Citrus Sinensis ID: 016879

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MGPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
cccccccccccHHHHHHHHHHHHHccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHcccccEEEEEEccccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccEEccc
cccHHHHHHHHccHHHHHHHHHHHccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccHHHHHHEcccccEEEEEcccccccEcccccccEEEEEEcccccccccccccHHcHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccEEEEEEcccccccEEEEEEEHHHHHHHHHHHHHHHHHHccccccccHcccccEEEEEcccccEEEEEc
MGPLFHLWCFVFFRYKAFYEYVKAkgldvgppvgldilvdgtvptgsglssstafVCSSTVALMAAFGVEVPKKEIAQLTCECEQfigtqsggmDQAISIMAKSGfaelidfnpirttdvqlpaggTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFAckngssdpvFAVKEFlrkepytaldiEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHafkdtvssnlseeDKLKKLGdlmndshhscsvlyecscpelEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSridrgvinnndlGLYVFaskpssgaakfkf
MGPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAasnynnrvVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFackngssdpVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHafkdtvssnlseEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLyvfaskpssgaakfkf
MGPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
***LFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKIT*****************************AAHVYS*******************************SHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFA************
*GPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
MGPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKP*********
*GPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
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MGPLFHLWCFVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
Q9SEE5496 Galactokinase OS=Arabidop yes no 0.986 0.758 0.726 1e-158
Q5XIG6458 N-acetylgalactosamine kin yes no 0.905 0.753 0.409 2e-64
Q54DN6501 Galactokinase OS=Dictyost yes no 0.868 0.660 0.381 1e-63
Q68FH4458 N-acetylgalactosamine kin yes no 0.916 0.762 0.388 2e-63
Q01415458 N-acetylgalactosamine kin yes no 0.834 0.694 0.421 2e-60
Q5R6J8458 N-acetylgalactosamine kin yes no 0.834 0.694 0.418 1e-59
P04385528 Galactokinase OS=Saccharo yes no 0.884 0.638 0.349 4e-44
P09608503 Galactokinase OS=Kluyvero yes no 0.881 0.667 0.335 7e-42
O42821504 Galactokinase OS=Candida N/A no 0.881 0.666 0.347 1e-39
P13045520 Protein GAL3 OS=Saccharom no no 0.881 0.646 0.317 3e-38
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  558 bits (1438), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/377 (72%), Positives = 322/377 (85%), Gaps = 1/377 (0%)

Query: 6   HLWCFVFF-RYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALM 64
           H W   F   YK F+EY K+KG+++G PVGLD+LVDG VPTGSGLSSS AFVCS+T+A+M
Sbjct: 120 HKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIM 179

Query: 65  AAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPA 124
           A FG    KKE+AQLTCECE+ IGTQSGGMDQAISIMAK+GFAELIDFNP+R TDV+LP 
Sbjct: 180 AVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPD 239

Query: 125 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEG 184
           GG+FV+AHSLAES KA+TAA NYNNRVVECRL +I+L +KLGM+P+EAISKVKTLSDVEG
Sbjct: 240 GGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDVEG 299

Query: 185 LCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQY 244
           LCV+FA   GSSDP+ AVKE+L++EPYTA +IEKI EEKL SI  N  +SL VLNAA  +
Sbjct: 300 LCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAATHF 359

Query: 245 KLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEE 304
           KLHQRAAHVYSEA+RVH FKDTV+SNLS+E+KLKKLGDLMN+SH+SCSVLYECSCPELEE
Sbjct: 360 KLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPELEE 419

Query: 305 LVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLG 364
           LV VC+ NGALGARLTGAGWGGC VALVKE   +QFI  +KE++Y+ R+++GV+   D+ 
Sbjct: 420 LVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKEDME 479

Query: 365 LYVFASKPSSGAAKFKF 381
           LY+FASKPSSGAA F  
Sbjct: 480 LYLFASKPSSGAAIFNL 496
Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1 Back     alignment and function description
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1 Back     alignment and function description
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1 Back     alignment and function description
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1 Back     alignment and function description
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL1 PE=1 SV=4 Back     alignment and function description
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1 PE=2 SV=2 Back     alignment and function description
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1 Back     alignment and function description
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
356521747 497 PREDICTED: galactokinase-like [Glycine m 0.986 0.756 0.793 1e-175
255556438 499 galactokinase, putative [Ricinus communi 0.986 0.753 0.787 1e-174
224108774 496 predicted protein [Populus trichocarpa] 0.986 0.758 0.790 1e-174
356565073 497 PREDICTED: galactokinase-like [Glycine m 0.986 0.756 0.793 1e-174
224101523 496 predicted protein [Populus trichocarpa] 0.986 0.758 0.785 1e-172
225432012 499 PREDICTED: galactokinase [Vitis vinifera 0.986 0.753 0.790 1e-171
84468320 496 putative galactose kinase [Trifolium pra 0.986 0.758 0.779 1e-171
357479039 497 Galactokinase [Medicago truncatula] gi|3 0.986 0.756 0.774 1e-171
209978716 500 galactokinase [Cucumis melo] 0.986 0.752 0.766 1e-169
449466203426 PREDICTED: galactokinase-like [Cucumis s 0.986 0.882 0.769 1e-169
>gi|356521747|ref|XP_003529513.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/377 (79%), Positives = 333/377 (88%), Gaps = 1/377 (0%)

Query: 6   HLWCFVFF-RYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALM 64
           H W   F   YK F++Y K KG+DVG PVGL++LVDGTVPTGSGLSSS AFVCSST+A+M
Sbjct: 121 HKWGHYFICGYKGFHDYAKLKGVDVGKPVGLEVLVDGTVPTGSGLSSSAAFVCSSTIAIM 180

Query: 65  AAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPA 124
           AAF V  PKKE+AQ+TC+CE+ IGTQSGGMDQAIS+MAK+GFAELIDFNPIR TDVQLPA
Sbjct: 181 AAFDVNFPKKELAQVTCDCERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPA 240

Query: 125 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEG 184
           GGTFV+AHSLAES KA+TAA+NYNNRVVECRL +IVLAIKLGM P+EAISKV TLSDVEG
Sbjct: 241 GGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLAIKLGMDPKEAISKVNTLSDVEG 300

Query: 185 LCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQY 244
           LCV+FA  + SSDPV AVKE+L++EPYTA +IE +T EKLTS   N+++ L+V+  AKQY
Sbjct: 301 LCVSFAGIHNSSDPVLAVKEYLKEEPYTAEEIEAVTGEKLTSFLNNNAAYLEVVKVAKQY 360

Query: 245 KLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEE 304
           KLHQRAAHVYSEAKRVHAFKD VSS LS+ED LKKLGDLMN+SHHSCSVLYECSCPELEE
Sbjct: 361 KLHQRAAHVYSEAKRVHAFKDVVSSTLSDEDMLKKLGDLMNESHHSCSVLYECSCPELEE 420

Query: 305 LVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLG 364
           LVN+CRNNGALGARLTGAGWGGC VALVKESI  QFILNLKE FYQSRID+GVI  NDLG
Sbjct: 421 LVNICRNNGALGARLTGAGWGGCAVALVKESIVPQFILNLKECFYQSRIDKGVIKKNDLG 480

Query: 365 LYVFASKPSSGAAKFKF 381
           LYVFASKPSSGAA FKF
Sbjct: 481 LYVFASKPSSGAAIFKF 497

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255556438|ref|XP_002519253.1| galactokinase, putative [Ricinus communis] gi|223541568|gb|EEF43117.1| galactokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224108774|ref|XP_002314964.1| predicted protein [Populus trichocarpa] gi|222864004|gb|EEF01135.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356565073|ref|XP_003550769.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|224101523|ref|XP_002312315.1| predicted protein [Populus trichocarpa] gi|222852135|gb|EEE89682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432012|ref|XP_002279647.1| PREDICTED: galactokinase [Vitis vinifera] gi|296083222|emb|CBI22858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|84468320|dbj|BAE71243.1| putative galactose kinase [Trifolium pratense] Back     alignment and taxonomy information
>gi|357479039|ref|XP_003609805.1| Galactokinase [Medicago truncatula] gi|355510860|gb|AES92002.1| Galactokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|209978716|gb|ACJ04703.1| galactokinase [Cucumis melo] Back     alignment and taxonomy information
>gi|449466203|ref|XP_004150816.1| PREDICTED: galactokinase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
TAIR|locus:2084344496 GALK [Arabidopsis thaliana (ta 0.981 0.754 0.730 1.9e-147
RGD|1308691458 Galk2 "galactokinase 2" [Rattu 0.853 0.709 0.417 4.8e-62
UNIPROTKB|E1C902398 GALK2 "Uncharacterized protein 0.826 0.791 0.428 2.1e-61
UNIPROTKB|F1P1D1461 GALK2 "Uncharacterized protein 0.826 0.683 0.428 2.1e-61
MGI|MGI:1917226458 Galk2 "galactokinase 2" [Mus m 0.858 0.713 0.403 5.5e-61
DICTYBASE|DDB_G0292112501 galK "galactokinase" [Dictyost 0.931 0.708 0.382 5.5e-61
UNIPROTKB|F1MFK7447 GALK2 "Uncharacterized protein 0.860 0.733 0.406 9e-61
UNIPROTKB|F1SQG6458 GALK2 "Uncharacterized protein 0.839 0.698 0.412 3.9e-60
UNIPROTKB|E2RDA6458 GALK2 "Uncharacterized protein 0.850 0.707 0.412 1.3e-59
ZFIN|ZDB-GENE-041114-143457 galk2 "galactokinase 2" [Danio 0.871 0.726 0.396 2.2e-59
TAIR|locus:2084344 GALK [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
 Identities = 274/375 (73%), Positives = 322/375 (85%)

Query:     6 HLWCFVFF-RYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALM 64
             H W   F   YK F+EY K+KG+++G PVGLD+LVDG VPTGSGLSSS AFVCS+T+A+M
Sbjct:   120 HKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIM 179

Query:    65 AAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPA 124
             A FG    KKE+AQLTCECE+ IGTQSGGMDQAISIMAK+GFAELIDFNP+R TDV+LP 
Sbjct:   180 AVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPD 239

Query:   125 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEG 184
             GG+FV+AHSLAES KA+TAA NYNNRVVECRL +I+L +KLGM+P+EAISKVKTLSDVEG
Sbjct:   240 GGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDVEG 299

Query:   185 LCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQY 244
             LCV+FA   GSSDP+ AVKE+L++EPYTA +IEKI EEKL SI  N  +SL VLNAA  +
Sbjct:   300 LCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAATHF 359

Query:   245 KLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEE 304
             KLHQRAAHVYSEA+RVH FKDTV+SNLS+E+KLKKLGDLMN+SH+SCSVLYECSCPELEE
Sbjct:   360 KLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPELEE 419

Query:   305 LVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLG 364
             LV VC+ NGALGARLTGAGWGGC VALVKE   +QFI  +KE++Y+ R+++GV+   D+ 
Sbjct:   420 LVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKEDME 479

Query:   365 LYVFASKPSSGAAKF 379
             LY+FASKPSSGAA F
Sbjct:   480 LYLFASKPSSGAAIF 494
GO:0004335 "galactokinase activity" evidence=IEA;IGI;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006012 "galactose metabolic process" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0046835 "carbohydrate phosphorylation" evidence=IEA;IDA
GO:0005829 "cytosol" evidence=IDA
RGD|1308691 Galk2 "galactokinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C902 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1D1 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1917226 Galk2 "galactokinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292112 galK "galactokinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1MFK7 GALK2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQG6 GALK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDA6 GALK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-143 galk2 "galactokinase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SEE5GALK1_ARATH2, ., 7, ., 1, ., 60.72670.98680.7580yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.60.946
3rd Layer2.7.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
PLN02521497 PLN02521, PLN02521, galactokinase 0.0
COG0153390 COG0153, GalK, Galactokinase [Carbohydrate transpo 5e-57
TIGR00131386 TIGR00131, gal_kin, galactokinase 4e-49
PRK05322387 PRK05322, PRK05322, galactokinase; Provisional 6e-32
PRK05101382 PRK05101, PRK05101, galactokinase; Provisional 2e-24
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 6e-17
PLN02865423 PLN02865, PLN02865, galactokinase 1e-15
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 1e-14
pfam0028867 pfam00288, GHMP_kinases_N, GHMP kinases N terminal 2e-14
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 3e-13
PTZ00298328 PTZ00298, PTZ00298, mevalonate kinase; Provisional 8e-13
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 2e-12
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 4e-12
pfam0854486 pfam08544, GHMP_kinases_C, GHMP kinases C terminal 5e-12
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 1e-09
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 2e-09
PTZ00290468 PTZ00290, PTZ00290, galactokinase; Provisional 6e-09
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 1e-08
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 1e-07
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 8e-06
COG4542293 COG4542, PduX, Protein involved in propanediol uti 9e-06
COG1685278 COG1685, COG1685, Archaeal shikimate kinase [Amino 5e-04
>gnl|CDD|215285 PLN02521, PLN02521, galactokinase Back     alignment and domain information 
 Score =  685 bits (1769), Expect = 0.0
 Identities = 283/377 (75%), Positives = 325/377 (86%), Gaps = 1/377 (0%)

Query: 6   HLWC-FVFFRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALM 64
           H W  +    YK  +E++K+KG+DVGPPVGLD++VDGTVPTGSGLSSS A VCS+ +A+M
Sbjct: 120 HKWGNYFICGYKGVFEFLKSKGVDVGPPVGLDVVVDGTVPTGSGLSSSAALVCSAAIAIM 179

Query: 65  AAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPA 124
           AA G+   KKE+AQ TC+CE+ IGTQSGGMDQAISIMA+ G A+LIDFNP+R TDVQLPA
Sbjct: 180 AALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQLPA 239

Query: 125 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEG 184
           GGTFV+A+SLAES KA+TAA+NYNNRVVECRL AIVLA+KLGM  +EAISKVKTLSDVEG
Sbjct: 240 GGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLGMSAEEAISKVKTLSDVEG 299

Query: 185 LCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQY 244
           LCV+FA  +GSSDP  AVKE L + PYTA +IE+I  E LTSIF NS +SL VL AAK +
Sbjct: 300 LCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHF 359

Query: 245 KLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEE 304
           KLHQRA HVYSEAKRVHAF+DTVSS+LSEE+KLKKLGDLMN+SH+SCSVLYECSCPELEE
Sbjct: 360 KLHQRAVHVYSEAKRVHAFRDTVSSSLSEEEKLKKLGDLMNESHYSCSVLYECSCPELEE 419

Query: 305 LVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLG 364
           LV VCR+NGALGARLTGAGWGGC VALVKE+I  QFIL LKE+FY+SRI++GVI   DLG
Sbjct: 420 LVKVCRDNGALGARLTGAGWGGCAVALVKEAIVPQFILALKEKFYKSRIEKGVIKEEDLG 479

Query: 365 LYVFASKPSSGAAKFKF 381
           LYVFASKPSSGAA  KF
Sbjct: 480 LYVFASKPSSGAAILKF 496

Length = 497
>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|232841 TIGR00131, gal_kin, galactokinase Back     alignment and domain information
>gnl|CDD|235407 PRK05322, PRK05322, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|179937 PRK05101, PRK05101, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215466 PLN02865, PLN02865, galactokinase Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215839 pfam00288, GHMP_kinases_N, GHMP kinases N terminal domain Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|240351 PTZ00298, PTZ00298, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|219894 pfam08544, GHMP_kinases_C, GHMP kinases C terminal Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|240347 PTZ00290, PTZ00290, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|226917 COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|224599 COG1685, COG1685, Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
PLN02521497 galactokinase 100.0
COG0153390 GalK Galactokinase [Carbohydrate transport and met 100.0
PLN02865423 galactokinase 100.0
PTZ00290468 galactokinase; Provisional 100.0
PRK05322387 galactokinase; Provisional 100.0
PRK05101382 galactokinase; Provisional 100.0
PRK00555363 galactokinase; Provisional 100.0
TIGR00131386 gal_kin galactokinase. The galactokinases found by 100.0
KOG0631489 consensus Galactokinase [Carbohydrate transport an 100.0
PRK03817351 galactokinase; Provisional 100.0
COG1577307 ERG12 Mevalonate kinase [Lipid metabolism] 100.0
PLN02677387 mevalonate kinase 100.0
TIGR00549273 mevalon_kin mevalonate kinase. Paracoccus exhibits 100.0
TIGR01220358 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ 100.0
PTZ00298328 mevalonate kinase; Provisional 100.0
PRK13412974 fkp bifunctional fucokinase/L-fucose-1-P-guanylylt 99.97
PRK03926302 mevalonate kinase; Provisional 99.97
COG2605333 Predicted kinase related to galactokinase and meva 99.97
KOG1511397 consensus Mevalonate kinase MVK/ERG12 [Lipid trans 99.96
PLN02451370 homoserine kinase 99.94
COG0083299 ThrB Homoserine kinase [Amino acid transport and m 99.92
PRK01212301 homoserine kinase; Provisional 99.91
TIGR00191302 thrB homoserine kinase. P.aeruginosa homoserine ki 99.9
TIGR01219454 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, 99.89
TIGR01920261 Shik_kin_archae shikimate kinase. This model repre 99.89
PTZ00299336 homoserine kinase; Provisional 99.88
PRK02534312 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.87
PRK01123282 shikimate kinase; Provisional 99.87
PRK03188300 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.87
PRK00128286 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.86
TIGR00144324 beta_RFAP_syn beta-RFAP synthase. This protein fam 99.84
TIGR00154293 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kin 99.81
PRK14608290 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.79
PRK14616287 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.79
PRK14614280 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.78
PRK14609269 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.78
PRK14611275 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.77
PRK14613297 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.75
PRK14615296 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.74
PRK14612276 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.74
COG1907312 Predicted archaeal sugar kinases [General function 99.73
PRK00343271 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.67
PRK14610283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.59
COG1685278 Archaeal shikimate kinase [Amino acid transport an 99.57
PRK00650288 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.57
PF0028867 GHMP_kinases_N: GHMP kinases N terminal domain; In 99.54
COG1947289 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-p 99.52
TIGR01240305 mevDPdecarb diphosphomevalonate decarboxylase. Alt 99.51
PF0854485 GHMP_kinases_C: GHMP kinases C terminal ; InterPro 99.45
PRK05905258 hypothetical protein; Provisional 99.37
KOG4644948 consensus L-fucose kinase [Carbohydrate transport 99.22
KOG1537355 consensus Homoserine kinase [Amino acid transport 99.06
PRK04181257 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.05
PLN02407343 diphosphomevalonate decarboxylase 98.94
COG3407329 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid 98.89
COG4542293 PduX Protein involved in propanediol utilization, 98.8
COG3890337 ERG8 Phosphomevalonate kinase [Lipid metabolism] 98.76
KOG2833395 consensus Mevalonate pyrophosphate decarboxylase [ 98.59
KOG4519459 consensus Phosphomevalonate kinase [Lipid transpor 98.54
COG1829283 Predicted archaeal kinase (sugar kinase superfamil 98.48
>PLN02521 galactokinase Back     alignment and domain information 
Probab=100.00  E-value=7.2e-65  Score=515.70  Aligned_cols=378  Identities=75%  Similarity=1.165  Sum_probs=329.3

Q ss_pred             CCCccchhh-hHHHHHHHHHHHcCCCCCCCCCeEEEEEcCCCCCCCCChhHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016879            4 LFHLWCFVF-FRYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCE   82 (381)
Q Consensus         4 ~~~~W~~yv-~~~~g~~~~l~~~~~~~~~~~g~~i~i~s~IP~g~GLGSSaA~~va~~~al~~~~g~~ls~~el~~la~~   82 (381)
                      +...|.+|+ ++++++++.+.+.+..++.+.||++.|.|+||+|+|||||||++||++.|++.+++.++++++++++|++
T Consensus       118 ~~~~W~nYv~~~~~gv~~~l~~~~~~~~~~~g~~i~i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~  197 (497)
T PLN02521        118 ANHKWGNYFICGYKGVFEFLKSKGVDVGPPVGLDVVVDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCK  197 (497)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhccccCCCCCeEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            446799999 9999999999987764323469999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhCCCCCcchhhhhhhccCCceEEeecCCCeeEEeecCCCcEEEEEeCCcchhhhhhcccchhhHHHHHHHHHHHHH
Q 016879           83 CEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLA  162 (381)
Q Consensus        83 ~E~~~g~~~g~~D~~~~~~Gg~~~~~~~~~~~~~~~~i~~~~~~~~ll~~s~~~~~~~~~~~~~y~~r~~e~~~a~~~l~  162 (381)
                      +|+++|.++|+|||+++++|+.|+++++||+++.++.+|+|.++.|+|++|+++++++.++++.||.|++||+.|+++|+
T Consensus       198 ~E~~~g~~~g~mDq~as~~g~~g~al~~d~~~l~~~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~  277 (497)
T PLN02521        198 CERHIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLA  277 (497)
T ss_pred             HhCccCCCCChHHHHHHHhcCCCcEEEEecCCCceEEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCchhhhhhcccchhhhhhhhhhhcCCCCCChhHHHHHhhhcCCCCHHHHHHHhhhhhhhhhhccCCchhHHhhhh
Q 016879          163 IKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAK  242 (381)
Q Consensus       163 ~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (381)
                      ++.++..++....+++|||+..++..+.+.....++.+.+++.+.+.+|+.+++...++..+.+++++.++...++...+
T Consensus       278 ~~~~~~~~~~~~~~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (497)
T PLN02521        278 VKLGMSAEEAISKVKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAK  357 (497)
T ss_pred             hhcCCcchhcccccCCHHHHHHHHhhhcccccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccc
Confidence            98887654322246789998765444445455556777888888888899999988876555555555444444444456


Q ss_pred             hHHHHHHHHHHHhHHHhHHHHHHHHhcCCCchHHHHHHHHHHHHHhHHhhhhccCCChHHHHHHHHHHhCCCcEEEEcCC
Q 016879          243 QYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGA  322 (381)
Q Consensus       243 ~~~~~~r~~~~~~E~~r~~~~~~al~~~~~~~~d~~~lg~lm~~sh~~lr~~~~vs~peld~l~~~a~~~Ga~Gak~sGa  322 (381)
                      ++.+++|++|+++|+.||.+++++|+++++++.+++.||++|+++|.++|++|++|||++|.|+++|++.|++|+|||||
T Consensus       358 ~~~l~~Ra~Hvv~E~~RV~~~~~al~~~~~~~~~~~~lg~lm~~sh~slr~~~~vS~~elD~lv~~a~~~Ga~GaRltGa  437 (497)
T PLN02521        358 HFKLHQRAVHVYSEAKRVHAFRDTVSSSLSEEEKLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGA  437 (497)
T ss_pred             hhHHhhhhhheecHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCCcEEEECCC
Confidence            67899999999999999999999999865445569999999999999999999999999999999999999999999999


Q ss_pred             CCcceEEEEEeCCcHHHHHHHHHHHHHhcccCCCcccCCCCcceEEEeeCCCceeeccC
Q 016879          323 GWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF  381 (381)
Q Consensus       323 G~GG~vi~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~v~~~  381 (381)
                      |||||+++|++++.++++++.+.+.|+++.+.++.+.+.++.+.+|+++|++||++++|
T Consensus       438 G~GG~~i~lv~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~~~~~  496 (497)
T PLN02521        438 GWGGCAVALVKEAIVPQFILALKEKFYKSRIEKGVIKEEDLGLYVFASKPSSGAAILKF  496 (497)
T ss_pred             CCCeEEEEEECHHHHHHHHHHHHHHHHhhccccccccccCCCCcEEEEecCCCceEeec
Confidence            99999999999999999999999999987643345556677899999999999999875

>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02865 galactokinase Back     alignment and domain information
>PTZ00290 galactokinase; Provisional Back     alignment and domain information
>PRK05322 galactokinase; Provisional Back     alignment and domain information
>PRK05101 galactokinase; Provisional Back     alignment and domain information
>PRK00555 galactokinase; Provisional Back     alignment and domain information
>TIGR00131 gal_kin galactokinase Back     alignment and domain information
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03817 galactokinase; Provisional Back     alignment and domain information
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>PLN02677 mevalonate kinase Back     alignment and domain information
>TIGR00549 mevalon_kin mevalonate kinase Back     alignment and domain information
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch Back     alignment and domain information
>PTZ00298 mevalonate kinase; Provisional Back     alignment and domain information
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information
>PRK03926 mevalonate kinase; Provisional Back     alignment and domain information
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism] Back     alignment and domain information
>PLN02451 homoserine kinase Back     alignment and domain information
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK01212 homoserine kinase; Provisional Back     alignment and domain information
>TIGR00191 thrB homoserine kinase Back     alignment and domain information
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch Back     alignment and domain information
>TIGR01920 Shik_kin_archae shikimate kinase Back     alignment and domain information
>PTZ00299 homoserine kinase; Provisional Back     alignment and domain information
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK01123 shikimate kinase; Provisional Back     alignment and domain information
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00144 beta_RFAP_syn beta-RFAP synthase Back     alignment and domain information
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Back     alignment and domain information
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>COG1907 Predicted archaeal sugar kinases [General function prediction only] Back     alignment and domain information
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2 Back     alignment and domain information
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase Back     alignment and domain information
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2 Back     alignment and domain information
>PRK05905 hypothetical protein; Provisional Back     alignment and domain information
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PLN02407 diphosphomevalonate decarboxylase Back     alignment and domain information
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] Back     alignment and domain information
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism] Back     alignment and domain information
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism] Back     alignment and domain information
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism] Back     alignment and domain information
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
2a2d_A478 X-Ray Structure Of Human N-Acetyl Galactosamine Kin 2e-61
2aj4_A548 Crystal Structure Of Saccharomyces Cerevisiae Galac 2e-45
3v5r_A505 Crystal Structure Of The Unliganded Form Of Gal3p L 2e-39
3v2u_C520 Crystal Structure Of The Yeast Gal Regulon Complex 3e-39
1pie_A419 Crystal Structure Of Lactococcus Lactis Galactokina 1e-13
2hfu_A332 Crystal Structure Of L. Major Mevalonate Kinase In 2e-10
1s4e_A352 Pyrococcus Furiosus Galactokinase In Complex With G 1e-09
2hfs_A332 Crystal Structure Of L. Major Mevalonate Kinase Len 2e-09
2cz9_A350 Crystal Structure Of Galactokinase From Pyrococcus 1e-08
2x7i_A308 Crystal Structure Of Mevalonate Kinase From Methici 2e-05
1wuu_A399 Crystal Structure Of Human Galactokinase Complexed 8e-05
1vis_A324 Crystal Structure Of Mevalonate Kinase Length = 324 2e-04
1kkh_A317 Crystal Structure Of The Methanococcus Jannaschii M 2e-04
>pdb|2A2D|A Chain A, X-Ray Structure Of Human N-Acetyl Galactosamine Kinase Complexed With Mn-Amppnp And N-Acetyl Glactosamine Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (593), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 211/349 (60%), Gaps = 31/349 (8%)
Query: 34  GLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGG 93
           G++ LVDG +P  SGLSSS+A VC + +  +   G  + K E+A++  + E++IGT+ GG
Sbjct: 149 GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGG 208
Query: 94  MDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVE 153
           MDQ+IS +A+ G A+LI+F+P+R TDV+LP+G  FV+A+S  E  KA  A S++N RV+E
Sbjct: 209 MDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKA--ATSHFNIRVME 266
Query: 154 CRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSS--DPVFAVKEFLRKEPY 211
           CRL A +LA    ++      KV  L +V+        K G S  + +   ++ L  EPY
Sbjct: 267 CRLAAKLLAKYKSLQ----WDKVLRLEEVQA-------KLGISLEEMLLVTEDALHPEPY 315
Query: 212 TALDIEKI----TEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTV 267
              +I +      EE  T I   S ++ DVL     +KL+QRA HVYSEA RV  FK   
Sbjct: 316 NPEEICRCLGISLEELRTQIL--SPNTQDVL----IFKLYQRAKHVYSEAARVLQFKKIC 369
Query: 268 SSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGC 327
               + E+ ++ LG+LMN SH SC  +YECSCPEL++LV++CR  GA G+RLTGAGWGGC
Sbjct: 370 EE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGC 427
Query: 328 VVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGA 376
            V++V       F+ N+ + +YQ R D  +         +FA+KP  GA
Sbjct: 428 TVSMVPADKLPSFLANVHKAYYQ-RSDGSLAPEKQ---SLFATKPGGGA 472
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548 Back     alignment and structure
>pdb|3V5R|A Chain A, Crystal Structure Of The Unliganded Form Of Gal3p Length = 505 Back     alignment and structure
>pdb|3V2U|C Chain C, Crystal Structure Of The Yeast Gal Regulon Complex Of The Repressor, Gal80p, And The Transducer, Gal3p, With Galactose And Atp Length = 520 Back     alignment and structure
>pdb|1PIE|A Chain A, Crystal Structure Of Lactococcus Lactis Galactokinase Complexed With Galactose Length = 419 Back     alignment and structure
>pdb|2HFU|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase In Complex With R-Mevalonate Length = 332 Back     alignment and structure
>pdb|1S4E|A Chain A, Pyrococcus Furiosus Galactokinase In Complex With Galactose, Adp And Magnesium Length = 352 Back     alignment and structure
>pdb|2HFS|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase Length = 332 Back     alignment and structure
>pdb|2CZ9|A Chain A, Crystal Structure Of Galactokinase From Pyrococcus Horikoshi Length = 350 Back     alignment and structure
>pdb|2X7I|A Chain A, Crystal Structure Of Mevalonate Kinase From Methicillin- Resistant Staphylococcus Aureus Mrsa252 Length = 308 Back     alignment and structure
>pdb|1WUU|A Chain A, Crystal Structure Of Human Galactokinase Complexed With Mgamppnp And Galactose Length = 399 Back     alignment and structure
>pdb|1VIS|A Chain A, Crystal Structure Of Mevalonate Kinase Length = 324 Back     alignment and structure
>pdb|1KKH|A Chain A, Crystal Structure Of The Methanococcus Jannaschii Mevalonate Kinase Length = 317 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 1e-108
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 9e-95
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 1e-63
1pie_A419 Galactokinase; galactose, galactosemia, transferas 2e-63
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 2e-59
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 1e-25
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 3e-15
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 6e-25
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 5e-16
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 8e-24
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 3e-17
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 3e-23
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 5e-16
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 3e-19
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 3e-12
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 2e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
3k17_A365 LIN0012 protein; protein structure initiative II(P 1e-11
3k17_A365 LIN0012 protein; protein structure initiative II(P 1e-09
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 4e-10
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478 Back     alignment and structure
 Score =  325 bits (834), Expect = e-108
 Identities = 138/365 (37%), Positives = 203/365 (55%), Gaps = 25/365 (6%)

Query: 21  YVKA------KGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKK 74
           Y         +   +    G++ LVDG +P  SGLSSS+A VC + +  +   G  + K 
Sbjct: 130 YFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKV 189

Query: 75  EIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSL 134
           E+A++  + E++IGT+ GGMDQ+IS +A+ G A+LI+F+P+R TDV+LP+G  FV+A+S 
Sbjct: 190 ELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSC 249

Query: 135 AESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNG 194
            E  KA  A S++N RV+ECRL A +LA    ++      KV  L +V+           
Sbjct: 250 VEMNKA--ATSHFNIRVMECRLAAKLLAKYKSLQWD----KVLRLEEVQAK-----LGIS 298

Query: 195 SSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVY 254
             + +   ++ L  EPY   +I +     L  +     S          +KL+QRA HVY
Sbjct: 299 LEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQD--VLIFKLYQRAKHVY 356

Query: 255 SEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGA 314
           SEA RV  FK       + E+ ++ LG+LMN SH SC  +YECSCPEL++LV++CR  GA
Sbjct: 357 SEAARVLQFKKICEE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGA 414

Query: 315 LGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSS 374
            G+RLTGAGWGGC V++V       F+ N+ + +YQ    R   +       +FA+KP  
Sbjct: 415 QGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQ----RSDGSLAPEKQSLFATKPGG 470

Query: 375 GAAKF 379
           GA   
Sbjct: 471 GALVL 475
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Length = 520 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350 Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Length = 395 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 100.0
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 100.0
1pie_A419 Galactokinase; galactose, galactosemia, transferas 100.0
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 100.0
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 100.0
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 100.0
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 100.0
3k17_A365 LIN0012 protein; protein structure initiative II(P 100.0
3gon_A335 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
4hac_A321 Mevalonate kinase; GHMP, ATP binding, phosphorylat 99.98
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 99.98
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 99.97
1h72_C296 HK, homoserine kinase; transferase, threonine bios 99.97
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 99.96
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 99.96
3hul_A298 HSK, HK, homoserine kinase; structural genomics, p 99.91
3pyf_A306 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.91
2gs8_A317 Mevalonate pyrophosphate decarboxylase; streptococ 99.9
3qt5_A332 Mevalonate diphosphate decarboxylase; GHMP kinase 99.89
2v8p_A271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.84
1uek_A275 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.84
1fi4_A416 Mevalonate 5-diphosphate decarboxylase; mixed alph 99.77
2ww4_A283 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 99.75
3lto_A323 Mevalonate diphosphate decarboxylase; protein stru 99.71
2hke_A380 Diphosphomevalonate decarboxylase, putative; meval 99.71
3f0n_A414 Mevalonate pyrophosphate decarboxylase; cholestero 99.62
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-62  Score=500.84  Aligned_cols=372  Identities=31%  Similarity=0.522  Sum_probs=308.9

Q ss_pred             CCCCccchhh-hHHHHHHHHHHHcCC---CCCCCCCeEEEEEcCCCCCCCCChhHHHHHHHHHHHHHHh---CCCCCHHH
Q 016879            3 PLFHLWCFVF-FRYKAFYEYVKAKGL---DVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAF---GVEVPKKE   75 (381)
Q Consensus         3 ~~~~~W~~yv-~~~~g~~~~l~~~~~---~~~~~~g~~i~i~s~IP~g~GLGSSaA~~va~~~al~~~~---g~~ls~~e   75 (381)
                      ++++.|.+|+ ++++++++++++.+.   ...+..||++.|.|+||.|+||  |||++||++.|++.++   +.++++.+
T Consensus       112 ~~~~~W~~Yv~g~i~~v~~~l~~~~~~~~~g~~~~G~~i~i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~~~  189 (520)
T 3v2u_C          112 PSVSEWSNYFKCGLHVAHSYLKKIAPERFNNTPLVGAQIFCQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISKKD  189 (520)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHCHHHHSSSCCCCEEEEEEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBHHH
T ss_pred             cccccHHHHHHHHHHHHHHHHHhhcccccccCCCCceEEEEecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCHHH
Confidence            4567899999 778888888876421   0012479999999999999999  9999999999999998   77899999


Q ss_pred             HHHHHHHhhhhhCCCCCcchhhhhhhccCCceEEeecCC-CeeEEeecCC----CcEEEEEeCCcchhhhhhcccchhhH
Q 016879           76 IAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNP-IRTTDVQLPA----GGTFVVAHSLAESLKAITAASNYNNR  150 (381)
Q Consensus        76 l~~la~~~E~~~g~~~g~~D~~~~~~Gg~~~~~~~~~~~-~~~~~i~~~~----~~~~ll~~s~~~~~~~~~~~~~y~~r  150 (381)
                      ++++|+++|+++|.+||+|||+++++|+.|+++++||++ +.++++|+|+    ++.|+|+||++.++++.+++++||.|
T Consensus       190 la~la~~aE~~vG~~~G~mDQ~as~~G~~g~~l~id~~~~l~~~~v~~p~~~~~~~~~vI~ns~v~~~k~~la~s~YN~R  269 (520)
T 3v2u_C          190 LTRITAVAEHYVGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFETAPTNYNLR  269 (520)
T ss_dssp             HHHHHTTGGGGGTCCCCSHHHHHHHHCBTTBEEEEECSSSCEEEEECCCCCSSCEEEEEEEECCCCCCHHHHTTTTHHHH
T ss_pred             HHHHHHHHHHHhCCCCchhhHHHHHhCCCCeEEEEEcCCCceeEEeeCCCccCCCeEEEEEECCCcccccccccchhhHH
Confidence            999999999999999999999999999999999999999 9999999987    89999999999888999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCch----hhhhhcccchhhhhhhhh--------hhcC-----CCCCChhHHHHHhhhc--CCC
Q 016879          151 VVECRLTAIVLAIKLGMKPQ----EAISKVKTLSDVEGLCVA--------FACK-----NGSSDPVFAVKEFLRK--EPY  211 (381)
Q Consensus       151 ~~e~~~a~~~l~~~~~~~~~----~~~~~~~~L~~~~~~~~~--------~~~~-----~~~~~~~~~v~~~~~~--~~~  211 (381)
                      ++||+.|+++|++++|+...    +......+||++...++.        |.++     .+..+|.+.+.+.+.+  .+|
T Consensus       270 r~eCe~Aa~~L~~~~g~~~~~~~~~~~~~~~sLRdv~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~y  349 (520)
T 3v2u_C          270 VIEVTVAANALATRYSVALPSHKDNSNSERGNLRDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGF  349 (520)
T ss_dssp             HHHHHHHHHHHHHHTTBCCCCCCSCSSCTTCCHHHHHHHHHHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHHHTTCTTCB
T ss_pred             HHHHHHHHHHHHHhhCCcccccccccccccccHHHHhHhhhhhccccccccccchhhHHHHHHHHHHHHHHHhhhccccc
Confidence            99999999999999887521    111123478887643321        1110     0112344555566654  379


Q ss_pred             CHHHHHHHhhhhhhhhhhccCCchhHHhhhhhHHHHHHHHHHHhHHHhHHHHHHHHhcCC--CchHHHHHHHHHHHHHhH
Q 016879          212 TALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNL--SEEDKLKKLGDLMNDSHH  289 (381)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~E~~r~~~~~~al~~~~--~~~~d~~~lg~lm~~sh~  289 (381)
                      |.+++...++.+.+++.++++...++  +.++|++++|++|+++|+.||.+++++|++++  ++++|++.||++|+++|.
T Consensus       350 t~~e~~~~l~~~~~~l~~~~l~~~~~--~~~~~~l~~RA~HVv~E~~Rv~~~~~al~~~~~~~~~~d~~~lg~lm~~sH~  427 (520)
T 3v2u_C          350 TVHEASTALNCSREEFTRDYLTTFPV--RFQVLKLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQA  427 (520)
T ss_dssp             CHHHHHHHTTSCHHHHHHHHTSSSCE--EESCBCHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHhhcCChhhhhhhhcccccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHHHHHHHH
Confidence            99999998886556665555655554  33456789999999999999999999999863  233579999999999999


Q ss_pred             HhhhhccCCChHHHHHHHHHHhCCCcEEEEcCCCCcceEEEEE---eCCcHHHHHHHHHHHHHhcccCCCcccCCCCcce
Q 016879          290 SCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALV---KESIDSQFILNLKEQFYQSRIDRGVINNNDLGLY  366 (381)
Q Consensus       290 ~lr~~~~vs~peld~l~~~a~~~Ga~Gak~sGaG~GG~vi~l~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  366 (381)
                      +||++|+||||++|.|+++|++.|++|+||||||||||+++|+   +++.+++++++|++.|+++++  |.++++++.+.
T Consensus       428 slr~~~~vS~peld~lv~~a~~~Ga~GarlTGaG~GGc~iaLv~~~~~~~~~~~~~~l~~~y~~~~~--~~~~~~~~~~~  505 (520)
T 3v2u_C          428 SCDKLYECSCIETNQICSIALANGSFGSRLTGAGWGGCTIHLVPSGANGNVEQVRKALIEKFYNVRY--PDLTDEELKDA  505 (520)
T ss_dssp             HHHHTSCCCCHHHHHHHHHHHHTTCSEEEECSSCSSSEEEEEEEESTTCSHHHHHHHHHHHTHHHHC--TTCCHHHHHHH
T ss_pred             HHHHhcCCCcHHHHHHHHHHHhCCCCEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHhccC--CccccccCCCe
Confidence            9999999999999999999999999999999999999999999   778999999999999998876  44455556789


Q ss_pred             EEEeeCCCceeecc
Q 016879          367 VFASKPSSGAAKFK  380 (381)
Q Consensus       367 ~~~~~p~~Ga~v~~  380 (381)
                      +|+|+|+.||+|+.
T Consensus       506 ~~~~~p~~GA~i~~  519 (520)
T 3v2u_C          506 IIVSKPALGTCLYE  519 (520)
T ss_dssp             EEECCCCCCSEEEE
T ss_pred             EEEecCCCceEEee
Confidence            99999999999975
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Back     alignment and structure
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A Back     alignment and structure
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei} Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Back     alignment and structure
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A* Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Back     alignment and structure
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} Back     alignment and structure
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A* Back     alignment and structure
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A Back     alignment and structure
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* Back     alignment and structure
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5 Back     alignment and structure
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2 Back     alignment and structure
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A* Back     alignment and structure
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Back     alignment and structure
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} Back     alignment and structure
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 381
d1piea2183 d.58.26.7 (A:214-396) Galactokinase {Lactococcus l 3e-23
d1s4ea2171 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyro 7e-23
d1wuua2176 d.58.26.7 (A:217-392) Galactokinase {Human (Homo s 1e-20
d1wuua1215 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi 1e-18
d1s4ea1176 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ 4e-18
d1piea1205 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lact 1e-17
d1kvka2169 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Ratt 5e-16
d1kkha2137 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon 3e-12
d1kkha1180 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Met 2e-11
d1kvka1225 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus 1e-10
d1k47a1194 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) 8e-07
d1k47a2135 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PM 5e-06
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 183 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

 Score = 93.2 bits (231), Expect = 3e-23
 Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 22/168 (13%)

Query: 212 TALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNL 271
           T LDI+ + E       AN+    D         L +RA H   E  R    +       
Sbjct: 36  TRLDIQSLGELSNEEFDANTDLIGDET-------LIKRARHAVYENNRTKIAQ-----KA 83

Query: 272 SEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCR-NNGALGARLTGAGWGGCVVA 330
                L K G+L+N SH S    YE +  EL+ L    +   G LGAR+TGAG+GGC +A
Sbjct: 84  FVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIA 143

Query: 331 LVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAK 378
           LV     S F   + + + +                 + ++  SG+ K
Sbjct: 144 LVAHDNVSAFRKAVGQVYEEVV---------GYPASFYVAQIGSGSTK 182
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 171 Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 176 Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176 Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 205 Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 169 Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 137 Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 180 Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 225 Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 194 Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 135 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1piea2183 Galactokinase {Lactococcus lactis [TaxId: 1358]} 100.0
d1s4ea2171 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 100.0
d1wuua2176 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1s4ea1176 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.9
d1piea1205 Galactokinase {Lactococcus lactis [TaxId: 1358]} 99.89
d1kvka2169 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.86
d1wuua1215 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.85
d1kkha1180 Mevalonate kinase {Archaeon Methanococcus jannasch 99.7
d1kkha2137 Mevalonate kinase {Archaeon Methanococcus jannasch 99.68
d1k47a2135 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.58
d1h72c1163 Homoserine kinase {Archaeon Methanococcus jannasch 99.51
d1kvka1225 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.51
d1k47a1194 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.5
d1h72c2133 Homoserine kinase {Archaeon Methanococcus jannasch 99.01
d1oj4a1163 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 98.67
d1ueka1148 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 98.61
d1fi4a1188 Mevalonate 5-diphosphate decarboxylase {Baker's ye 97.21
d1ueka2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 97.18
d1oj4a2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 95.62
d1fi4a2203 Mevalonate 5-diphosphate decarboxylase {Baker's ye 85.29
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=1.8e-37  Score=273.27  Aligned_cols=182  Identities=27%  Similarity=0.409  Sum_probs=155.4

Q ss_pred             CcEEEEEeCCcchhhhhhcccchhhHHHHHHHHHHHHHHHhCCCchhhhhhcccchhhhhhhhhhhcCCCCCChhHHHHH
Q 016879          125 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKE  204 (381)
Q Consensus       125 ~~~~ll~~s~~~~~~~~~~~~~y~~r~~e~~~a~~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~v~~  204 (381)
                      ++.|+|+||++   +|.++++.||.|+.||+.|++.+.+++++         ++|+++..                    
T Consensus         1 dy~lvi~dS~v---~h~L~~s~Yn~R~~ec~~a~~~v~~~~~~---------~~L~~v~~--------------------   48 (183)
T d1piea2           1 DYDIVIMNTNK---PRALTESKYNERFAETREALKRMQTRLDI---------QSLGELSN--------------------   48 (183)
T ss_dssp             TEEEEEEECCC---CCCTTCHHHHHHHHHHHHHHHHHHHHCCC---------SSGGGCCH--------------------
T ss_pred             CeEEEEEeCCC---CcCcCcchhHHHHHHHHHHHHHHHHhcCc---------chHhhhcH--------------------
Confidence            57899999999   45677889999999999999999888664         35666531                    


Q ss_pred             hhhcCCCCHHHHHHHhhhhhhhhhhccCCchhHHhhhhhHHHHHHHHHHHhHHHhHHHHHHHHhcCCCchHHHHHHHHHH
Q 016879          205 FLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLM  284 (381)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~E~~r~~~~~~al~~~~~~~~d~~~lg~lm  284 (381)
                               +++......                  -.+..+++|+.|+++|+.||.+++++|+++     |++.||++|
T Consensus        49 ---------~~l~~~~~~------------------l~d~~~~rRa~Hvv~En~Rv~~a~~al~~~-----d~~~~G~lm   96 (183)
T d1piea2          49 ---------EEFDANTDL------------------IGDETLIKRARHAVYENNRTKIAQKAFVAG-----NLTKFGELL   96 (183)
T ss_dssp             ---------HHHHHTGGG------------------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CHHHHHHHH
T ss_pred             ---------HHHHHHHhh------------------cCCHHHHHHHHHHHHHHHHHHHhhhhhhhc-----cHHHHHHHH
Confidence                     223222110                  011256899999999999999999999986     599999999


Q ss_pred             HHHhHHhhhhccCCChHHHHHHHHHHh-CCCcEEEEcCCCCcceEEEEEeCCcHHHHHHHHHHHHHhcccCCCcccCCCC
Q 016879          285 NDSHHSCSVLYECSCPELEELVNVCRN-NGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDL  363 (381)
Q Consensus       285 ~~sh~~lr~~~~vs~peld~l~~~a~~-~Ga~Gak~sGaG~GG~vi~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  363 (381)
                      ++||.+++++|++|||++|.|++.+++ .|++|+||||+|||||+++|++.+.++++++++++.|+++++         .
T Consensus        97 ~~Sh~sl~~~~evs~~elD~Lv~~a~~~~G~~GaRmtGgGfGGcvialv~~~~~~~~~~~i~~~y~~~~g---------~  167 (183)
T d1piea2          97 NASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVG---------Y  167 (183)
T ss_dssp             HHHHHHHHHTSCCCCHHHHHHHHHHHHSTTEEEEEECSSCSSSEEEEEEEGGGHHHHHHHHHHHHHHHHS---------S
T ss_pred             HHHHHHHHHHhcCCCchHHHHHHHHHHhCCCeEeeccccCCCceEEEEecHHHHHHHHHHHHHHHHHhhC---------C
Confidence            999999999999999999999999987 599999999999999999999999999999999999998774         3


Q ss_pred             cceEEEeeCCCceeec
Q 016879          364 GLYVFASKPSSGAAKF  379 (381)
Q Consensus       364 ~~~~~~~~p~~Ga~v~  379 (381)
                      .+.+|+++|++||+++
T Consensus       168 ~~~~~~~~~~~Ga~~i  183 (183)
T d1piea2         168 PASFYVAQIGSGSTKL  183 (183)
T ss_dssp             CCEEEECCBCCCSBCC
T ss_pred             CCcEEEEecCCCceeC
Confidence            6789999999999975
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure