Citrus Sinensis ID: 016563

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGDNY
cHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccEEEEEEccccEEEEcccccccccccccccccHHHHHHHHcccEEEcccHHHHHHHHHHccccEEEEcccccHHHcccHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
cHHHHHHHHcccccccccccccccccEEEEccccccccccHHcccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccEEEccEEccccccHHHHHHHcccccccEEEEEccccEEEEEcccccHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccccccEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccccEccccEEEEHHHHHcccccccccEcccccEEEEEEcEEEccEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccc
MQILMRKLLQRISCrqvngrraystkkfvdsgqptpashpqlmkegeitpgisaEEYISRRKRLLEILPENSVAILAAApekmmtdvvpypyrqdanylyitgcqqpggvavLSHEcglcmfmpetsahdviwkgqiagvdaapetfkadkaypmsKIQEILPdmigrssklfhnQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTmlhskshpyeGLLAAKFEYECKMRgaqrmafnpvvgggpnaAVIHYsrndqkiddgdlvLMDVGCELhgyvsdmtrtwppcgsfssLEEALYDLILQTNKECLelcmpgtsllqiHHYSVGMLRKGLKeigivnsdgtdpynelnptsigdny
mqilmrkllqriscrqvngrraystkkfvdsgqptpashpqlmkegeitpgISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGivnsdgtdpynelnptsigdny
MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGDNY
*******LLQRISCRQ***************************************EYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVN*******************
*****************************DSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTN**********GAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGDN*
MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGDNY
*QILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSI****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGDNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q5R9W8507 Probable Xaa-Pro aminopep yes no 0.873 0.666 0.354 2e-65
Q9NQH7507 Probable Xaa-Pro aminopep yes no 0.873 0.666 0.349 1e-64
B7ZMP1506 Probable Xaa-Pro aminopep yes no 0.873 0.667 0.349 3e-64
B5DEQ3506 Probable Xaa-Pro aminopep yes no 0.873 0.667 0.349 6e-64
Q54T46518 Probable Xaa-Pro aminopep yes no 0.917 0.685 0.340 4e-56
Q10439486 Intermediate cleaving pep yes no 0.919 0.732 0.321 6e-54
P40051511 Intermediate cleaving pep yes no 0.917 0.694 0.313 7e-50
P15034441 Xaa-Pro aminopeptidase OS N/A no 0.811 0.712 0.329 2e-45
P44881430 Xaa-Pro aminopeptidase OS yes no 0.808 0.727 0.293 4e-45
Q96WX8 465 Probable Xaa-Pro aminopep no no 0.700 0.582 0.273 7e-29
>sp|Q5R9W8|XPP3_PONAB Probable Xaa-Pro aminopeptidase 3 OS=Pongo abelii GN=XPNPEP3 PE=2 SV=1 Back     alignment and function desciption
 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 205/358 (57%), Gaps = 20/358 (5%)

Query: 32  GQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPE--------NSVAILAAAPEKM 83
           GQP+P +HP L++ GE+TPG+S  EY  RR +L+ ++ +        +   ++ + P   
Sbjct: 47  GQPSPFTHPHLLRPGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYY 106

Query: 84  MTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECG-------LCMFMPETSAHDVIWKGQ 136
           M++ +PY + QD N+LY+ G Q+P  + VL    G         +F+P       +W G 
Sbjct: 107 MSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGP 166

Query: 137 IAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQ-----K 191
            +G D A      D+AY + + Q +LP M   ++ ++++         + +  Q     K
Sbjct: 167 RSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAK 226

Query: 192 ADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKF 251
           A     VR + +L   LR +KSPAE++ M+ +  +  QA ++TM  SK+   EG L AKF
Sbjct: 227 AKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFASKAPVEEGFLYAKF 286

Query: 252 EYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRT 311
           E+EC+ RGA  +A+ PVV GG  +  +HY +N+Q I DG++VL+D GCE   YVSD+TRT
Sbjct: 287 EFECRARGADILAYPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRT 346

Query: 312 WPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNS 369
           WP  G F++ +  LY+ IL+  ++CL LC PGTSL  I+   + ++ + LK++GI+ +
Sbjct: 347 WPVNGRFTAPQAELYEAILEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKN 404

Pongo abelii (taxid: 9601)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q9NQH7|XPP3_HUMAN Probable Xaa-Pro aminopeptidase 3 OS=Homo sapiens GN=XPNPEP3 PE=1 SV=1 Back     alignment and function description
>sp|B7ZMP1|XPP3_MOUSE Probable Xaa-Pro aminopeptidase 3 OS=Mus musculus GN=Xpnpep3 PE=2 SV=1 Back     alignment and function description
>sp|B5DEQ3|XPP3_RAT Probable Xaa-Pro aminopeptidase 3 OS=Rattus norvegicus GN=Xpnpep3 PE=1 SV=1 Back     alignment and function description
>sp|Q54T46|XPP3_DICDI Probable Xaa-Pro aminopeptidase 3 OS=Dictyostelium discoideum GN=xpnpep3 PE=2 SV=1 Back     alignment and function description
>sp|Q10439|ICP55_SCHPO Intermediate cleaving peptidase 55 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=icp55 PE=3 SV=2 Back     alignment and function description
>sp|P40051|ICP55_YEAST Intermediate cleaving peptidase 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICP55 PE=1 SV=1 Back     alignment and function description
>sp|P15034|AMPP_ECOLI Xaa-Pro aminopeptidase OS=Escherichia coli (strain K12) GN=pepP PE=1 SV=2 Back     alignment and function description
>sp|P44881|AMPP_HAEIN Xaa-Pro aminopeptidase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=pepP PE=3 SV=1 Back     alignment and function description
>sp|Q96WX8|AMPP3_EMENI Probable Xaa-Pro aminopeptidase pepP OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pepP PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
225450545486 PREDICTED: probable Xaa-Pro aminopeptida 0.992 0.790 0.730 1e-170
224124998484 predicted protein [Populus trichocarpa] 0.992 0.793 0.729 1e-168
255542934487 xaa-pro dipeptidase, putative [Ricinus c 0.987 0.784 0.725 1e-166
356575333479 PREDICTED: probable Xaa-Pro aminopeptida 0.992 0.801 0.716 1e-158
297843720480 hypothetical protein ARALYDRAFT_471021 [ 0.987 0.795 0.684 1e-158
449453996483 PREDICTED: probable Xaa-Pro aminopeptida 0.992 0.795 0.674 1e-157
449490802483 PREDICTED: LOW QUALITY PROTEIN: probable 0.992 0.795 0.674 1e-156
26450001480 unknown protein [Arabidopsis thaliana] 0.987 0.795 0.682 1e-156
30681070 493 metallopeptidase M24-like protein [Arabi 0.987 0.774 0.682 1e-156
356533531462 PREDICTED: probable Xaa-Pro aminopeptida 0.953 0.798 0.727 1e-155
>gi|225450545|ref|XP_002281646.1| PREDICTED: probable Xaa-Pro aminopeptidase 3 [Vitis vinifera] gi|296089797|emb|CBI39616.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 282/386 (73%), Positives = 330/386 (85%), Gaps = 2/386 (0%)

Query: 1   MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISR 60
           MQIL RKLLQR S  Q  GR  Y +K  VD+GQPTPASHPQL+ EGEITPGI++EEY+SR
Sbjct: 1   MQILRRKLLQRSSFIQGVGRCGYCSKNIVDAGQPTPASHPQLLNEGEITPGITSEEYVSR 60

Query: 61  RKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLC 120
           RKRLLE+LPENS+AI+A+AP KMMTDVVPY +RQDA+Y Y+TGCQQPGG+AVL HECGLC
Sbjct: 61  RKRLLELLPENSLAIVASAPVKMMTDVVPYTFRQDADYSYLTGCQQPGGIAVLGHECGLC 120

Query: 121 MFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAV 180
           MFMPE+  HDVIW+GQIAGVD A +TFKA+KAYPMSK++EILP M+GRSSKL HN +TA+
Sbjct: 121 MFMPESHPHDVIWQGQIAGVDTALDTFKAEKAYPMSKLKEILPGMMGRSSKLVHNVKTAI 180

Query: 181 QTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKS 240
            TY  +EAFQKA + G V++LS  THELRWVKSPAELKL+RESASI CQALLQTM HSK+
Sbjct: 181 PTYMEMEAFQKAAYSGKVKDLSVYTHELRWVKSPAELKLLRESASIACQALLQTMFHSKT 240

Query: 241 HPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCE 300
           +PYE +L+AK EYECKMRGAQRMAFNPVVGGGPNA+VIHYSRNDQK+ DGDLVLMD+GCE
Sbjct: 241 YPYESMLSAKVEYECKMRGAQRMAFNPVVGGGPNASVIHYSRNDQKVKDGDLVLMDIGCE 300

Query: 301 LHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKG 360
           LHGY+SD+TRTWPPCG FS+ +  LYDLIL+TNKEC++LC PGTS+ QIHHYS   L  G
Sbjct: 301 LHGYLSDLTRTWPPCGFFSAAQRELYDLILETNKECVKLCRPGTSIRQIHHYSAEKLLHG 360

Query: 361 LKEIGIVNSDGT--DPYNELNPTSIG 384
           LKE+GI+         Y++LNPT+IG
Sbjct: 361 LKELGILKDSRNIYHSYHQLNPTNIG 386

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224124998|ref|XP_002319477.1| predicted protein [Populus trichocarpa] gi|222857853|gb|EEE95400.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542934|ref|XP_002512530.1| xaa-pro dipeptidase, putative [Ricinus communis] gi|223548491|gb|EEF49982.1| xaa-pro dipeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356575333|ref|XP_003555796.1| PREDICTED: probable Xaa-Pro aminopeptidase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|297843720|ref|XP_002889741.1| hypothetical protein ARALYDRAFT_471021 [Arabidopsis lyrata subsp. lyrata] gi|297335583|gb|EFH66000.1| hypothetical protein ARALYDRAFT_471021 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449453996|ref|XP_004144742.1| PREDICTED: probable Xaa-Pro aminopeptidase 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449490802|ref|XP_004158711.1| PREDICTED: LOW QUALITY PROTEIN: probable Xaa-Pro aminopeptidase 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|26450001|dbj|BAC42121.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30681070|ref|NP_172401.2| metallopeptidase M24-like protein [Arabidopsis thaliana] gi|332190305|gb|AEE28426.1| metallopeptidase M24-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356533531|ref|XP_003535317.1| PREDICTED: probable Xaa-Pro aminopeptidase 3-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2203038 493 AT1G09300 [Arabidopsis thalian 0.987 0.774 0.682 2.3e-142
ZFIN|ZDB-GENE-040426-2076510 xpnpep3 "X-prolyl aminopeptida 0.881 0.668 0.364 5.1e-58
DICTYBASE|DDB_G0282075518 xpnpep3 "peptidase M24 family 0.917 0.685 0.348 2.1e-52
POMBASE|SPAC12B10.05486 icp55 "mitochondrial intermedi 0.919 0.732 0.321 1.9e-51
UNIPROTKB|E2RB50507 XPNPEP3 "Uncharacterized prote 0.788 0.601 0.349 1.7e-50
UNIPROTKB|E1BNA2507 XPNPEP3 "Uncharacterized prote 0.777 0.593 0.350 3.6e-50
UNIPROTKB|Q9NQH7507 XPNPEP3 "Probable Xaa-Pro amin 0.772 0.589 0.349 7.4e-50
MGI|MGI:2445217506 Xpnpep3 "X-prolyl aminopeptida 0.772 0.590 0.349 9.5e-50
RGD|1589063506 Xpnpep3 "X-prolyl aminopeptida 0.772 0.590 0.349 9.5e-50
UNIPROTKB|G3V9W4506 Xpnpep3 "Probable Xaa-Pro amin 0.772 0.590 0.349 9.5e-50
TAIR|locus:2203038 AT1G09300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
 Identities = 262/384 (68%), Positives = 317/384 (82%)

Query:     1 MQILMRKLLQRISCRQVNGRRAYSTKKFVDSGQPTPASHPQLMKEGEITPGISAEEYISR 60
             MQ L R L++R+S  QV  R AYST+   D GQPTPASHP LM EGE+TPGI  EEYI R
Sbjct:     1 MQFLARNLVRRVSRTQVVSRNAYSTQTVRDIGQPTPASHPHLMAEGEVTPGIRIEEYIGR 60

Query:    61 RKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLC 120
             RK+L+E+LPENS+AI+++AP KMMTDVVPY +RQDA+YLY+TGCQQPGGVAVLS E GLC
Sbjct:    61 RKKLVELLPENSLAIISSAPVKMMTDVVPYTFRQDADYLYLTGCQQPGGVAVLSDERGLC 120

Query:   121 MFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAV 180
             MFMPE++  D+ W+G++AGVDAA E FKAD+AYP+SK+ EIL DMI  SSK+FHN ++A 
Sbjct:   121 MFMPESTPKDIAWEGEVAGVDAASEVFKADQAYPISKLPEILSDMIRHSSKVFHNVQSAS 180

Query:   181 QTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKS 240
             Q YTNL+ FQ +   G V+ LS LTHELR +KSPAELKLMRESASI CQ LL+TMLHSK 
Sbjct:   181 QRYTNLDDFQNSASLGKVKTLSSLTHELRLIKSPAELKLMRESASIACQGLLKTMLHSKG 240

Query:   241 HPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCE 300
              P EG+L+A+ EYEC++RGAQRMAFNPVVGGG NA+VIHYSRNDQ+I DGDLVLMD+GCE
Sbjct:   241 FPDEGILSAQVEYECRVRGAQRMAFNPVVGGGSNASVIHYSRNDQRIKDGDLVLMDMGCE 300

Query:   301 LHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKG 360
             LHGYVSD+TRTWPPCG FSS++E LYDLILQTNKEC++ C PGT++ Q++ YS  +L  G
Sbjct:   301 LHGYVSDLTRTWPPCGKFSSVQEELYDLILQTNKECIKQCKPGTTIRQLNTYSTELLCDG 360

Query:   361 LKEIGIVNSDGTDPYNELNPTSIG 384
             L ++GI+ S     Y++LNPTSIG
Sbjct:   361 LMKMGILKSRRL--YHQLNPTSIG 382
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008235 "metalloexopeptidase activity" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0009987 "cellular process" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA
ZFIN|ZDB-GENE-040426-2076 xpnpep3 "X-prolyl aminopeptidase (aminopeptidase P) 3, putative" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0282075 xpnpep3 "peptidase M24 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC12B10.05 icp55 "mitochondrial intermediate cleavage peptidase Icp55 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|E2RB50 XPNPEP3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BNA2 XPNPEP3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NQH7 XPNPEP3 "Probable Xaa-Pro aminopeptidase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2445217 Xpnpep3 "X-prolyl aminopeptidase (aminopeptidase P) 3, putative" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1589063 Xpnpep3 "X-prolyl aminopeptidase (aminopeptidase P) 3, putative" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3V9W4 Xpnpep3 "Probable Xaa-Pro aminopeptidase 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00022580001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (486 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00036298001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (566 aa)
      • 0.642
GSVIVG00037495001
SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (193 aa)
•     • 0.638
rps2
ribosomal protein S2 (180 aa)
      • 0.596
GSVIVG00017221001
SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (583 aa)
      • 0.540
GSVIVG00022843001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (447 aa)
      • 0.525
GSVIVG00016648001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (505 aa)
      • 0.524
GSVIVG00015322001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (167 aa)
      • 0.523
GSVIVG00033342001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (203 aa)
      • 0.509
rps3
SubName- Full=Chromosome undetermined scaffold_3592, whole genome shotgun sequence; (207 aa)
      • 0.508
GSVIVG00001873001
SubName- Full=Chromosome undetermined scaffold_123, whole genome shotgun sequence; (540 aa)
•       0.503

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 2e-61
cd01087243 cd01087, Prolidase, Prolidase 7e-55
pfam05195134 pfam05195, AMP_N, Aminopeptidase P, N-terminal dom 4e-44
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 1e-41
smart01011135 smart01011, AMP_N, Aminopeptidase P, N-terminal do 6e-38
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 4e-33
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 2e-23
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 2e-16
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 8e-13
PRK13607 443 PRK13607, PRK13607, proline dipeptidase; Provision 2e-10
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 1e-07
cd01085224 cd01085, APP, X-Prolyl Aminopeptidase 2 2e-05
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 3e-05
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 4e-05
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 1e-04
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 2e-04
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 2e-04
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 6e-04
COG5406 1001 COG5406, COG5406, Nucleosome binding factor SPN, S 0.003
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information 
 Score =  203 bits (519), Expect = 2e-61
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 39/345 (11%)

Query: 52  ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVA 111
           ++ +E+  RR+ LL  +   S A++ AAPE   +    YPYRQ++++ Y TG  +P  V 
Sbjct: 1   MTQQEFQRRRQALLAKMQPGSAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPEAVL 60

Query: 112 VLSHECGLCMFMPETSAHDV-----------IWKGQIAGVDAAPETFKADKAYPMSKIQE 160
           VL           +T  H V           IW G+  G DAAPE    D+A P S+I +
Sbjct: 61  VLIKS-------DDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQ 113

Query: 161 ILPDMIGRSSKLFHNQ-ETAVQ---TYTNLEAFQKADFYGAVRNLS---RLT------HE 207
            L  ++     ++H Q E A      ++ LE  +K    G+ +NL+    LT      HE
Sbjct: 114 QLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRK----GSRQNLTAPATLTDWRPWVHE 169

Query: 208 LRWVKSPAELKLMRESASIGCQALLQTMLHSKSHP--YEGLLAAKFEYECKMRGAQRMAF 265
           +R  KSP E+ ++R +  I   A  + M   K  P  +E  L  +  +E    GA+  ++
Sbjct: 170 MRLFKSPEEIAVLRRAGEISALAHTRAM--EKCRPGMFEYQLEGEIHHEFNRHGARYPSY 227

Query: 266 NPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEAL 325
           N +VG G N  ++HY+ N+ ++ DGDLVL+D GCE  GY  D+TRT+P  G F+  +  +
Sbjct: 228 NTIVGSGENGCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREI 287

Query: 326 YDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370
           YD++L++ +  L L  PGTS+ ++    V ++  GL ++GI+  D
Sbjct: 288 YDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGD 332

Length = 438
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|218491 pfam05195, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|198079 smart01011, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|237444 PRK13607, PRK13607, proline dipeptidase; Provisional Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|238518 cd01085, APP, X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|227693 COG5406, COG5406, Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK13607 443 proline dipeptidase; Provisional 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
KOG2737 492 consensus Putative metallopeptidase [General funct 100.0
PRK09795361 aminopeptidase; Provisional 100.0
PRK14575406 putative peptidase; Provisional 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK15173323 peptidase; Provisional 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.97
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.97
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 99.97
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 99.97
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.97
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.96
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 99.95
PTZ00053 470 methionine aminopeptidase 2; Provisional 99.95
TIGR00501 295 met_pdase_II methionine aminopeptidase, type II. M 99.95
PRK08671 291 methionine aminopeptidase; Provisional 99.95
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.94
KOG2413 606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.92
COG0024255 Map Methionine aminopeptidase [Translation, riboso 99.9
PF05195134 AMP_N: Aminopeptidase P, N-terminal domain; InterP 99.9
KOG2738369 consensus Putative methionine aminopeptidase [Post 99.9
KOG1189 960 consensus Global transcriptional regulator, cell d 99.88
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.76
PF01321132 Creatinase_N: Creatinase/Prolidase N-terminal doma 99.35
KOG2776 398 consensus Metallopeptidase [General function predi 99.19
KOG2775 397 consensus Metallopeptidase [General function predi 99.07
PF14826163 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-term 97.33
cd01066207 APP_MetAP A family including aminopeptidase P, ami 94.81
KOG2413 606 consensus Xaa-Pro aminopeptidase [Amino acid trans 94.44
PRK05716252 methionine aminopeptidase; Validated 92.93
PRK08671291 methionine aminopeptidase; Provisional 92.87
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 92.81
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 92.59
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 92.26
PLN03158396 methionine aminopeptidase; Provisional 91.6
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 91.58
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 91.53
PRK12896255 methionine aminopeptidase; Reviewed 91.29
COG0024255 Map Methionine aminopeptidase [Translation, riboso 90.63
cd01091243 CDC68-like Related to aminopeptidase P and aminope 90.53
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 90.21
PRK12897248 methionine aminopeptidase; Reviewed 90.04
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 89.82
PRK12318291 methionine aminopeptidase; Provisional 89.64
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 89.15
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 88.07
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 87.37
PTZ00053470 methionine aminopeptidase 2; Provisional 87.26
PRK09795361 aminopeptidase; Provisional 86.6
PRK07281286 methionine aminopeptidase; Reviewed 86.32
KOG2738 369 consensus Putative methionine aminopeptidase [Post 86.13
PRK15173323 peptidase; Provisional 83.46
PRK14576405 putative endopeptidase; Provisional 81.15
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 80.93
PRK14575406 putative peptidase; Provisional 80.77
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-86  Score=616.09  Aligned_cols=359  Identities=43%  Similarity=0.777  Sum_probs=326.8

Q ss_pred             cccCCCCCCCCCCcCccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEecCCcccccCCcCCCccCCCceeeecCCCCC
Q 016563           28 FVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQP  107 (387)
Q Consensus        28 ~~~~~qp~~~t~p~~~~~~~~tp~i~~~ey~~R~~~L~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YlTG~~~p  107 (387)
                      ..+.|||++.|||||++|||+||||++.||+.||.||++.++++.++|+.+++++||+|++||+|||++||+||||+.+|
T Consensus        38 ~~~~GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP  117 (488)
T KOG2414|consen   38 KGNLGQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANAMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEP  117 (488)
T ss_pred             ccccCCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCcccEEEEccCchhhhcCccceeeecCCCeEEEeccCCC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEec-C---CeEEEEecCCCCccccccCccCChhhhhhHhCCccccchhhHHHHHHHhhcCCCeEEEcCCcchhhh
Q 016563          108 GGVAVLSH-E---CGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTY  183 (387)
Q Consensus       108 ~~~lvi~~-~---~~~~l~v~~~~~~~~~w~~~~~~~~~~~~~~~~d~~~~~~~l~~~L~~~~~~~~~I~~d~~~~~~~~  183 (387)
                      ++++++.+ |   ....+|+|++++..+.|+|+|.|.+++..+|++|+..+.+.+..+|.+.......|+.|..+.. ..
T Consensus       118 ~~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ss~-a~  196 (488)
T KOG2414|consen  118 DAVLLLLKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKASSK-AS  196 (488)
T ss_pred             CeeEEEeecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhccch-hh
Confidence            99999974 1   2478999999999999999999999999999999999999999999988766667887764322 12


Q ss_pred             hHHHH---HHhhc-cCCceechHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcC
Q 016563          184 TNLEA---FQKAD-FYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRG  259 (387)
Q Consensus       184 ~~~~~---l~~~~-~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~~~~G~tE~el~a~l~~~~~~~G  259 (387)
                      ..++.   |.... ...++++++.+++++|.||||+|+++||+||.|+++++...|-.-|++.+|..|.+.++|+++.+|
T Consensus       197 s~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rG  276 (488)
T KOG2414|consen  197 SALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRG  276 (488)
T ss_pred             hHHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecC
Confidence            22333   33222 123589999999999999999999999999999999999998888999999999999999999999


Q ss_pred             CCCCCCcceEecCCCCccccccCCCCccCCCCEEEEEeceeeCCeeeceeEEeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016563          260 AQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLEL  339 (387)
Q Consensus       260 ~~~~~~~~ivasG~~a~~~H~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~  339 (387)
                      |+..+|+||||+|.|+.++||+.||+.+++||+||+|+||+++||+||||||||++|+||+.|+++|++++++|+.||..
T Consensus       277 ad~~AYpPVVAgG~na~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~  356 (488)
T KOG2414|consen  277 ADRLAYPPVVAGGKNANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKY  356 (488)
T ss_pred             ccccccCCeeecCcccceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC--CCCHHHHHHHHHHHHHHHHHhcCccCCCCCC--ccccccccCCCCCC
Q 016563          340 CMP--GTSLLQIHHYSVGMLRKGLKEIGIVNSDGTD--PYNELNPTSIGDNY  387 (387)
Q Consensus       340 ~kp--G~~~~di~~~~~~~l~~~l~~~g~~~~~~~~--~~~~~~~H~iGH~l  387 (387)
                      |+|  |.++++||..+.+.+.++|+++|+.+...+.  ...+++|||+||+|
T Consensus       357 c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyL  408 (488)
T KOG2414|consen  357 CKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYL  408 (488)
T ss_pred             hcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhc
Confidence            999  9999999999999999999999986654210  34789999999996

>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3 Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 6e-47
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 6e-47
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 6e-47
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 1e-46
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 1e-46
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 1e-46
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 1e-46
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 8e-46
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 1e-45
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 1e-45
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 2e-45
3ig4_A427 Structure Of A Putative Aminopeptidase P From Bacil 5e-29
2iw2_A 494 Crystal Structure Of Human Prolidase Length = 494 1e-21
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 2e-19
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 6e-19
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 1e-13
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 3e-12
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 9e-12
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 4e-11
3rva_A 451 Crystal Structure Of Organophosphorus Acid Anhydrol 3e-07
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 2e-06
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure 
Iteration: 1

 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 180/337 (53%), Gaps = 23/337 (6%)
Query: 52  ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVA 111
           IS +E+  RR+ L+E +   S A++ AAPE   +    YPYRQ++++ Y TG  +P  V 
Sbjct: 3   ISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVL 62
Query: 112 VL-----SHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMI 166
           VL     +H   + +F         IW G+  G DAAPE    D+A   S+I + L  ++
Sbjct: 63  VLIKSDDTHNHSV-LFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLL 121
Query: 167 GRSSKLFHNQ-ETA---VQTYTNLEAFQKADFYGAVRNLSR---------LTHELRWVKS 213
                ++H Q E A   V   + LE  +K    G+ +NL+          + HE+R  KS
Sbjct: 122 NGLDVVYHAQGEYAYADVIVNSALEKLRK----GSRQNLTAPATMIDWRPVVHEMRLFKS 177
Query: 214 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGP 273
           P E+ ++R +  I   A  + M   +   +E  L  +  +E    GA+  ++N +VG G 
Sbjct: 178 PEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGE 237
Query: 274 NAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTN 333
           N  ++HY+ N+ ++ DGDLVL+D GCE  GY  D+TRT+P  G F+  +  +YD++L++ 
Sbjct: 238 NGCILHYTENEXEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESL 297
Query: 334 KECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370
           +  L L  PGTS+L++    V ++  GL ++GI+  D
Sbjct: 298 ETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGD 334
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|3IG4|A Chain A, Structure Of A Putative Aminopeptidase P From Bacillus Anthracis Length = 427 Back     alignment and structure
>pdb|2IW2|A Chain A, Crystal Structure Of Human Prolidase Length = 494 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|3RVA|A Chain A, Crystal Structure Of Organophosphorus Acid Anhydrolase From Alteromonas Macleodii Length = 451 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 1e-125
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 1e-125
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 1e-110
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 4e-75
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 7e-75
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 2e-36
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 9e-36
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 1e-34
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 3e-34
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 4e-33
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 6e-33
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 8e-33
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 4e-29
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 5e-28
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 1e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 2e-06
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 5e-06
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-05
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 1e-05
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 1e-05
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 2e-05
3ctz_A 623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 3e-05
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 1e-04
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
 Score =  368 bits (947), Expect = e-125
 Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 13/332 (3%)

Query: 52  ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVA 111
           IS +E+  RR+ L+E +   S A++ AAPE   +    YPYRQ++++ Y TG  +P  V 
Sbjct: 3   ISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVL 62

Query: 112 VLSHECG----LCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIG 167
           VL           +F         IW G+  G DAAPE    D+A   S+I + L  ++ 
Sbjct: 63  VLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN 122

Query: 168 RSSKLFH----NQETAVQTYTNLEAFQKADFYGA-----VRNLSRLTHELRWVKSPAELK 218
               ++H         V   + LE  +K           + +   + HE+R  KSP E+ 
Sbjct: 123 GLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIA 182

Query: 219 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVI 278
           ++R +  I   A  + M   +   +E  L  +  +E    GA+  ++N +VG G N  ++
Sbjct: 183 VLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCIL 242

Query: 279 HYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLE 338
           HY+ N+ ++ DGDLVL+D GCE  GY  D+TRT+P  G F+  +  +YD++L++ +  L 
Sbjct: 243 HYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLR 302

Query: 339 LCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370
           L  PGTS+L++    V ++  GL ++GI+  D
Sbjct: 303 LYRPGTSILEVTGEVVRIMVSGLVKLGILKGD 334
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Length = 623 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3ctz_A 623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
4fuk_A 337 Methionine aminopeptidase; structural genomics con 100.0
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 99.97
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 99.97
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 99.97
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 99.97
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 99.95
3il0_A131 Aminopeptidase P; XAA-Pro aminopeptidase; structur 99.48
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.45
3pn9_A138 Proline dipeptidase; structural genomics, PSI-2, p 99.38
3i7m_A140 XAA-Pro dipeptidase; structural genomics, APC64794 99.37
3qoc_A135 Putative metallopeptidase; MCSG, PSI-2, structural 99.34
3ooo_A132 Proline dipeptidase; structural genomics, PSI-2, p 99.26
3o5v_A132 X-Pro dipeptidase; creatinase, N-terminal, PSI, MC 99.24
3ctz_A 623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 99.23
3ovk_A132 Aminopeptidase P, XAA-Pro dipeptidase; structural 99.21
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 90.92
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 90.69
3mx6_A262 Methionine aminopeptidase; seattle structural geno 90.06
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 89.81
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 89.57
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 89.19
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 88.8
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 88.49
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 86.51
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 86.45
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 85.59
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 85.19
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 84.87
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 84.12
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 84.01
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 82.61
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 82.03
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 81.97
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 81.8
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 80.15
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
Probab=100.00  E-value=1.9e-69  Score=535.32  Aligned_cols=333  Identities=24%  Similarity=0.435  Sum_probs=311.3

Q ss_pred             CHHHHHHHHHHHHHhCCCCeEEEEecCCcccccCCcCCCccCCCceeeecCCCCCCeEEEEecC---CeEEEEecCCCCc
Q 016563           53 SAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHE---CGLCMFMPETSAH  129 (387)
Q Consensus        53 ~~~ey~~R~~~L~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YlTG~~~p~~~lvi~~~---~~~~l~v~~~~~~  129 (387)
                      +.++|.+||++|++.|++++++|+.+++.+++++|++|+|||++||+|||||.+|++++++.++   ++.+||++++++.
T Consensus         2 ~~~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~lfv~~~~~~   81 (427)
T 3ig4_A            2 KSKFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPV   81 (427)
T ss_dssp             CHHHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTT
T ss_pred             CHHHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceEEEEecCCCcc
Confidence            5689999999999999999999999999999999999999999999999999999999999762   4689999999999


Q ss_pred             cccccCccCChhhhhhHhCCccccchhhHHHHHHHhhcC--CCeEEEcCCc------chhhhhHHHHHHhhccCCceech
Q 016563          130 DVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGR--SSKLFHNQET------AVQTYTNLEAFQKADFYGAVRNL  201 (387)
Q Consensus       130 ~~~w~~~~~~~~~~~~~~~~d~~~~~~~l~~~L~~~~~~--~~~I~~d~~~------~~~~~~~~~~l~~~~~~~~~~~~  201 (387)
                      .++|+|.|.+.+.+.+.+++|...+.+++.+.|.+++.+  ..+|+++...      ...+...++.|++.+|..+++++
T Consensus        82 ~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  161 (427)
T 3ig4_A           82 MEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPHVTIGNV  161 (427)
T ss_dssp             GGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCTTCEEEEC
T ss_pred             ceEEeCCCCcHHHHHhcCCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCCCCeEeEh
Confidence            999999999999999999999988999999999988765  6789998642      12345567788888998999999


Q ss_pred             HHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCcceEecCCCCcccccc
Q 016563          202 SRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYS  281 (387)
Q Consensus       202 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~~~~G~tE~el~a~l~~~~~~~G~~~~~~~~ivasG~~a~~~H~~  281 (387)
                      ++++.++|+|||++||+.||+|++++++++..+++.++||+||.||++.+++.+.++|+++++|+++|++|.|++.+||.
T Consensus       162 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~f~~ivasG~n~~~~H~~  241 (427)
T 3ig4_A          162 YPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKHHAFNTILASGKNATVLHYE  241 (427)
T ss_dssp             HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGGGSTTCC
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCCCEEEECccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999989999999999999999999


Q ss_pred             CCCCccCCCCEEEEEeceeeCCeeeceeEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Q 016563          282 RNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGL  361 (387)
Q Consensus       282 ~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~~~~~l~~~l  361 (387)
                      |++++|++||+|++|+|++|+||+||+||||+|+|+||++|+++|++|+++|+++++++|||++++|||.++++++.+.|
T Consensus       242 ~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~  321 (427)
T 3ig4_A          242 DNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGC  321 (427)
T ss_dssp             CCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhH
Confidence            99999999999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             HhcCccCCCCCCccccccccCCCCCC
Q 016563          362 KEIGIVNSDGTDPYNELNPTSIGDNY  387 (387)
Q Consensus       362 ~~~g~~~~~~~~~~~~~~~H~iGH~l  387 (387)
                      .++|+.++..  +++.||+|++||++
T Consensus       322 ~~~G~~~~~~--~~~~~~~Hg~GH~i  345 (427)
T 3ig4_A          322 KAVGLIQEDE--ELSKYYYHGVSHFL  345 (427)
T ss_dssp             HHHTSCSSGG--GGGGTCCSCSCCBC
T ss_pred             hhcCCccCcc--hhhccCCCCCCCcC
Confidence            9999977544  67899999999986
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae} Back     alignment and structure
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis} Back     alignment and structure
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae} Back     alignment and structure
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A* Back     alignment and structure
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d2v3za1176 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia c 2e-32
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 5e-18
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 1e-17
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 3e-13
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 5e-13
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 3e-09
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 3e-09
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 1e-05
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Length = 176 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Creatinase/prolidase N-terminal domain
family: Creatinase/prolidase N-terminal domain
domain: Aminopeptidase P
species: Escherichia coli [TaxId: 562]

 Score =  118 bits (296), Expect = 2e-32
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 13/174 (7%)

Query: 52  ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVA 111
           IS +E+  RR+ L+E +   S A++ AAPE   +    YPYRQ++++ Y TG  +P  V 
Sbjct: 3   ISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVL 62

Query: 112 VLSH----ECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIG 167
           VL           +F         IW G+  G DAAPE    D+A   S+I + L  ++ 
Sbjct: 63  VLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN 122

Query: 168 RSSKLFHN----QETAVQTYTNLEAFQKADFYGA-----VRNLSRLTHELRWVK 212
               ++H         V   + LE  +K           + +   + HE+R  K
Sbjct: 123 GLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFK 176
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 99.98
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 99.97
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 99.95
d2v3za1176 Aminopeptidase P {Escherichia coli [TaxId: 562]} 99.95
d1kp0a1156 Creatinase {Actinobacillus sp. [TaxId: 41114]} 99.49
d1chma1155 Creatinase {Pseudomonas putida [TaxId: 303]} 99.48
d1pv9a1117 Aminopeptidase P {Archaeon Pyrococcus furiosus [Ta 99.19
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 92.68
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 90.84
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 87.82
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 85.9
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 85.53
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 83.92
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=8e-37  Score=275.16  Aligned_cols=162  Identities=27%  Similarity=0.478  Sum_probs=156.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCcceEecCCCCccccccCCCCccCCCC
Q 016563          212 KSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGD  291 (387)
Q Consensus       212 Ks~~EI~~mr~A~~i~~~a~~~~~~~~~~G~tE~el~a~l~~~~~~~G~~~~~~~~ivasG~~a~~~H~~~~~~~l~~Gd  291 (387)
                      |||+||++||+|++++++++.++++.++||+||.||.+.++..+.+.|++..+|.+++++|.|+..+|+.++++++++||
T Consensus         1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~gd   80 (221)
T d1pv9a2           1 KTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKMNGAEKPAFDTIIASGHRSALPHGVASDKRIERGD   80 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGSTTCBCCSCBCCTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             EEEEEeceeeCCeeeceeEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHhcCccCCCC
Q 016563          292 LVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDG  371 (387)
Q Consensus       292 ~vlvD~g~~~~GY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~~~~~l~~~l~~~g~~~~~~  371 (387)
                      +|++|+|+.|+||++|++|||++ |+++++|+++|+++++++++++++||||++++||++++++.+++.           
T Consensus        81 ~v~id~~~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~~~-----------  148 (221)
T d1pv9a2          81 LVVIDLGALYNHYNSDITRTIVV-GSPNEKQREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIKEY-----------  148 (221)
T ss_dssp             EEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-----------
T ss_pred             eEEEecccccCccccCcceeeec-CCccHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHhhhhhc-----------
Confidence            99999999999999999999998 999999999999999999999999999999999999999998873           


Q ss_pred             CCccccccccCCCCCC
Q 016563          372 TDPYNELNPTSIGDNY  387 (387)
Q Consensus       372 ~~~~~~~~~H~iGH~l  387 (387)
                        ++..++.|++||++
T Consensus       149 --g~~~~~~~~~Ghg~  162 (221)
T d1pv9a2         149 --GYGDYFIHSLGHGV  162 (221)
T ss_dssp             --TCGGGCCSCSEEEC
T ss_pred             --ccCCceeccccCCC
Confidence              56778899999975
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]} Back     information, alignment and structure
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure