Citrus Sinensis ID: 016430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MVATTSTISRAFSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNLW
Secondary Structure (PSIPRED)
ccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccccccccEEEEEEccccccccccHHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHcccccccccEEEccccccccEEEEcccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccHHccccccccccccccccEEEccEEccccccccHHccccccccccccccccEEEHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccHHccccHEEHHHccccHHHHHHHHHHHHHHHHHcccccHcHHccccHHHcccccccccccccccEEEEEEcccccccccccHHHHHHHccccccEEEEEcccccHHHHHHHHcccccccEEEEEccccccEEEcccccccccccccEEcccccccccccEEEEEcccHHHHHHHHHHHHHHcccccccccccEEEEccccHHHccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccc
Coil and Loop (DISEMBL)
MVATTSTISRAFSFTCMFKlcrplfalstrthmesprvnsalrsparethigdtddgFITLQewqgwgavsplpALVQQIVEDLKALEknfdapmsfggnggrlqgdFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAmedcmcskvkhcslwygVRFWLymhpkdflrqnntgKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRagkskvwclypnknaiKMSVQdtlgygssedleytpmmtdgdntLNFVLIDGTWSNSAAMFNRLKEKaktvwdeedipcisltmgasamhklrpqpswdrTCTAAAAIGLLSELqllpkfsscgLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKarhnlnlw
Flexible Loop (DISEMBL)
mvattstisrafsftCMFKLCRPLFALSTRTHmesprvnsalrsparethIGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQtlgesekklQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEkaktvwdeeDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALttrrlrmgrsvtrkarhnlnlw
Low Complexity Region (SEG)
MVATTSTISRAFSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNLW
Disordered region (IsUnstruct)
*******ISRAFSFTCMFKLCRPLFALST*********************IGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLR****************
Disordered Region (DISOPRED)
*******ISRAFSFTCMFKLCRPLFAL*T*****************************ITLQEWQGWGAVSPLPALVQQIVEDLKAL**************************************************I*CRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGS************GDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEA***********************
Disordered Region (DISEMBL)
MVATTSTISRAFSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNLW
Disordered Region (DISPRO)
**********AFSFTCMFKLCRPLFALSTRTHMESPR*****************DDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRM*RS************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVATTSTISRAFSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNLW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	389	2.2.26 [Sep-21-2011]
Q47319	232	DTW domain-containing pro	N/A	no	0.426	0.715	0.244	4e-06

>sp|Q47319|YFIP_ECOLI DTW domain-containing protein YfiP OS=Escherichia coli (strain K12) GN=yfiP PE=3 SV=2

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 26/192 (13%)

Query: 144 GSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQA 203
           G++   CQ+C +  + C+CS +         RF L M   + ++ +NTG+L+  +L    
Sbjct: 25  GNRVRRCQRCLLPEKLCLCSTITPAQ--AKSRFCLLMFDTEPMKPSNTGRLIADILPDTV 82

Query: 204 ATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMT 263
           A              WS  +      +  L  N +   M V          ++ +TP   
Sbjct: 83  A------------FQWS--RTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTP--P 126

Query: 264 DGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWD 323
            G   L F+++DGTW  +  MF       K+ +  +++P IS+ +   + ++LR   +  
Sbjct: 127 AGKPPL-FIMLDGTWPEARKMFR------KSPY-LDNLPVISVDLSRLSAYRLREAQAEG 178

Query: 324 RTCTAAAAIGLL 335
           + CTA  AI LL
Sbjct: 179 QYCTAEVAIALL 190

Escherichia coli (strain K12) (taxid: 83333)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
302143284	390	unnamed protein product [Vitis vinifera]	0.976	0.974	0.686	1e-150
225446343	401	PREDICTED: uncharacterized protein LOC10	0.976	0.947	0.667	1e-147
147855567	401	hypothetical protein VITISV_021624 [Viti	0.976	0.947	0.667	1e-147
224121688	362	predicted protein [Populus trichocarpa]	0.915	0.983	0.709	1e-145
449444356	380	PREDICTED: uncharacterized protein LOC10	0.925	0.947	0.679	1e-140
449522414	382	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.928	0.945	0.674	1e-139
145335042	381	DTW domain-containing protein [Arabidops	0.946	0.965	0.629	1e-138
9280650	407	F21B7.29 [Arabidopsis thaliana]	0.946	0.904	0.589	1e-133
297843170	407	predicted protein [Arabidopsis lyrata su	0.946	0.904	0.603	1e-133
255553765	301	conserved hypothetical protein [Ricinus	0.745	0.963	0.737	1e-124

>gi|302143284|emb|CBI21845.3| unnamed protein product [Vitis vinifera]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/389 (68%), Positives = 303/389 (77%), Gaps = 9/389 (2%)

Query: 8   ISRAFSFTCMFKLCRPLFALSTRTHME----SPRVN---SALRSPARETHIGDTDDGF-I 59
           +S A  F C FK  +    L ++T ME    SP+     S   SP RE    D   G  I
Sbjct: 2   LSTARVFACNFKPSQSP-PLRSKTQMEARTRSPQSTFSRSGSLSPPRERLREDNGGGTAI 60

Query: 60  TLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRAT 119
            LQEWQGWG  SPLP  V +IV +LK LEK+F+A MSFGG GG+LQGDFKI EDKKHRAT
Sbjct: 61  ALQEWQGWGTESPLPERVAEIVHELKYLEKDFNAQMSFGGVGGKLQGDFKIQEDKKHRAT 120

Query: 120 YQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLY 179
           YQ LG+SEKKLQFF+ARQIACRLLGS+GYLCQKCW+A+EDCMCSKV  C LW+G+RFWLY
Sbjct: 121 YQALGDSEKKLQFFSARQIACRLLGSRGYLCQKCWLALEDCMCSKVIPCVLWHGIRFWLY 180

Query: 180 MHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA 239
           MHPKDFLRQNNTGKLLWQV GV+AATLCL+G+AE EEIMW+ F  AGKS VWCLYPNKNA
Sbjct: 181 MHPKDFLRQNNTGKLLWQVFGVKAATLCLFGIAEHEEIMWNTFALAGKSNVWCLYPNKNA 240

Query: 240 IKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEE 299
              SVQD     S   LE +   T+ +  LNF+LIDGTW+NSAAMF RLKE+AK  W EE
Sbjct: 241 PTKSVQDIFAQESLGGLECSSTTTNREKILNFILIDGTWNNSAAMFRRLKEQAKLAWGEE 300

Query: 300 DIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDA 359
           D+PCISL MGASAMHKLRPQPSWDRTCTAAAAIGLLSELQL+P+F S GLD+  EA+EDA
Sbjct: 301 DLPCISLAMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLIPEFGSYGLDKQAEAVEDA 360

Query: 360 LAVLLEALTTRRLRMGRSVTRKARHNLNL 388
           LAVLLEALT RRLRMGRS++RK RHN ++
Sbjct: 361 LAVLLEALTARRLRMGRSISRKQRHNTDI 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446343|ref|XP_002273967.1| PREDICTED: uncharacterized protein LOC100267683 [Vitis vinifera]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/400 (66%), Positives = 303/400 (75%), Gaps = 20/400 (5%)

Query: 8   ISRAFSFTCMFKLCRPLFALSTRTHME----SPRVN---SALRSPARETHIGDTDDG-FI 59
           +S A  F C FK  +    L ++T ME    SP+     S   SP RE    D   G  I
Sbjct: 2   LSTARVFACNFKPSQSP-PLRSKTQMEARTRSPQSTFSRSGSLSPPRERLREDNGGGTAI 60

Query: 60  TLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRAT 119
            LQEWQGWG  SPLP  V +IV +LK LEK+F+A MSFGG GG+LQGDFKI EDKKHRAT
Sbjct: 61  ALQEWQGWGTESPLPERVAEIVHELKYLEKDFNAQMSFGGVGGKLQGDFKIQEDKKHRAT 120

Query: 120 YQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLY 179
           YQ LG+SEKKLQFF+ARQIACRLLGS+GYLCQKCW+A+EDCMCSKV  C LW+G+RFWLY
Sbjct: 121 YQALGDSEKKLQFFSARQIACRLLGSRGYLCQKCWLALEDCMCSKVIPCVLWHGIRFWLY 180

Query: 180 MHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA 239
           MHPKDFLRQNNTGKLLWQV GV+AATLCL+G+AE EEIMW+ F  AGKS VWCLYPNKNA
Sbjct: 181 MHPKDFLRQNNTGKLLWQVFGVKAATLCLFGIAEHEEIMWNTFALAGKSNVWCLYPNKNA 240

Query: 240 IKMSVQDTLGYGSSEDLEYTPMM-----------TDGDNTLNFVLIDGTWSNSAAMFNRL 288
              SVQD     S   LE +              T+ +  LNF+LIDGTW+NSAAMF RL
Sbjct: 241 PTKSVQDIFAQESLGGLECSSTTGEQHGGAQCGWTNREKILNFILIDGTWNNSAAMFRRL 300

Query: 289 KEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCG 348
           KE+AK  W EED+PCISL MGASAMHKLRPQPSWDRTCTAAAAIGLLSELQL+P+F S G
Sbjct: 301 KEQAKLAWGEEDLPCISLAMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLIPEFGSYG 360

Query: 349 LDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNL 388
           LD+  EA+EDALAVLLEALT RRLRMGRS++RK RHN ++
Sbjct: 361 LDKQAEAVEDALAVLLEALTARRLRMGRSISRKQRHNTDI 400

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855567|emb|CAN81333.1| hypothetical protein VITISV_021624 [Vitis vinifera]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/400 (66%), Positives = 302/400 (75%), Gaps = 20/400 (5%)

Query: 8   ISRAFSFTCMFKLCRPLFALSTRTHME----SPRVN---SALRSPARETHIGDTDDGF-I 59
           +S A  F C FK  +    L ++T ME    SP+     S   SP RE    D   G  I
Sbjct: 2   LSTARVFACNFKPSQSP-PLRSKTQMEARTRSPQSTFSRSGSLSPPRERLREDNGGGTAI 60

Query: 60  TLQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRAT 119
            LQEWQGWG  SPLP  V +IV +LK LEK+F+A MSFGG GG+LQGDFKI EDKKHRAT
Sbjct: 61  ALQEWQGWGTESPLPERVAEIVHELKYLEKDFNAQMSFGGVGGKLQGDFKIQEDKKHRAT 120

Query: 120 YQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLY 179
           YQ LG+SEKKLQFF+ARQIACRLLGS+GYLCQKCW+A+EDCMCSKV  C LW+G+RFWLY
Sbjct: 121 YQALGDSEKKLQFFSARQIACRLLGSRGYLCQKCWLALEDCMCSKVIPCXLWHGIRFWLY 180

Query: 180 MHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA 239
           MHPKDFLRQNNTGKLLWQV GV+AATLCL+G+AE EEIMW+ F  AGKS VWCLYPNKNA
Sbjct: 181 MHPKDFLRQNNTGKLLWQVFGVKAATLCLFGIAEHEEIMWNTFALAGKSNVWCLYPNKNA 240

Query: 240 IKMSVQDTLGYGSSEDLEYTPMM-----------TDGDNTLNFVLIDGTWSNSAAMFNRL 288
              SVQD     S   LE                T+ +  LNF+LIDGTW+NSAAMF RL
Sbjct: 241 PTKSVQDIFAQESLGGLECPSTTGEQHGGAQCGRTNREKILNFILIDGTWNNSAAMFRRL 300

Query: 289 KEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCG 348
           KE+AK  W EED+PCISL MGASAMHKLRPQPSWDRTCTAAAAIGLLSELQL+P+F S G
Sbjct: 301 KEQAKLAWGEEDLPCISLAMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLIPEFGSYG 360

Query: 349 LDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNL 388
           LD+  EA+EDALAVLLEALT RRLRMGRS++RK RHN ++
Sbjct: 361 LDKQAEAVEDALAVLLEALTARRLRMGRSISRKQRHNTDI 400

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121688|ref|XP_002330628.1| predicted protein [Populus trichocarpa] gi|222872232|gb|EEF09363.1| predicted protein [Populus trichocarpa]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/361 (70%), Positives = 292/361 (80%), Gaps = 5/361 (1%)

Query: 33  MESP---RVNSALRSPARETHIGDTDDGF-ITLQEWQGWGAVSPLPALVQQIVEDLKALE 88
           MESP          SP     I DT DGF ITLQEWQGWGAVSPLPA V +IV+DL+ LE
Sbjct: 1   MESPPRTHFTPTSHSPQTNPDIKDTSDGFTITLQEWQGWGAVSPLPAKVVEIVKDLQLLE 60

Query: 89  KNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGY 148
           K+ +  MSF G+ G+L+GDF + E+KKHRATYQ LG+SEKKLQFF+ARQIACRLLGS+GY
Sbjct: 61  KSTEVQMSFSGHRGKLEGDFGMQENKKHRATYQALGDSEKKLQFFSARQIACRLLGSRGY 120

Query: 149 LCQKCWIAME-DCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLC 207
           LCQKCW+ +E DCMCSKVK  SLW G+RFWLYMHPKDFLRQNNTGKLLWQVLGV++ATLC
Sbjct: 121 LCQKCWLPLEEDCMCSKVKPSSLWRGIRFWLYMHPKDFLRQNNTGKLLWQVLGVESATLC 180

Query: 208 LYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDN 267
           LYG+AEDEEIMW+A K AGK KVWCLYPNKN    SVQD +    S D E    MT+   
Sbjct: 181 LYGIAEDEEIMWNACKIAGKDKVWCLYPNKNVATKSVQDAVCQEISADPECNTTMTNEYK 240

Query: 268 TLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCT 327
            LNF+LIDGTWSNSAAMFNRLKEK K+VW  ED+PCISL+ G S MHKLRPQPSWDRTCT
Sbjct: 241 PLNFILIDGTWSNSAAMFNRLKEKTKSVWGVEDLPCISLSAGVSTMHKLRPQPSWDRTCT 300

Query: 328 AAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLN 387
           AAAAIGLLSELQ+LP+FSS GLD+  EA+E+A+ VLLEALT RRLRMGRS+TR+ RH+ N
Sbjct: 301 AAAAIGLLSELQVLPQFSSYGLDKQNEALENAVDVLLEALTARRLRMGRSITRRLRHSSN 360

Query: 388 L 388
           +
Sbjct: 361 I 361

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444356|ref|XP_004139941.1| PREDICTED: uncharacterized protein LOC101203963 [Cucumis sativus]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/362 (67%), Positives = 280/362 (77%), Gaps = 2/362 (0%)

Query: 23  PLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIVE 82
           P  A S +T M+S   N    +    +    T+   ITLQEWQGWG+ SP+P +V +I++
Sbjct: 16  PSRAFSIKTQMDSITRNPDGYTSTSASTSKPTETP-ITLQEWQGWGSTSPVPTMVTEIID 74

Query: 83  DLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRL 142
           +LK LEK  DA MSFGGNGG+LQG FK  EDKKHRATYQ LG SE+KLQFF+ARQIACRL
Sbjct: 75  ELKVLEKTVDAQMSFGGNGGKLQGYFKTQEDKKHRATYQALGSSEQKLQFFSARQIACRL 134

Query: 143 LGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQ 202
           LGS+ YLCQKCW+  EDCMCS+VKHCSLW   RFWLYMHPKDFLRQNNTGKLL QV G +
Sbjct: 135 LGSRDYLCQKCWLPFEDCMCSRVKHCSLWDRARFWLYMHPKDFLRQNNTGKLLLQVFGKE 194

Query: 203 AATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMM 262
           A TL LYG++E EEIMW+AFK AG+SKV CLYPNKNA    VQ+  G   S   E T  M
Sbjct: 195 ATTLSLYGISEHEEIMWNAFKSAGRSKVCCLYPNKNATSKGVQEAFGSELSTKQENTQQM 254

Query: 263 TDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSW 322
           TDGD  LNF+LIDGTWSNSAAMFNRLKE+A  VW  EDIPCISL+ G+SAMHKLRPQPSW
Sbjct: 255 TDGDGILNFILIDGTWSNSAAMFNRLKEQAILVWG-EDIPCISLSTGSSAMHKLRPQPSW 313

Query: 323 DRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKA 382
           DRTCTAAAA  LL ELQL+PKFSS   ++  EA+EDAL VLLEALT RR+RMGRS+TRK 
Sbjct: 314 DRTCTAAAAASLLFELQLVPKFSSVEFEKQGEALEDALEVLLEALTARRIRMGRSITRKV 373

Query: 383 RH 384
           RH
Sbjct: 374 RH 375

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522414|ref|XP_004168221.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101231628 [Cucumis sativus]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/363 (67%), Positives = 278/363 (76%), Gaps = 2/363 (0%)

Query: 23  PLFALSTRTHMES-PRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVSPLPALVQQIV 81
           P  A S +T M+S  R      S +         +  ITLQEWQGWG+ SP+P +V +I+
Sbjct: 16  PSRAFSIKTQMDSITRNPDGYTSTSTCASTSKPTETPITLQEWQGWGSTSPVPTMVTEII 75

Query: 82  EDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACR 141
           ++LK LEK  DA MSFGGNGG+LQG FK  ED KHRATYQ LG SE+KLQFF+ARQIACR
Sbjct: 76  DELKVLEKTVDAQMSFGGNGGKLQGYFKTQEDXKHRATYQALGSSEQKLQFFSARQIACR 135

Query: 142 LLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGV 201
           LLGS+ YLCQKCW+  EDCMCS+VKHCSLW   RFWLYMHPKDFLRQNNTGKLL QV G 
Sbjct: 136 LLGSRDYLCQKCWLPFEDCMCSRVKHCSLWDRARFWLYMHPKDFLRQNNTGKLLLQVFGK 195

Query: 202 QAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPM 261
           +A TL LYG++E EEIMW+AFK AG+SKV CLYPNKNA    VQ+  G   S   E T  
Sbjct: 196 EATTLSLYGISEHEEIMWNAFKSAGRSKVCCLYPNKNATSKGVQEAFGSELSTKQENTQQ 255

Query: 262 MTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPS 321
           MTDGD  LNF+LIDGTWSNSAAMFNRLKE+A  VW  EDIPCISL+ G+SAMHKLRPQPS
Sbjct: 256 MTDGDGILNFILIDGTWSNSAAMFNRLKEQAILVWG-EDIPCISLSTGSSAMHKLRPQPS 314

Query: 322 WDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRK 381
           WDRTCTAAAA  LL ELQL+PKFSS   ++  EA+EDAL VLLEALT RR+RMGRS+TRK
Sbjct: 315 WDRTCTAAAAASLLFELQLVPKFSSVEFEKQGEALEDALEVLLEALTARRIRMGRSITRK 374

Query: 382 ARH 384
            RH
Sbjct: 375 VRH 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145335042|ref|NP_171865.4| DTW domain-containing protein [Arabidopsis thaliana] gi|332189476|gb|AEE27597.1| DTW domain-containing protein [Arabidopsis thaliana]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/378 (62%), Positives = 296/378 (78%), Gaps = 10/378 (2%)

Query: 12  FSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVS 71
           FS + +F   R L A+  R  M S    S LRS  RE  +   D+G I+++EW+ WG VS
Sbjct: 12  FSPSLLFHR-RNLVAVGQRLLMTS----SILRSHTREFDV--CDEGIISVEEWRKWGPVS 64

Query: 72  PLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQ 131
           P P+ V+QIV+DLK LE   D+P+ FGGNGG+LQG F   EDKKHRATY+ L + EKK +
Sbjct: 65  PFPSAVKQIVDDLKVLECKLDSPIDFGGNGGKLQGPFGAYEDKKHRATYEALDDPEKKFR 124

Query: 132 FFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNT 191
           FF+ARQ+ACRLLGS+GYLCQKCW+AMEDCMCS VK C LW  +RFWLYMHP+DFLRQNNT
Sbjct: 125 FFSARQVACRLLGSRGYLCQKCWLAMEDCMCSYVKPCGLWKRIRFWLYMHPRDFLRQNNT 184

Query: 192 GKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA-IKMSVQDTLGY 250
           GKLLWQ+ GVQ+ATLC++G+AEDEEIMW+ FKRAGKS+V CLYPN N+ +  SV+D  G 
Sbjct: 185 GKLLWQIFGVQSATLCVFGIAEDEEIMWNEFKRAGKSQVRCLYPNHNSEVTFSVKDAFGS 244

Query: 251 GSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGA 310
            +SE+  +    TD D TL+F+L+DGTW+NSAAM  RLK+ AK+VW +ED+PCISL  GA
Sbjct: 245 SASEN--HVSSTTDEDKTLHFILLDGTWNNSAAMLKRLKDHAKSVWGDEDLPCISLATGA 302

Query: 311 SAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTR 370
           SAMHKLRPQPSWDRTCTAAAAIGLLSEL LLP+ SS  LD+  +A+E+AL +LL++LT R
Sbjct: 303 SAMHKLRPQPSWDRTCTAAAAIGLLSELSLLPQLSSYELDKQADAVEEALVILLDSLTGR 362

Query: 371 RLRMGRSVTRKARHNLNL 388
           RLRMGRS+TRK R+ +++
Sbjct: 363 RLRMGRSITRKGRNTISM 380

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9280650|gb|AAF86519.1|AC002560_12 F21B7.29 [Arabidopsis thaliana]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/404 (58%), Positives = 296/404 (73%), Gaps = 36/404 (8%)

Query: 12  FSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVS 71
           FS + +F   R L A+  R  M S    S LRS  RE  +   D+G I+++EW+ WG VS
Sbjct: 12  FSPSLLFHR-RNLVAVGQRLLMTS----SILRSHTREFDV--CDEGIISVEEWRKWGPVS 64

Query: 72  PLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQ 131
           P P+ V+QIV+DLK LE   D+P+ FGGNGG+LQG F   EDKKHRATY+ L + EKK +
Sbjct: 65  PFPSAVKQIVDDLKVLECKLDSPIDFGGNGGKLQGPFGAYEDKKHRATYEALDDPEKKFR 124

Query: 132 FFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPK-------- 183
           FF+ARQ+ACRLLGS+GYLCQKCW+AMEDCMCS VK C LW  +RFWLYMHP+        
Sbjct: 125 FFSARQVACRLLGSRGYLCQKCWLAMEDCMCSYVKPCGLWKRIRFWLYMHPRVSIVPTSF 184

Query: 184 ------------------DFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRA 225
                             DFLRQNNTGKLLWQ+ GVQ+ATLC++G+AEDEEIMW+ FKRA
Sbjct: 185 SYSNRQFLCIDMLFSCWQDFLRQNNTGKLLWQIFGVQSATLCVFGIAEDEEIMWNEFKRA 244

Query: 226 GKSKVWCLYPNKNA-IKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAM 284
           GKS+V CLYPN N+ +  SV+D  G  +SE+  +    TD D TL+F+L+DGTW+NSAAM
Sbjct: 245 GKSQVRCLYPNHNSEVTFSVKDAFGSSASEN--HVSSTTDEDKTLHFILLDGTWNNSAAM 302

Query: 285 FNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKF 344
             RLK+ AK+VW +ED+PCISL  GASAMHKLRPQPSWDRTCTAAAAIGLLSEL LLP+ 
Sbjct: 303 LKRLKDHAKSVWGDEDLPCISLATGASAMHKLRPQPSWDRTCTAAAAIGLLSELSLLPQL 362

Query: 345 SSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNL 388
           SS  LD+  +A+E+AL +LL++LT RRLRMGRS+TRK R+ +++
Sbjct: 363 SSYELDKQADAVEEALVILLDSLTGRRLRMGRSITRKGRNTISM 406

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843170|ref|XP_002889466.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335308|gb|EFH65725.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/404 (60%), Positives = 298/404 (73%), Gaps = 36/404 (8%)

Query: 12  FSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVS 71
           FS + +F   R L A+  R  M S   NS  RS  RE      DDGFI+++EW+ WG VS
Sbjct: 12  FSPSLLFH-SRYLGAVGRRRLMTS--ANS--RSQPRE--FDGCDDGFISVEEWRRWGPVS 64

Query: 72  PLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQ 131
           PLPA V+QIVEDLK LE   D+P+ FGGNGG+LQG F   EDKKHRATY+ L + EKK +
Sbjct: 65  PLPAAVKQIVEDLKVLECKLDSPIEFGGNGGKLQGPFGAYEDKKHRATYEALDDPEKKFR 124

Query: 132 FFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPK-------- 183
           FF+ARQIACRLLGS+GYLCQKCW+AMEDCMCS VK C LW  +RFWLYMHP+        
Sbjct: 125 FFSARQIACRLLGSRGYLCQKCWLAMEDCMCSYVKPCGLWKRIRFWLYMHPRVSIAPTSL 184

Query: 184 ------------------DFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRA 225
                             DFLRQNNTGKLLWQ+ GVQ+ATLC++G+AEDEEIMW+ FKRA
Sbjct: 185 GFSNRQFLCIDMRFSCWQDFLRQNNTGKLLWQIFGVQSATLCVFGLAEDEEIMWNEFKRA 244

Query: 226 GKSKVWCLYPNKNA-IKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAM 284
           GK++V CLYPN N+ +  SV+D  G  +SE+   +  MTD D TL+F+L+DGTW+NSAAM
Sbjct: 245 GKNQVRCLYPNHNSELTFSVKDAFGTTASENPGSS--MTDEDKTLHFILLDGTWNNSAAM 302

Query: 285 FNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKF 344
             RLK+ AK+VW +ED+PCISL  GASAMHKLRPQPSWDRTCTAAAAIGLLSEL LLP+ 
Sbjct: 303 LKRLKDHAKSVWGDEDLPCISLATGASAMHKLRPQPSWDRTCTAAAAIGLLSELSLLPQL 362

Query: 345 SSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLNL 388
           SS  LD+  +A+E+AL +LL++LT RRLRMGRS+TRK R+ +++
Sbjct: 363 SSYELDKQADAVEEALVILLDSLTGRRLRMGRSITRKGRNTISM 406

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553765|ref|XP_002517923.1| conserved hypothetical protein [Ricinus communis] gi|223542905|gb|EEF44441.1| conserved hypothetical protein [Ricinus communis]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/293 (73%), Positives = 248/293 (84%), Gaps = 3/293 (1%)

Query: 95  MSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCW 154
           M+FGGNGG+LQG+FK+ EDKKHRATY+ LG+SE+KLQFF+ARQIACR+LGS+GYLCQKCW
Sbjct: 1   MTFGGNGGKLQGEFKLHEDKKHRATYEALGDSEEKLQFFSARQIACRVLGSRGYLCQKCW 60

Query: 155 IAME-DCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAE 213
           + +E DCMCSKVKH SLW G+RFWLYMHPKDFLRQNNTGKLLWQV GVQ+A LCL+G+ E
Sbjct: 61  LPLEEDCMCSKVKHSSLWPGLRFWLYMHPKDFLRQNNTGKLLWQVFGVQSAMLCLFGIPE 120

Query: 214 DEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDT-LGYGSSEDLEYTPMMTDGDNTLNFV 272
            EE+MW+AFK AGK KVWCLYPNKNAI  SVQD  +  G +  ++ T    +   TLNFV
Sbjct: 121 HEEVMWNAFKHAGKDKVWCLYPNKNAITKSVQDAFVQLGGNCHVDSTAQANE-HKTLNFV 179

Query: 273 LIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAI 332
           LIDGTWSNSAAMF RLKE+ K+VW EED+PCISL  GAS MHKLRPQPS+DRTCTA AAI
Sbjct: 180 LIDGTWSNSAAMFRRLKEQTKSVWGEEDLPCISLATGASMMHKLRPQPSYDRTCTAGAAI 239

Query: 333 GLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHN 385
           GLLSELQ LP+ SS GLD+  EA+ED+L VLLEALTTRRLRMGRS+TRK R  
Sbjct: 240 GLLSELQDLPELSSYGLDKQAEALEDSLDVLLEALTTRRLRMGRSITRKVRQQ 292

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
TAIR|locus:2825052	381	AT1G03687 "AT1G03687" [Arabido	0.946	0.965	0.629	5.2e-129

TAIR|locus:2825052 AT1G03687 "AT1G03687" [Arabidopsis thaliana (taxid:3702)]

 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 238/378 (62%), Positives = 296/378 (78%)

Query:    12 FSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVS 71
             FS + +F   R L A+  R  M S    S LRS  RE  +   D+G I+++EW+ WG VS
Sbjct:    12 FSPSLLFHR-RNLVAVGQRLLMTS----SILRSHTREFDV--CDEGIISVEEWRKWGPVS 64

Query:    72 PLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQ 131
             P P+ V+QIV+DLK LE   D+P+ FGGNGG+LQG F   EDKKHRATY+ L + EKK +
Sbjct:    65 PFPSAVKQIVDDLKVLECKLDSPIDFGGNGGKLQGPFGAYEDKKHRATYEALDDPEKKFR 124

Query:   132 FFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNT 191
             FF+ARQ+ACRLLGS+GYLCQKCW+AMEDCMCS VK C LW  +RFWLYMHP+DFLRQNNT
Sbjct:   125 FFSARQVACRLLGSRGYLCQKCWLAMEDCMCSYVKPCGLWKRIRFWLYMHPRDFLRQNNT 184

Query:   192 GKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA-IKMSVQDTLGY 250
             GKLLWQ+ GVQ+ATLC++G+AEDEEIMW+ FKRAGKS+V CLYPN N+ +  SV+D  G 
Sbjct:   185 GKLLWQIFGVQSATLCVFGIAEDEEIMWNEFKRAGKSQVRCLYPNHNSEVTFSVKDAFGS 244

Query:   251 GSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGA 310
              +SE+  +    TD D TL+F+L+DGTW+NSAAM  RLK+ AK+VW +ED+PCISL  GA
Sbjct:   245 SASEN--HVSSTTDEDKTLHFILLDGTWNNSAAMLKRLKDHAKSVWGDEDLPCISLATGA 302

Query:   311 SAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTR 370
             SAMHKLRPQPSWDRTCTAAAAIGLLSEL LLP+ SS  LD+  +A+E+AL +LL++LT R
Sbjct:   303 SAMHKLRPQPSWDRTCTAAAAIGLLSELSLLPQLSSYELDKQADAVEEALVILLDSLTGR 362

Query:   371 RLRMGRSVTRKARHNLNL 388
             RLRMGRS+TRK R+ +++
Sbjct:   363 RLRMGRSITRKGRNTISM 380


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      389       389   0.00093  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  285 KB (2147 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.48u 0.17s 29.65t   Elapsed:  00:00:01
  Total cpu time:  29.48u 0.17s 29.65t   Elapsed:  00:00:01
  Start:  Sat May 11 06:34:56 2013   End:  Sat May 11 06:34:57 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	389
pfam03942	196	pfam03942, DTW, DTW domain	5e-38
COG3148	231	COG3148, COG3148, Uncharacterized conserved protei	1e-08

>gnl|CDD|217805 pfam03942, DTW, DTW domain

 Score =  135 bits (341), Expect = 5e-38
 Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 45/235 (19%)

Query: 147 GYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATL 206
            + C++C + ++ C+C+ +    L    +  +  HP +  R  NTG+LL   L + A T 
Sbjct: 2   RFRCERCCVPVKHCLCAYL--PPLEAPTQVDILQHPNESDRPLNTGRLL--ALLL-ADTR 56

Query: 207 CLYG--VAEDEEIMWSAFKRAGKSKVWCLYPNKNAI---KMSVQDTLGYGSSEDLEYTPM 261
                    D              +V  L+P + +    ++SV+ TL             
Sbjct: 57  AFTWSRTEPDPR--LLELLALPDYQVVLLFPGETSEELEEVSVESTL------------- 101

Query: 262 MTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPS 321
             D      F+L+DGTW+ +  MF +            D+P +SL     + ++LR QP 
Sbjct: 102 --DEGKPPRFILLDGTWNEARKMFRKSP-------YLRDLPQVSLATERLSFYRLRKQPP 152

Query: 322 WDRTCTAAAAIGLLSELQLLPKFSSCGLDEAVEAIEDALAVLLEALTTRRLRMGR 376
                TA AA  LL EL+               AI +AL   L+AL  R      
Sbjct: 153 EGCLSTAEAAAQLLDELEDNY-----------RAIAEALLRPLDALCGRYQLAKG 196

This presumed domain is found in bacterial and eukaryotic proteins. Its function is unknown. The domain contains multiple conserved motifs including a DTXW motif that this domain has been named after. Length = 196

>gnl|CDD|225690 COG3148, COG3148, Uncharacterized conserved protein [Function unknown]

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 30/192 (15%)

Query: 150 CQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLY 209
           CQ+C +  + C+C+ +    L    RF L MH  + ++ +NTG+L+              
Sbjct: 30  CQRCLLPEKHCLCATIP--PLEARSRFCLLMHDTEPMKPSNTGRLI------------AD 75

Query: 210 GVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMM--TDGDN 267
            +A+     WS  +   +       P+        Q  L + +    E T ++     + 
Sbjct: 76  ILADTRAFQWSRTEPNPELLALLANPD-------YQPYLVFPAEYAEELTEVISTAPAEK 128

Query: 268 TLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCT 327
              F+L+DGTW  +  MF       K+ +   D+P +SL     + ++LR   +  + CT
Sbjct: 129 PPLFILLDGTWREARKMFR------KSPY-LADLPVVSLDPERLSAYRLRKAQAEGQLCT 181

Query: 328 AAAAIGLLSELQ 339
           A  A  LL    
Sbjct: 182 AEVAAALLDMAG 193

Length = 231

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	389
COG3148	231	Uncharacterized conserved protein [Function unknow	100.0
PF03942	203	DTW: DTW domain; InterPro: IPR005636 This presumed	100.0
KOG4382	276	consensus Uncharacterized conserved protein, conta	99.86
KOG3795	230	consensus Uncharacterized conserved protein [Funct	99.52
PRK02287	171	hypothetical protein; Provisional	97.9
PF04034	127	DUF367: Domain of unknown function (DUF367); Inter	96.71
COG2042	179	Uncharacterized conserved protein [Function unknow	96.17

>COG3148 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=6.9e-64  Score=463.04  Aligned_cols=230  Identities=23%  Similarity=0.404  Sum_probs=211.4

Q ss_pred             ccchhhHHHHhhhcccccchhhhHHhhhhhhhcCCCCcCCcccccCCCCcccCCCcCccccCCcEEEEEeCCCcCCCCCC
Q 016430          111 LEDKKHRATYQTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNN  190 (389)
Q Consensus       111 ~~~~~~rl~~~rl~~s~r~~~~f~AR~~~~~l~Gsr~~rC~~C~lp~~~CiC~~ip~~~L~~~~r~~LLmHp~E~~rpsN  190 (389)
                      ++|||++||++||+++|||   |+||       |+++.+|++|.++.++|+|+.+|++  +++++|+|||||+|++||+|
T Consensus         1 ~~~a~~~l~~~rl~r~t~p---f~ar-------g~~~~rC~~C~l~~~~CLCa~ip~~--ea~~~~~Ll~hdtE~~kpsN   68 (231)
T COG3148           1 TENAVLQLRQERLARATRP---FLAR-------GNRVRRCQRCLLPEKHCLCATIPPL--EARSRFCLLMHDTEPMKPSN   68 (231)
T ss_pred             CchHHHHHHHHHHHHhhch---hhhc-------CCcchhhhhhCChhhhccccCcCCc--ccceeEEEEecCccccCCCc
Confidence            5799999999999999999   9999       9999999999999999999999975  59999999999999999999


Q ss_pred             hHHHHHHhcccCCeEEEEeccCCChHHHHHHHHhcCCCCeEEEccCCCccccccccccCCCCCCCccCCCCCCCCCCcee
Q 016430          191 TGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLN  270 (389)
Q Consensus       191 TGrLla~~L~~~~~~i~~~Gr~e~e~~l~~~L~~dp~~~~~LLFP~e~A~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~  270 (389)
                      |||||+++++ |+..+.|+ |++.+++|++++. +|+|++|||||+++|.+..++..              ....+|+|+
T Consensus        69 Tgrliad~l~-dt~a~~ws-Rte~~~eLl~ll~-~P~~~p~lvfP~e~a~e~t~v~~--------------~~p~~k~pl  131 (231)
T COG3148          69 TGRLIADILA-DTRAFQWS-RTEPNPELLALLA-NPDYQPYLVFPAEYAEELTEVIS--------------TAPAEKPPL  131 (231)
T ss_pred             chhHHHHhhh-hhhhhhcc-ccCCCHHHHHHHh-CCCCceEEEcchHHHHHHHHHhh--------------cccccCCce
Confidence            9999999997 89999996 8899999999888 99999999999999999887632              234458999


Q ss_pred             EEEEcCChHHHHHHHHHhhhhccCccccCCCceEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCccccCCCc
Q 016430          271 FVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLD  350 (389)
Q Consensus       271 ~IlLDGTW~QArKMfrrip~~akSp~L~~~LP~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l~~~G~~  350 (389)
                      ||||||||++||||||      ||||| ++||+|||.++..|.|+|||++.+++|||+||++.+|.+         +|++
T Consensus       132 fIllDgTW~eArKMfr------ksPyL-a~lP~vsl~~~~lS~YRLRka~~e~~lcT~Eva~~lLd~---------~gd~  195 (231)
T COG3148         132 FILLDGTWREARKMFR------KSPYL-ADLPVVSLDPERLSAYRLRKAQAEGQLCTAEVAAALLDM---------AGDE  195 (231)
T ss_pred             EEEecCccHHHHHHHh------cCchh-ccCCccccCHHHhhHHHHhhCCCCCceeHHHHHHHHHHH---------hCCh
Confidence            9999999999999999      59999 999999999999999999999999999999999999999         4999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCCCcccccccccC
Q 016430          351 EAVEAIEDALAVLLEALTTRRLRMGRSVTRKARHNLN  387 (389)
Q Consensus       351 ~~a~~L~~~f~~fi~~~~a~r~r~~r~~~r~~r~~~~  387 (389)
                      .++++|.++|++|++.|++.|.+.  -..|+.+|..|
T Consensus       196 ~aae~L~~~f~~f~e~yla~k~~~--~~~~~~~~~e~  230 (231)
T COG3148         196 RAAEALGKHFDAFKERYLAGKSEH--LGERTAAHQEN  230 (231)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCccc--ccccChhhhhc
Confidence            999999999999999999998877  44455555443

>PF03942 DTW: DTW domain; InterPro: IPR005636 This presumed domain is found in bacterial and eukaryotic proteins

Probab=100.00  E-value=2.1e-47  Score=354.16  Aligned_cols=200  Identities=24%  Similarity=0.430  Sum_probs=166.6

Q ss_pred             CCcCCcccccCCCCcccCCCcCccccCCcEEEEEeCCCcCCCCCChHHHHHHhcccCCeEEEEeccCCChHHHHHHHHhc
Q 016430          146 QGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRA  225 (389)
Q Consensus       146 r~~rC~~C~lp~~~CiC~~ip~~~L~~~~r~~LLmHp~E~~rpsNTGrLla~~L~~~~~~i~~~Gr~e~e~~l~~~L~~d  225 (389)
                      |+.+|++|++|...|+|+.+|++  +++++|+|||||+|..|++|||+|+++++  +++.++++++.+++..+...+. +
T Consensus         1 rr~~C~~C~~~~~~C~C~~~~~v--~~~~~v~iL~Hp~E~~~~~nTg~l~~~~l--~~~~i~~~~~~~~~~~~~~~~~-~   75 (203)
T PF03942_consen    1 RRFRCPRCWRPLSLCICSLIPPV--ELPTRVVILQHPKERKRASNTGRLLALCL--PDCEIIVWPRFEPDERLLELLS-D   75 (203)
T ss_pred             CCCcCcCCCCccccCCCcCCCCC--CCCcEEEEEECchhhhcccChHHHHHHhh--cccEEEEeCCCCCCHHHHHHhh-C
Confidence            58899999999999999999865  59999999999999999999999999987  4777777666655555444444 7


Q ss_pred             CCCCeEEEccCCCccccccccccCCCCCCCccCCCCCCCCCCceeEEEEcCChHHHHHHHHHhhhhccCccccCCCceEE
Q 016430          226 GKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCIS  305 (389)
Q Consensus       226 p~~~~~LLFP~e~A~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~IlLDGTW~QArKMfrrip~~akSp~L~~~LP~vs  305 (389)
                      +.+.++||||+++|.+++++...   .... .........+++++||||||||+||||||++      |||| ++||+|+
T Consensus        76 ~~~~~~lLfP~~~a~~~~~~~~~---~~~~-~~~~~~~~~~~~~~lIviDgTW~qA~km~~~------~p~l-~~lp~v~  144 (203)
T PF03942_consen   76 PPYRTVLLFPSEDAIDLEELFSA---ASGE-ALQSSEEDSGKPKTLIVIDGTWRQAKKMLRR------SPWL-QQLPRVS  144 (203)
T ss_pred             CCCcEEEEeeCCcccchhHHhhh---hccc-cccccccccCCceEEEEECCchHHHHHHHhh------Cccc-cCCceee
Confidence            78899999999999998765211   0000 0001223467889999999999999999996      9999 9999999


Q ss_pred             ecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCccccCCCc-h-HHHHHHHHHHHHHHHHHHH
Q 016430          306 LTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGLD-E-AVEAIEDALAVLLEALTTR  370 (389)
Q Consensus       306 L~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l~~~G~~-~-~a~~L~~~f~~fi~~~~a~  370 (389)
                      |.+...|+|++||+|.+++|||+||++++|+++         +.. + .++.|+++|+.|++.++..
T Consensus       145 l~~~~~s~y~lRk~~~~~~lsT~EAv~~~L~~l---------~~~~~~~~~~Ll~~f~~~~~~~~~~  202 (203)
T PF03942_consen  145 LKPSPPSFYRLRKQPKEGCLSTLEAVAYALKEL---------EEAPDEVADNLLDAFDAMVRRQQLA  202 (203)
T ss_pred             CCCCcccceeeEecCCCCCEeHHHHHHHHHHHh---------cchhHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998         334 3 4999999999999988754

Its function is unknown. The domain contains multiple conserved motifs including a DTXW motif that this domain has been named after.

>KOG4382 consensus Uncharacterized conserved protein, contains DTW domain [Function unknown]

Probab=99.86  E-value=1.1e-21  Score=184.21  Aligned_cols=183  Identities=16%  Similarity=0.156  Sum_probs=133.3

Q ss_pred             CCCCcCCcccccCCCCcccCCCcCccccCCcEEEEEeCCCcCCCCCChHHHHHHhcccCCeEEEEeccC-CChH---HHH
Q 016430          144 GSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVA-EDEE---IMW  219 (389)
Q Consensus       144 Gsr~~rC~~C~lp~~~CiC~~ip~~~L~~~~r~~LLmHp~E~~rpsNTGrLla~~L~~~~~~i~~~Gr~-e~e~---~l~  219 (389)
                      |.|+..|+.|-+|...|+|..+|...+.+.+.++|||||.|-+++.||.+|+...|.  +..+.++.+. +...   +-.
T Consensus        17 ~~rR~~C~~CdrP~~lClC~~lp~p~~~~~~~I~ILqHp~E~kh~LnTt~il~lgL~--n~v~~V~~~~~f~~hv~~ag~   94 (276)
T KOG4382|consen   17 GTRRPTCPSCDRPSQLCLCKKLPSPCFDNQVSITILQHPLERKHALNTTRILRLGLK--NVVFDVHDEAEFLIHVIGAGC   94 (276)
T ss_pred             CcCCCCCCccCCCceeEEecCCCCCCcCCcceEEEeeCchHhhhhcchhhHHHhccc--cceeecccchhhhheeccCCc
Confidence            889999999999999999999998777899999999999999999999999999984  5555553111 1100   001


Q ss_pred             HHHHhcCCCCeEEEc--cCCCccccccccccCCCCCCCccCCCCCCCCCCceeEEEEcCChHHHHHHHHHhhhhccCccc
Q 016430          220 SAFKRAGKSKVWCLY--PNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAKTVWD  297 (389)
Q Consensus       220 ~~L~~dp~~~~~LLF--P~e~A~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~IlLDGTW~QArKMfrrip~~akSp~L  297 (389)
                      +.+.  ...+.++++  |+++|.++...... +.++ +     ......-+..+|+|||||++||.|+.-      |+.+
T Consensus        95 s~i~--~~p~~~l~~~~ps~dsv~l~e~~~~-~~l~-~-----~~~~~~~p~~ll~id~Tw~~ak~l~~~------S~~~  159 (276)
T KOG4382|consen   95 SKID--TNPLDSLYRVEPSDDSVKLGESGNV-ENLE-S-----EKNVVLVPHGLLEIDETWNLAKHLSEI------SYRD  159 (276)
T ss_pred             cccC--CCcceeeeecCCCCCceeecccccc-cccc-c-----cccccCCCceeEEEccchHHHHHHHhh------cHHH
Confidence            1121  223456666  78888887654211 0000 0     001123357899999999999999984      6666


Q ss_pred             cCCCc-------------eEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCcc
Q 016430          298 EEDIP-------------CISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKF  344 (389)
Q Consensus       298 ~~~LP-------------~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l  344 (389)
                       ..+.             .|+...-..|.|.||++|..+||||+|++|.+|..++..++|
T Consensus       160 -~R~r~~i~~~~d~~~~~~vk~g~I~~s~~~lr~ep~~gclst~e~~A~cla~~e~~~~~  218 (276)
T KOG4382|consen  160 -SRVRDKISYEEDLIKICMVKHGVISNSSHSLRLEPNVGCLSTDEILASCLAMDELAKGF  218 (276)
T ss_pred             -HhhhhhhhhhhhhhhhhhhcceeEeeceeEEEecCCCccchHHHHHHHHHHHHhhcchh
Confidence             5555             444445567889999999999999999999999998766665

>KOG3795 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.52  E-value=7.9e-15  Score=133.87  Aligned_cols=174  Identities=16%  Similarity=0.149  Sum_probs=133.7

Q ss_pred             HHhhhhhhhcCCCCcCCcccccCCCCcccCCCcCccccCCcEEEEEeCCCcCCCCCChHHHHHHhcccCCeEEEEeccCC
Q 016430          134 TARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAE  213 (389)
Q Consensus       134 ~AR~~~~~l~Gsr~~rC~~C~lp~~~CiC~~ip~~~L~~~~r~~LLmHp~E~~rpsNTGrLla~~L~~~~~~i~~~Gr~e  213 (389)
                      ..|-.|..|-|||..+|+.|..|.. -.=..+|.+  +.+.+|.|+.||+|...+|...+  |.+|+++.+.|+.+  +.
T Consensus        13 eGRs~C~~C~~SRkFfCY~C~VPV~-vp~E~~P~v--kLPL~vDIIKHp~E~DGKSsAiH--AkiLAP~~VrI~Ty--P~   85 (230)
T KOG3795|consen   13 EGRSTCPGCKSSRKFFCYDCRVPVP-VPGEFTPTV--KLPLAVDIIKHPMEKDGKSSALH--AKILAPDQVRIFTY--PN   85 (230)
T ss_pred             cccccCCCCCCcceEEEEeeccccC-cchhccccc--ccceeeeeecCccccCCchhhhh--hhhcCcceeeeecc--CC
Confidence            4454444456799999999999988 455677765  48999999999999999998766  77887677777654  33


Q ss_pred             ChHHHHHHHHhcCCCCeEEEccCCCccccccccccCCCCCCCccCCCCCCCCCCceeEEEEcCChHHHHHHHHHhhhhcc
Q 016430          214 DEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNFVLIDGTWSNSAAMFNRLKEKAK  293 (389)
Q Consensus       214 ~e~~l~~~L~~dp~~~~~LLFP~e~A~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~IlLDGTW~QArKMfrrip~~ak  293 (389)
                      ..+.  +.-..+..-.+.+.||+..|...+...                ...|.....|+||.||.|.+-|+.       
T Consensus        86 IPdY--~~~~~~~~~~ta~~~p~~~a~~v~~~i----------------~~~gpi~r~v~~d~tw~q~~~~~~-------  140 (230)
T KOG3795|consen   86 IPDY--SQDSEDERQGTAIIFPSKSAISVEEFV----------------KTRGPIKRIVVLDCTWFQVGVMQK-------  140 (230)
T ss_pred             Ccch--hhcCCceEEEEEEeechhhhhhHHHHh----------------ccCCCeeEEEEEeceehhhcceec-------
Confidence            3222  111111222489999999998865431                123556789999999999999998       


Q ss_pred             CccccCCCceEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhc
Q 016430          294 TVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQL  340 (389)
Q Consensus       294 Sp~L~~~LP~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~  340 (389)
                      .|.. ++|..|+|..-.+.+|+-.+...+..|.|+||+.+.|.+.+.
T Consensus       141 ~~~i-~gl~~v~lq~~~s~fwr~q~~~p~~~latieai~~~l~e~~~  186 (230)
T KOG3795|consen  141 TPQI-QGLQHVSLQSYRTAFWRPQHNVPETGLATIEAIYYSLREYQE  186 (230)
T ss_pred             Cccc-cceeeeehhhHHHHhcccccCCchhhHhHHHHHHHHHHHHHH
Confidence            6888 999999999988999998888888999999999999998743

>PRK02287 hypothetical protein; Provisional

Probab=97.90  E-value=2.1e-05  Score=72.50  Aligned_cols=73  Identities=18%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             ceeEEEEcCChHHHHHHHHHhhhhccCccccCCCceEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCccccC
Q 016430          268 TLNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSC  347 (389)
Q Consensus       268 ~~~~IlLDGTW~QArKMfrrip~~akSp~L~~~LP~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l~~~  347 (389)
                      ...+++||+||+++.+|+.+...   . -- ..||-+-  ...+.+|.     ++..|||+||.|.+|-.+         
T Consensus        62 ~~Gi~vlDcSW~~~~~~~~~~~~---~-~~-R~LP~Lv--AaNPvNYG-----kp~kLs~vEAlAaaLyI~---------  120 (171)
T PRK02287         62 KRGIVALDCSWNEAERVFFKLLR---G-HH-RRLPFLV--AANPVNYG-----KPFKLSSVEALAAALYIL---------  120 (171)
T ss_pred             hCCEEEEECCHHHHhhhhhhccC---C-Cc-ccCcccc--ccCCCcCC-----CcccccHHHHHHHHHHHc---------
Confidence            34599999999999999986221   0 01 2355422  46677786     457999999999999996         


Q ss_pred             CCchHHHHHHHHHH
Q 016430          348 GLDEAVEAIEDALA  361 (389)
Q Consensus       348 G~~~~a~~L~~~f~  361 (389)
                      |..++++.|+..|.
T Consensus       121 G~~~~A~~ll~~F~  134 (171)
T PRK02287        121 GFKEEAEKILSKFK  134 (171)
T ss_pred             CCHHHHHHHHhhCC
Confidence            99999999988773

>PF04034 DUF367: Domain of unknown function (DUF367); InterPro: IPR007177 This domain is found in a family of proteins of unknown function

Probab=96.71  E-value=0.004  Score=54.98  Aligned_cols=70  Identities=17%  Similarity=0.271  Sum_probs=54.5

Q ss_pred             eEEEEcCChHHHHHHHHHhhhhccCccccCCCceEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCccccCCC
Q 016430          270 NFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCGL  349 (389)
Q Consensus       270 ~~IlLDGTW~QArKMfrrip~~akSp~L~~~LP~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l~~~G~  349 (389)
                      -+.+||.+|+++..+|.+++    ++.. ..||-+-  ...+-.|.     ++..|||+||.|.+|-.+         |.
T Consensus        23 Gi~viDCSW~~l~~~f~k~~----~~~~-R~LP~Lv--AaNPVNYG-----kP~kLscvEAlAAaLyI~---------G~   81 (127)
T PF04034_consen   23 GIAVIDCSWNRLDEVFKKLR----SRNH-RLLPYLV--AANPVNYG-----KPCKLSCVEALAAALYIL---------GF   81 (127)
T ss_pred             CEEEEECcHHHHHHHHHhcC----CCCC-ccCchhh--ccCCcccC-----CcccccHHHHHHHHHHHc---------CC
Confidence            58999999999999988753    3443 4577633  34556674     357899999999999996         99


Q ss_pred             chHHHHHHHHH
Q 016430          350 DEAVEAIEDAL  360 (389)
Q Consensus       350 ~~~a~~L~~~f  360 (389)
                      .++++.|+..|
T Consensus        82 ~~~A~~lL~~F   92 (127)
T PF04034_consen   82 KEQAEELLSKF   92 (127)
T ss_pred             HHHHHHHHhcC
Confidence            99999998766

It appears to be found in eukaryotes and archaebacteria, and occurs associated with a potential metal-binding region in RNase L inhibitor, RLI (IPR007209 from INTERPRO).

>COG2042 Uncharacterized conserved protein [Function unknown]

Probab=96.17  E-value=0.0088  Score=55.19  Aligned_cols=72  Identities=13%  Similarity=0.257  Sum_probs=54.5

Q ss_pred             eeEEEEcCChHHHHHHHHHhhhhccCccccCCCceEEecCCCCccccccCCCCCCCchHHHHHHHHHHHhhcCCccccCC
Q 016430          269 LNFVLIDGTWSNSAAMFNRLKEKAKTVWDEEDIPCISLTMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLLPKFSSCG  348 (389)
Q Consensus       269 ~~~IlLDGTW~QArKMfrrip~~akSp~L~~~LP~vsL~~~~~S~Y~LRkqp~~~~LSTaEAaa~lL~~L~~~~~l~~~G  348 (389)
                      --+.+||++|.++.++|..|+.    +.- ..||-+-  ...+-.|.     ....|||+||.|.+|-.+         |
T Consensus        71 ~Gi~vvdcSW~~~~~~f~~l~~----~~~-R~LP~Lv--AaNPVNYG-----kp~kLss~EAlaAaLYI~---------G  129 (179)
T COG2042          71 FGITVVDCSWNRVERVFKKLRG----REH-RRLPFLV--AANPVNYG-----KPFKLSSAEALAAALYIV---------G  129 (179)
T ss_pred             cCeEEEEccHHHHHHHHHhcCc----ccc-ccccHhh--hcCCcccC-----CcchhchHHHHHHHHHHh---------C
Confidence            4589999999999999987653    222 4466543  24456664     357999999999999996         8


Q ss_pred             CchHHHHHHHHHH
Q 016430          349 LDEAVEAIEDALA  361 (389)
Q Consensus       349 ~~~~a~~L~~~f~  361 (389)
                      ..+.|..|+..|.
T Consensus       130 ~~deA~~lls~F~  142 (179)
T COG2042         130 FKDEASELLSKFK  142 (179)
T ss_pred             cHHHHHHHHhhCc
Confidence            8888988887763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00