Citrus Sinensis ID: 016270
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 392 | ||||||
| 225424663 | 393 | PREDICTED: beta-1,4-mannosyl-glycoprotei | 0.989 | 0.987 | 0.884 | 0.0 | |
| 296081354 | 671 | unnamed protein product [Vitis vinifera] | 0.989 | 0.578 | 0.884 | 0.0 | |
| 224102421 | 388 | predicted protein [Populus trichocarpa] | 0.989 | 1.0 | 0.868 | 0.0 | |
| 224110872 | 390 | predicted protein [Populus trichocarpa] | 0.994 | 1.0 | 0.851 | 0.0 | |
| 30683061 | 392 | beta-1,4-mannosyl-glycoprotein [Arabidop | 0.994 | 0.994 | 0.838 | 0.0 | |
| 356567593 | 392 | PREDICTED: beta-1,4-mannosyl-glycoprotei | 0.994 | 0.994 | 0.843 | 0.0 | |
| 297844196 | 392 | glycosyl transferase family 17 protein [ | 0.994 | 0.994 | 0.841 | 0.0 | |
| 110742117 | 392 | beta-1,4-N-acetylglucosaminyltransferase | 0.994 | 0.994 | 0.835 | 0.0 | |
| 356540247 | 392 | PREDICTED: beta-1,4-mannosyl-glycoprotei | 0.994 | 0.994 | 0.835 | 0.0 | |
| 356512672 | 391 | PREDICTED: beta-1,4-mannosyl-glycoprotei | 0.994 | 0.997 | 0.825 | 0.0 |
| >gi|225424663|ref|XP_002285541.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/388 (88%), Positives = 373/388 (96%)
Query: 3 WMMTNEGGHYCSKKSDDICGNVCGQESNRGLSMSRIRCIMRGLDLKTYIFLFALVPTCVF 62
+M+ +EG HYCSKK+DDICG+VCGQES+R LSMSR+RCI+RGLD KTYIFLF LVPTC F
Sbjct: 2 FMLGSEGDHYCSKKTDDICGDVCGQESSRALSMSRLRCILRGLDFKTYIFLFVLVPTCFF 61
Query: 63 GIYVHGQKISYFLRPLWESPPKPFHEIPHYYHENVSMERLCKLHGWGIREYPRRVYDAVL 122
GIYVHGQKISYFLRPLWESPPKPFH+I HYY ENV+ME LCKLHGWGIREYPRRV+DAVL
Sbjct: 62 GIYVHGQKISYFLRPLWESPPKPFHDITHYYQENVTMENLCKLHGWGIREYPRRVFDAVL 121
Query: 123 FSNELDILTIRWKELYPYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIG 182
FSNELDILT+RWKELYPYIT+FVLLESNSTFTG PKPLVF+++RD+FKFV+PRLTYGTIG
Sbjct: 122 FSNELDILTLRWKELYPYITEFVLLESNSTFTGLPKPLVFASNRDKFKFVEPRLTYGTIG 181
Query: 183 GRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSRHTINLLRWCDDIPP 242
GRF++GENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPS+HTINLLRWCDDIPP
Sbjct: 182 GRFRRGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSKHTINLLRWCDDIPP 241
Query: 243 VLHLRLKNYLYSFEFLVDNNSWRASVHRYQTGKTRYAHYRQSDDILADAGWHCSFCFRHI 302
+LHLRLKNYLYSFEF VDNNSWRASVHRYQTGKTRYAHYRQ+DDILADAGWHCSFCFRHI
Sbjct: 242 ILHLRLKNYLYSFEFFVDNNSWRASVHRYQTGKTRYAHYRQTDDILADAGWHCSFCFRHI 301
Query: 303 SEFTFKMKAYSHFDRVRFSYFLNHKRIQKVICKGADLFDMLPEEYTFKEIIGKMGPVPHS 362
SEF FKMKAYSHFDRVRFS++LN +R+QKVICKGADLFDMLPEEYTFKEIIGK+GP+PHS
Sbjct: 302 SEFIFKMKAYSHFDRVRFSHYLNPERVQKVICKGADLFDMLPEEYTFKEIIGKLGPIPHS 361
Query: 363 FSAVHLPSYLLENADKYKFLLPGNCLRE 390
+SAVHLPSYLLENA KYKFLLPGNC RE
Sbjct: 362 YSAVHLPSYLLENAKKYKFLLPGNCFRE 389
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081354|emb|CBI16787.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224102421|ref|XP_002312671.1| predicted protein [Populus trichocarpa] gi|222852491|gb|EEE90038.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224110872|ref|XP_002315665.1| predicted protein [Populus trichocarpa] gi|222864705|gb|EEF01836.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|30683061|ref|NP_172759.2| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] gi|332190836|gb|AEE28957.1| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356567593|ref|XP_003552002.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297844196|ref|XP_002889979.1| glycosyl transferase family 17 protein [Arabidopsis lyrata subsp. lyrata] gi|297335821|gb|EFH66238.1| glycosyl transferase family 17 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|110742117|dbj|BAE98988.1| beta-1,4-N-acetylglucosaminyltransferase like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356540247|ref|XP_003538601.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356512672|ref|XP_003525041.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 392 | ||||||
| TAIR|locus:2031800 | 392 | AT1G12990 [Arabidopsis thalian | 0.994 | 0.994 | 0.838 | 2.8e-192 | |
| TAIR|locus:2200191 | 390 | AT1G67880 [Arabidopsis thalian | 0.987 | 0.992 | 0.803 | 2.5e-184 | |
| TAIR|locus:2091448 | 390 | AT3G27540 [Arabidopsis thalian | 0.971 | 0.976 | 0.771 | 1.3e-171 | |
| TAIR|locus:2145733 | 387 | AT5G14480 [Arabidopsis thalian | 0.977 | 0.989 | 0.742 | 2.8e-169 | |
| TAIR|locus:2084173 | 388 | AT3G01620 [Arabidopsis thalian | 0.977 | 0.987 | 0.719 | 1e-162 | |
| TAIR|locus:2042280 | 361 | AT2G13290 [Arabidopsis thalian | 0.864 | 0.939 | 0.580 | 1.1e-112 | |
| TAIR|locus:504955860 | 118 | AT3G26445 [Arabidopsis thalian | 0.170 | 0.567 | 0.820 | 1.3e-34 | |
| RGD|3084 | 538 | Mgat3 "mannosyl (beta-1,4-)-gl | 0.367 | 0.267 | 0.304 | 8.2e-17 | |
| UNIPROTKB|E1BJA5 | 536 | MGAT3 "Uncharacterized protein | 0.367 | 0.268 | 0.304 | 1.1e-16 | |
| UNIPROTKB|Q09327 | 533 | MGAT3 "Beta-1,4-mannosyl-glyco | 0.367 | 0.270 | 0.304 | 2.7e-16 |
| TAIR|locus:2031800 AT1G12990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1863 (660.9 bits), Expect = 2.8e-192, P = 2.8e-192
Identities = 327/390 (83%), Positives = 359/390 (92%)
Query: 1 MWWMMTNEGGHYCSKKSDDICGNVCGQESNRGLSMSRIRCIMRGLDLKTYIFLFALVPTC 60
MWWMM GGHYCSKK+DDICG VC QE R S SR+ C +RG+D+KTYIFL +VPTC
Sbjct: 1 MWWMMGEAGGHYCSKKTDDICGGVCSQEPGRFFSFSRLCCALRGVDMKTYIFLLVIVPTC 60
Query: 61 VFGIYVHGQKISYFLRPLWESPPKPFHEIPHYYHENVSMERLCKLHGWGIREYPRRVYDA 120
V YVHGQKISYFLRPLWESPPKPFH+IPHYYHEN SME LCKLHGWG+R+YPRRVYDA
Sbjct: 61 VLAGYVHGQKISYFLRPLWESPPKPFHDIPHYYHENASMETLCKLHGWGVRDYPRRVYDA 120
Query: 121 VLFSNELDILTIRWKELYPYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGT 180
VLFSNELDIL +RW+EL+PYITQFVLLESN+TFTG PKPLVF+AHRD+FKF++ RLTYGT
Sbjct: 121 VLFSNELDILAVRWRELFPYITQFVLLESNTTFTGLPKPLVFAAHRDEFKFIESRLTYGT 180
Query: 181 IGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSRHTINLLRWCDDI 240
+GGRF KG+NPF EEAYQRVALDQLL+IAGITDDDLL+MSDVDEIPSRHTINLLRWCD+I
Sbjct: 181 VGGRFVKGQNPFYEEAYQRVALDQLLRIAGITDDDLLLMSDVDEIPSRHTINLLRWCDEI 240
Query: 241 PPVLHLRLKNYLYSFEFLVDNNSWRASVHRYQTGKTRYAHYRQSDDILADAGWHCSFCFR 300
P +LHLRLKNYLYSFEFLVDN SWRAS+HRY+TGKTRYAHYRQSD+ILADAGWHCSFCFR
Sbjct: 241 PKILHLRLKNYLYSFEFLVDNKSWRASIHRYETGKTRYAHYRQSDEILADAGWHCSFCFR 300
Query: 301 HISEFTFKMKAYSHFDRVRFSYFLNHKRIQKVICKGADLFDMLPEEYTFKEIIGKMGPVP 360
ISEF FKMKAYSH DRVRF +FLN KR+Q+VICKGADLFDMLPEEYTFKEIIGKMGP+P
Sbjct: 301 RISEFIFKMKAYSHNDRVRFGHFLNPKRVQRVICKGADLFDMLPEEYTFKEIIGKMGPIP 360
Query: 361 HSFSAVHLPSYLLENADKYKFLLPGNCLRE 390
HSFSAVHLPSYLLENADKY+FLLPGNC+RE
Sbjct: 361 HSFSAVHLPSYLLENADKYRFLLPGNCIRE 390
|
|
| TAIR|locus:2200191 AT1G67880 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091448 AT3G27540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2145733 AT5G14480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2084173 AT3G01620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2042280 AT2G13290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:504955860 AT3G26445 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| RGD|3084 Mgat3 "mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BJA5 MGAT3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q09327 MGAT3 "Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 392 | |||
| pfam04724 | 357 | pfam04724, Glyco_transf_17, Glycosyltransferase fa | 0.0 |
| >gnl|CDD|218230 pfam04724, Glyco_transf_17, Glycosyltransferase family 17 | Back alignment and domain information |
|---|
Score = 639 bits (1649), Expect = 0.0
Identities = 268/360 (74%), Positives = 299/360 (83%), Gaps = 5/360 (1%)
Query: 32 GLSMSRIRCIMRGLDLKTYIFLFALVPTCVFGIYVHGQKISYFLRPLWESPPKPFHEIPH 91
L +SR++C +RGL ++ LF L+PTC+ GIY HGQKISYF RPLWE PPKPF IPH
Sbjct: 1 ALGISRLKCRLRGL----FLPLFVLMPTCLLGIYKHGQKISYFCRPLWEGPPKPFCGIPH 56
Query: 92 YYHENVSMERLCKLHGWGIREYPRRVYDAVLFSNELDILTIRWKELYPYITQFVLLESNS 151
YY+ENVSME LCKLHGWG RE PRRV+DAVLFSNE D+L +RW ELYPY+ QFVLLESNS
Sbjct: 57 YYYENVSMENLCKLHGWGPRETPRRVFDAVLFSNEFDLLEVRWHELYPYVDQFVLLESNS 116
Query: 152 TFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGRFKKGE-NPFVEEAYQRVALDQLLKIAG 210
TFTG PKPL F +R +FKFV+ ++ YG I G KKG NPF+EEAYQRVALD LL+IAG
Sbjct: 117 TFTGLPKPLYFLENRGRFKFVESKILYGFIDGFPKKGRKNPFIEEAYQRVALDGLLRIAG 176
Query: 211 ITDDDLLIMSDVDEIPSRHTINLLRWCDDIPPVLHLRLKNYLYSFEFLVDNNSWRASVHR 270
I DDD+LIMSD DEIPSRHTIN L+WCD IP VLHL L+NYLYSFE+ VD SWRASVHR
Sbjct: 177 IRDDDVLIMSDADEIPSRHTINFLKWCDGIPEVLHLHLRNYLYSFEYPVDGKSWRASVHR 236
Query: 271 YQTGKTRYAHYRQSDDILADAGWHCSFCFRHISEFTFKMKAYSHFDRVRFSYFLNHKRIQ 330
Y GKTRYAHYRQ+D ILADAGWHCSFCFR I F FKMKAYSH DRVR+ +LN KRIQ
Sbjct: 237 YMPGKTRYAHYRQTDHILADAGWHCSFCFRRIEGFVFKMKAYSHGDRVRWGDYLNPKRIQ 296
Query: 331 KVICKGADLFDMLPEEYTFKEIIGKMGPVPHSFSAVHLPSYLLENADKYKFLLPGNCLRE 390
+ICKG DLFDMLPEEYTFKEIIGKMGP+P S+SAVHLP YLLENADKYK+LLPGNC RE
Sbjct: 297 DLICKGGDLFDMLPEEYTFKEIIGKMGPIPPSYSAVHLPKYLLENADKYKYLLPGNCYRE 356
|
This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression. Length = 357 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 392 | |||
| PF04724 | 356 | Glyco_transf_17: Glycosyltransferase family 17; In | 100.0 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 95.4 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 86.82 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 81.91 |
| >PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-115 Score=873.49 Aligned_cols=354 Identities=59% Similarity=1.079 Sum_probs=341.7
Q ss_pred ccccceeeccccchHHHHHHHHhhhhheeeEEEeceeEeeecCCCCCCCCCCCCCcceeeccCccHHhHHhhcCCcccCC
Q 016270 34 SMSRIRCIMRGLDLKTYIFLFALVPTCVFGIYVHGQKISYFLRPLWESPPKPFHEIPHYYHENVSMERLCKLHGWGIREY 113 (392)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~~~~p~~~~p~~~~~~~~~~~~c~~hg~~~r~~ 113 (392)
+|||++|+++++ ++++++++|+|+++++.++++++|+|||+|||||+|||+||||||++.+|.++|++|||++|++
T Consensus 2 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~rp~w~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~R~~ 77 (356)
T PF04724_consen 2 SMSRRRCILRGL----FLFLFVLLPLCVIGVYQHGQSISCFCRPGWHGPPDPFCGIPHYYWESVSMSNLCQLHGWKPRKT 77 (356)
T ss_pred cchhHHHHHHHH----HHHHHHHHHHHhheeeecCceeEEeccCccCCCCCCCCCCCcceeecchhhhcccccCCCcCCC
Confidence 688999999986 6779999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecCChHHHHHHHHHHhcccccEEEEEEeCCCccCCCccccchhhhhhcccCCCCEEEEEeCCccCCC-CChh
Q 016270 114 PRRVYDAVLFSNELDILTIRWKELYPYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGRFKKG-ENPF 192 (392)
Q Consensus 114 pRkIyD~f~f~~ElDlLEIRL~eL~dvVD~FVIvES~~TftG~pKpL~f~~~~~rF~~~~~KIiy~~l~~~~~~~-~~~w 192 (392)
||||||||+||+|+|||||||+||+||||+|||||||.||+|.||||+|.+|++||+++++||+|+++++.+..+ .++|
T Consensus 78 pRrV~D~~~f~~ElDlLeiRl~eL~~vVD~FVIvEs~~Tf~G~~KpL~f~~~~~~f~~~~~KIiy~~l~~~~~~g~~~~w 157 (356)
T PF04724_consen 78 PRRVYDCFLFNNELDLLEIRLNELYDVVDYFVIVESNRTFTGKPKPLYFAENKERFAFFHDKIIYVTLDDPPEKGRKDPW 157 (356)
T ss_pred CCeEEEEEEeCChHHHHHHHHHHhhCcceEEEEEEECCCcCCCCCCccHHHHHHHHHhhhcceEEEEecCcCCCCCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876554 4999
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcEEEeeCCCCcCCHHHHHHhhhcCCCCCceEEEEeeeeeeeeeeecCCCceeeEEEec
Q 016270 193 VEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSRHTINLLRWCDDIPPVLHLRLKNYLYSFEFLVDNNSWRASVHRYQ 272 (392)
Q Consensus 193 ~~E~~qRn~l~~~l~~~~~~~dDliI~SDvDEIP~p~~l~~Lk~cdg~p~~l~l~lr~~~YsF~~~~~~~sW~~s~~~Y~ 272 (392)
++|++|||+|.++++.+|+++|||||+||+||||+|++|++||+|||+|++++|+|++|+|||+|+++.++|+++++.|.
T Consensus 158 ~~E~~qR~~l~~l~~~~~~~~dDliivSDvDEIP~p~~l~~Lr~cd~~p~~l~l~lr~y~YsF~~~~~~~~~r~~~~~~~ 237 (356)
T PF04724_consen 158 DRENYQRNALNGLLRLAGIQDDDLIIVSDVDEIPSPETLKFLRWCDGFPEPLHLRLRFYYYSFQFQHDGKSWRASVHTYS 237 (356)
T ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEEcCcccccCHHHHHHHHhcCCCCCeeEEEeeceEEEEEEecCCcchhhhhhhhc
Confidence 99999999998888888999999999999999999999999999999999999999999999999999999999888887
Q ss_pred CCcccccccccCCCCcCCceeecccCccChhHHHHHHHhccccCcCCccccCCHHHHHHHHHcCCcccCCCccchhHHHH
Q 016270 273 TGKTRYAHYRQSDDILADAGWHCSFCFRHISEFTFKMKAYSHFDRVRFSYFLNHKRIQKVICKGADLFDMLPEEYTFKEI 352 (392)
Q Consensus 273 ~~~t~~~~~R~~~~~l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d~~~~~~~~d~~~I~~~I~~G~Dlfd~~~e~y~~~e~ 352 (392)
.+.++|+++|+++.++++|||||||||+++++|++||+||||+|++++++++|+++||++||+|+|||||.+|+|+|+|+
T Consensus 238 ~~~~~~~~~r~~~~il~daGWHCS~Cf~~ie~i~~Km~SfSH~e~~r~~~~~D~~~I~~~I~~G~DlfD~~~~~~~~~~~ 317 (356)
T PF04724_consen 238 QGMRRYRHSRQSDHILADAGWHCSSCFSTIEEIINKMQSFSHQERNRWPEFLDPDYIQDLIRSGKDLFDRKPEEYRFKDL 317 (356)
T ss_pred cccchhhhhcccCccccCCceeccCcCCCHHHHHHHHHhhcccccccchhhcCHHHHHHHHhcCccccCCChHhcchhhh
Confidence 77888999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCCChHHhhcccccccccCCCcccCC
Q 016270 353 IGKMGPVPHSFSAVHLPSYLLENADKYKFLLPGNCLREI 391 (392)
Q Consensus 353 ~~kl~~i~~s~~~~~~P~yll~n~~rf~yLL~~~~~r~~ 391 (392)
++||++++++.+++++|+||++|++||+|||||||+||+
T Consensus 318 ~~kl~~i~~~~~~~~~P~yll~n~~kf~~Ll~~~~~~~~ 356 (356)
T PF04724_consen 318 IKKLGPIPRSYSAYYAPEYLLENADKFKYLLPGNCYRES 356 (356)
T ss_pred hhhcccCCcccccccCCHHHHhCHHHHhhccCCCccCCC
Confidence 999999999999999999999999999999999999985
|
4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane |
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 392 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-11 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 6e-11
Identities = 60/368 (16%), Positives = 115/368 (31%), Gaps = 95/368 (25%)
Query: 69 QKISYFLRPLWESPPKPFHEIPHYYHENVSMERLCKLHGWGIREYPRR------VYDAVL 122
QK+ Y + P W S I H L +L + Y V +A
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHS--IQAELRRL--LKSKPYENCLLVLLNVQNAKA 258
Query: 123 FSNELDI-----LTIRWKELYPYI-----TQFVLLESNSTFTGKPKPL-VFSAHRDQFKF 171
+ N ++ LT R+K++ ++ T L + T T + + K+
Sbjct: 259 W-NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT-PDEVKSLLL------KY 310
Query: 172 VD------PR-------LTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDL-- 216
+D PR I + G + + ++ V D+L I + + L
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW--DNWKHVNCDKLTTIIESSLNVLEP 368
Query: 217 -----------LIMSDVDEIPSRHTINLLRWCDDIPPVLHLRLKNYLYSFEFLV-DNNSW 264
+ IP+ ++L+ W D I + + + N L+ + +
Sbjct: 369 AEYRKMFDRLSVFPPSAH-IPT-ILLSLI-WFDVIKSDVMVVV-NKLHKYSLVEKQPKES 424
Query: 265 RASVHRYQTGKTRYAHYRQSDDILADAGWHCSFCFRHISEFTFKMKAYSHFDRVR---FS 321
S+ + Y + + H R I + K + D +
Sbjct: 425 TISIP------SIYLELKVKLENEYAL--H-----RSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 322 YFLNH-----KRIQKVICKGADLFDMLPEEYT-FKEIIGKMGPVPHSFSAVHLPSY---L 372
YF +H K I+ + + + F+ + K + H +A +
Sbjct: 472 YFYSHIGHHLKNIEH-----PERMTLFRMVFLDFRFLEQK---IRHDSTAWNASGSILNT 523
Query: 373 LENADKYK 380
L+ YK
Sbjct: 524 LQQLKFYK 531
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00