...++++||+.+..| ||+.+=+|..|.+.|-+.+...+
T Consensus 593 ~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanv 662 (796)
T 1l5w_A 593 DVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV 662 (796)
T ss_dssp HHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred HHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeee
Confidence 2 2222 466677774344667899999988755 89999999999998855554443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 394 | |||
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.89 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.58 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.54 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 99.47 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.31 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.3 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.25 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.18 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.16 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.13 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 98.7 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 98.65 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.97 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.8 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.31 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.19 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 96.38 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 91.66 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 88.55 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.72 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 84.32 | |
| d2q4oa1 | 183 | Hypothetical protein At2g37210/T2N18.3 {Thale cres | 80.84 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 80.78 |
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=5.1e-22 Score=189.16 Aligned_cols=281 Identities=16% Similarity=0.186 Sum_probs=170.0
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecCh----hhHhccCcc-ccccCcceeccHHHhhhhHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGS----MMSEQGMKS-LFPMEDIAVMGIWELLPHIYKFRVRL 105 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~----~m~~~g~~~-~~~~~~l~~~G~~~~l~~~~~~~~~~ 105 (394)
|||+|+|||||||+. |.+|+++|++++.+ +.+++.++. -++..|++. ..+...+...+....+..+......+
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~e-V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQ-VRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAW 79 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCE-EEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCE-EEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHHHHHHHHHHhH
Confidence 689999999999999 88999999988764 777665421 123444432 12222222234445555566677778
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHH-HHHhhhheeecCcc
Q 016179 106 KETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKN-LAAFVDHILCILPN 184 (394)
Q Consensus 106 ~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~-l~~~~d~v~~~~p~ 184 (394)
.+...++++++||++++++. .+........+.+ ++|++.+ .+..| ++ ...+ ...+++.+....+.
T Consensus 80 ~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~a~~~------~ip~~~~--~~~~~---~~--~~~~~~~~~~~~~~~~~~~ 145 (351)
T d1f0ka_ 80 RQARAIMKAYKPDVVLGMGG-YVSGPGGLAAWSL------GIPVVLH--EQNGI---AG--LTNKWLAKIATKVMQAFPG 145 (351)
T ss_dssp HHHHHHHHHHCCSEEEECSS-TTHHHHHHHHHHT------TCCEEEE--ECSSS---CC--HHHHHHTTTCSEEEESSTT
T ss_pred HHHHHHhhccccceeeeccc-chhhhhhhhhhhc------ccceeec--ccccc---cc--hhHHHhhhhcceeeccccc
Confidence 88899999999999998852 1222222222222 7896443 33333 23 4433 34455555443321
Q ss_pred cHHHHHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHH-HHhhHHHHHH
Q 016179 185 EEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQE-VARMLPIFAK 263 (394)
Q Consensus 185 ~~~~~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~e-i~~~l~~ll~ 263 (394)
.......+|+|.+..+... .. .+.+.....+..++++++||+|+. +++ .+.+
T Consensus 146 -------~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~~~~~~~i~~~~gs~g~~~~~~---~~~~ 198 (351)
T d1f0ka_ 146 -------AFPNAEVVGNPVRTDVLAL---------------PL--PQQRLAGREGPVRVLVVGGSQGARILNQ---TMPQ 198 (351)
T ss_dssp -------SSSSCEECCCCCCHHHHTS---------------CC--HHHHHTTCCSSEEEEEECTTTCCHHHHH---HHHH
T ss_pred -------cccceeEEcCCcccccccc---------------hh--HHhhhhcccCCcccccccccchhhhhHH---HHHH
Confidence 1234678899998876531 11 123344556778899999999964 333 3445
Q ss_pred HHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH-HHHHcCCCEE
Q 016179 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV-ELQLARLPCV 342 (394)
Q Consensus 264 a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl-Ea~a~G~P~I 342 (394)
.+..+.. ....++.++. ................++.+.. | .++|.++|+.||++||++|+.|+ |++++|+|+|
T Consensus 199 ~~~~l~~---~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~v~~-f-~~~~~~lm~~adl~It~~G~~T~~Eal~~g~P~I 272 (351)
T d1f0ka_ 199 VAAKLGD---SVTIWHQSGK-GSQQSVEQAYAEAGQPQHKVTE-F-IDDMAAAYAWADVVVCRSGALTVSEIAAAGLPAL 272 (351)
T ss_dssp HHHHHGG---GEEEEEECCT-TCHHHHHHHHHHTTCTTSEEES-C-CSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEE
T ss_pred hhhhhcc---cceeeeeccc-cchhhhhhhhcccccccceeee-e-hhhHHHHHHhCchhhccccchHHHHHHHhCCcee
Confidence 5555543 2334444443 3333322222333344566664 4 58899999999999999998888 9999999999
Q ss_pred EEE-cCChHHHH-HHHhhcc
Q 016179 343 VAY-RAHFLTEW-FIRYKAK 360 (394)
Q Consensus 343 v~y-~~~~~~~~-~a~~~vk 360 (394)
++. +...-.+. -|+++.+
T Consensus 273 ~iP~~~~~~~Q~~NA~~l~~ 292 (351)
T d1f0ka_ 273 FVPFQHKDRQQYWNALPLEK 292 (351)
T ss_dssp ECCCCCTTCHHHHHHHHHHH
T ss_pred eeecccCCchHHHHHHHHHH
Confidence 863 22112222 2666654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.58 E-value=1.8e-13 Score=132.43 Aligned_cols=280 Identities=16% Similarity=0.082 Sum_probs=168.9
Q ss_pred CceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEE-EEecChhhH-------hccCccccccCcceeccHHHhhhhHHHHH
Q 016179 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSF-SGVGGSMMS-------EQGMKSLFPMEDIAVMGIWELLPHIYKFR 102 (394)
Q Consensus 31 ~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~-~g~gg~~m~-------~~g~~~~~~~~~l~~~G~~~~l~~~~~~~ 102 (394)
++||++++|..+-=...+.|+++|++. ++ +++ +.++|.+++ ..|++.... +.+..-...+ ...+.
T Consensus 2 MkkI~~v~GtR~e~~kl~pli~~l~~~-~~-~~~~li~tG~H~~~~~~~~~~~~i~~d~~---l~~~~~~~s~--~~~~~ 74 (373)
T d1v4va_ 2 MKRVVLAFGTRPEATKMAPVYLALRGI-PG-LKPLVLLTGQHREQLRQALSLFGIQEDRN---LDVMQERQAL--PDLAA 74 (373)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTS-TT-EEEEEEECSSCHHHHHHHHHTTTCCCSEE---CCCCSSCCCH--HHHHH
T ss_pred CCeEEEEEEhhHHHHHHHHHHHHHHhC-CC-CCEEEEEccCChhhhhCcchhcCCCcccc---CCCCCCCCCH--HHHHH
Confidence 578999999987777788899999763 43 553 344555432 223322111 1111000111 01133
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCc-cccccCc--chHHHH-HHHhhhhe
Q 016179 103 VRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPS-FWAWKGG--EARLKN-LAAFVDHI 178 (394)
Q Consensus 103 ~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~-~wa~~~g--~~r~~~-l~~~~d~v 178 (394)
+.+.++.+++.+.+||+|++.|-- +. .+|..+.... .++| ++|..... .+.+..+ +...+. +.+.+|..
T Consensus 75 ~~~~~~~~~l~~~kPD~vlv~GDr-~e-~la~a~aa~~----~~ip-i~HiegG~rsg~~~~~~~de~~R~~iskls~~h 147 (373)
T d1v4va_ 75 RILPQAARALKEMGADYVLVHGDT-LT-TFAVAWAAFL----EGIP-VGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLD 147 (373)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSC-HH-HHHHHHHHHH----TTCC-EEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHhhhhhhcCcccccccccC-cc-chhHHHHHHH----hhhh-heeecccccccccccCcchhhhhhhhcccccee
Confidence 456677888999999999988631 22 2222222221 1799 47864311 1111111 122322 58899999
Q ss_pred eecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHH
Q 016179 179 LCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVA 255 (394)
Q Consensus 179 ~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~ 255 (394)
||..+..++.+.+.|.+ +.+||+|+.|.+.... ...+.....+. .+.++++- .|....+
T Consensus 148 f~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~~----------------~~~~~~~~~~~-~~~~lvt~-hr~~n~~ 209 (373)
T d1v4va_ 148 FAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAA----------------KLGRLPEGLPE-GPYVTVTM-HRRENWP 209 (373)
T ss_dssp EESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHH----------------HHCCCCTTCCS-SCEEEECC-CCGGGGG
T ss_pred eecchhhhhhhhhhcccccceeecccchhhHHHhhh----------------hhccccccccc-ccceeEEe-ccccccc
Confidence 99999999999988875 7789999999875321 11111223333 34455442 4543222
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHHHHH
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQ 335 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tlEa~ 335 (394)
....+.+++..+.+...++.++++...+........+..... .++.++......++..+|..|+++|+-||+...||+
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~l~ll~~s~~vignSssgi~Ea~ 287 (373)
T d1v4va_ 210 -LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGA 287 (373)
T ss_dssp -GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHH
T ss_pred -hHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceeeccchHHHHHHHhhhceeEecccchhhhcch
Confidence 233455666667666778888888876533322222333332 367777544356788899999999999999999999
Q ss_pred HcCCCEEEE
Q 016179 336 LARLPCVVA 344 (394)
Q Consensus 336 a~G~P~Iv~ 344 (394)
.+|+|+|.+
T Consensus 288 ~lg~P~Ini 296 (373)
T d1v4va_ 288 ALGVPVVVL 296 (373)
T ss_dssp HTTCCEEEC
T ss_pred hhcCcEEEe
Confidence 999999976
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.54 E-value=1.6e-13 Score=132.87 Aligned_cols=284 Identities=15% Similarity=0.043 Sum_probs=158.1
Q ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhcCCC-CeEEEEecChh--hH-----hccCccccccCcceeccHHHhhhhHHHH
Q 016179 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPL-PVSFSGVGGSM--MS-----EQGMKSLFPMEDIAVMGIWELLPHIYKF 101 (394)
Q Consensus 30 ~~~kIlI~aG~~sGh~~a~~l~~~L~~~~~~-~~~~~g~gg~~--m~-----~~g~~~~~~~~~l~~~G~~~~l~~~~~~ 101 (394)
.+|||++++|..+.=..-+.|+++|++. ++ ++.++.. |.+ +. +-++...++ +.+.+-...+ ...+
T Consensus 1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~-~~~~~~li~t-G~H~~~~~~~~~~~~i~~~~~---~~~~~~~~~~--~~~~ 73 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEAIKMAPLVLELKKY-PEIDSYVTVT-AQHRQMLDQVLDAFHIKPDFD---LNIMKERQTL--AEIT 73 (377)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHGGGC-TTEEEEEEEC-CSCGGGTHHHHHHTTCCCSEE---CCCCCTTCCH--HHHH
T ss_pred CCceEEEEEEchHhHHHHHHHHHHHHhC-CCCCEEEEEe-CCCHHHHHHHHhhcCCCCcee---eecCCCCCCH--HHHH
Confidence 3689999998877666678899999774 33 1334444 454 21 112221111 2221111111 1124
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCcc---c--cccCcchHHHH-HHHhh
Q 016179 102 RVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSF---W--AWKGGEARLKN-LAAFV 175 (394)
Q Consensus 102 ~~~~~~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~---w--a~~~g~~r~~~-l~~~~ 175 (394)
-..+.++.+.+.+.+||+|++.|.- +.. +|..+.... .++| ++|...... | .++ +...+. +.+.+
T Consensus 74 ~~~i~~~~~~~~~~kpD~v~v~GDr-~e~-la~a~aa~~----~~Ip-i~HiegG~~s~~~~~~~~--de~~R~~iskls 144 (377)
T d1o6ca_ 74 SNALVRLDELFKDIKPDIVLVHGDT-TTT-FAGSLAAFY----HQIA-VGHVEAGLRTGNKYSPFP--EELNRQMTGAIA 144 (377)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTC-HHH-HHHHHHHHH----TTCE-EEEESCCCCCSCTTTTTT--HHHHHHHHHHHC
T ss_pred HHHHHhhhhhhhhcccceeEeeecc-ccc-chhhhhhhh----ccce-EEEEecccccccccccCc--hhhhccccccce
Confidence 4556777889999999999998732 222 222222221 1799 478644211 1 122 224443 58899
Q ss_pred hheeecCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHH
Q 016179 176 DHILCILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQ 252 (394)
Q Consensus 176 d~v~~~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ 252 (394)
|..||..+..++.+.+.|.+ +.+||+|..|.+..... +......+....+.+.++++ -.|..
T Consensus 145 ~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~--------------~~~~~~~~~~~~~~~~ilvt-~Hr~~ 209 (377)
T d1o6ca_ 145 DLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVR--------------DGYSHPVLDQVGEDKMILLT-AHRRE 209 (377)
T ss_dssp SEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCC--------------SSCCCSTTTTTTTSEEEEEC-C----
T ss_pred eEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHH--------------HHHhhhhhhhccCCceEEEE-ecccc
Confidence 99999999999999998875 78999999998754321 00000112222234445554 35554
Q ss_pred HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH
Q 016179 253 EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332 (394)
Q Consensus 253 ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl 332 (394)
.........+..+..+....++..++++..++......+.+.... ..++.++......++..+|..|+++|+-||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~i~ 288 (377)
T d1o6ca_ 210 NLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGD-SDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQE 288 (377)
T ss_dssp ------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--C-CSSEEECCCCCHHHHHHHHHHCSEEEEC--CHHH
T ss_pred ccccchHHHHHHHHhhcccccccccccccccccccchhhhhcccc-ccceEeccccchHHHHHHHhhhheeecccchhHH
Confidence 332222233344444444556788887776543222222222222 2357777543356788999999999999999999
Q ss_pred HHHHcCCCEEEEE
Q 016179 333 ELQLARLPCVVAY 345 (394)
Q Consensus 333 Ea~a~G~P~Iv~y 345 (394)
||+.+|+|+|.+.
T Consensus 289 Ea~~lg~P~Inir 301 (377)
T d1o6ca_ 289 EAPSLGKPVLVLR 301 (377)
T ss_dssp HGGGGTCCEEEEC
T ss_pred hhhhhhceEEEeC
Confidence 9999999999873
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=1.9e-12 Score=125.16 Aligned_cols=288 Identities=17% Similarity=0.124 Sum_probs=170.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCC-CeEEEEecChh--hHhccCccc--cccCcceeccHHHhhhhHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPL-PVSFSGVGGSM--MSEQGMKSL--FPMEDIAVMGIWELLPHIYKFRVRLK 106 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~-~~~~~g~gg~~--m~~~g~~~~--~~~~~l~~~G~~~~l~~~~~~~~~~~ 106 (394)
|||++++|..+.=...+.|+++|++. ++ ++.++. +|.+ +...+++.. .+...+.+.+-...+ ...+...+.
T Consensus 1 MKi~~v~GtR~e~~kl~pli~~l~~~-~~~~~~li~-tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 76 (376)
T d1f6da_ 1 MKVLTVFGTRPEAIKMAPLVHALAKD-PFFEAKVCV-TAQHREMLDQVLKLFSIVPDYDLNIMQPGQGL--TEITCRILE 76 (376)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHC-TTCEEEEEE-CCTTGGGGHHHHHHTTCCCSEECCCCSSSSCH--HHHHHHHHH
T ss_pred CeEEEEEEhhHhHHHHHHHHHHHHhC-CCCCEEEEE-cCCCHHHHHHHHHhcCCCCCcccccCCCCCCH--HHHHHHHHH
Confidence 79999998877766688899999874 33 233444 4554 322222111 011111111100111 011334456
Q ss_pred HHHHHHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecC----cc-ccccCcchHHHH-HHHhhhheee
Q 016179 107 ETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAP----SF-WAWKGGEARLKN-LAAFVDHILC 180 (394)
Q Consensus 107 ~~~~~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~----~~-wa~~~g~~r~~~-l~~~~d~v~~ 180 (394)
.+.+.+.+.+||+|++.| +-.-.+|..+.... .++| +.|.... .. +.+. +...+. +.+.+|..||
T Consensus 77 ~~~~~~~~~kPD~v~v~G--Dr~e~la~a~aa~~----~~ip-i~HiegG~~s~~~~~~~p--de~~R~~iskls~~hf~ 147 (376)
T d1f6da_ 77 GLKPILAEFKPDVVLVHG--DTTTTLATSLAAFY----QRIP-VGHVEAGLRTGDLYSPWP--EEANRTLTGHLAMYHFS 147 (376)
T ss_dssp HHHHHHHHHCCSEEEEET--TCHHHHHHHHHHHT----TTCC-EEEESCCCCCSCTTSSTT--HHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHhccCcceeeec--cccchhhHHHHHHh----hCce-EEEEecccccccccccCc--hhhhhhhhccceeEEEe
Confidence 677888999999999886 22223333333222 2799 4786431 11 1122 224433 5889999999
Q ss_pred cCcccHHHHHhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCCh-----HHHHhhcCCCCCCcEEEEECCCcHH
Q 016179 181 ILPNEEAICRLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNS-----EDFKNKYSVPSGATVISLLPGSRLQ 252 (394)
Q Consensus 181 ~~p~~~~~~~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~-----~~~r~~lgl~~~~~~IlllgGSrg~ 252 (394)
..+..++.+.+.|.+ +.+||+|..|.+..... ..... ........++.+.+.++++ -.|..
T Consensus 148 ~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ilvt-~H~~~ 216 (376)
T d1f6da_ 148 PTETSRQNLLRENVADSRIFITGNTVIDALLWVRD----------QVMSSDKLRSELAANYPFIDPDKKMILVT-GHRRE 216 (376)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHH----------HTTTCHHHHHHHHTTCTTCCTTSEEEEEC-CCCBS
T ss_pred ccHHHHhHHHhcCCCccccceecCchHHHHHHHHh----------hhhccchhhhhhhccccccCCCCceEEEe-cccch
Confidence 999999999998985 78999999987642210 00011 1111223344556666664 34443
Q ss_pred HHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehhhHHHH
Q 016179 253 EVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332 (394)
Q Consensus 253 ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~SGt~tl 332 (394)
..++.+..+..++..+.+...++.++++..+.........+.... ..++.+++.....+...++..|+++|+-||+...
T Consensus 217 ~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~~~~~l~~~~fl~ll~~a~~vignSssgi~ 295 (376)
T d1f6da_ 217 SFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQE 295 (376)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHHCSEEEESSSGGGG
T ss_pred hhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccceeeccccHHHHHHHHhhceEEEecCcchHh
Confidence 222334455666766666666788888876543222222222222 2367776543356788899999999999999999
Q ss_pred HHHHcCCCEEEE
Q 016179 333 ELQLARLPCVVA 344 (394)
Q Consensus 333 Ea~a~G~P~Iv~ 344 (394)
||..+|+|+|.+
T Consensus 296 Ea~~lg~P~Ini 307 (376)
T d1f6da_ 296 EAPSLGKPVLVM 307 (376)
T ss_dssp TGGGGTCCEEEC
T ss_pred hHHHhCCCEEEc
Confidence 999999999976
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.31 E-value=9.4e-11 Score=111.20 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=37.2
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecC--hhhHhccCcc
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGG--SMMSEQGMKS 79 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg--~~m~~~g~~~ 79 (394)
|||+|+++||.||++ .++|+++|++++++ +.|++.+. +..++.|++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~-V~~~~~~~~~~~v~~~g~~~ 50 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGAD-ARMCLPPDYVERCAEVGVPM 50 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCE-EEEEECGGGHHHHHHHTCCE
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCE-EEEEEChhhHhHHHHCCCeE
Confidence 899999999999999 99999999998875 77766443 2345667653
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.30 E-value=2.1e-10 Score=110.73 Aligned_cols=211 Identities=11% Similarity=0.061 Sum_probs=115.8
Q ss_pred HHHhhhheeecCcccHHH----HHhcCCCeEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEE
Q 016179 171 LAAFVDHILCILPNEEAI----CRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLL 246 (394)
Q Consensus 171 l~~~~d~v~~~~p~~~~~----~~~~g~~~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~Illl 246 (394)
..+.+|.+.+..+..... +.....++.++.|++............ . .+..+...++++++.+ .++|+.+
T Consensus 183 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~-~~~i~~~ 255 (437)
T d2bisa1 183 GGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTG----S--RDERKKSLLSKFGMDE-GVTFMFI 255 (437)
T ss_dssp HHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCS----C--HHHHHHHHHHHTTCCS-CEEEEEE
T ss_pred HHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccch----h--hHHHHHhhhhhhhccC-CceEEEe
Confidence 355678888777654432 222223466666655333211000000 0 0011345567788754 4666666
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhhh--hCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCC-cchHHHHHHHcccc
Q 016179 247 PGSRLQEVARMLPIFAKTVELLKD--SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGS-SNLKYDAFSASRVA 323 (394)
Q Consensus 247 gGSrg~ei~~~l~~ll~a~~~l~~--~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~-~~~~~~~~~~ADl~ 323 (394)
| +... .++....+++++..+.. ..+++++++++.+.......++......+ +..++.++. .+++..++++||++
T Consensus 256 G-~~~~-~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~adi~ 332 (437)
T d2bisa1 256 G-RFDR-GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFV 332 (437)
T ss_dssp S-CBCS-SSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCT-TEEEECSCCCHHHHHHHHTTCSEE
T ss_pred e-cccc-cchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccc-cceeccccCcHHHHHHHHhhhccc
Confidence 4 3321 12346678888888743 24689999887654333333333333333 444454433 56799999999999
Q ss_pred eehh-----hHHHHHHHHcCCCEEEEEcCChHHHHHHH---hhccC-Cccch----hhhhc-CCCCcc-------cccCC
Q 016179 324 LCTS-----GTVAVELQLARLPCVVAYRAHFLTEWFIR---YKAKI-PYISL----PNILL-DSPIIP-------EALLQ 382 (394)
Q Consensus 324 I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a~---~~vk~-~~~~l----~Nil~-~~~i~p-------Eliq~ 382 (394)
+..| |.+.+|++++|+|+|. .+.+.....+-. .++.. +.-.+ ..+|. +++... +..+
T Consensus 333 v~~s~~e~~~~~~~Eama~G~Pvi~-~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~- 410 (437)
T d2bisa1 333 IIPSYFEPFGLVALEAMCLGAIPIA-SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM- 410 (437)
T ss_dssp EECCSCCSSCHHHHHHHTTTCEEEE-ESCTTHHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHH-
T ss_pred cccccccccchHHHHHHHCCCCEEE-eCCCCcHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-
Confidence 9987 5565699999999775 666666654421 22321 11222 23454 344433 2333
Q ss_pred CCCHHHHHHHh
Q 016179 383 ACTPDTLTHLL 393 (394)
Q Consensus 383 ~~~~~~i~~~~ 393 (394)
.++++++++++
T Consensus 411 ~~s~~~~a~~~ 421 (437)
T d2bisa1 411 SFSWEKSAERY 421 (437)
T ss_dssp HSCHHHHHHHH
T ss_pred hCCHHHHHHHH
Confidence 47888888764
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.25 E-value=1.1e-10 Score=115.48 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=79.6
Q ss_pred HHHHhhcCCCCC-CcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEec
Q 016179 228 EDFKNKYSVPSG-ATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVP 306 (394)
Q Consensus 228 ~~~r~~lgl~~~-~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~ 306 (394)
...+.+.+++++ .++|+.+ +|-++.| ....++++++++.+. +.++++++.+.......+.+.....+.++.+..
T Consensus 278 ~~~~~~~~~~~~~~~~i~~v--grl~~~K-G~~~Ll~a~~~~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~ 352 (477)
T d1rzua_ 278 KAVAEHFRIDDDGSPLFCVI--SRLTWQK-GIDLMAEAVDEIVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAI 352 (477)
T ss_dssp HHHHHHHTCCCSSSCEEEEE--SCBSTTT-THHHHHTTHHHHHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEE
T ss_pred HHHHHhcccccCCccEEEEE--eeeeecC-CcHHHHHHHHHHHhh--CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEc
Confidence 345566777654 4566665 3444444 367888999887664 577777776543333333333444555777765
Q ss_pred CCCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHHH
Q 016179 307 GGSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTEW 353 (394)
Q Consensus 307 g~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~~ 353 (394)
++..+....+|++||++|..| |.+.+|||++|+|+|. .+.+++...
T Consensus 353 ~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVa-s~~GG~~E~ 403 (477)
T d1rzua_ 353 GYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVV-ARTGGLADT 403 (477)
T ss_dssp SCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEE-ESSHHHHHH
T ss_pred ccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEE-cCCCCCcce
Confidence 543345667899999999999 8888999999999885 666555443
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.18 E-value=3.2e-10 Score=107.82 Aligned_cols=106 Identities=9% Similarity=0.015 Sum_probs=61.9
Q ss_pred CCCcEEEEECCCcHHH-HHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 238 SGATVISLLPGSRLQE-VARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 238 ~~~~~IlllgGSrg~e-i~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
.+.++|++..||.... .......+++++.. .+. .+++..+.+.. . ......++++... . +..++
T Consensus 235 ~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~--~-----~~~~~~~v~~~~~-~--p~~~l 299 (401)
T d1rrva_ 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRA----QGR-RVILSRGWTEL--V-----LPDDRDDCFAIDE-V--NFQAL 299 (401)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHH----TTC-CEEEECTTTTC--C-----CSCCCTTEEEESS-C--CHHHH
T ss_pred cCCCeEEEECCccccCCHHHHHHHHHHHHhh----cCC-eEEEecccccc--c-----cccCCCCEEEEec-c--CcHHH
Confidence 4456777777776642 22223333333322 233 33444443211 0 1122336777643 2 57889
Q ss_pred HHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 317 FSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 317 ~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
+..+|++|+-+|..|+ ||+++|+|+|++ +...--+..++++.
T Consensus 300 l~~~~~~I~hgG~~t~~Eal~~GvP~l~~-P~~~DQ~~na~~v~ 342 (401)
T d1rrva_ 300 FRRVAAVIHHGSAGTEHVATRAGVPQLVI-PRNTDQPYFAGRVA 342 (401)
T ss_dssp GGGSSEEEECCCHHHHHHHHHHTCCEEEC-CCSBTHHHHHHHHH
T ss_pred hhhccEEEecCCchHHHHHHHhCCCEEEe-cccccHHHHHHHHH
Confidence 9999999999998887 999999999875 44443333355554
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=4.5e-10 Score=104.95 Aligned_cols=164 Identities=12% Similarity=0.114 Sum_probs=104.9
Q ss_pred hhhheeecCcccHHHH-HhcCCC---eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCC
Q 016179 174 FVDHILCILPNEEAIC-RLNGLA---ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS 249 (394)
Q Consensus 174 ~~d~v~~~~p~~~~~~-~~~g~~---~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGS 249 (394)
..+.+++..+...+.+ ...+.+ +.++-|.+......... .+.+++..|..+|++++.++++.+| .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~----------~~~~~~~~r~~~~~~~~~~~i~~~g-r 203 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQ----------IPNSREIYRQKNGIKEQQNLLLQVG-S 203 (370)
T ss_dssp CCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGS----------CTTHHHHHHHHTTCCTTCEEEEEEC-S
T ss_pred cCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccC----------chhhhhhhhhccCCCccceEEEEEe-c
Confidence 3567777777665544 444544 44555544332211110 1234677888999999888777764 3
Q ss_pred cHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCC--CCEEEecCCCcchHHHHHHHcccceehh
Q 016179 250 RLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWP--VPSILVPGGSSNLKYDAFSASRVALCTS 327 (394)
Q Consensus 250 rg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ADl~I~~S 327 (394)
.. . .+.+..++++++.+.++.++..+++++++... +.+++..++.+ .++++.. + .+++.++|+.||++|..|
T Consensus 204 ~~-~-~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~--~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~~adv~v~ps 277 (370)
T d2iw1a1 204 DF-G-RKGVDRSIEALASLPESLRHNTLLFVVGQDKP--RKFEALAEKLGVRSNVHFFS-G-RNDVSELMAAADLLLHPA 277 (370)
T ss_dssp CT-T-TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC--HHHHHHHHHHTCGGGEEEES-C-CSCHHHHHHHCSEEEECC
T ss_pred cc-c-ccchhhhcccccccccccccceeeeccccccc--cccccccccccccccccccc-c-cccccccccccccccccc
Confidence 32 2 23467888999988776666666666654332 23444443322 2466664 3 578999999999999987
Q ss_pred -----hHHHHHHHHcCCCEEEEEcCChHHHHHH
Q 016179 328 -----GTVAVELQLARLPCVVAYRAHFLTEWFI 355 (394)
Q Consensus 328 -----Gt~tlEa~a~G~P~Iv~y~~~~~~~~~a 355 (394)
|.+.+||+++|+|+|+ .+.+.+...+.
T Consensus 278 ~~E~~~~~~~EAma~G~PvI~-s~~~g~~e~i~ 309 (370)
T d2iw1a1 278 YQEAAGIVLLEAITAGLPVLT-TAVCGYAHYIA 309 (370)
T ss_dssp SCCSSCHHHHHHHHHTCCEEE-ETTSTTTHHHH
T ss_pred ccccccceeeecccCCeeEEE-eCCCChHHHhc
Confidence 5666799999999876 67776666664
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.13 E-value=7.8e-10 Score=104.60 Aligned_cols=104 Identities=11% Similarity=0.007 Sum_probs=60.7
Q ss_pred CCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHHHH
Q 016179 239 GATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFS 318 (394)
Q Consensus 239 ~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 318 (394)
+.+++.+..|+.... ...+..+.++++.. +..+++..+..... ....+.++++.+ + . +..++|.
T Consensus 237 ~~~~i~~~~~~~~~~-~~~~~~~~~al~~~-----~~~~~~~~~~~~~~-------~~~~~~nv~~~~-~-~-p~~~~l~ 300 (401)
T d1iira_ 237 GPPPVYLGFGSLGAP-ADAVRVAIDAIRAH-----GRRVILSRGWADLV-------LPDDGADCFAIG-E-V-NHQVLFG 300 (401)
T ss_dssp SSCCEEEECC---CC-HHHHHHHHHHHHHT-----TCCEEECTTCTTCC-------CSSCGGGEEECS-S-C-CHHHHGG
T ss_pred CCCeEEEccCccccc-hHHHHHHHHHHHHc-----CCeEEEeccCCccc-------cccCCCCEEEEe-c-c-CHHHHHh
Confidence 445677766665531 12233444444432 34455555542210 111223577664 3 2 5788999
Q ss_pred HcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 319 ASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 319 ~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.+|++|+.+|..|+ |++++|+|+|++ +...-.+..|+++.
T Consensus 301 ~~~~~V~hgG~~t~~Eal~~GvP~v~~-P~~~DQ~~na~~l~ 341 (401)
T d1iira_ 301 RVAAVIHHGGAGTTHVAARAGAPQILL-PQMADQPYYAGRVA 341 (401)
T ss_dssp GSSEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHH
T ss_pred hcCEEEecCCchHHHHHHHhCCCEEEc-cccccHHHHHHHHH
Confidence 99999999999888 999999999975 55443333466665
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=98.70 E-value=2e-08 Score=87.01 Aligned_cols=121 Identities=13% Similarity=0.163 Sum_probs=80.2
Q ss_pred hHHHHhhcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhh--CCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEE
Q 016179 227 SEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS--FPELITVIHVAPNRHVENYITGLIQKWPVPSIL 304 (394)
Q Consensus 227 ~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~--~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~ 304 (394)
+..+++++|++ +.+++++.| ... +-.+.+..++++++.+.++ .+++++++++.+....+...+.....+. +..+
T Consensus 20 ~~~~~~~~~l~-~~~~il~~G-rl~-~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~-~~~~ 95 (196)
T d2bfwa1 20 KKSLLSKFGMD-EGVTFMFIG-RFD-RGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKV 95 (196)
T ss_dssp HHHHHHHTTCC-SCEEEEEES-CBC-SSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEE
T ss_pred HHHHHHHhCCC-CCCEEEEEc-CCC-ccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchhhhhhhhhhccc-eeEE
Confidence 45678899995 556666654 222 1123466788999988543 4679999887654444444444333443 4444
Q ss_pred ecCCC-cchHHHHHHHcccceehh-----hHHHHHHHHcCCCEEEEEcCChHHH
Q 016179 305 VPGGS-SNLKYDAFSASRVALCTS-----GTVAVELQLARLPCVVAYRAHFLTE 352 (394)
Q Consensus 305 ~~g~~-~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~Iv~y~~~~~~~ 352 (394)
+.+.. .+++..+|+.||++|..| |.+.+||++||+|+|+ ...++...
T Consensus 96 ~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~-~~~~~~~e 148 (196)
T d2bfwa1 96 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA-SAVGGLRD 148 (196)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE-ESCHHHHH
T ss_pred eeeccccccchhccccccccccccccccccccchhhhhcCceeee-cCCCccce
Confidence 54443 457999999999999866 6777899999999886 56655544
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=3.6e-07 Score=85.37 Aligned_cols=275 Identities=12% Similarity=0.101 Sum_probs=138.0
Q ss_pred ceEEEEeCCchHHHH-HHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSI-GSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIE 110 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~-a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~ 110 (394)
|||||+--+.=||+. +..++++|++.+|+ .++..++++...+. ++..-...++-........+.+ ....++.+
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~-~~I~~l~~~~~~~l-~~~~p~id~v~~~~~~~~~~~~----~~~~~l~~ 74 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQ-AIIDVMAPAWCRPL-LSRMPEVNEAIPMPLGHGALEI----GERRKLGH 74 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTT-CEEEEEECGGGHHH-HTTCTTEEEEEEC-------CH----HHHHHHHH
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCC-CEEEEEEChhHHHH-HhhCCCcCEEEEecCccccchh----hhhhhHHH
Confidence 899999988899998 88899999999996 88777666544321 1110000111111111111111 22334566
Q ss_pred HHHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCeEEEeecCccccccCcchHHHHHHHhhhheee-cCcccHHHH
Q 016179 111 AALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILC-ILPNEEAIC 189 (394)
Q Consensus 111 ~i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~~~~yv~~~~wa~~~g~~r~~~l~~~~d~v~~-~~p~~~~~~ 189 (394)
.+++.++|+++.... .+...+...+. +++..+.+.....+.+... .+.... ........+
T Consensus 75 ~l~~~~~D~~i~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 135 (348)
T d1pswa_ 75 SLREKRYDRAYVLPN-SFKSALVPLFA--------GIPHRTGWRGEMRYGLLND----------VRVLDKEAWPLMVERY 135 (348)
T ss_dssp HTTTTTCSEEEECSC-CSGGGHHHHHT--------TCSEEEEECTTTCTTTCTE----------EECCCTTTCCSHHHHH
T ss_pred HhhhcccceEeeccc-ccchhhHHHhh--------ccccccccccccccccccc----------ccccccccchhHHHHH
Confidence 677889999997743 33333333332 4454333311110000000 000000 000001111
Q ss_pred HhcCCC------eEEEcCCCchhhhhhcCCCCCCCcccccCCChHHHHhhcCCCCCCcEEEEECCCcHHHHHhh-HHHHH
Q 016179 190 RLNGLA------ATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARM-LPIFA 262 (394)
Q Consensus 190 ~~~g~~------~~~vG~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lgl~~~~~~IlllgGSrg~ei~~~-l~~ll 262 (394)
...... ......|....... + .+.++....+++++..+++.|++.+|+.+.+.++- ...+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~ 203 (348)
T d1pswa_ 136 IALAYDKGIMRTAQDLPQPLLWPQLQ-----------V-SEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYA 203 (348)
T ss_dssp HHTTSCGGGCSSGGGSCSSCCCCCCC-----------C-CHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHH
T ss_pred HHHHHhhhcccccccccccccccccc-----------C-CHHHHHHHHHHhccccCCCeEEeccccchhhccccchHHHh
Confidence 000000 00001110000000 0 00123345567888888999999998765433321 23466
Q ss_pred HHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcC----CCCEEEecCCC-cchHHHHHHHcccceehhhHHHHHHHHc
Q 016179 263 KTVELLKDSFPELITVIHVAPNRHVENYITGLIQKW----PVPSILVPGGS-SNLKYDAFSASRVALCTSGTVAVELQLA 337 (394)
Q Consensus 263 ~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~----~~~v~~~~g~~-~~~~~~~~~~ADl~I~~SGt~tlEa~a~ 337 (394)
+.++.|.++ +.++++.+++++ .+..++..... ...+.-+.|.. ..+...+++.||++|+..++..=-|+++
T Consensus 204 ~L~~~l~~~--~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dtg~~HlAaa~ 279 (348)
T d1pswa_ 204 ELAKQLIDE--GYQVVLFGSAKD--HEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAAL 279 (348)
T ss_dssp HHHHHHHHT--TCEEEECCCGGG--HHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHHHHHT
T ss_pred hhHHHHhhc--CCccccccccch--HHHHHHHHHhhhcccccccccccCCccHHHHHHHHhcceeEeecCccHHHHHHHc
Confidence 677777664 567777766532 23233322211 11233232321 4577889999999999988777679999
Q ss_pred CCCEEEEEcC
Q 016179 338 RLPCVVAYRA 347 (394)
Q Consensus 338 G~P~Iv~y~~ 347 (394)
|+|+|.+|-.
T Consensus 280 g~p~i~lfg~ 289 (348)
T d1pswa_ 280 NRPLVALYGP 289 (348)
T ss_dssp TCCEEEEESS
T ss_pred CCCEEEEECC
Confidence 9999998843
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.97 E-value=0.00024 Score=67.32 Aligned_cols=113 Identities=11% Similarity=0.055 Sum_probs=64.9
Q ss_pred CCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChHHHHHHHhhcCCCCEEEecCCCcchHHHH
Q 016179 237 PSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316 (394)
Q Consensus 237 ~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 316 (394)
.+..++|.+..||....-...+..++++++.+ +.++++....... ...-.........++.+.... ...++
T Consensus 262 ~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~-----~~~vl~~~~~~~~-~~l~~~~~~~~~~nv~~~~~~---pq~~l 332 (450)
T d2c1xa1 262 RKPTSVVYISFGTVTTPPPAEVVALSEALEAS-----RVPFIWSLRDKAR-VHLPEGFLEKTRGYGMVVPWA---PQAEV 332 (450)
T ss_dssp SCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH-----TCCEEEECCGGGG-GGSCTTHHHHHTTTEEEESCC---CHHHH
T ss_pred CCccceeeecccccccCCHHHHHHHHHHHHhc-----CCeEEEEECCCcc-ccCChhhhhhccccccccccC---ChHhh
Confidence 35567888888887542122233344444443 3456766553211 110001111112356665431 34566
Q ss_pred H--HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 317 F--SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 317 ~--~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
+ ..+|++|+=.|..|. ||+..|+|+|++ +...--+..|+++.
T Consensus 333 L~hp~~~~fItHGG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rv~ 377 (450)
T d2c1xa1 333 LAHEAVGAFVTHCGWNSLWESVAGGVPLICR-PFFGDQRLNGRMVE 377 (450)
T ss_dssp HTSTTEEEEEECCCHHHHHHHHHHTCCEEEC-CCSTTHHHHHHHHH
T ss_pred hccCceeEEEccCCccHHHHHHHcCCCEEec-ccccchHHHHHHHH
Confidence 6 688999999999887 999999999974 55554444566654
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.80 E-value=6.2e-05 Score=62.42 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHhhhhCCCeEEEEEeCCC--cChHHHHHHHhhcCCCCEEEecCCCcchHHHHHHHcccceehh-----h
Q 016179 256 RMLPIFAKTVELLKDSFPELITVIHVAPN--RHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS-----G 328 (394)
Q Consensus 256 ~~l~~ll~a~~~l~~~~~~~~~vi~~g~~--~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ADl~I~~S-----G 328 (394)
+....++++++.+ ++.++++++... ...+...++.......+++++.....+++.++|+.||++|..| |
T Consensus 25 K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~ 100 (166)
T d2f9fa1 25 KRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFG 100 (166)
T ss_dssp GTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSC
T ss_pred cCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccccccccccc
Confidence 3467888888776 456666665322 2233332322222233688774322467999999999999988 5
Q ss_pred HHHHHHHHcCCCEEEEEcCChHHHHH
Q 016179 329 TVAVELQLARLPCVVAYRAHFLTEWF 354 (394)
Q Consensus 329 t~tlEa~a~G~P~Iv~y~~~~~~~~~ 354 (394)
.+.+|++++|+|+|+ .+.+....++
T Consensus 101 ~~~~Ea~~~g~pvi~-s~~~~~~e~i 125 (166)
T d2f9fa1 101 LTPIEAMASGKPVIA-VNEGGFKETV 125 (166)
T ss_dssp HHHHHHHHTTCCEEE-ESSHHHHHHC
T ss_pred cccccccccccccee-ecCCcceeee
Confidence 566799999999885 6766655543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.31 E-value=0.018 Score=53.66 Aligned_cols=115 Identities=11% Similarity=0.021 Sum_probs=66.8
Q ss_pred CCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcChH---HHHHHHhhcCCCCEEEecCCCcch
Q 016179 236 VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVE---NYITGLIQKWPVPSILVPGGSSNL 312 (394)
Q Consensus 236 l~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~~~---~~l~~~~~~~~~~v~~~~g~~~~~ 312 (394)
-.....++++..||.+..-......+.++++.+ ..++++..+...... ..-.+.....+.++.+.... .
T Consensus 284 ~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~---P 355 (473)
T d2pq6a1 284 SKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC-----KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWC---P 355 (473)
T ss_dssp TSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT-----TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCC---C
T ss_pred hcCCCceeeeccCccccccHHHHHHHHHHHHhc-----CCeEEEEEccCCcccccccCcccchhhccCceEEeeeC---C
Confidence 334566788888887642112233444444443 356777665322110 00011111123367766431 3
Q ss_pred HHHHH--HHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 313 KYDAF--SASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 313 ~~~~~--~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
..+++ ..++++|+=.|..|+ ||+..|+|||+ .+...--+..|++++
T Consensus 356 q~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv-~P~~~DQ~~na~rv~ 404 (473)
T d2pq6a1 356 QDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLC-WPFFADQPTDCRFIC 404 (473)
T ss_dssp HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE-CCCSTTHHHHHHHHH
T ss_pred HHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEe-ccchhhhHHHHHHHH
Confidence 45677 688999999999887 99999999997 465554445566654
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.19 E-value=0.0027 Score=59.49 Aligned_cols=43 Identities=12% Similarity=-0.036 Sum_probs=34.2
Q ss_pred HHHHcccceehhhHHHH-HHHHcCCCEEEEEcCChHHHHHHHhhc
Q 016179 316 AFSASRVALCTSGTVAV-ELQLARLPCVVAYRAHFLTEWFIRYKA 359 (394)
Q Consensus 316 ~~~~ADl~I~~SGt~tl-Ea~a~G~P~Iv~y~~~~~~~~~a~~~v 359 (394)
.+..+|++|+=.|..|+ ||+.+|+|||+ .+...--...|++++
T Consensus 345 ~~p~~~~fItHGG~gs~~eAl~~GVP~l~-~P~~~DQ~~nA~rlv 388 (461)
T d2acva1 345 AHKAIGGFVSHCGWNSILESMWFGVPILT-WPIYAEQQLNAFRLV 388 (461)
T ss_dssp HSTTEEEEEECCCHHHHHHHHHTTCCEEE-CCCSTTHHHHHHHHH
T ss_pred hcccCCEEEecCCccHHHHHHHcCCCEEe-CCcccchHHHHHHHH
Confidence 44799999999999887 99999999997 455555555577665
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=96.38 E-value=0.0059 Score=58.68 Aligned_cols=111 Identities=21% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCC----eEEEEEeCCCcC-hH------HHHHHHh-------hcCC
Q 016179 238 SGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE----LITVIHVAPNRH-VE------NYITGLI-------QKWP 299 (394)
Q Consensus 238 ~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~----~~~vi~~g~~~~-~~------~~l~~~~-------~~~~ 299 (394)
.++++|+-+ +|-...| .++.+++|++++.+++|+ +.++.++.+... .. ..+.+.. ...+
T Consensus 252 ~~~~~il~V--~Rld~~K-Gi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~ 328 (456)
T d1uqta_ 252 KNVQNIFSV--ERLDYSK-GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLG 328 (456)
T ss_dssp TTCEEEEEE--CCBCGGG-CHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTT
T ss_pred CCCeEEEEe--CCCchhh-chHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 466666665 4665444 478899999999887775 456666554321 11 1111111 1111
Q ss_pred C-CEEEecC-CCcchHHHHHHHcccceehh-----hHHHHHHHHcCCCE----EEEEcCChHH
Q 016179 300 V-PSILVPG-GSSNLKYDAFSASRVALCTS-----GTVAVELQLARLPC----VVAYRAHFLT 351 (394)
Q Consensus 300 ~-~v~~~~g-~~~~~~~~~~~~ADl~I~~S-----Gt~tlEa~a~G~P~----Iv~y~~~~~~ 351 (394)
. .+..+.+ ...+++..+|+.||+++..| |.+.+|+++||+|. +|+.+.++..
T Consensus 329 ~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~ 391 (456)
T d1uqta_ 329 WTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 391 (456)
T ss_dssp BCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG
T ss_pred CCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH
Confidence 1 2333322 22578999999999999998 77888999999992 4445555443
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=91.66 E-value=0.84 Score=33.83 Aligned_cols=89 Identities=15% Similarity=0.056 Sum_probs=53.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHHHHhcCCCCeEEEEecChhhHhccCccccccCcceeccHHHhhhhHHHHHHHHHHHHHH
Q 016179 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEA 111 (394)
Q Consensus 32 ~kIlI~aG~~sGh~~a~~l~~~L~~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~~~G~~~~l~~~~~~~~~~~~~~~~ 111 (394)
|||.|.=.|-|| ..+.++|+++.|+ .+++.+|.. +.++.. .-+ .+. +.+...++.+.
T Consensus 1 mkIgifDSGiGG----LtVl~~l~~~lP~-~~~iY~~D~----a~~PYG----~ks----~~~------I~~~~~~~~~~ 57 (105)
T d1b74a1 1 MKIGIFDSGVGG----LTVLKAIRNRYRK-VDIVYLGDT----ARVPYG----IRS----KDT------IIRYSLECAGF 57 (105)
T ss_dssp CEEEEEESSSTH----HHHHHHHHHHSSS-CEEEEEECG----GGCCGG----GSC----HHH------HHHHHHHHHHH
T ss_pred CEEEEEeCCCCH----HHHHHHHHHHCCC-CCEEEEecC----CCCCCC----CCC----HHH------HHHHHHHHHHH
Confidence 678877777666 5678888888896 888888742 112211 110 111 33445567788
Q ss_pred HHhcCCCEEEEeCCCCchHHHHHHHHHhccccCCCCCe
Q 016179 112 ALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149 (394)
Q Consensus 112 i~~~~PD~Vi~~~~~~f~~~la~~l~~~~~~~~~~ip~ 149 (394)
+.+.++|++|. -+-..+......|++++ .+|+
T Consensus 58 l~~~~~~~iVi-ACNTaS~~al~~lr~~~-----~~Pi 89 (105)
T d1b74a1 58 LKDKGVDIIVV-ACNTASAYALERLKKEI-----NVPV 89 (105)
T ss_dssp HHTTTCSEEEE-CCHHHHHHHHHHHHHHS-----SSCE
T ss_pred HHHcCCCEEEE-ecCcHHHHHHHHHHHHC-----CCCE
Confidence 88999998875 33122334444566553 6784
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=88.55 E-value=0.92 Score=36.93 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=38.1
Q ss_pred HHHHHHHcccceehhhH-HHH----HHHHcC------CCEEEEEcCChHHHHHH--HhhccCCccchhhhhcCCCCcccc
Q 016179 313 KYDAFSASRVALCTSGT-VAV----ELQLAR------LPCVVAYRAHFLTEWFI--RYKAKIPYISLPNILLDSPIIPEA 379 (394)
Q Consensus 313 ~~~~~~~ADl~I~~SGt-~tl----Ea~a~G------~P~Iv~y~~~~~~~~~a--~~~vk~~~~~l~Nil~~~~i~pEl 379 (394)
....+..||.+|+-+|+ .|+ |++... +|+|++...+..+.++. +.+++..+++- -..++
T Consensus 91 k~~m~~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l~~~~~~gfi~~--------~~~~~ 162 (179)
T d1t35a_ 91 KAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNE--------SHLKL 162 (179)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCT--------THHHH
T ss_pred HHHHHHhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHHHHHHHcCCCCh--------HHhCc
Confidence 44566789999999953 554 555443 79886433333332221 22333333221 12244
Q ss_pred cCCCCCHHHHHHHh
Q 016179 380 LLQACTPDTLTHLL 393 (394)
Q Consensus 380 iq~~~~~~~i~~~~ 393 (394)
+.-.-+++.+.+.+
T Consensus 163 i~~~~~~~e~i~~L 176 (179)
T d1t35a_ 163 IHSSSRPDELIEQM 176 (179)
T ss_dssp EEEESSHHHHHHHH
T ss_pred EEEeCCHHHHHHHH
Confidence 55455677766654
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=84.32 E-value=5.7 Score=31.57 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=24.1
Q ss_pred HHHHHHHcccceehhh-HHH---H-HHHHcCCCEEEE
Q 016179 313 KYDAFSASRVALCTSG-TVA---V-ELQLARLPCVVA 344 (394)
Q Consensus 313 ~~~~~~~ADl~I~~SG-t~t---l-Ea~a~G~P~Iv~ 344 (394)
...++..||.+|+.+| ..| + |+...++|+|++
T Consensus 90 k~~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiill 126 (170)
T d1rcua_ 90 SFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILL 126 (170)
T ss_dssp HHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhhcccceeeeccccchHHHHHHHHHhCCceEEe
Confidence 3456789999999985 233 2 788899998764
|
| >d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At2g37210/T2N18.3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.84 E-value=3.4 Score=33.48 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=22.8
Q ss_pred hHHHHHHHcccceehhh-HHHH-HH---H------HcCCCEEEEE
Q 016179 312 LKYDAFSASRVALCTSG-TVAV-EL---Q------LARLPCVVAY 345 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~SG-t~tl-Ea---~------a~G~P~Iv~y 345 (394)
....++..||.+|+-+| ..|+ |+ . ...+|+|++.
T Consensus 95 Rk~~m~~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiiln 139 (183)
T d2q4oa1 95 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 139 (183)
T ss_dssp HHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEEC
T ss_pred HHHHHHHhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEee
Confidence 34557888999999995 3555 44 3 2368977654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=80.78 E-value=2.6 Score=34.04 Aligned_cols=86 Identities=9% Similarity=0.112 Sum_probs=45.6
Q ss_pred hcCCCCCCcEEEEECCCcHHHHHhhHHHHHHHHHHhhhhCCCeEEEEEeCCCcC-hHHHHHHHhhcCCCCEEEecCCCcc
Q 016179 233 KYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRH-VENYITGLIQKWPVPSILVPGGSSN 311 (394)
Q Consensus 233 ~lgl~~~~~~IlllgGSrg~ei~~~l~~ll~a~~~l~~~~~~~~~vi~~g~~~~-~~~~l~~~~~~~~~~v~~~~g~~~~ 311 (394)
..+.+=..++++++|||.| +-+ ..++.|.+. ..++++ ++.+.+ .++..++........+....-...+
T Consensus 16 ~~~~~l~gK~vlItGasgG--IG~------~ia~~la~~--G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 84 (191)
T d1luaa1 16 AAGGSVKGKKAVVLAGTGP--VGM------RSAALLAGE--GAEVVL-CGRKLDKAQAAADSVNKRFKVNVTAAETADDA 84 (191)
T ss_dssp HTTSCCTTCEEEEETTTSH--HHH------HHHHHHHHT--TCEEEE-EESSHHHHHHHHHHHHHHHTCCCEEEECCSHH
T ss_pred HcCCCCCCCEEEEECCCHH--HHH------HHHHHHHhh--ccchhh-cccchHHHHHHHHHHHhccchhhhhhhcccHH
Confidence 3444445678999999999 322 123344442 466554 454432 2222222212122222222211135
Q ss_pred hHHHHHHHcccceehhhH
Q 016179 312 LKYDAFSASRVALCTSGT 329 (394)
Q Consensus 312 ~~~~~~~~ADl~I~~SGt 329 (394)
++.+++..+|++|..+|.
T Consensus 85 ~~~~~~~~iDilin~Ag~ 102 (191)
T d1luaa1 85 SRAEAVKGAHFVFTAGAI 102 (191)
T ss_dssp HHHHHTTTCSEEEECCCT
T ss_pred HHHHHhcCcCeeeecCcc
Confidence 788889999999998874
|