Citrus Sinensis ID: 016763

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
Protein Sequence
MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQKCDGQMSGLKQRPTYVPKRFSMGRI
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHEccccEEEEccEcccccccEEEEEEcEccccEEEEccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHccEEEEEEEcccccEEEcccccccEccccccccccccccEEEEccccccccccccccccccccccEEEEcccccccccccHHcccEcccccccccccccccccEEEEEcccccccEEEEcccccccccccccccccccccccccccHHcccccccHHHHHHHcHcHHHHHHcccccccccccccccccccccEEEEccc
Coil and Loop (DISEMBL)
mvartppkqrkvlaplnpvlLRETVKKVDKCMARLQELQYtvtggtkmisgvslsprstrgylrTSLRCkqeslriknatprkspkgkfpapaggewrgmslpamlVGETVGEILQATQFAREIVAAVATKtkkitiedpktpvtekrnhrpnpenteLRVRRKKEKQNKLqsirsesdspkrqRAQSrinfkvsppkvieldkennrylanrvsprnkpwtkktvlfpnplfratpsqqqkfcktrspviardkqplflstpssqqqklskirspvitrnkqttphkfliksppsaskfqvkiksppvisslsptrstnlskkspklstasklrrsfspsrlanrlvsplksrktvqkcdgqmsglkqrptyvpkrfsmgri
Flexible Loop (DISEMBL)
mvartppkqrkvlaplnpvllrETVKKVDKCMARLQElqytvtggtkmisgvslsprstrgylrtslrckqeslriknatprkspkgkfpapaggewRGMSLPAMLVGETVGEILQATQFAREIVAAVatktkkitiedpktpvtekrnhrpnpentelrvrrkkekqnklqsirsesdspkrqraqsrinfkvsppkvieldkennrylanrvsprnkpwtkkTVLFPnplfratpsqqqkfCKTRSPVIARDKQPlflstpssqqqklskirspvitrnkqttphkfliksppsaskfqvkiksppvisslsptrstnlskkspklstasklrrsfspsrlanrlvsplksrktvqkcdgqmsglkqrptyvpkrfsmgri
Low Complexity Region (SEG)
MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQKCDGQMSGLKQRPTYVPKRFSMGRI
Disordered region (IsUnstruct)
************LAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVS*******************************************WRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKIT************************************************************************************WTKKTVLFPNPLF******************************************************************************************************************************************************
Disordered Region (DISOPRED)
*************APLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLS****************************************EWRGMSLPAMLVGETVGEILQATQFA*****************************************************************************************************************************************************************************************************************************************************************S****
Disordered Region (DISEMBL)
********QRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKN*************PAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPK*********************************************QSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATP**********SPVIARDKQPLFL*************RSPVITRNKQTTPHKFLIKSPPSASKFQVKIKSPPV*********************************LANRLVSPL************MSGLKQRPTYVPKRFSMGRI
Disordered Region (DISPRO)
****TPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKNATP***P**K********WRGMSLPAMLVGETVGEILQATQFAREIVAAVATK*****************************************************RAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPS*QQKFCKTRSPVIARDKQPLFLST******K*SKIRSPVITRNKQTTPHKFLIKSPPSASKFQVK*K**************************************************************K*RPTYVPKRFS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQKCDGQMSGLKQRPTYVPKRFSMGRI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
224123202	370	predicted protein [Populus trichocarpa]	0.932	0.964	0.739	1e-154
224131532	357	predicted protein [Populus trichocarpa]	0.929	0.997	0.734	1e-150
255542628	359	conserved hypothetical protein [Ricinus	0.924	0.986	0.737	1e-148
359487739	357	PREDICTED: uncharacterized protein LOC10	0.911	0.977	0.682	1e-135
296088324	352	unnamed protein product [Vitis vinifera]	0.885	0.963	0.686	1e-131
356574945	357	PREDICTED: uncharacterized protein LOC10	0.898	0.963	0.664	1e-127
356533579	362	PREDICTED: uncharacterized protein LOC10	0.882	0.933	0.650	1e-123
147866344	1239	hypothetical protein VITISV_042629 [Viti	0.859	0.265	0.654	1e-121
357512001	429	Microtubule binding protein [Medicago tr	0.929	0.829	0.552	1e-108
150036249	430	microtubule binding protein [Cucumis mel	0.895	0.797	0.548	1e-107

>gi|224123202|ref|XP_002319019.1| predicted protein [Populus trichocarpa] gi|222857395|gb|EEE94942.1| predicted protein [Populus trichocarpa]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 293/396 (73%), Positives = 320/396 (80%), Gaps = 39/396 (9%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPP+QRK++APLNPVLLRETVKKV++CMARLQELQYTV GG K+I GVSLSPRSTR
Sbjct: 1   MVARTPPEQRKMVAPLNPVLLRETVKKVERCMARLQELQYTVAGGNKVIDGVSLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYLRTSLRCKQESLR K+  P+KSP GK PA + GEWR MSLPAMLVGETVGEILQA+QF
Sbjct: 61  GYLRTSLRCKQESLRTKSTAPKKSPVGKLPATSIGEWRRMSLPAMLVGETVGEILQASQF 120

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           AREIVAAVA KTKK T+EDPKTPVT++R  RP+PE+TEL+ RRKKEKQ KLQSIRSESDS
Sbjct: 121 AREIVAAVACKTKKSTLEDPKTPVTQQRKQRPHPEDTELKSRRKKEKQTKLQSIRSESDS 180

Query: 181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPS-Q 239
           P   RA+SRINFKVSPPK  E+DKEN RYLANRVSPRN+PW KKTVLFPNPLF +T S Q
Sbjct: 181 PCLLRARSRINFKVSPPKKSEVDKENARYLANRVSPRNRPWAKKTVLFPNPLFLSTDSTQ 240

Query: 240 QQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASK 299
           QQKFCKTRSPVIAR+K                          KQTTPHKFLIKSPPS SK
Sbjct: 241 QQKFCKTRSPVIARNK--------------------------KQTTPHKFLIKSPPSGSK 274

Query: 300 FQVKIKSPPVISSL-----------SPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLV 348
           FQVKIK+PPV+ SL           SPTR TNLS+KSPKLSTASKLRRSFSPSRLAN+LV
Sbjct: 275 FQVKIKNPPVVCSLSPTRPTNLSRKSPTRPTNLSRKSPKLSTASKLRRSFSPSRLANKLV 334

Query: 349 SPLKSRKTVQKCDGQ-MSGLKQRPTYVPKRFSMGRI 383
           SPLK RK V K DG  MSGLKQRP   P+RFS+GRI
Sbjct: 335 SPLKGRKIVLKSDGLIMSGLKQRPIATPRRFSLGRI 370

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131532|ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|222838278|gb|EEE76643.1| predicted protein [Populus trichocarpa]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/384 (73%), Positives = 314/384 (81%), Gaps = 28/384 (7%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQRK++ PL+PVL+RET+KKVD+CMARLQELQYTV GG K+I+GVSLSPRSTR
Sbjct: 1   MVARTPPKQRKMVVPLDPVLIRETLKKVDRCMARLQELQYTVAGGNKVIAGVSLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYLRTSLRCKQESLRIK+  P KSP GK PA + GEWR MSLPAMLVGET+GEILQA+QF
Sbjct: 61  GYLRTSLRCKQESLRIKSGVPMKSPVGKLPATSIGEWRRMSLPAMLVGETMGEILQASQF 120

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           AREIVAAV  KTKK+T+EDPKTP+T++R  RP+PE+TEL+ +RKKEKQ KLQSIRSE  S
Sbjct: 121 AREIVAAVCCKTKKLTLEDPKTPLTQQRKQRPHPEDTELKSKRKKEKQTKLQSIRSEFGS 180

Query: 181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQ 240
           P  QRA+SRINFKVSPPK  E+DKEN RYLANRVSPRN+PW KKTVLFPNPLF       
Sbjct: 181 PTLQRARSRINFKVSPPKKREMDKENARYLANRVSPRNRPWVKKTVLFPNPLF------- 233

Query: 241 QKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNK-QTTPHKFLIKSPPSASK 299
                              LST S+QQQK  K RSPVI RNK QTTPHKFLIKSPPS SK
Sbjct: 234 -------------------LSTDSAQQQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSK 274

Query: 300 FQVKIKSPPVISSLSPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQK 359
           FQVKIK+PPV+S LSPTR TNLSKKSPK STASK RRSFSPSRLA++L+SPLK RK VQK
Sbjct: 275 FQVKIKNPPVLS-LSPTRPTNLSKKSPKSSTASKFRRSFSPSRLAHKLMSPLKGRKIVQK 333

Query: 360 CDGQMSGLKQRPTYVPKRFSMGRI 383
            D  MSGLKQRP   P+RFS+GRI
Sbjct: 334 SDVLMSGLKQRPIATPRRFSLGRI 357

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542628|ref|XP_002512377.1| conserved hypothetical protein [Ricinus communis] gi|223548338|gb|EEF49829.1| conserved hypothetical protein [Ricinus communis]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/388 (73%), Positives = 319/388 (82%), Gaps = 34/388 (8%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQR+++APLNPVL+RETVKKV+KCMARLQELQ+TV GG KMISGVSLSPRSTR
Sbjct: 1   MVARTPPKQRRMVAPLNPVLIRETVKKVEKCMARLQELQFTVAGGNKMISGVSLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYLRTSLRCKQESLRIKNATP+KSP GK PA   GEW+ MSLPAMLVGETVGEILQA++F
Sbjct: 61  GYLRTSLRCKQESLRIKNATPKKSPVGKLPASVVGEWKRMSLPAMLVGETVGEILQASKF 120

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           A+EIV AVA KTKK TIEDP+TPVT++R HRPN ENTEL+ +RKKEKQNKLQSIR ES S
Sbjct: 121 AKEIVEAVACKTKKSTIEDPQTPVTQQRKHRPN-ENTELKSKRKKEKQNKLQSIRLESTS 179

Query: 181 PKRQRAQSRINFK-VSPPKVIELDKENN-RYLANRVSPRNKPWTKKTVLFPNPLFRATPS 238
           P  QRA+SRINFK VSPPK   ++KEN  +YLANRVSPRN+PW +KTVLFPNPLF +T S
Sbjct: 180 PTLQRARSRINFKVVSPPKKRAVEKENTPKYLANRVSPRNRPWARKTVLFPNPLFLSTDS 239

Query: 239 -QQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSA 297
            QQQKFC+TRSPVI+                             KQTTPHKFLIKSPPSA
Sbjct: 240 TQQQKFCRTRSPVIS---------------------------TTKQTTPHKFLIKSPPSA 272

Query: 298 SKFQVKIKSPPVISSLSPTRSTNLSKK-SPKLSTASKLRRSFSPSRLANRLVSPLKSRK- 355
           SKFQVKIKS PV+ S+SPTR  N SKK SPK+STASKLRRSFSPSRLANRLVSPLK+RK 
Sbjct: 273 SKFQVKIKSSPVV-SISPTRPANFSKKLSPKVSTASKLRRSFSPSRLANRLVSPLKTRKS 331

Query: 356 TVQKCDGQMSGLKQRPTYVPKRFSMGRI 383
           +VQK DG MSGLKQRP  +P+RFS+GR 
Sbjct: 332 SVQKTDGLMSGLKQRPASMPRRFSLGRF 359

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487739|ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259649 [Vitis vinifera]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/391 (68%), Positives = 297/391 (75%), Gaps = 42/391 (10%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQ+K+ APLNP+LLRETVKKVD+CMARLQELQYTV GGTK+ISG SLSPRSTR
Sbjct: 1   MVARTPPKQKKIAAPLNPILLRETVKKVDQCMARLQELQYTVAGGTKVISGKSLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYL+TS RCKQESLRIKNA PRKSP GKF    GGEWR MSLPAMLVGETVGEILQA+QF
Sbjct: 61  GYLKTSFRCKQESLRIKNAAPRKSPVGKFAGSTGGEWRRMSLPAMLVGETVGEILQASQF 120

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           AREIVAA    TKK +++DPKTPVT+ R  RP PENTELR RR +EKQ +LQSIRSESD+
Sbjct: 121 AREIVAA----TKKTSMDDPKTPVTQGRKQRPQPENTELRARRNREKQVRLQSIRSESDA 176

Query: 181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLF-RATPSQ 239
           P  QRA+SRINFKV  PK  E +KEN    ANRVSPRN+PW +KTV+FPNPLF   T S 
Sbjct: 177 PSLQRARSRINFKVVSPKKGEFNKENYHLSANRVSPRNRPWARKTVMFPNPLFLHNTASH 236

Query: 240 QQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASK 299
           QQKFC+TRSPV+A+ ++                             PHKFLIKSPPSASK
Sbjct: 237 QQKFCRTRSPVLAKTRE----------------------------LPHKFLIKSPPSASK 268

Query: 300 FQVKIKSPPVISSLSPTRSTN-LSKK-SPKLSTASKLRRSFSPSRLANRLVSPLKSRKTV 357
            QVKIK+ PV  S+SPTRST  L KK SPK+S A K RRSFSPSRLANRLVSPLK+RK V
Sbjct: 269 SQVKIKNLPV--SISPTRSTTALGKKSSPKVSAAVKFRRSFSPSRLANRLVSPLKNRKCV 326

Query: 358 QKCDG--QMSGLKQRPT---YVPKRFSMGRI 383
           QK DG   MSGLKQRP     +P R S+ RI
Sbjct: 327 QKSDGLMMMSGLKQRPASSLVMPTRLSVERI 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088324|emb|CBI36769.3| unnamed protein product [Vitis vinifera]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/376 (68%), Positives = 287/376 (76%), Gaps = 37/376 (9%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQ+K+ APLNP+LLRETVKKVD+CMARLQELQYTV GGTK+ISG SLSPRSTR
Sbjct: 1   MVARTPPKQKKIAAPLNPILLRETVKKVDQCMARLQELQYTVAGGTKVISGKSLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYL+TS RCKQESLRIKNA PRKSP GKF    GGEWR MSLPAMLVGETVGEILQA+QF
Sbjct: 61  GYLKTSFRCKQESLRIKNAAPRKSPVGKFAGSTGGEWRRMSLPAMLVGETVGEILQASQF 120

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           AREIVAA    TKK +++DPKTPVT+ R  RP PENTELR RR +EKQ +LQSIRSESD+
Sbjct: 121 AREIVAA----TKKTSMDDPKTPVTQGRKQRPQPENTELRARRNREKQVRLQSIRSESDA 176

Query: 181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQ 240
           P  QRA+SRINFKV  PK  E +KEN    ANRVSPRN+PW +KTV+FPNPLF       
Sbjct: 177 PSLQRARSRINFKVVSPKKGEFNKENYHLSANRVSPRNRPWARKTVMFPNPLF------- 229

Query: 241 QKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASKF 300
                              L   +S QQK  + RSPV+ + ++  PHKFLIKSPPSASK 
Sbjct: 230 -------------------LHNTASHQQKFCRTRSPVLAKTREL-PHKFLIKSPPSASKS 269

Query: 301 QVKIKSPPVISSLSPTRSTN-LSKK-SPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQ 358
           QVKIK+ PV  S+SPTRST  L KK SPK+S A K RRSFSPSRLANRLVSPLK+RK VQ
Sbjct: 270 QVKIKNLPV--SISPTRSTTALGKKSSPKVSAAVKFRRSFSPSRLANRLVSPLKNRKCVQ 327

Query: 359 KCDG--QMSGLKQRPT 372
           K DG   MSGLKQRP 
Sbjct: 328 KSDGLMMMSGLKQRPA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574945|ref|XP_003555603.1| PREDICTED: uncharacterized protein LOC100789005 [Glycine max]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/376 (66%), Positives = 290/376 (77%), Gaps = 32/376 (8%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQ+K+LA LNPVL++ET+ KVD+C+ARLQELQYTVTGGTK++SGV+LSPRSTR
Sbjct: 1   MVARTPPKQKKLLAALNPVLIKETLNKVDQCVARLQELQYTVTGGTKVVSGVTLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQF 120
           GYLRTSLRCKQESLRIKN   R+SP GKFPA   GEW+ MSLPAMLVGETVGEILQA+QF
Sbjct: 61  GYLRTSLRCKQESLRIKNGASRRSPVGKFPANT-GEWKRMSLPAMLVGETVGEILQASQF 119

Query: 121 AREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDS 180
           AREIV+AV  KT     EDPKTP++++ N +   ENT+LR RRKKEKQ K Q+      S
Sbjct: 120 AREIVSAVGKKTDP---EDPKTPMSQRSNKKVELENTQLRARRKKEKQTKAQN----DGS 172

Query: 181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRAT-PSQ 239
           P  QRA+SRINFKVSPPKV E DKE NRY+ANRVSPRN+PWT+KTVLFPNPLF +T  S 
Sbjct: 173 PSLQRARSRINFKVSPPKVREFDKERNRYMANRVSPRNRPWTRKTVLFPNPLFLSTHSSS 232

Query: 240 QQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASK 299
           QQ+FCKTRSP+I R+                   R     +N+  TPHKFLIKSP SASK
Sbjct: 233 QQQFCKTRSPIITRN-------------------RGTTSHKNRGGTPHKFLIKSPSSASK 273

Query: 300 FQVKIKSPPVISSLSPTRSTNLSKKSPK--LSTASKLRRSFSPSRLANRLV--SPLKSRK 355
           FQV+IK  P   S+SPT+   LS+  PK   STASK RRSFSPSR+A+RLV  SPL++RK
Sbjct: 274 FQVQIKKSPPTVSISPTKPARLSRSPPKRSTSTASKFRRSFSPSRIASRLVSLSPLRTRK 333

Query: 356 TVQKCDGQMSGLKQRP 371
           TVQK DG +SGLKQRP
Sbjct: 334 TVQKNDGFVSGLKQRP 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533579|ref|XP_003535340.1| PREDICTED: uncharacterized protein LOC100817280 [Glycine max]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/378 (65%), Positives = 287/378 (75%), Gaps = 40/378 (10%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVARTPPKQRK+LA LNPVL++ET+ KVD+C+ARLQELQYTVTGGTK++SGV+LSPRSTR
Sbjct: 1   MVARTPPKQRKLLAALNPVLIKETLIKVDQCVARLQELQYTVTGGTKVVSGVNLSPRSTR 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAG--GEWRGMSLPAMLVGETVGEILQAT 118
           GYLRTSLRCKQESLRIKN   R+SP GKFPA  G   EW+ MSLPAMLVGETVGEILQA+
Sbjct: 61  GYLRTSLRCKQESLRIKNGASRRSPVGKFPANTGFVCEWKRMSLPAMLVGETVGEILQAS 120

Query: 119 QFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSES 178
           QFAREIV AV  KT +   EDPKTP++++ N +   ENT+LR RRKKEKQ K Q+     
Sbjct: 121 QFAREIVTAVGKKTPQ---EDPKTPMSQRSNKKAELENTQLRARRKKEKQTKAQN----D 173

Query: 179 DSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRAT-P 237
            SP  QRA+SRINFKVSPPKV E DKE+NRY+ANRVSPRNKPW +KTVLFPNPLF +T  
Sbjct: 174 GSPSLQRARSRINFKVSPPKVREFDKESNRYMANRVSPRNKPWARKTVLFPNPLFLSTHS 233

Query: 238 SQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSA 297
           S QQ+FCKTRSPVI+R++                             TPHKFLIKSP SA
Sbjct: 234 SSQQQFCKTRSPVISRNR--------------------------GGGTPHKFLIKSPTSA 267

Query: 298 SKFQVKIKSPPVISSLSPTRSTNLSKKSPK--LSTASKLRRSFSPSRLANRLV--SPLKS 353
           +K QV+IK+ P   S+SPT+   LS+  PK   STASK RRSFSPSR+A+RLV  SPL++
Sbjct: 268 TKVQVQIKNSPPTVSISPTKPARLSRSPPKRSTSTASKFRRSFSPSRIASRLVSLSPLRT 327

Query: 354 RKTVQKCDGQMSGLKQRP 371
           RKTVQ+ DG +SGLKQ P
Sbjct: 328 RKTVQRNDGFVSGLKQCP 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866344|emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/368 (65%), Positives = 271/368 (73%), Gaps = 39/368 (10%)

Query: 22   RETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTRGYLRTSLRCKQESLRIKNATP 81
            R ++  VD+CMARLQELQYTV GGTK+ISG SLSPRSTRGYL+TS RCKQESLRIKNA P
Sbjct: 905  RPSITGVDQCMARLQELQYTVAGGTKVISGKSLSPRSTRGYLKTSFRCKQESLRIKNAAP 964

Query: 82   RKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPK 141
            RKSP GKF    GGEWR MSLPAMLVGETVGEILQA+QFAREIVAA    TKK +++DPK
Sbjct: 965  RKSPVGKFAGSTGGEWRRMSLPAMLVGETVGEILQASQFAREIVAA----TKKTSMDDPK 1020

Query: 142  TPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIE 201
            TPVT+ R  RP PENTELR RR +EKQ +LQSIRSESD+P  QRA+SRINFKV  PK  E
Sbjct: 1021 TPVTQGRKQRPQPENTELRARRNREKQVRLQSIRSESDAPSLQRARSRINFKVVSPKKGE 1080

Query: 202  LDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQKFCKTRSPVIARDKQPLFLS 261
             +KEN    ANRVSPRN+PW +KTV+FPNPLF                          L 
Sbjct: 1081 FNKENYHLSANRVSPRNRPWARKTVMFPNPLF--------------------------LH 1114

Query: 262  TPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNL 321
              +S QQK  + RSPV+ + ++  PHKFLIKSPPSASK QVKIK+ PV  S+SPTRST L
Sbjct: 1115 NTASHQQKFCRTRSPVLAKTREL-PHKFLIKSPPSASKSQVKIKNLPV--SISPTRSTAL 1171

Query: 322  SKKS-PKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQKCDG--QMSGLKQRPT---YVP 375
             KKS PK+S A K RRSFSPSRLANRLVSPLK+RK VQK DG   MSGLKQRP     +P
Sbjct: 1172 GKKSSPKVSAAVKFRRSFSPSRLANRLVSPLKNRKCVQKSDGLMMMSGLKQRPASSLVMP 1231

Query: 376  KRFSMGRI 383
             R S+ RI
Sbjct: 1232 TRLSVERI 1239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512001|ref|XP_003626289.1| Microtubule binding protein [Medicago truncatula] gi|355501304|gb|AES82507.1| Microtubule binding protein [Medicago truncatula]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/429 (55%), Positives = 285/429 (66%), Gaps = 73/429 (17%)

Query: 1   MVARTPPKQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPRSTR 60
           MVA+TPP+QR +LA LNP+L+R+T+ KVD+CM RLQELQ+TV GGTK++SGV+LSPRST 
Sbjct: 1   MVAKTPPRQRNMLAVLNPILIRQTLNKVDQCMDRLQELQFTVAGGTKLVSGVNLSPRSTT 60

Query: 61  GYLRTSLRCKQESLRIKNATPRKSPKGKFPAPA--GGEWRGMSLPAMLVGETVGEILQAT 118
            YLRTSLRCKQES+RIKN+  + SP GKFP PA  GGEWR MSLPAM VGETV EILQA+
Sbjct: 61  TYLRTSLRCKQESIRIKNSAQKTSPLGKFPKPANLGGEWRQMSLPAMFVGETVIEILQAS 120

Query: 119 QFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSES 178
           QFAREIV++V  K+    +EDPKTP++     + + ENT+LR +R+KEKQNK QS     
Sbjct: 121 QFAREIVSSVGAKS---AVEDPKTPLSRNSYKKEDSENTQLRAKRRKEKQNKQQS----- 172

Query: 179 DSPK--RQRAQSRINFKVSPPK-VIELDKEN--NRYLANRVSPRNKPWTKKTVLFPNPLF 233
           DSP    QR +SRINFKVSPPK V +LDKE   N+YLANRVSPRN+PW +KTVLFPNPLF
Sbjct: 173 DSPPLPSQRVRSRINFKVSPPKKVKDLDKEKEKNKYLANRVSPRNRPWARKTVLFPNPLF 232

Query: 234 RATPSQQQKFCKTRSPVIA-----------RDKQP--LFLSTPSSQQQKLSKIRSPVITR 280
            +T S QQ+FCKTRSPVI+           R K P    + TP+S       + S    +
Sbjct: 233 SSTSSHQQQFCKTRSPVISRNRATTTPHKFRIKSPHKFLIETPNS-------VTSTTPHK 285

Query: 281 NKQTTPHKFLIKSPPS---------------ASKFQVKIKSPPVISSLSPTRSTN----- 320
            +  +PHKFLIKSP S               ASK    +  P +++     RS       
Sbjct: 286 FRILSPHKFLIKSPASPKRPTRLNSPKRCGAASKSSRPLSPPRLVAPTKSKRSVQKSDGL 345

Query: 321 ------------------LSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRKTVQKCDG 362
                             LSK SPK STASKLRRSFSPSR+  RLVSPLKS+K VQK DG
Sbjct: 346 VCLNRSSLKSKKNDGLVCLSKSSPKRSTASKLRRSFSPSRMVTRLVSPLKSKKNVQKVDG 405

Query: 363 QMSGLKQRP 371
            +SGLKQRP
Sbjct: 406 FVSGLKQRP 414

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|150036249|gb|ABR67412.1| microtubule binding protein [Cucumis melo subsp. melo]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 247/450 (54%), Positives = 289/450 (64%), Gaps = 107/450 (23%)

Query: 1   MVARTPPKQRKVLAP---------LNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISG 51
           MVA+TPPKQ+K++A          LNPV +RET+KKV+ CM+RLQELQ+TVTGG K+ISG
Sbjct: 1   MVAKTPPKQKKMVASAAAAAAAATLNPVQVRETLKKVEMCMSRLQELQFTVTGGNKVISG 60

Query: 52  VSLSPRSTRGYLRTSLRCKQESLRIKNATPRKSPKGKFP--APAGGEWRGMSLPAMLVGE 109
           VSLSPRSTR YL+TSLRCKQES+RIKN   +KSP GKFP  A  GGEW+ MSLPAMLVGE
Sbjct: 61  VSLSPRSTRTYLKTSLRCKQESIRIKNGGGKKSPVGKFPSNAGGGGEWKRMSLPAMLVGE 120

Query: 110 TVGEILQATQFAREIVAAV--ATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEK 167
           T+GEIL A++FARE+V AV      K  +++DPKTP+T +RN +PN E++ELR RRK+EK
Sbjct: 121 TIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKREK 180

Query: 168 QNKLQSIRSE-SDSPKRQRAQSRINFK-VSPP-KVIELDKENNRYLANRVSPRNKPWTKK 224
           Q K QS R E S SP  QR +SRINFK VSPP K   +DKEN  YLANRVSPRN+PWTKK
Sbjct: 181 QEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGYLANRVSPRNRPWTKK 240

Query: 225 TVLFPNPLFRATP--SQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNK 282
           T+LFPNPLF ++   SQQ KFC+T+SPVIA                           + +
Sbjct: 241 TILFPNPLFLSSDNSSQQPKFCRTKSPVIA---------------------------KTR 273

Query: 283 QTTPHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNL--------------------- 321
           Q TPHKFLIKSP SASKFQVKI SPPV+   SPTR   +                     
Sbjct: 274 QQTPHKFLIKSPVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVIT 332

Query: 322 ----------SKKSPKLST----------------------------ASKLRRSFSPSRL 343
                     SK SPK ST                            ASKLR+SFSPSRL
Sbjct: 333 RSPTRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRL 392

Query: 344 ANRLVSPLKSRKTVQKCDGQM--SGLKQRP 371
           A RLVSPLKSRK+VQK DG +  SGLKQRP
Sbjct: 393 AARLVSPLKSRKSVQKYDGNINVSGLKQRP 422

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
TAIR|locus:2096279	444	ATN "AT3G05330" [Arabidopsis t	0.906	0.781	0.536	9.6e-89
UNIPROTKB|E1BQL2	940	E1BQL2 "Uncharacterized protei	0.592	0.241	0.279	6.3e-08
UNIPROTKB|Q5ZMJ9	888	SRRM1 "Serine/arginine repetit	0.519	0.224	0.293	2e-06
UNIPROTKB|E1BP16	901	SRRM1 "Uncharacterized protein	0.574	0.244	0.294	2.1e-06
UNIPROTKB|Q8IYB3	904	SRRM1 "Serine/arginine repetit	0.579	0.245	0.278	2.1e-06
UNIPROTKB|E9PCT1	916	SRRM1 "Serine/arginine repetit	0.566	0.236	0.284	4.5e-06
UNIPROTKB|F1PZZ3	1061	NEFH "Uncharacterized protein"	0.767	0.277	0.257	7e-06
UNIPROTKB|P12036	1026	NEFH "Neurofilament heavy poly	0.741	0.276	0.256	1.1e-05
UNIPROTKB|F1MSQ6	1082	NEFH "Uncharacterized protein"	0.791	0.280	0.243	8.9e-05
ZFIN|ZDB-GENE-070402-1	2368	setx "senataxin" [Danio rerio	0.715	0.115	0.226	0.00013

TAIR|locus:2096279 ATN "AT3G05330" [Arabidopsis thaliana (taxid:3702)]

 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 212/395 (53%), Positives = 276/395 (69%)

Query:     1 MVARTPPKQRKV---LAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSPR 57
             MVARTP KQRKV   + PLN  LL+ET+ KVDKCM RLQELQYT+ GGTK++SGV+LSPR
Sbjct:     1 MVARTPQKQRKVAMVVPPLNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLSPR 60

Query:    58 STRGYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQA 117
             STR YL+TSLRCKQE+LRIKNAT +KSP GKFPA + G+WR MSLPAML+GETV EILQA
Sbjct:    61 STRIYLKTSLRCKQETLRIKNATNKKSPVGKFPASSPGDWRKMSLPAMLLGETVNEILQA 120

Query:   118 TQFAREIVAAVATK----TKKITI--ED--PKTPVTEKRNHRPNPE--NTELRVRRKKEK 167
             +Q  R+IV A+A K    ++++T+  ED  PKTP T++++   NPE  ++ ++ RRKKEK
Sbjct:   121 SQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIKARRKKEK 180

Query:   168 QNKLQSIRSESDSPKR-QRAQSRINFKVSPPKVIELDKENN-RYLANRVSPRNKPWTKKT 225
             QN+    RSESDSP   QRA+SRI F+   P+V   + EN+ R+LANRVSP++KPW KK 
Sbjct:   181 QNR----RSESDSPPSLQRARSRIAFRTISPQVKGNNGENSFRHLANRVSPKHKPWVKKA 236

Query:   226 VLFPNPLF-RATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQT 284
             VLFPNPLF   T +QQ KF +T SPVIAR++              +S I++     NK+T
Sbjct:   237 VLFPNPLFISGTATQQAKFSRTMSPVIARNE--------------ISSIKN-----NKET 277

Query:   285 TPHKFLIKSPP-SASKFQVKIKSPPVISSLSPTRS-TNLSKKSPKLSTASKLRRSFSPSR 342
              P+KFLIKSPP SASKFQVKI+SPP +  +SPTR+ +N  +KSP+  + S  R      +
Sbjct:   278 -PYKFLIKSPPTSASKFQVKIRSPPKVL-VSPTRNGSNSVRKSPR-GSRSPTRTVNLGKK 334

Query:   343 LANRLVSPLKSRKTVQKCDGQMSGLKQRPTYVPKR 377
              A+  +SP+  R T ++     +  K R ++ P R
Sbjct:   335 SAS--ISPI--RNTGKRSPKLSTAAKLRRSFTPTR 365

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0000914 "phragmoplast assembly" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007108 "cytokinesis, initiation of separation" evidence=IMP

GO:0009574 "preprophase band" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

UNIPROTKB|E1BQL2 E1BQL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 72/258 (27%), Positives = 114/258 (44%)

Query:   122 REIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSP 181
             +E V   AT    I    PK P +E     P PE  E+   R  +K+ + +  ++   SP
Sbjct:   229 KETVVQEATSNSDI----PKAPKSEP----PVPETKEISPERNSKKEREKEKEKTRQRSP 280

Query:   182 KRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQ 241
              R +++SR   + SP       +  +R  +   SPR +P  ++    P+P  R  P +  
Sbjct:   281 TRSKSRSRSRSR-SPSH--SRPRRRHRSRSRSYSPRRRPSPRRR---PSPRRRTPPRRMP 334

Query:   242 ---KFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQT--TPHKFLIKSPPS 296
                +  ++RSPV  R +    LS  SS     S+ RSP     K+T  +P +   +  PS
Sbjct:   335 PPPRHRRSRSPVRRRRRSSASLSGSSSSSSS-SRSRSPPKKPPKRTVSSPPRKTRRLSPS 393

Query:   297 ASKFQVKIK-SPPVISSLSPTRSTNLSKKSPKLST-ASKLRRSFSPSRLANR--LVSPLK 352
             AS  + + + SPP      P RS      +P+ S  A K R S SP R + +  L++P  
Sbjct:   394 ASPPRRRHRPSPPASPPPKPRRSP-----TPQQSNRARKSRGSVSPGRASGKSFLLAP-- 446

Query:   353 SRKTVQKCDGQMSGLKQR 370
               K+ +K +      K R
Sbjct:   447 KHKSTEKRESPSPAPKPR 464

GO:0006397 "mRNA processing" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

UNIPROTKB|Q5ZMJ9 SRRM1 "Serine/arginine repetitive matrix protein 1" [Gallus gallus (taxid:9031)]

 Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 66/225 (29%), Positives = 99/225 (44%)

Query:   122 REIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSP 181
             +E V   AT    I    PK P +E     P PE  E+   R  +K+ + +  ++   SP
Sbjct:   229 KETVVQEATSNSDI----PKAPKSEP----PVPETKEISPERNSKKEREKEKEKTRQRSP 280

Query:   182 KRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFRATPSQQQ 241
              R +++SR   + SP       +  +R    R SPR +P  ++      P  R  P  + 
Sbjct:   281 TRSKSRSRSRSR-SPSHSRPRRRHRSRS-RRRPSPRRRPSPRRRT----PPRRMPPPPRH 334

Query:   242 KFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQT--TPHKFLIKSPPSASK 299
             +  ++RSPV  R +    LS  SS     S+ RSP     K+T  +P +   +  PSAS 
Sbjct:   335 R--RSRSPVRRRRRSSASLSGSSSSSSS-SRSRSPPKKPPKRTVSSPPRKTRRLSPSASP 391

Query:   300 FQVKIK-SPPVISSLSPTRSTNLSKKSPKLST-ASKLRRSFSPSR 342
              + + + SPP      P RS      +P+ S  A K R S SP R
Sbjct:   392 PRRRHRPSPPASPPPKPRRSP-----TPQQSNRARKSRGSVSPGR 431

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E1BP16 SRRM1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 74/251 (29%), Positives = 110/251 (43%)

Query:   103 PAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKT-PVTEKRNHRPNPENTELRV 161
             PA    E   E+ + +   +E     AT T  I ++ PKT PV E +   P+PE      
Sbjct:   212 PAPEKKEKTPELPEPSVKVKEPSVQEATSTSDI-LKVPKTEPVLEPKE--PSPEKNS--- 265

Query:   162 RRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPW 221
               KKEK+ K +  RS S S  R R +SR      P K        +R  +   SPR +P 
Sbjct:   266 --KKEKE-KTRP-RSRSRSKSRSRTRSRSPSHTRPRK-------RHRSRSRSYSPRRRPS 314

Query:   222 TKKTVLFPNPLFRATPSQQQ---KFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVI 278
              ++    P+P  R  P +     +  ++RSPV  R +    LS  SS     S+ RSP  
Sbjct:   315 PRRR---PSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS-SRSRSPPK 370

Query:   279 TRNKQTT-PHKFLIKSPPSASKFQVKIK-SPPVISSLSPTRSTNLSKKSPKLSTASKLRR 336
                K+T+ P +   +  PSAS  + + + SPP     +P   T  S    + +   K R 
Sbjct:   371 KPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPA----TPPPKTRHSPTPQQSNRTRKSRV 426

Query:   337 SFSPSRLANRL 347
             S SP R + ++
Sbjct:   427 SVSPGRTSGKV 437

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|Q8IYB3 SRRM1 "Serine/arginine repetitive matrix protein 1" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 70/251 (27%), Positives = 108/251 (43%)

Query:   103 PAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKT-PVTEKRNHRPNPENTELRV 161
             PA    E   E+ + +   +E     AT T  I ++ PK  P+ E +   P+PE      
Sbjct:   212 PAPEKKEKTPELPEPSVKVKEPSVQEATSTSDI-LKVPKPEPIPEPKE--PSPEKNS--- 265

Query:   162 RRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPW 221
               KKEK+ +    RS S S  R R +SR      P       +  +R  +   SPR +P 
Sbjct:   266 --KKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRP-------RRRHRSRSRSYSPRRRPS 316

Query:   222 TKKTVLFPNPLFRATPSQQQ---KFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVI 278
              ++    P+P  R  P +     +  ++RSPV  R +    LS  SS     S+ RSP  
Sbjct:   317 PRRR---PSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS-SRSRSPPK 372

Query:   279 TRNKQTT-PHKFLIKSPPSASKFQVKIK-SPPVISSLSPTRSTNLSKKSPKLSTASKLRR 336
                K+T+ P +   +  PSAS  + + + SPP     +P   T  S    + +   K R 
Sbjct:   373 KPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPA----TPPPKTRHSPTPQQSNRTRKSRV 428

Query:   337 SFSPSRLANRL 347
             S SP R + ++
Sbjct:   429 SVSPGRTSGKV 439

GO:0003677 "DNA binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0000375 "RNA splicing, via transesterification reactions" evidence=TAS

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0005634 "nucleus" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0006369 "termination of RNA polymerase II transcription" evidence=TAS

GO:0006406 "mRNA export from nucleus" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0031124 "mRNA 3'-end processing" evidence=TAS

UNIPROTKB|E9PCT1 SRRM1 "Serine/arginine repetitive matrix protein 1" [Homo sapiens (taxid:9606)]

 Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 70/246 (28%), Positives = 105/246 (42%)

Query:   103 PAMLVGETVGEILQATQFAREIVAAVATKTKKITIEDPKT-PVTEKRNHRPNPENTELRV 161
             PA    E   E+ + +   +E     AT T  I ++ PK  P+ E +   P+PE      
Sbjct:   212 PAPEKKEKTPELPEPSVKVKEPSVQEATSTSDI-LKVPKPEPIPEPKE--PSPEKNS--- 265

Query:   162 RRKKEKQNKLQSIRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPW 221
               KKEK+ +    RS S S  R R +SR      P       +  +R  +   SPR +P 
Sbjct:   266 --KKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRP-------RRRHRSRSRSYSPRRRPS 316

Query:   222 TKKTVLFPNPLFRATPSQQQ---KFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVI 278
              ++    P+P  R  P +     +  ++RSPV  R +    LS  SS     S+ RSP  
Sbjct:   317 PRRR---PSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS-SRSRSPPK 372

Query:   279 TRNKQTT-PHKFLIKSPPSASKFQVKIK-SPPVISSLSPTRSTNLSKKSPKLSTASKLRR 336
                K+T+ P +   +  PSAS  + + + SPP     +P   T  S    + +   K R 
Sbjct:   373 KPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPA----TPPPKTRHSPTPQQSNRTRKSRV 428

Query:   337 SFSPSR 342
             S SP R
Sbjct:   429 SVSPGR 434

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|F1PZZ3 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 83/322 (25%), Positives = 132/322 (40%)

Query:    55 SPRSTRGYLRTSLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEI 114
             SP   +   +     K+E+   K+    KSP+ K  +P   E +        V E     
Sbjct:   558 SPTEVKSPEKAKSPAKEEA---KSPVEAKSPE-KAKSPVKEEAKSPEKAKSPVKEEAKSP 613

Query:   115 LQATQFAREIVAAVATKTKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSI 174
              +A    +E  A    K K    E+ K+PV E+     +PE T+  V+ + +   K +S 
Sbjct:   614 EKAKSPVKE-EAKSPEKAKSPVKEEAKSPVKEEAK---SPEKTKSPVKEEAKSPEKAKS- 668

Query:   175 RSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPLFR 234
               ++ SP ++ A+S    K SP K      E  +   + V    K   KK     +P+  
Sbjct:   669 PEKAKSPVKEEAKSPEKAK-SPVKEEAKSPEKAK---SPVKEEAKSPEKKA---KSPVKE 721

Query:   235 ATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKL-SKIRSPVITR----NKQTTPHKF 289
                S +    K +SPV    K P    +P  ++ K   K +SPV        K  +P K 
Sbjct:   722 EAKSPE----KAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE 777

Query:   290 LIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSK-KSPKLSTASKLRRSFSPSRLANRLV 348
               KSP  A K   K KSP    + SP ++ +  K KSP    A    ++ SP ++ + + 
Sbjct:   778 EAKSPEKA-KSPEKAKSPVKEEAKSPEKAKSPEKAKSPVKEEAKSPEKAKSPEKVKSPVK 836

Query:   349 SPLKS-RKTVQKCDGQMSGLKQ 369
                K+  K V K +   S +K+
Sbjct:   837 EETKAPEKEVTKKEEAKSPIKE 858

GO:0005882 "intermediate filament" evidence=IEA

UNIPROTKB|P12036 NEFH "Neurofilament heavy polypeptide" [Homo sapiens (taxid:9606)]

 Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 81/316 (25%), Positives = 131/316 (41%)

Query:    77 KNATPRKSPK---GKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVAAVAT--K 131
             K+    KSP+    K PA      +  S PA    ++  E     +   +  A V +  K
Sbjct:   525 KSPAEAKSPEKEEAKSPAEVKSPEKAKS-PAKEEAKSPPEAKSPEKEEAKSPAEVKSPEK 583

Query:   132 TKKITIEDPKTPVTEKRNHRPNPENTELRVRRKKEKQNKLQSIRSESDSPKRQRAQSRIN 191
              K    E+ K+P   K     +PE  +  V  K+E ++      +E+ SP ++ A+S   
Sbjct:   584 AKSPAKEEAKSPAEAK-----SPEKAKSPV--KEEAKSP-----AEAKSPVKEEAKSPAE 631

Query:   192 FKVSPPKVIELDKENNRYLANRVSPRN-KPWTKKTVLFPNPLFRATPSQQQKFCKTRSPV 250
              K SP K     KE  +      SP   K   K+    P        ++ +   K +SPV
Sbjct:   632 VK-SPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 690

Query:   251 IARDKQPLFLSTPSSQQQKL-SKIRSPVITR----NKQTTPHKFLIKSPPSA-SKFQVKI 304
              A  K P    +P  ++ K   K +SPV        K  +P K   K+P  A S  + + 
Sbjct:   691 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEA 750

Query:   305 KSPPVISSLSPTRSTNLSKKSPKLSTASKLRRSFSPS-RLANRLVSPLKSR-KTVQKCDG 362
             KSP    + SP ++  L  KSP+  T +K   + SP+ +   +  SP+K   K+ +K   
Sbjct:   751 KSPE--KAKSPEKAKTLDVKSPEAKTPAK-EEARSPADKFPEKAKSPVKEEVKSPEKAKS 807

Query:   363 QMSGLKQRPTY-VPKR 377
              +    + P   +PK+
Sbjct:   808 PLKEDAKAPEKEIPKK 823

GO:0008219 "cell death" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0045110 "intermediate filament bundle assembly" evidence=IEA

GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA

GO:0005883 "neurofilament" evidence=NAS

GO:0007399 "nervous system development" evidence=NAS

GO:0030424 "axon" evidence=TAS

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1MSQ6 NEFH "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
 Identities = 81/333 (24%), Positives = 132/333 (39%)

Query:    55 SPRSTRGYLRTSLRCKQESLRIKNATPRKSP-KGKFPAPAGGEWRGMSLPAMLVGETVGE 113
             SP   +  ++   +  Q+    K+    KSP K K P  A    +  S P       V E
Sbjct:   504 SPEKAKSPVKEEAKSPQKE-EAKSPAEVKSPEKAKSPVEAKSPEKAKS-P-------VKE 554

Query:   114 ILQATQFAREIVAAVAT-KTKKITIEDPKTPVTEKRN-HRPNPENTELRVRRKKEKQNKL 171
               ++ + A+  V A +  K K    E+ K+P   K      +PE  E +   K +   K 
Sbjct:   555 EAKSPEKAKSPVEAKSPEKAKSPMKEEAKSPEKVKSPVEAKSPEKEEAKSPEKAKSPEKA 614

Query:   172 QS-IRSESDSPKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRN-KPWTKKTVLFP 229
             +S ++ E+ SP  ++A+S +  K SP K      E  +      SP   K   K+    P
Sbjct:   615 KSPVKEEAKSP--EKAKSPVEAK-SPVKEEAKSPEKAKSPVEAKSPEKAKSPVKEEAKSP 671

Query:   230 NPLFRATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKL-SKIRSPVITR----NKQT 284
                      + +   K +SPV    K P    +P  ++ K   K +SPV        K  
Sbjct:   672 EKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAK 731

Query:   285 TPHKFLIKSP-----PSASKFQVKIKSPPVISSLSPTRSTNLSK---KSPKLSTASKLRR 336
             +P K   KSP     P  +K   K KSP    + SP ++ +  K   KSP+ + +     
Sbjct:   732 SPVKEEAKSPEKAKSPVEAKSPEKAKSPAKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEE 791

Query:   337 SFSPSRLANRLVSPLKSRKTVQKCDGQMSGLKQ 369
             + SP +  +      KS +  +  +   S +K+
Sbjct:   792 AKSPEKAKSPAKEEAKSPEKAKSPEKPKSPVKE 824

GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA

GO:0045110 "intermediate filament bundle assembly" evidence=IEA

GO:0005883 "neurofilament" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0006334 "nucleosome assembly" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0000786 "nucleosome" evidence=IEA

ZFIN|ZDB-GENE-070402-1 setx "senataxin" [Danio rerio (taxid:7955)]

 Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
 Identities = 68/300 (22%), Positives = 120/300 (40%)

Query:    67 LRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQATQFAREIVA 126
             LR   +   +KN +P +SP    P   G ++  +S   +   ET   +  A   A ++  
Sbjct:   824 LRSSYKECTVKNKSP-ESPV--MPESPGRDYDDLSESQVFEFETQQYVASAWDNA-DLDG 879

Query:   127 AVATKT-KKITIEDPKTPVTEKRNHRPNPENTEL----RVRRK-KEKQNKLQSIRSESDS 180
             +V TK  K   I  P+   T           TEL     + R  ++ + K++  +    +
Sbjct:   880 SVLTKNLKSDRILKPQLDETPNEASPSWSSETELVPDEDIERACQQAEEKIRQQQPRKPA 939

Query:   181 PKRQRAQSRINFKVSPPKVIELDKENNRYLANRVSPRNKPWTKKTVLFPNPL----FRAT 236
              + +R   ++  K+ P +  E + + + + +++ S   K W K     P PL     + T
Sbjct:   940 DEMERDYKQVEEKIRPQQTRE-NSDVHEF-SSKASSTTKSWDKFAK--PKPLKTKVTKTT 995

Query:   237 PSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKFLIKSPPS 296
             PS ++   + + PV+           P  +      +  P    +  TTP    + S  S
Sbjct:   996 PSDKRDHLQVKKPVLIDALAQKIRRHPWKRSSTSEDMEEP----SSSTTPSSSAVSSTSS 1051

Query:   297 ASKFQVKIKSPPVISSL-SPTRSTNLSKKSPKLSTASKLRRSFSPSRLANRLVSPLKSRK 355
             +S       S P  SS+ SP  S + S+ +P +    K+R+   P   A RL    K RK
Sbjct:  1052 SSSSS---SSTPSSSSITSPYFSASTSRGTPAIVPPKKVRKIAEPESTAERLGLKKKERK 1108

GO:0006302 "double-strand break repair" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0016020101 hypothetical protein (370 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	383
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.9 bits (131), Expect = 3e-08
 Identities = 56/399 (14%), Positives = 113/399 (28%), Gaps = 126/399 (31%)

Query: 8   KQRKVLAPLNPVLLRETVKKVDKCMARLQELQYTVTGGTKMISGVSLSP-RSTRGY-LRT 65
           + + +L     V     V   D C       +  ++   + I  + +S    +    L  
Sbjct: 17  QYKDIL----SVFEDAFVDNFD-CKDVQDMPKSILS--KEEIDHIIMSKDAVSGTLRLFW 69

Query: 66  SLRCKQESLRIKNATPRKSPKGKFPAPAGGEWRGMSLPAMLVGETVGEILQAT-QFAREI 124
           +L  KQE +                                V + V E+L+   +F   +
Sbjct: 70  TLLSKQEEM--------------------------------VQKFVEEVLRINYKF---L 94

Query: 125 VAAVATKTKKITIEDPKTPVT---EKRN--HRPNPENTELRVRRKKEK---QNKLQSIRS 176
           ++ + T+ +      P        E+R+  +  N    +  V R +     +  L  +R 
Sbjct: 95  MSPIKTEQR-----QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 177 ES-----------------DSPKRQRAQSRINFKV---------SPPKVIE--------L 202
                              D     + Q +++FK+         SP  V+E        +
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 203 DKENNRYLANRVSPR-NKPWTK---KTVLFPNPLFRA--------TPSQQQKF---CKTR 247
           D        +  + +      +   + +L   P                   F   CK  
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269

Query: 248 SPVIARDKQPL-FLSTPSSQQQKLSKIRSPVITRNKQTTPHKFL-IKS---PPSASKFQV 302
             +  R KQ   FLS  ++    L      +     ++   K+L  +    P       +
Sbjct: 270 --LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV----L 323

Query: 303 KIKSPPVISSLS------PTRSTNLSK-KSPKLSTASKL 334
              +P  +S ++           N       KL+T  + 
Sbjct: 324 TT-NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 2e-07
 Identities = 66/456 (14%), Positives = 124/456 (27%), Gaps = 132/456 (28%)

Query: 2   VARTPPKQ--RKVLAPLNP---------------VLLRETVK---------------KVD 29
           V+R  P    R+ L  L P                +  +                   + 
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 30  KC------MARLQELQYTVTGGTKMISGVSLSPR----STRGYLRTSLRCKQ--ESLRI- 76
            C      +  LQ+L Y +       S  S + +    S +  LR  L+ K     L + 
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 77  ---KNATPRKSPKGKFPAPAGGEWRGMSLPA-MLVGETVGEILQATQFAREIVAAVATKT 132
              +NA                 W   +L   +L+  T       T+F +      A  T
Sbjct: 251 LNVQNAK---------------AWNAFNLSCKILL--T-------TRFKQVTDFLSAATT 286

Query: 133 KKITIEDPKTPVTEKRNHRPNPENTEL----------RVRRKKEKQNKLQ-SIRSESDSP 181
             I+++     +T         E   L           + R+    N  + SI +ES   
Sbjct: 287 THISLDHHSMTLTP-------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339

Query: 182 KRQRAQ--SRINF-KVSPPKVIE-----LDKENNR--YLANRVSPRNKPWTKKT--VLFP 229
                     +N  K++   +IE     L+    R  +    V P +         +++ 
Sbjct: 340 GLATWDNWKHVNCDKLT--TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 230 NPLFRATPSQQQKFCKTRSPVIARDKQPLFLSTPSSQQQKLSKIRSPVITRNKQTTPHKF 289
           + +         K  K  S ++ +  +   +S PS   +   K+         +   H+ 
Sbjct: 398 DVIKSDVMVVVNKLHK-YS-LVEKQPKESTISIPSIYLELKVKLE-------NEYALHRS 448

Query: 290 LIKSPPSASKFQVKIKSPPVISS---------LSPTRSTNLSKKSPKLST-----ASKLR 335
           ++        F      PP +           L              +         K+R
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508

Query: 336 RS----FSPSRLANRLVSPLKSRKTVQKCDGQMSGL 367
                  +   + N L      +  +   D +   L
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL 544

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00